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Seasonal Resource Selection And Habitat Treatment Use By A Fringe Population Of Greater Sage-Grouse, Rhett Boswell

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Movement and habitat selection by Greater Sage-grouse (Centrocercus uropasianus) is of great interest to wildlife managers tasked with applying conservation measures for this iconic western species. Current technology has created small and lightweight GPS (Global Positioning Systems) transmitters that can be attached to sage-grouse. Using GIS software and statistical programs such as Program R, land managers can analyze GPS location data to assess how sage-grouse are geospatially interacting with their habitats. Within the Panguitch Sage-Grouse Management Area (SGMA) thousands of acres of land have been restored or manipulated to enhance sage-grouse habitat; this usually involves removal of pinyon pine …

Data From: Target Sequence Capture Of Nuclear-Encoded Genes For Phylogenetic Analysis In Ferns, Paul G. Wolf, Tanner A. Robison, Matthew G. Johnson, Michael A. Sundue, Weston L. Testo, Carl J. Rothfels

Browse all Datasets

Premise of the study: Until recently, most phylogenetic studies of ferns were based on chloroplast genes. Evolutionary inferences based on these data can be incomplete because the characters are from a single linkage group and are uniparentally inherited. These limitations are particularly acute in studies of hybridization, which is prevalent in ferns; fern hybrids are common and ferns are able to hybridize across highly diverged lineages, up to 60 million years since divergence in one documented case. However, it not yet clear what effect such hybridization has on fern evolution, in part due to a paucity of available biparentally inherited …

Fifa: Exploring A Focally Induced Fault Attack Strategy In Near-Threshold Computing, Prabal Basu, Chidhambaranathan Rajamanikkam, Aatreyi Bal, Pramesh Pandey, Trevor Carter, Koushik Chakraborty, Sanghamitra Roy

Electrical and Computer Engineering Faculty Publications

In this letter, we explore the emerging security threats of near-threshold computing (NTC). Researchers have shown that the delay sensitivity of a circuit to supply voltage variation tremendously increases, as the circuit's operating conditions shift from traditional super-threshold values to NTC values. As a result, NTC systems become extremely vulnerable to timing fault attacks, jeopardizing trustworthy computing. Inspired by the operation of a polymorphic virus, we propose a novel threat model for NTC, referred to as a focally induced fault attack (FIFA). FIFA employs a machine learning framework to ascertain the circuit vulnerabilities and generates targeted software modules to cause …

Plant–Soil Feedback: Bridging Natural And Agricultural Sciences, Pierre Mariotte, Zia Mehrabi, T. Martijn Bezemer, Gerlinde B. De Deyn, Andrew Kulmatiski, Barbara Drigo, G.F. Ciska Veen, Marcel G.A. Van Der Heijden, Paul Kardol

Wildland Resources Faculty Publications

In both agricultural and natural systems, researchers have demonstrated large effects of plant-soil feedback (PSF) on plant growth. However, the concepts and approaches used in these two types of systems have developed, for the most part, independently. Here, we present a conceptual framework that integrates knowledge and approaches from these two contrasting systems. We use this integrated framework to demonstrate how (1) knowledge from complex natural systems can be used to increase agricultural resource-use efficiency and productivity and (2) research in agricultural systems can be used to test hypotheses and approaches developed in natural systems. Using this framework, we discuss …

Faculty Senate Executive Committee Agenda, December 11, 2017, Utah State University

Faculty Senate & Faculty Senate Executive Committee

• EPC December Report
• Council on Teacher Education (CTE) Annual Report
• Scholarship Advisory Board Annual Report
• Policy 405.11.4 External Peer Reviews (first reading)

Educational Policies Committee Agenda, December 7, 2017, Utah State University

Educational Policies Committee

• Curriculum Subcommittee
• Course approvals
• Program proposals
• Academic Standards Subcommittee
• General Education Subcommittee

Curriculum Subcommittee Agenda, December 7, 2017, Utah State University

Educational Policies Committee

Program Proposals

• Offering a Minor in Unmanned Aerial Systems
• Offering a Minor in Animal Biotechnology
• Dropping the BA in International Agribusiness and add emphasis areas to the existing BS in Agribusiness degree
• Offering an Agriculture and Natural Resources Pre-Law Minor
• Restructuring the BS into three separate BS degrees
• Establishing a Marketing and Strategic Department
• Offering a Bachelor’s Degree in Integrated Studies

Semester Course Approval Reviews

Other

• Zero Credit Classes
• R401 Updates
• Syllabus Update

Using Survey Data To Determine A Numeric Criterion For Nutrient Pollution, Paul Mark Jakus, Nanette Nelson, Jeffrey Ostermiller

Applied Economics Faculty Publications

We present a scientific replication of a benthic algae nuisance threshold study originally conducted in Montana, but we do so using a different sampling methodology in a different state. Respondents are asked to rate eight photographs that depict varying algae conditions. Our initial results show that Utah resident preferences for benthic algae levels are quite similar to those of Montana residents, thus replicating the Montana study. For the full Utah sample, though, Cronbach's α indicated poor internal consistency in rating the photographs, so a “monotonicity rule” was used to identify respondents providing monotonic preferences with respect to chlorophyll a densities. …

Usu Professor Elected To American Institute For Medical And Biological Engineering College Of Fellows | College Of Engineering, Usu College Of Engineering

College of Engineering News

Utah State University Professor of Biological Engineering Dr. Ron Sims was elected this week to the College of Fellows of the American Institute for Medical and Biological Engineering, or AIMBE.

The Utah Statesman, December 5, 2017, Utah State University

The Utah Statesman

Weekly student newspaper of Utah State University in Logan.

Fates Of Rare Species Under Siege From Invasion: Persistence Of Coccinella Novemnotata Herbst In Western North America Alongside An Invasive Congener, Edward W. Evans

Biology Faculty Publications

Species invading new geographic regions may threaten continued existence of similar, indigenous relatives, particularly those species whose rarity may reflect an already tenuous existence. The spectacular colonization of North America in recent decades by Coccinella septempunctata L. has generated widespread concern over potentially adverse effects on population viability of native species of ladybird beetles (Coccinellidae). Coccinella novemnotata Herbst in particular has been hypothesized to be at great risk, as this species apparently dwindled in numbers across much of North America during the twentieth century. Here results of sampling diverse habitats over three decades are examined to address the fate of …

The Value Of Native Plants And Local Production In An Era Of Global Agriculture, Oren Shelef, Peter J. Weisberg, Frederick D. Provenza

Wildland Resources Faculty Publications

For addressing potential food shortages, a fundamental tradeoff exists between investing more resources to increasing productivity of existing crops, as opposed to increasing crop diversity by incorporating more species. We explore ways to use local plants as food resources and the potential to promote food diversity and agricultural resilience. We discuss how use of local plants and the practice of local agriculture can contribute to ongoing adaptability in times of global change. Most food crops are now produced, transported, and consumed long distances from their homelands of origin. At the same time, research and practices are directed primarily at improving …

Utah State Engineer, Fall 2017, College Of Engineering

College of Engineering Magazines

Annual magazine for the College of Engineering at Utah State University.

Novel Statistical Models For Quantitative Shape-Gene Association Selection, Xiaotian Dai

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Other research reported that genetic mechanism plays a major role in the development process of biological shapes. The primary goal of this dissertation is to develop novel statistical models to investigate the quantitative relationships between biological shapes and genetic variants. However, these problems can be extremely challenging to traditional statistical models for a number of reasons: 1) the biological phenotypes cannot be effectively represented by single-valued traits, while traditional regression only handles one dependent variable; 2) in real-life genetic data, the number of candidate genes to be investigated is extremely large, and the signal-to-noise ratio of candidate genes is expected …

Direct Effects Of Warming Increase Woody Plant Abundance In A Subarctic Wetland, Lindsay G. Carlson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Climate change is expected to continue to cause large increases in temperature in Arctic and sub-Arctic ecosystems which has already resulted in changes to plant communities; for example, increased shrub biomass and range. It is important to understand how warmer temperatures could affect the plant community in a wetland system because this region provides crucial high-quality forage for migratory herbivores during the breeding season. One mechanism by which warming could cause change is directly, where warming influences the vital rates of a species; these effects may be either positive or negative. Warmer temperatures may also affect a species indirectly, by …

Longitudinal Thermal And Solute Dynamics In Regulated Rivers, Muhammad Rezaul Haider

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Dam releases increase river stage and can reverse groundwater movement into and out of the river. As the flood, thermal, and solute waves travel downstream in a regulated river, the size of the waves is anticipated to be affected both by river processes and exchanges with near river groundwater. This study established a modeling framework to quantify the influences of the groundwater exchanges on the temperatures and solute concentration dynamics along regulated rivers. The wave properties, volume of exchanges, conservative solute mass exchanges, and heat energy exchanges were calculated as a function of time and distance downstream. Results show that …

Ecology Of Greater Sage-Grouse Inhabiting The Southern Portion Of The Rich-Morgan-Summit Sage-Grouse Management Area, M. Brandon Flack

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Greater sage-grouse (Centrocercus urophasianus; sage-grouse) are sagebrush obligates and are therefore considered to be key indicators of sagebrush ecosystem health. Sage-grouse populations have declined range-wide over the last century due to loss and fragmentation of sagebrush (Artemisia spp.) habitats. Sage-grouse populations found in large intact sagebrush landscapes are considered to be more resilient, however, some small isolated populations persist and thrive in fragmented landscapes. Because of Utah’s unique topography and geography, sage-grouse habitat is discontinuous and populations are naturally dispersed throughout the state in suitable intact blocks or in disconnected islands of sagebrush habitat. Thus, Utah populations …

Water Surface Impact And Ricochet Of Deformable Elastomeric Spheres, Randy Craig Hurd

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Soft and deformable silicone rubber spheres ricochet from a water surface when rigid spheres and disks (or skipping stones) cannot. This dissertation investigates why these objects are able to skip so successfully. High speed cameras allow us to see that these unique spheres deform significantly as they impact the water surface, flattening into pancake-like shapes with greater area. Though the water entry behavior of deformable spheres deviates from that of rigid spheres, our research shows that if this deformation is accounted for, their behavior can be predicted from previously established methods. Soft spheres skip more easily because they deform significantly …

Oystershell Scale Impacts And Mitigation Options On The Kaibab And Coconino Nf’S, Amanda M. Grady

Aspen Bibliography

This report documents a site visit to evaluate aspen stands experiencing oystershell scale damage on the Kaibab and Coconino National Forest’s. The site visit was requested by Kaibab NF, foresters including; Josh Giles, Jessi Outzs, Michael Sedgeman, Woody Rokala and Coconino Silviculturist, Mark Nabel. On November 19, 2016, Amanda Grady accompanied the individuals listed above, to evaluate stand conditions within three aspen exclosures. Two were located on the Williams Ranger District, Kaibab NF in the vicinity of Spring Valley. The third exclosure was located on the Flagstaff RD, Coconino NF and accessed from HWY 89-A via the Pump House Wash …

Live Long And Prosper: Plant–Soil Feedback, Lifespan, And Landscape Abundance Covary, Andrew Kulmatiski, Karen H. Beard, Jeanette M. Norton, Justin Heavilin, Leslie E. Forero, Josephine Grenzer

Wildland Resources Faculty Publications

Plant soil feedbacks (PSFs) are thought to be important to plant growth and species coexistence, but most support for these hypotheses is derived from short-term greenhouse experiments. Here we use a seven-year, common garden experiment to measure PSFs for seven native and six nonnative species common to the western United States. We use these long-term, field-based estimates to test correlations between PSF and plant landscape abundance, species origin, functional type, and lifespan. To assess potential PSF mechanisms, we also measured soil microbial community composition, root biomass, nitrogen cycling, bulk density, penetration resistance, and shear strength. Plant abundance on the landscape …

Testing The Effectiveness Of Two Natural Selection Simulations In The Context Of A Large‑Enrollment Undergraduate Laboratory Class, Denise S. Pope, Caleb M. Rounds, Jody Clarke-Midura

Instructional Technology and Learning Sciences Faculty Publications

Background: Simulations can be an active and engaging way for students to learn about natural selection, and many have been developed, including both physical and virtual simulations. In this study we assessed the student experience of, and learning from, two natural selection simulations, one physical and one virtual, in a large enrollment introductory biology lab course. We assigned students to treatments (the physical or virtual simulation activity) by section and assessed their understanding of natural selection using a multiple-choice pre-/post-test and short-answer responses on a post-lab assignment. We assessed student experience of the activities through structured observations and an affective …

Nitrogen Availability And Use Efficiency In Corn Treated With Contrasting Nitrogen Sources, Avneet Kakkar

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The plant-soil nitrogen cycle plays a significant role in allocation of available N to plants, and improved understanding of N cycling helps sustainably increase fertilizer use efficiency. There are various processes (nitrogen mineralization and nitrification) involved in the availability and mobility of nitrogen in the soil. The primary objective of this study was to determine the NUE under contrasting nitrogen treatments over a period of five years. Additionally, we examined the effect of different N treatments on N mineralization and nitrification in conventional and organic farming systems.

This project was funded by Agriculture and Food Research Initiative Competitive Grants Program …

Optimizing Bioengineered Vascular Systems: A Genetic Algorithm Approach, Sima Mehri Kochaki

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Efficiency of current cell cultures producing biological products is limited due to accumulation of the product and waste on the cells. A previous work aims at assisting bioengineers in solving this problem by introducing a new set of cells which possess the ability to connect to one another and thus form a network. Once created, the network of cells can help the initial cellules by removing their waste and product as well as nourishing them. Our project explores a technique to be able to create the best network of such cells; hence maximizing the amount of metabolic product in the …

Integrating Social And Ecological Methods To Assess And Inform Park Monitoring And Management, Kelly A. Goonan

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Managing outdoor recreation requires that managers do the following: (1) consider the user experience, environmental and cultural resources, and type and intensity of management actions; (2) specify desired conditions to be maintained, monitor conditions, and take appropriate action if unacceptable impacts occur; (3) adapt to new conditions and information; and (4) exercise good judgment based on their professional experience and the best information available to them. Social science studies of visitors and studies of significant recreation resources like campsites are important sources of information for managers and are commonly used in parks and protected areas to support planning and decision-making. …

Mechanistic Studies Of The Iron And Molybdenum Nitrogenases, Derek Harris

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

As a basic building block in many biological molecules the element nitrogen (N) is essential for life. Dinitrogen (N2) is abundant in Earth’s atmosphere, but this form is biologically unavailable. To be biologically available N2 must undergo an energy demanding reduction reaction to the fixed form, ammonia (NH3). The industrial Haber-Bosch process, which accounts for approximately 50% of the worlds fixed nitrogen, uses energy from fossil fuels to achieve high pressures and temperatures to facilitate the reaction. The energy used by Haber-Bosch accounts for approximately 2% of the world’s annual supply. The remainder of fixed nitrogen is produced biologically by …

Foundations Of Translational Ecology, Carolyn Af Enquist, Stephen T. Jackson, Gregg M. Garfin, Frank W. Davis, Leah R. Gerber, Jeremy A. Littell, Jennifer L. Tank, Adam J. Terando, Tamara U. Wall, Benjamin Halpern, J. Kevin Hiers, Toni Kyn Morelli, Elizabeth Mcnie, Nathan L. Stephenson, Matthew A. Williamson, Connie A. Woodhouse, Laurie Yung, Mark W. Brunson, Kimberly R. Hall, Lauren M. Hallett, Dawn M. Lawson, Max A. Mortiz, Koren Nydick, Amber Pairis, Andrea J. Ray, Claudia Regan, Hugh D. Safford, Mark W. Schwartz, M. Rebecca Shaw

Environment and Society Faculty Publications

Ecologists who specialize in translational ecology (TE) seek to link ecological knowledge to decision making by integrating ecological science with the full complement of social dimensions that underlie today's complex environmental issues. TE is motivated by a search for outcomes that directly serve the needs of natural resource managers and decision makers. This objective distinguishes it from both basic and applied ecological research and, as a practice, it deliberately extends research beyond theory or opportunistic applications. TE is uniquely positioned to address complex issues through interdisciplinary team approaches and integrated scientist–practitioner partnerships. The creativity and context-specific knowledge of resource managers, …

Developing A Translational Ecology Workforce, Mark W. Schwarts, J. Kevin Hiers, Frank W. Davis, Gregg M. Garfin, Stephen T. Jackson, Adam J. Terando, Connie A. Woodhouse, Toni Lyn Morelli, Matthew A. Williamson, Mark W. Brunson

Environment and Society Faculty Publications

We define a translational ecologist as a professional ecologist with diverse disciplinary expertise and skill sets, as well as a suitable personal disposition, who engages across social, professional, and disciplinary boundaries to partner with decision makers to achieve practical environmental solutions. Becoming a translational ecologist requires specific attention to obtaining critical non-scientific disciplinary breadth and skills that are not typically gained through graduate-level education. Here, we outline a need for individuals with broad training in interdisciplinary skills, use our personal experiences as a basis for assessing the types of interdisciplinary skills that would benefit potential translational ecologists, and present steps …

Heritable Sperm Chromatin Epigenetics: A Break To Remember, Ralph G. Meyer, Chelsea C. Ketchum, Mirella L. Meyer-Ficca

UAES Publications

Sperm chromatin not only has a unique structure to condense and protect the paternal DNA in transit, but also provides epigenetic information that supports embryonic development. Most of the unique sperm nuclear architecture is formed during the sweeping postmeiotic chromatin remodeling events in spermiogenesis, where the majority of nucleosomes are removed and replaced by protamines. The remaining histones and other chromatin proteins are located in structurally and transcriptionally relevant positions in the genome and carry diverse post-translational modifications relevant to the control of embryonic gene expression. How such postmeiotic chromatin-based programming of sperm epigenetic information proceeds, and how susceptible the …

Urban Bobcat (Lynx Rufus) Ecology In The Dallas-Fort Worth, Texas Metroplex, Julie M. Golla

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Urban landscapes are quickly replacing native habitat around the world. As wildlife and people increasingly overlap in their shared space and resources, so does the potential for human-wildlife conflict, especially with predators. Bobcats (Lynx rufus) are a top predator in several urban areas across the United States and a potential contributor to human-carnivore conflicts. This study evaluated the movements and habitat use of bobcats in the Dallas-Fort Worth (DFW), Texas metroplex. Spatial data were collected from 10 bobcats via Global Positioning Satellite (GPS) for approximately one year. Average home range size was 4.60 km² (n=9, SE=0.99 km …

Rancher Perceptions Of Ecosystem Services From Rangelands Of The Intermountain West, Elisabeth C. York

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Rangelands within the Great Basin are responsible for the provision of multiple resources that humans depend on for a variety of reasons. Ranchers in this region are dependent on public lands to remain economically viable in their cattle operations. As a majority of land in this region is publically owned, there are varying interests at play in what should and could be the focus of management. Ranchers are charged with implementing strategies aimed at conserving these landscapes and their motivations for what to manage may significantly influence resource provision from Intermountain West ecosystem.

In this study, I sought to understand …