Digital Commons Network^™

Soil Health On Utah's Farms And Ranches, Jenae Dean

All Graduate Theses and Dissertations, Fall 2023 to Present

The term soil health has gained popularity in agriculture due to prolonged droughts, rising food costs, and the growing public concern for sustainable and organic practices. Soil health practices can offer solutions to all of these pressures. This thesis provides Utah's farmers and ranchers with quantifiable data on implementing soil health practices in Utah's unique climate. It presents the first two years of on-farm trial results on yield and quality after implementing various soil health practices on five categories of crops: corn, mixed hay, alfalfa, produce, and dryland grain. Over a two-year period, none of the soil health practices resulted …

Optimization And Utilization Of Microbial Electrolysis Cells In Waste To Product Applications, Hayden Harrison

All Graduate Theses and Dissertations, Fall 2023 to Present

As the world searches for cleaner and more sustainable energy solutions, turning waste into fuel is an increasingly attractive strategy. This research focuses on microbial electrolysis cells, a new technology that uses bacteria and a small amount of electricity to convert organic waste—like food scraps or wastewater—into useful gases such as hydrogen and methane. These gases can be used as energy sources to reduce dependency on more traditional fuels.

This thesis tackles two key challenges that limit the real-world use of microbial electrolysis systems. First, it introduces a simpler and more effective method to stop hydrogen losses in single-chamber cells. …

The Socioecology Of Indigenous Archaeological Maize In The Uinta Basin, Utah, Sara Saouma

All Graduate Theses and Dissertations, Fall 2023 to Present

This thesis investigates the phenotypic variability of maize (Zea mays spp.) from archaeological sites located in the Uinta Basin, Utah. Maize was first introduced to the American Southwest around 5,000 years ago following its migration via trade routes from its native region of southern Mexico (Vint 2017). The adaptation of maize to the arid and temperate conditions of the American Southwest and Mexico triggered significant phenotypic change resulting from human and environmental selection pressures. This thesis focuses on the analysis of uncharred maize cobs from seven archaeological sites in the Uinta Basin. The analysis includes 70 corn cobs—most …

Population Analysis Of Cyanobacteria In Rotating Algal Biofilm Reactors, Eric H. Matthews

All Graduate Theses and Dissertations, Fall 2023 to Present

Algal biofilms have numerous applications in wastewater treatment and bioproduct production. The Sustainable Waste-to-Bioproducts Engineering Center at Utah State University is working to develop rotating algal biofilm reactors (RABRs) to remove excess nitrogen and phosphorus from wastewater effluent while producing biomass for downstream production.

Genetic analysis of algal biofilms on various RABRs was performed to gain improved understanding of the biofilm populations. This analysis focuses on a pilot-scale RABR and how it compares to several other RABRs. Additionally, old methods of genetic analysis filtered out important cyanobacterial populations. A new method was developed to identify the cyanobacteria within the biofilms. …

Modeling For Functional Traits In Bluebunch Wheatgrass Using Unmanned Aerial Vehicle (Uav) High-Throughput Phenotyping, Brittany L. Johnson

All Graduate Theses and Dissertations, Fall 2023 to Present

Changing climates and shifts in community composition in the Intermountain West threaten sagebrush-steppe ecosystems, impacting both plants and animals. Restoring native grasses like bluebunch wheatgrass (Pseudoroegneria spicata; BBWG) can help ecosystems resist invasive species and recover from stress and disturbances. As a native cool-season grass, BBWG is widely used in rangeland restoration for the western U.S. Breeding programs for restoration plant materials, such as seeds for ecological projects, often require years or decades of field testing while facing staffing constraints. High- throughput phenotyping (HTP), which rapidly measures observable plant traits, offers a faster solution using drones to capture time-series …

Supplementing Tannins To Increase Performance And Reduce Methane Emissions In Cows Grazing On Western Grasslands, Horacio Pedro Blanchard

All Graduate Theses and Dissertations, Fall 2023 to Present

Cattle grazing on U.S. rangelands often rely on a limited diet made up mostly of grasses. As the seasons change from spring to fall, the nutritional quality of these grasses declines, leading to less efficient digestion and higher production of methane—a potent greenhouse gas. In addition, most grass-based pastures lack beneficial plant compounds, such as tannins.

This study explored whether adding natural tannins—specifically, condensed and hydrolyzable tannins from quebracho and chestnut trees—to the diet of grazing cattle could improve how the use efficiency of nutrients and reducing methane emissions from cattle. Over two years, 24 cow-calf pairs grazed in small …

A Value Sensitive Design Approach To Reimagining Parental Control Apps, Prakriti Dumaru

All Graduate Theses and Dissertations, Fall 2023 to Present

Parental control apps are often used by families to regulate children's device usage and keep them safe online. However, existing tools focus on monitoring and restricting children, which can lead to tension and mistrust within families. This research takes a new approach by exploring how parental control apps can be redesigned to support positive family values, like encouraging open communication between parents and children and helping children self-regulate their behaviors. Through four in-depth studies, this dissertation looks at how these values play out in different real-life situations. It includes families with children on the autism spectrum, divorced households where parents …

Potential Impact Of Dotted Paropsine Beetle And Other Leaf Beetles On Eucalyptus In Utah, Marion Murray, Victoria Xiong, Megan Kast

All Current Publications

Dotted paropsine leaf beetle (DPLB) is an invasive eucalyptus pest native to Australia. Its first U.S. detection was in California in 2022. DPLB feeds on several eucalyptus species, with blue gum as its primary host. Feeding damage includes semicircular notches on leaf edges, defoliation of young leaves, and dieback of shoot tips. DPLB poses a threat to eucalyptus plantings across the western U.S. and to cut foliage producers in Utah.

Cocoa Polyphenols Alter The Fecal Microbiome Without Mitigating Colitis In Mice Fed Healthy Or Western Basal Diets, Eliza C. Stewart, Mohammed F. Almatani, Marcus Hayden, Giovanni Rompato, Jeremy Case, Samuel Rice, Korry J. Hintze, Abby D. Benninghoff

Animal, Dairy, and Veterinary Science Student Research

Background/Objectives: Chronic inflammation and Western-style diets elevate colorectal cancer (CRC) risk, particularly in individuals with colitis, a feature of inflammatory bowel disease (IBD). Diets rich in polyphenol-containing functional foods, such as cocoa, may reduce gut inflammation and modulate the gut microbiome. This study investigated the impact of cocoa polyphenol (CP) supplementation on inflammation and microbiome composition in mice with colitis, fed either a healthy or Western diet, before, during, and after the onset of disease. We hypothesized that CPs would attenuate inflammation and promote distinct shifts in the microbiome, especially in the context of a Western diet. Methods: …

Uptake, Distribution, And Activity Of Pluronic F68 Adjuvant In Wheat And Its Endophytic Bacillus Isolate, Anthony Cartwright, Mohammad Zargaran, Anagha Wankhade, Astrid Jacobson, Joan E. Mclean, Anne J. Anderson, David W. Britt

Biological Engineering Student Research

Surfactants are widely utilized in agriculture as emulsifying, dispersing, anti-foaming, and wetting agents. In these adjuvant roles, the inherent biological activity of the surfactant is secondary to the active ingredients. Here, the hydrophilic non-ionic surface-active tri-block copolymer Pluronic^® F68 is investigated for direct biological activity in wheat. F68 binds to and inserts into lipid membranes, which may benefit crops under abiotic stress. F68’s interactions with Triticum aestivum (var Juniper) seedlings and a seed-borne Bacillus spp. endophyte are presented. At concentrations below 10 g/L, F68-primed wheat seeds exhibited unchanged emergence. Root-applied fluorescein-F68 (fF68) was internalized in root epidermal cells and …

Changing Aspen Stand Structure Following Large Carnivore Restoration In Yellowstone, Luke E. Painter, Robert L. Beschta, William J. Ripple

Aspen Bibliography

Restoration of large carnivores in northern Yellowstone National Park in the late 20th century resulted in a sustained reduction of Rocky Mountain elk (Cervus canadensis) and their herbivory, facilitating new growth of quaking aspen (Populus tremuloides) saplings. In 2020–21, we examined 87 randomly selected, previously sampled aspen stands across northern Yellowstone, combining random plots with stand-wide observations. Forty-three percent of stands contained a new cohort of small trees (5–10 cm dbh), the first documented recruitment of overstory aspen trees in northern Yellowstone since the 1940s. Both aspen saplings ( ≥2 m tall) and small trees were …

Canopy Insect Communities Are Shaped By The Genes And Phenotypes Of Their Aspen Hosts, Clay J. Morrow, Jennifer Lind-Riehl, Christopher T. Cole, Kennedy Rubert-Nason, Cécile Ané, Richard L. Lindroth

Aspen Bibliography

1. Community genetics research aims to identify genetic and phenotypic mechanisms that shape communities as extended phenotypes. To date, most progress has been made identifying variation in herbivore communities associated with intraspecific variation in plants, with little focus on identifying specific genes or traits responsible for that variation. Here, we identify how extended phenotype variation of a foundation tree species, Populus tremuloides, arises from trait variation among individuals and specific genes. 2. We quantified heritability for 13 tree traits -- including phenology, defense chemistry, reproduction, and morphology -- and for 18 associated insect species (640,557 individuals). We performed genomic …

Post-Wildfire Erosion And Sedimentation: An Escalating Threat For Utah Fisheries, Colton James, Kendall Becker, Scott Hotaling, Aish Chandrasekaran, Alex Fiedler, Timothy E. Walsworth, Patrick Belmont

All Current Publications

Wildfires are a natural part of the western U.S. landscape and provide numerous benefits, including enhanced nutrient cycling and habitat rejuvenation. Utah’s fish populations evolved with wildfire as a common disturbance. However, the increasing size and severity of wildfires, combined with Utah’s heavily engineered and fragmented stream networks, pose a contemporary risk to fish populations. This fact sheet reviews wildfire impacts on erosion and Utah's watersheds and fisheries. It outlines measures we can take to prevent post-wildfire fish die-offs.

"...Anything My Friend Shares, I Would Want To Support Them By Clicking On It": Co-Designing Story-Based Interventions Against Clickbait For Teenagers, Ankit Shrestha, Audrey Flood, Bryson Hackler, Mahdi Nasrullah Al-Ameen

Computer Science Student Research

Teenagers' lack of digital sophistication and cyber hygiene makes them vulnerable to social engineering attacks, especially as they start using social media. Clickbait, one of such attacks, is primarily performed through social media to trick users into clicking on malicious links. With teenagers' increasing use of social media, clickbait poses a substantial threat to their online safety. The existing online safety measures for teens mainly focus on parental mediation, which can be perceived as restrictive and privacy-invasive. To this end, researchers recommended empowering teens to deal with online risks. In order to design such interventions for clickbait, we conducted co-design …

The Effects Of A Combined Exercise Intervention On Body Composition, Gdf-15, Apelin-12, And Il-15 Among Older Korean Women According To Obesity Status, Jeongsook Kim, Eadric Bressel, Minkyo Kim, Taekyu Kim, Suhan Koh, Doyeon Kim

Kinesiology and Health Science Faculty Publications

Background: The purpose of this study was to investigate the effects of a 16-week exercise program combining aerobic and resistance training on body composition, growth differentiation factor-15 (GDF-15), apelin-12, and interleukin-15 (IL-15) in older Korean women according to obesity status. Methods: Participants were divided into obesity (n = 15) and normal-weight groups (n = 14). A walking exercise was performed at 60–70% heart rate reserve (RPE 13–15). The bodyweight resistance exercises were progressively intensified over 16 weeks. Analysis methods included two-way repeated measures ANOVA, ANCOVA, and paired and independent t-tests. Results: Significant main effects of time and …

The Potential Of Microbial Fuel Cells As A Dual Solution For Sustainable Wastewater Treatment And Energy Generation: A Case Study, Shajjadur Rahman Shajid, Monjur Mourshed, Md. Golam Kibria, Bahman Shabani

Mechanical and Aerospace Engineering Student Publications and Presentations

Microbial fuel cells (MFCs) are bio-electrochemical systems that harness microorganisms to convert organic pollutants in wastewater directly into electricity, offering a dual solution for sustainable wastewater treatment and renewable energy generation. This paper presents a holistic techno-economic and environmental feasibility assessment of largescale MFC deployment in Dhaka’s industrial zone, Bangladesh, as a relevant case study. Here, treating 100,000 cubic meters of wastewater daily would require a capital investment of approximately USD 500 million, with a total project cost ranging between USD 307.38 million and 1.711 billion, depending on system configurations. This setup has an estimated theoretical energy recovery of 478.4 …

A Sweetgrass Method Of Bullying Prevention For American Indian/Alaska Native Part 2, M. Standing Eagle Baez Ph.D., C. Allison Baez Ph.D.

Journal of Indigenous Research

Bullying is widespread in the United States. Bullying negatively impacts all youth involved, including those who are bullied, those who bully others, and those who witness bullying, known as bystanders. The Sweetgrass Method (SGM) is a culturally responsive framework that empowers Native and non-Native practitioners working with American Indian/Alaska Native clients. The method focuses on the initial dialogue of building a healthy relationship through self-reflection, communication, and continuity. The SGM looks at weaving Western and traditional approaches into a tailored approach that is culturally responsive to the individuals they serve. The SGM provides a framework by weaving the three strands: …

Discrete Time Series Forecasting In Non-Invasive Monitoring Of Managed Honey Bee Colonies: Part Ii: Are Hive Weight And In-Hive Temperature Seasonal And Colony-Specific, Vladimir A. Kulyukin, Aleksey V. Kulyukin, William G. Meikle

Computer Science Faculty and Staff Publications

We explored the stationarity, trend, and seasonality of the hive weight and in-hive temperature of ten managed honey bee (Apis mellifera) colonies at a research apiary of the Carl Hayden Bee Research Center in Tucson, Arizona, USA. The hives were monitored with electronic scales and in-hive temperature sensors from June to October 2022. The weight and temperature were recorded every five minutes around the clock. The collected data were curated into 2160 timestamped weight and 2160 timestamped temperature observations. We performed a systematic autoregressive integrated moving average (ARIMA) time series analysis to answer three fundamental questions: (a) Does …

Salinity And Moisture Influence Co2 And Ch4 Emissions From High-Latitude Coastal Soils, B. N. Barr, K. C. Kelsey, A. J. Leffler, M. Petit Bon, K. H. Beard

Wildland Resources Faculty Publications

Sea level rise and more frequent and larger storms will increase saltwater flooding in coastal terrestrial ecosystems, altering soil-atmosphere CO₂ and CH₄ exchange. Understanding these impacts is particularly relevant in high-latitude coastal soils that hold large carbon stocks but where the interaction of salinity and moisture on greenhouse gas flux remains unexplored. Here, we quantified the effects of salinity and moisture on CO₂ and CH₄ fluxes from low-Arctic coastal soils from three landscape positions (two Wetlands and Upland Tundra) distinguished by elevation, flooding frequency, soil characteristics, and vegetation. We used a full factorial laboratory incubation experiment …

Bigapp: A User-Friendly Genomic Tool Kit Identified Quantitative Trait Loci For Creeping Rootedness In Alfalfa (Medicago Sativa L.), Alexander M. Sandercock, Michael D. Peel, Cristiane H. Taniguti, Josué Chinchilla-Vargas, Shufen Chen, Manoj Sapkota, Meng Lin, Dongyan Zhao, Arlyn J. Ackerman, Bhoja R. Basnet, Craig T. Beil, Moira J. Sheehan

Plants, Soils and Climate Student Research

Alfalfa (Medicago sativa L.) is a globally vital forage crop valued for its perennial growth and multiple annual harvests. A breeding effort is underway to improve the crop for productivity and persistence against biotic and abiotic stresses using “creeping rootedness,” a trait where plants exhibit horizontal root growth, similar to rhizomes, with increased vegetative ground surface area. In this study, we genotyped a breeding population of 648 alfalfa lines segregating for creeping rootedness using the 3K DArTag marker panel to identify trait-associated genomic loci and evaluate the feasibility of genomic prediction to accelerate breeding cycles. Using genome-wide association studies …

Aspen Impedes Wildfire Spread In Southwestern United States Landscapes, Matthew P. Harris, Jonathan D. Coop, Jared A. Balik, Jessika R. Mcfarland, Sean A. Parks, Camille S. Stevens-Rumann

Aspen Bibliography

Aspen (Populus tremuloides) forests are generally thought to impede fire spread, yet the extent of this effect is not well quantified in relation to other vegetation types. We examined the influence of aspen cover on interpolated daily fire spread rates, the relative abundance of aspen at fire perimeters versus burn interiors, and whether these relationships shifted under more fire-conducive atmospheric conditions. Our study incorporated 314 fires occurring between 2001 and 2020 in the southwestern United States and a suite of gridded vegetation, topography, and fire weather predictor variables. We found that aspen slows fire progression: as aspen cover …

Dynamic Microbiome Responses To Structurally Diverse Anthocyanin-Rich Foods In A Western Diet Context, Mohammed F. Almatani, Giovanni Rompato, Eliza C. Stewart, Marcus Hayden, Jeremy Case, Samuel Rice, Korry J. Hintze, Abby D. Benninghoff

Animal, Dairy, and Veterinary Science Student Research

Background/Objectives: Anthocyanin (ACN)-rich foods are known to influence the gut microbiota composition, but the temporal dynamics and structural specificity of these effects remain poorly understood. This study investigated how distinct ACN-rich fruit supplements impact the gut microbiome over time in the context of a Western-style diet. We hypothesized that ACN-induced microbial shifts would occur rapidly, differ by ACN source, and require continued intake to persist. Methods: C57BL/6J mice were fed the total Western diet (TWD) supplemented with freeze-dried powders from bilberry (BB), tart cherry (TC), chokeberry (CB), elderberry (EB), black currant (BC), or black raspberry (BRB) for 0, 1, 3, …

Barrier Removal Is A Strategy For Climate Resilience, Sarah E. Null, William Bosen, Gregory Goodrum

Watershed Sciences Faculty Publications

Millions of dams and in-stream barriers have been built worldwide to manage water supply, reduce flood risk, generate hydropower, and support recreation, navigation, and road infrastructure. The National Aquatic Barrier Inventory estimates over 550,000 dams and over 298,000 road-related barriers that fragment streams in the United States¹. As dams age and as droughts and floods become more intense, some dams and barriers have become problems, for example, by outliving their useful life, presenting safety concerns to communities, and impacting ecosystems, especially in a changing climate. These dams – the ones that present safety concerns due to their age …

Utah Women And Mental Health: A 2025 Update, Sadie Wilde, Chloe Bhowmick, Kolene Anderson, Susan R. Madsen

Marketing and Strategy Faculty Publications

According to the World Health Organization, “mental health is a state of well-being that enables people to cope with the stresses of life, realize their abilities, learn well and work well, and contribute to their community.”¹ Based on a 2025 ranking from WalletHub, Utah is the 4th “Happiest” state in the nation, so one might draw the conclusion that Utahns experience good mental health. However, the rankings also reveal that Utah does not perform as well in the “Emotional & Physical Well-Being” category (in 27th place).² Because mental health is an important indicator of overall well-being, this report …

The Untapped Power Of Citizen Science: A Survey Of Utah Residents, Wesley Crump, Elizabeth Cohen, Shital Poudyal

Outcomes and Impact Quarterly

Citizen Science is an approach to involve the public in the scientific process to address locally relevant needs. A survey was conducted to explore Utahns’ relationship with citizen science. Results show a gap between respondents’ past participation and willingness to participate in citizen science, indicating an opportunity for USU Extension to strengthen its relationship with the public through citizen science.

Pollination And Essential Oil Production Of Lavandula Angustifolia Mill. (Lamiaceae), Riley B. Jackson, Tyler M. Wilson, Joseph S. Wilson, Zabrina Ruggles, Lindsey Topham Wilson, Chris Packer, Jacob G. Young, Christopher R. Bowerbank, Richard E. Carlson

Biology Faculty Publications

Lavandula angustifolia Mill., lavender, is an aromatic plant in the Lamiaceae family. Lavender, which is native to the Mediterranean region but cultivated throughout the world, is an important economic plant. Several studies have investigated two aspects of this aromatic plant: (1) which pollinators, particularly bees, pollinate lavender, and (2) the composition of lavender essential oil. However, little research has been conducted to investigate how pollination affects either the yield or phytochemistry of lavender. The current study, which was conducted in North America, investigates which bee species visit lavender and how pollination affects plant chemistry, specifically the essential oil produced by …

Basic Rabbit Selection And Breeding Considerations, Joseph Okoh, Jessie Hadfield

All Current Publications

This fact sheet is designed to assist rabbit producers in understanding breed selection for a profitable enterprise. It can also serve as a training tool for new producers, aiding them in breed selection and breeding practices.

How Invasive Species Affect Ecosystems, Marion Murray, Meg Kast

All Current Publications

Invasive species can have profound impacts on ecosystems worldwide. In the absence of their natural enemies, invasive species thrive and reproduce quickly. They can have significant ecological and economic effects. This fact sheet outlines the impact of invasive species on biodiversity, nutrient cycles, water quality, and the resulting economic consequences. It also suggests practical tips for responding.

Bite By Bite: How Ungulate Browsing Shapes North America's Forest Future, Darius Hardalau, Vladut Stefanescu, Mindaugas Bakševičius, Michael Manton, Charles Ruffner, Gediminas Brazaitis, Georgeta Ionescu, Ovidiu Ionescu

Aspen Bibliography

Ungulate browsing represents a contemporary issue for forest development, influencing forest regeneration, composition, and management practices across the world, especially in North America. This review synthesizes findings from 101 studies conducted between 1980 and 2025 to examine patterns of herbivory damage through browsing by moose, elk, white-tailed deer, black-tailed deer, and bison. Despite regional variation, high ungulate density consistently emerges as the primary factor driving browsing intensity and ecological and economic impact, leading to decreased social acceptance of coexistence with ungulates. This review highlights the selective suppression of palatable species such as balsam fir, red oak, and white cedar, leading …

Combining Submicron Spectroscopy Techniques (Afm-Ir And O-Ptir) To Detect And Quantify Nanoplastics In Snow From A Utah Ski Resort, Sara L. Belontz, Janice Brahney, Caroline E. Caplan, Eoghan Dillon, Ting Yan, Gerardo Dominguez

Watershed Sciences Faculty Publications

Atomic force microscopy-based infrared spectroscopy (AFM-IR) and optical photothermal infrared (O-PTIR) spectroscopy are cutting-edge techniques used for precise nanoscale chemical analysis, capable of detecting and characterizing particles smaller than 1 μm. In this study, we applied both techniques to analyze snow subsamples collected from Beaver Mountain, Utah. Quantification by AFM-IR identified a concentration of 1.50 × 10^–1 μg/mL of poly(3-hydroxybutyrate-co-4-hydroxybutyrate), a copolyester known for its biodegradability and biocompatibility and that was the only polymer detected. Notably, 96% of particles had thicknesses below 1 μm, with the smallest particle recorded at 14 nm in height, demonstrating the advantage …