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Develop A 3d Neurological Disease Model Of Human Cortical Glutamatergic Neurons Using Micropillar-Based Scaffolds, Cheng Chen, Xin Dong, Kai-Heng Fang, Fang Yuan, Yao Hu, Min Xu, Yu Huang, Xixiang Zhang, Danjun Fang, Yan Liu

Biological Engineering Faculty Publications

Establishing an effective three-dimensional (3D) in vitro culture system to better model human neurological diseases is desirable, since the human brain is a 3D structure. Here, we demonstrated the development of a polydimethylsiloxane (PDMS) pillar-based 3D scaffold that mimicked the 3D microenvironment of the brain. We utilized this scaffold for the growth of human cortical glutamatergic neurons that were differentiated from human pluripotent stem cells. In comparison with the 2D culture, we demonstrated that the developed 3D culture promoted the maturation of human cortical glutamatergic neurons by showing significantly more MAP2 and less Ki67 expression. Based on this 3D culture …

Congratulation A-Pin Recipients | College Of Engineering, Utah State University

College of Engineering News

College of Engineering Dean Dr. Jagath Kaluarachchi and department heads from across the college recognized 78 students on Wednesday for receiving the prestigious A-pin award for the Spring and Fall of 2018.

Ground, Proximal, And Satellite Remote Sensing Of Soil Moisture, Ebrahim Babaeian, Morteza Sadeghi, Scott B. Jones, Carsten Montzka, Harry Vereecken, Markus Tuller

Plants, Soils, and Climate Faculty Publications

Soil moisture (SM) is a key hydrologic state variable that is of significant importance for numerous Earth and environmental science applications that directly impact the global environment and human society. Potential applications include, but are not limited to, forecasting of weather and climate variability; prediction and monitoring of drought conditions; management and allocation of water resources; agricultural plant production and alleviation of famine; prevention of natural disasters such as wild fires, landslides, floods, and dust storms; or monitoring of ecosystem response to climate change. Because of the importance and wide‐ranging applicability of highly variable spatial and temporal SM information that …

Identification Of New Glutamate Decarboxylases From Streptomyces For Efficient Production Of Γ-Aminobutyric Acid In Engineered Escherichia Coli, Haina Yuan, Hongbo Wang, Ozkan Fidan, Yong Qin, Gongnian Xiao, Jixun Zhan

Biological Engineering Faculty Publications

Background

Gamma (γ)-Aminobutyric acid (GABA) as a bioactive compound is used extensively in functional foods, pharmaceuticals and agro-industry. It can be biosynthesized via decarboxylation of monosodium glutamate (MSG) or L-glutamic acid (L-Glu) by glutamate decarboxylase (GAD; EC4.1.1.15). GADs have been identified from a variety of microbial sources, such as Escherichia coli and lactic acid bacteria. However, no GADs from Streptomyces have been characterized. The present study is aimed to identify new GADs from Streptomyces strains and establish an efficient bioproduction platform for GABA in E. coli using these enzymes.

Results

By sequencing and analyzing the genomes of three Streptomycesstrains, …

Consequences Of Intraspecific Variation In Seed Dispersal For Plant Demography, Communities, Evolution And Global Change, Rebecca S. Snell, Noelle G. Beckman, Evan Fricke, Bette A. Loiselle, Carolina S. Carvalho, Landon R. Jones, Nathanael I. Lichti, Nicky Lustenhouwer, Sebastian J. Schreiber, Christopher Strickland, Lauren L. Sullivan, Brittany R. Cavazos, Itamar Giladi, Alan Hastings, Kimberly M. Holbrook, Eelke Jongejans, Oleg Kogan, Flavia Montaño-Centellas, Javiera Rudolph, Haldre S. Rogers, Rafal Zwolak, Eugene W. Schupp

Biology Faculty Publications

As the single opportunity for plants to move, seed dispersal has an important impact on plant fitness, species distributions and patterns of biodiversity. However, models that predict dynamics such as risk of extinction, range shifts and biodiversity loss tend to rely on the mean value of parameters and rarely incorporate realistic dispersal mechanisms. By focusing on the mean population value, variation among individuals or variability caused by complex spatial and temporal dynamics is ignored. This calls for increased efforts to understand individual variation in dispersal and integrate it more explicitly into population and community models involving dispersal. However, the sources, …

Career: An Integrated Approach To Understanding Selection And Evolution In Heterogeneous Environments, Zachariah Gompert

Funded Research Records

No abstract provided.

Genbank 16s Rdna Sequences For Ca. Annandia Pinicola, Ca. Gillettellia Cooleyia, Ca. Hartigia Pinicola, Ca. Profftia Spp., Ca. Pseudomonas Adelgestsugas From Taiwan, And Ca. Vallotia Spp., Carol Von Dohlen, Usha Spaulding, Kistie B. Patch, Kathryn Weglarz, Robert G. Foottit, Nathan P. Havill, Gaelen R. Burke

Browse all Datasets

The attached .csv file contains accession number, definition, and GenBank URL for 28 rDNA sequences: MF077637–MF077640 and MF098761 (‘Ca. Annandia pinicola’), MF077633–MF077636 (‘Ca. Gillettellia cooleyia’), MF077641–MF077645 (‘Ca. Hartigia pinicola’), MF108835-MF108838 (‘Ca. Profftia spp.’), MF098762 (‘Ca. Pseudomonas adelgestsugas from Taiwan), MF063340- MF063348 (‘Ca. Vallotia spp.’).

Is Grassfed Meat And Dairy Better For Human And Environmental Health?, Frederick D. Provenza, Scott L. Kronberg, Pablo Gregorini

Wildland Resources Faculty Publications

The health of livestock, humans, and environments is tied to plant diversity—and associated phytochemical richness—across landscapes. Health is enhanced when livestock forage on phytochemically rich landscapes, is reduced when livestock forage on simple mixture or monoculture pastures or consume high-grain rations in feedlots, and is greatly reduced for people who eat highly processed diets. Circumstantial evidence supports the hypothesis that phytochemical richness of herbivore diets enhances biochemical richness of meat and dairy, which is linked with human and environmental health. Among many roles they play in health, phytochemicals in herbivore diets protect meat and dairy from protein oxidation and lipid …

Invasive Coqui Frogs Are Associated With Differences In Mongoose And Rat Abundances And Diets In Hawaii, Shane A. Hill, Karen H. Beard, Shane R. Siers, Aaron B. Shiels

Ecology Center Publications

With the increasing rate of species being introduced to areas outside of their native ranges, non-natives are likely to interact in ways that influence each other’s populations. The high densities of invasive coqui frogs (Eleutherodactylus coqui) in Hawaii have been hypothesized to increase non-native mongoose (Herpestes auropunctatus) and rat (Rattus spp.) abundances, and in turn increase bird nest depredation rates. We compared the relative abundances of rats and mongooses and artificial bird nest predation rates at 12 sites that had plots with similar habitat invaded and not invaded by coqui frogs across the island of …

Comparison Of Nest Defense Behaviors Of Goshawks (Accipiter Gentilis) From Finland And Montana, Marilyn Wright, Risto Tornberg, Dustin H. Ranglack, Nate Bickford

Biology Student Research

As human impacts on wildlife have become a topic of increasing interest, studies have focused on issues such as overexploitation and habitat loss. However, little research has examined potential anthropogenic impacts on animal behavior. Understanding the degree to which human interaction may alter natural animal behavior has become increasingly important in developing effective conservation strategies. We examined two populations of northern goshawks (Accipiter gentilis) in Montana and Finland. Goshawks in Finland were not protected until the late 1980s, and prior to this protection were routinely shot, as it was believed that shooting goshawks would keep grouse populations high. In the …

Faculty Senate Executive Committee Agenda, March 18, 2019, Utah State University

Faculty Senate & Faculty Senate Executive Committee

• EPC Monthly Report - March 7, 2019
• 2019-2020 Faculty Senate Calendar
• Budget and Faculty Welfare Annual Report
• Research and Graduate Studies Annual Report
• 405.11.2 Term Appointment Promotions (second reading)
• Library Discussion (subscription costs)
• Call for Nominations - Faculty Senate President Elect

Faculty Senate Executive Committee Minutes, March 18, 2019, Utah State University

Faculty Senate & Faculty Senate Executive Committee

• 2019-2020 Faculty Senate Calendar
• Budget Faculty Welfare Annual Report
• Research and Graduate Studies Annual Report
• Library Discussion (Subscription Costs) - Jeanne Davidson
• Spring Break 2020 Calendar Update
• Parking Committee Annual Report
• Koch Task Force Resolution

Chronosequence And Direct Observation Approaches Reveal Complementary Community Dynamics In A Novel Ecosystem, Andrew Kulmatiski, Karen H. Beard

Ecology Center Publications

Non-native, early-successional plants have been observed to maintain dominance for decades, particularly in semi-arid systems. Here, two approaches were used to detect potentially slow successional patterns in an invaded semi-arid system: chronosequence and direct observation. Plant communities in 25 shrub-steppe sites that represented a 50-year chronosequence of agricultural abandonment were monitored for 13 years. Each site contained a field abandoned from agriculture (ex-arable) and an adjacent never-tilled field. Ex-arable fields were dominated by short-lived, non-native plants. These ‘weedy’ communities had lower species richness, diversity and ground cover, and greater annual and forb cover than communities in never-tilled fields. Never-tilled fields …

Restoration For Multiple Use, Mark W. Paschke, Lora B. Perkins, Kari E. Veblen

Wildland Resources Faculty Publications

Management of restored ecosystems for multiple use is a modern necessity given a growing human population and dwindling supplies of ecosystem goods and services. Multiple use management refers to managing resources simultaneously for sustainable output of many goods and services. Within any restoration, thoughtful planning and early stakeholder engagement can help harmonize seemingly competing multiple uses. Although the field of ecological restoration is young and there are few long-term lessons to draw from, we can infer from ecological theory that maximization of native biodiversity can impart resilience in the restored ecosystem and can buffer against the stress of multiple use …

Breeding Record Of The Hooded Vulture Necrosyrtes Monachus (Timminek, 1823) At Emi Abumo Woro, Kogi State, Nigeria, K. L. Adang, D. Tanko, K. L. Saliu, Umarfarooq Abdulwahab

Watershed Sciences Student Research

The hooded vulture Necrosyrtes monachus is a critically endangered species and recently published evidence suggests that its population is experiencing an extremely rapid decline, owing to indiscriminate poisoning, trade for traditional medicine, hunting, persecution, electrocution, habitat loss and degradation. As a result of these threats, the species is gradually disappearing from its range and thus, the sighting of vultures or their nests is becoming very rare. This paper thus, presents a report on the sighting of the Hooded Vulture and its nest at Emi Abumo Woro Village, Kogi State, Nigeria. This is an evident and equally an indication that Emi …

Modelling Braided River Morphodynamics Using A Particle Travel Length Framework, Alan Kasprak, James Brasington, Konrad Hafen, Richard D. Williams, Joseph Michael Wheaton

Watershed Sciences Faculty Publications

Numerical models that predict channel evolution are an essential tool for investigating processes that occur over timescales which render field observation intractable. The current generation of morphodynamic models, however, either oversimplify the relevant physical processes or, in the case of more physically complete codes based on computational fluid dynamics (CFD), have computational overheads that severely restrict the space–time scope of their application. Here we present a new, open-source, hybrid approach that seeks to reconcile these modelling philosophies. This framework combines steady-state, two-dimensional CFD hydraulics with a rule-based sediment transport algorithm to predict particle mobility and transport paths which are used …

The Antiquities Act, National Monuments, And The Regional Economy, Paul M. Jakus, Sherzod B. Akhundjanov

Applied Economics Faculty Publications

Large, landscape-scale national monuments have long been controversial. It has been claimed that large monuments harm local economies by restricting growth of the grazing, timber, mining, and energy industries. Others have asserted that large monuments aid economic growth by reducing reliance on volatile commodity markets and fostering tourism growth. In this study, we use a synthetic control approach to measure the average causal effect of nine national monument designations on county-level per capita income. We find no evidence that monument designation affected per capita income in any of 20 counties hosting nine large (>50,000 acres) national monuments established …

Surface Fire To Crown Fire: Fire History In The Taos Valley Watersheds, New Mexico, Usa, Lane B. Johnson, Ellis Q. Margolis

Aspen Bibliography

Tree-ring fire scars, tree ages, historical photographs, and historical surveys indicate that, for centuries, fire played different ecological roles across gradients of elevation, forest, and fire regimes in the Taos Valley Watersheds. Historical fire regimes collapsed across the three watersheds by 1899, leaving all sites without fire for at least 119 years. Historical photographs and quaking aspen (Populus tremuloides Michx.) ages indicate that a high-severity fire historically burned at multiple high-elevation subalpine plots in today’s Village of Taos Ski Valley, with large high-severity patches (>640 ha). Low-severity, frequent (9–29-year median interval) surface fires burned on the south aspects …

Generating Models Of Rpe Disease To Elucidate Relationships Between Intercellular Junctions And Angiogenic Factors, Elizabeth Vargis

Funded Research Records

No abstract provided.

Planning Grant: Engineering Research Center For Materials For Agriculture Resource Imaging Analytics At High Resolution (Mariah), Keith Roper

Funded Research Records

No abstract provided.

Susceptibility Of Wild-Caught Lutzomyia Longipalpis (Diptera: Psychodidae) Sand Flies To Insecticide After An Extended Period Of Exposure In Western São Paulo, Brazil, Mikel A. González, Melissa J. Bell, Scott A. Bernhardt, Reginaldo P. Brazil, Erin Dilger, Orin Courtenay, James G. C. Hamilton

Biology Faculty Publications

Background

In Brazil, members of the sand fly species complex Lutzomyia longipalpis transmit Leishmania infantum, a protist parasite that causes visceral leishmaniasis. Male Lu. longipalpis produce a sex pheromone that is attractive to both females and males. During a cluster randomised trial, to determine the combined effect of synthetic sex-aggregation pheromone and insecticide on Le. infantum transmission Lu. longipalpis had been continuously exposed to insecticide for 30 months. The objective of this study was to determine the effect of continuous exposure to the insecticides used in the trial on the susceptibility of Lu. longipalpis population.

Methods

During the trial …

Usu Researchers Model Effects Of Microgravity On Muscles During Spaceflight | College Of Engineering, Utah State University

College of Engineering News

Researchers at Utah State University are improving the ways we model muscle loss during spaceflight. Using a rotating cell culture device that simulates microgravity, a team of biological engineers tested various materials and methods to develop a protocol that mimics the physical changes seen in atrophying muscle.

Our Bodies, Ourselves? Death, Values, And The Material We Leave Behind, Rachel Robinson-Greene

Languages, Philosophy, and Communication Studies Faculty Publications

Death of those we care about is deeply distressing for many reasons, one of which is that the empty space the person once occupied is often soon filled with dangling, unanswered questions. Many of these questions will likely never be answered, but some of the most captivating might be addressed by analysis of the biological material the person left behind. What considerations ought to guide our behavior when it comes to use of a person’s remaining biological material?

Migratory Goose Arrival Time Plays A Larger Role In Influencing Forage Quality Than Advancing Springs In An Arctic Coastal Wetland, Karen H. Beard, Ryan T. Choi, A. Joshua Leffler, Lindsay G. Carlson, Katharine C. Kelsey, Joel A. Schmutz, Jeffrey M. Welker

Ecology Center Publications

With warmer springs, herbivores migrating to Arctic breeding grounds may experience phenological mismatches between their energy demands and the availability of high quality forage. Yet, how the timing of the start of the season and herbivore arrival influences forage quality is often unknown. In coastal western Alaska, approximately one million migratory geese arrive each spring to breed, where foliar %N and C:N ratios are linked to gosling survival and population growth. We conducted a three-year experiment where we manipulated the start of the growing season using warming chambers and grazing times using captive Pacific black brant (Branta bernicla nigricans) to …

Hexacoordinated Tetrel-Bonded Complexes Between Tf4 (T = Si, Ge, Sn, Pb) And Nch. Competition Between Σ- And Π-Holes, Mariusz Michalczyk, Wiktor Zierkiewicz, Rafal Wysokiński, Steve Scheiner

Chemistry and Biochemistry Faculty Publications

In order to accommodate the approach of two NCH bases, a tetrahedral TF4 molecule (T=Si,Ge,Sn,Pb) distorts into an octahedral structure in which the two bases can be situated either cis or trans to one another. The square planar geometry of TF4, associated with the trans arrangement of the bases, is higher in energy than its see-saw structure which corresponds to the cis trimer. On the other hand, the square geometry offers an unobstructed path of the bases to the π-holes above and below the tetrel atom so enjoys a higher interaction energy than is the case for the σ-holes approached …

Molecular Rotation In 3 Dimensions At An Air/Water Interface Using Femtosecond Time Resolved Sum Frequency Generation, Yi Rao, Yuqin Qian, Gang-Hua Deng, Ashlie Kinross, Nicholas J. Turro, Kenneth B. Eisenthal

Chemistry and Biochemistry Faculty Publications

This paper presents the first study of the rotations of rigid molecules in 3 dimensions at the air/water interface, using the femtosecond time resolved sum frequency generation (SFG) technique. For the purpose of this research, the aromatic dye molecule C153 was chosen as an example of a molecule having two functional groups that are SFG active, one being the hydrophilic −−C==O group and the other the hydrophobic −−CF₃ group. From polarized SFG measurements, the orientations of the two chromophores with respect to the surface normal were obtained. On combining these results with the known relative orientation of the two …

Lack Of Antinociceptive Cross-Tolerance With Co-Administration Of Morphine And Fentanyl Into The Periaqueductal Gray Of Male Sprague-Dawley Rats, Erin N. Bobeck, Shauna M. Schoo, Susan L. Ingram, Michael M. Morgan

Biology Faculty Publications

Tolerance to the antinociceptive effect of mu-opioid receptor (MOPr) agonists, such as morphine and fentanyl, greatly limits their effectiveness for long-term use to treat pain. Clinical studies have shown that combination therapy and opioid rotation can be used to enhance opioid-induced antinociception once tolerance has developed. The mechanism and brain regions involved in these processes are unknown. The purpose of this study was to evaluate the contribution of the ventrolateral periaqueductal gray (vlPAG) to antinociceptive tolerance and cross-tolerance between administration and co- administration of morphine and fentanyl. Tolerance was induced by pretreating rats with morphine or fentanyl or low-dose combination …

Evaluating Commonalities Between Different Medically Unexplained Symptoms, Dan Guo, Maria Kleinstäuber, Malcolm Henry Johnson, Frederick Sundram

Psychology Faculty Publications

This commentary presents commonalities in medically unexplained symptoms (MUS) across multiple organ systems, including symptoms, aetiological mechanisms, comorbidity with mental health disorders, symptom burden and impact on quality of life. Further, treatment outcomes and barriers in the clinician–patient relationship, and cross-cultural experiences are highlighted. This discussion is necessary in aiding an improved understanding and management of MUS due to the interconnectedness underlying MUS presentations across the spectrum of medical specialties.

Weak Spatiotemporal Response Of Prey To Predation Risk In A Freely Interacting System, Jeremy J. Cusack, Michel T. Kohl, Matthew C. Metz, Tim Coulson, Daniel R. Stahler, Douglas W. Smith, Daniel R. Macnulty

Ecology Center Publications

1. The extent to which prey space use actively minimizes predation risk continues to ignite controversy. Methodological reasons that have hindered consensus include inconsistent measurements of predation risk, biased spatiotemporal scales at which responses are measured and lack of robust null expectations.

2. We addressed all three challenges in a comprehensive analysis of the spatiotemporal responses of adult female elk (Cervus elaphus) to the risk of predation by wolves (Canis lupus) during winter in northern Yellowstone, USA.

3. We quantified spatial overlap between the winter home ranges of GPS-collared elk and three measures of predation risk: …

Survey Of Bird/Window Collisions At Utah State University-Brigham City, Spencer Smith

Research on Capitol Hill

When birds fly at full speed into the highly reflective glass windows of human structures, death is often the outcome. This research investigates the impact of architecture on bird population through a specific case study. Bird/window collisions claim from around 350 million to over 1 billion birds per year (Kahle, Flannery, & Dumbacher, 2016). Studies have shown that window surface area (Borden, Lockhart, Jones, & Lyons, 2011) can increase incidents of bird-window collisions. In 2015, Utah State University –Brigham City campus finished their new Classroom and Student Services building which features large windows and an interior tree that can be …