Digital Commons Network^™

Fall Tillage Reduced Nutrient Loads From Liquid Manure Application During The Freezing Season, Melanie N. Stock, Francisco J. Arriaga, Peter A. Vadas, Laura Ward Good, Michael D. Casler, Krishnapuram G. Karthikeyan, Zachariah P. Zopp

Plants, Soils, and Climate Faculty Publications

Reducing agricultural runoff is important year round, particularly on landscapes that receive wintertime applications of manure. No-tillage systems are typically associated with reduced runoff loads during the growing season, but surface roughness from fall tillage may aid infiltration on frozen soils by providing surface depressional storage. The timing of winter manure applications may also affect runoff, depending on snow and soil frost conditions. Therefore, the objective of this study was to evaluate runoff and nutrient loads during the freezing season from combinations of tillage and manure application timings. Six management treatments were tested in south-central Wisconsin during the winters of …

Seedling Emergence Patterns Of Six Restoration Species In Soils From Two Big Sagebrush Plant Communities, Lacey E. Wilder, Kari E. Veblen, Eugene W. Schupp, Thomas A. Monaco

Ecology Center Publications

Despite the critical need to improve degraded herbaceous understory conditions in many semiarid ecosystems, the influence of soil properties on seedling emergence of species seeded in shrubland plant communities is largely unexplored. We evaluated emergence patterns of 6 restoration species in soils from wyomingensis (i.e., Wyoming big sagebrush, Artemisia tridentata ssp. wyomingensis [Beetle & A. Young] S.L. Welsh) and vaseyana (i.e., mountain big sagebrush, A. t. ssp. vaseyana [Rydb.] Beetle) plant communities that differed in soil texture, soil organic matter content, and soil water-holding capacity. We conducted 2 separate experiments that regularly wetted soils to standardized soil water potentials (i.e., …

Do Genetic Differences Explain The Ability Of An Alkaline Shrub To Grow In Both Uplands And Wetlands?, Carol A. Rowe, Paul G. Wolf, Robert W. Lichvar

Biology Faculty Publications

The hydrophyte Allenrolfea occidentalis (S. Watson) Kuntze (iodinebush) is a halophytic shrub of the arid southwest that is listed as a facultative wetland species on the National Wetland Plant List. This rating means that the species is usually a hydrophyte but occasionally is found in uplands. We tested for genetic (ecotypic) differences between plants sampled from wetlands versus uplands. We used the technique of genotyping by sequencing to generate data from 132 plants from 30 locations representing both wetland and upland occurrences for over 1300 loci. Analyses indicated that the strongest genetic signal is from differences in geographic distribution: samples …

Persistence And Conspecific Observations Improve Problem-Solving Abilities Of Coyotes, Julie K. Young, Laura Touzot, Stacey P. Brummer

Wildland Resources Faculty Publications

Social learning has important ecological and evolutionary consequences but the role of certain factors, such as social rank, neophobia (i.e., avoidance of novel stimuli), persistence, and task-reward association, remain less understood. We examined the role of these factors in social learning by captive coyotes (Canis latrans) via three studies. Study 1 involved individual animals and eliminated object neophobia by familiarizing the subjects to the testing apparatus prior to testing. Studies 2 and 3 used mated pairs to assess social rank, and included object neophobia, but differed in that study 3 decoupled the food reward from the testing apparatus …

How Vision Governs The Collective Behaviour Of Dense Cycling Pelotons, J. Belden, Mohammad M. Mansoor, A. Hellum, S. R. Rahman, A. Meyer, C. Pease, J. Pacheco, S. Koziol, Tadd T. Truscott

Mechanical and Aerospace Engineering Faculty Publications

In densely packed groups demonstrating collective behaviour, such as bird flocks, fish schools or packs of bicycle racers (cycling pelotons), information propagates over a network, with individuals sensing and reacting to stimuli over relatively short space and time scales. What remains elusive is a robust, mechanistic understanding of how sensory system properties affect interactions, information propagation and emergent behaviour. Here, we show through direct observation how the spatio-temporal limits of the human visual sensory system govern local interactions and set the network structure in large, dense collections of cyclists. We found that cyclists align in patterns within a ± 30° …

Microwave Assisted Sol-Gel Synthesis Of Silica-Spider Silk Composites, Abul Bashar Mohammad Giasuddin, David W. Britt

Biological Engineering Faculty Publications

This study introduces a simple and environmentally friendly method to synthesize silica-protein nanocomposite materials using microwave energy to solubilize hydrophobic protein in an aqueous solution of pre-hydrolyzed organo- or fluoro-silane. Sol-gel functionality can be enhanced through biomacromolecule incorporation to tune mechanical properties, surface energy, and biocompatibility. Here, synthetic spider silk protein and organo- and fluoro-silane precursors were dissolved and mixed in weakly acidic aqueous solution using microwave technology. Scanning electron microscopy (SEM) and Atomic force microscopy (AFM) images revealed the formation of spherical nanoparticles with sizes ranging from 100 to 500 nm depending, in part, on silane fluoro- or organo-side …

Contributions Of Fire Refugia To Resilient Ponderosa Pine And Dry Mixed‐Conifer Forest Landscapes, Jonathan D. Coop, Timothy J. Delory, William M. Downing, Sandra L. Haire, Meg A. Krawchuk, Carol Miller, Marc-André Parisien, Ryan B. Walker

Biology Faculty Publications

Altered fire regimes can drive major and enduring compositional shifts or losses of forest ecosystems. In western North America, ponderosa pine and dry mixed‐conifer forest types appear increasingly vulnerable to uncharacteristically extensive, high‐severity wildfire. However, unburned or only lightly impacted forest stands that persist within burn mosaics—termed fire refugia—may serve as tree seed sources and promote landscape recovery. We sampled tree regeneration along gradients of fire refugia proximity and density at 686 sites within the perimeters of 12 large wildfires that occurred between 2000 and 2005 in the interior western United States. We used generalized linear mixed‐effects models to elucidate …

Contrasting Development Of Canopy Structure And Primary Production In Planted And Naturally Regenerated Red Pine Forests, Laura J. Hickey, Jeff Atkins, Robert T. Fahey, Mark R. Kreider, Shea B. Wales, Christopher M. Gough

Ecology Center Publications

Globally, planted forests are rapidly replacing naturally regenerated stands but the implications for canopy structure, carbon (C) storage, and the linkages between the two are unclear. We investigated the successional dynamics, interlinkages and mechanistic relationships between wood net primary production (NPP_w) and canopy structure in planted and naturally regenerated red pine (Pinus resinosa Sol. ex Aiton) stands spanning ≥ 45 years of development. We focused our canopy structural analysis on leaf area index (LAI) and a spatially integrative, terrestrial LiDAR-based complexity measure, canopy rugosity, which is positively correlated with NPP_w in several naturally regenerated forests, but …

Usu Professor To Receive Nation’S Highest Science And Engineering Award | College Of Engineering, Utah State University

College of Engineering News

The White House last week announced that Utah State University Assistant Professor Idalis Villanueva will receive the highest honor awarded by the U.S. government to scientists and engineers.

Active Layer Groundwater Flow: The Interrelated Effects Of Stratigraphy, Thaw, And Topography, Michael T. O'Connor, M. Bayani Cardenas, Bethany T. Neilson, Kindra D. Nicholaides, George W. Kling

Civil and Environmental Engineering Faculty Publications

The external drivers and internal controls of groundwater flow in the thawed “active layer” above permafrost are poorly constrained because they are dynamic and spatially variable. Understanding these controls is critical because groundwater can supply solutes such as dissolved organic matter to surface water bodies. We calculated steady‐state three‐dimensional suprapermafrost groundwater flow through the active layer using measurements of aquifer geometry, saturated thickness, and hydraulic properties collected from two major landscape types over time within a first‐order Arctic watershed. The depth position and thickness of the saturated zone is the dominant control of groundwater flow variability between sites and during …

The Ability Of A Tetrel Bond To Transition A Neutral Amino Acid Into A Zwitterion, Mingchang Hou, Qing-Zhong Li, Steve Scheiner

Chemistry and Biochemistry Faculty Publications

The interaction between glycine and F2CO/F2SiO occurs through the formation of a π-tetrel bond between the C/Si atom and a carboxyl O atom. The interaction energy is some 20 kJ/mol for the C···O tetrel bond, but exceeds 300 kJ/mol for Si···O. As part of the latter complexation process, the proton engaged in the intramolecular OH··N H-bond is transferred across to the N, forming a zwitterion. This Si···O tetrel bond is more effective at inducing this proton transfer than is placement of the glycine in an aqueous medium, complexation with an anionic BH4-, or adding an electron to the glycine.

The Interaction Of Phylogeny And Community Structure: Linking The Community Composition And Trait Evolution Of Clades, William D. Pearse, Pierre Legendre, Pedro R. Peres-Neto, T. Jonathan Davies

Ecology Center Publications

Aim

Community phylogenetic studies use information about the evolutionary relationships of species to understand the ecological processes of community assembly. A central premise of the field is that the evolution of species maps onto ecological patterns, and phylogeny reveals something more than species traits alone about the ecological mechanisms structuring communities, such as environmental filtering, competition, and facilitation. We argue, therefore, that there is a need for better understanding and modelling of the interaction of phylogeny with species traits and community composition.

Innovation

We outline a new approach that identifies clades that are ecophylogenetically clustered or overdispersed and assesses whether …

Uncovering The Natural History Of The Bromeligenous Frog Crossodactylodes Izecksohni (Leptodactylidae, Paratelmatobiinae), Rodrigo Barbosa Ferreira, Alexander T. Mônico, Cássio Z. Zocca, Marcus Thadeu T. Santos, Fernanda C.F. Lírio, João F.R. Tonini, Leandro T. Sabagh, Rafael S. Cipriano, Cecilia Waichert, Martha L. Crump, Karen H. Beard, Luís Felipe Toledo, Charles Duca

Wildland Resources Faculty Publications

Leptodactylidae consists of more than 200 described species distributed throughout the Neotropics. The five species in the genus Crossodactylodes are the only species in this family that complete their entire life cycle in rainwater accumulated between bromeliad leaves. We surveyed bromeliads for Crossodactylodes izecksohni in its type locality: the municipality of Santa Teresa, Brazil's Atlantic Forest. We found C. Izecksohni in 12 species of bromeliads. The sex ratio was approximately 1:1. Males were distinguished from females by hypertrophy of upper and forearms and the presence of nuptial pads formed by well-developed spines on the first finger. Eggs, tadpoles, juveniles, and …

Twenty-Three Unsolved Problems In Hydrology (Uph) – A Community Perspective, Günter Blöschl, Marc F.P. Bierkens, Antonio Chambel, Christophe Cudennec, Georgia Destouni, Aldo Fiori, James W. Kirchner, Jeffrey J. Mcdonnell, Hubert H.G. Savenije, Murugesu Sivapalan, Christine Stumpp, Elena Toth, Elena Volpi, Gemma Carr, David G. Tarboton, Et. Al

Civil and Environmental Engineering Faculty Publications

This paper is the outcome of a community initiative to identify major unsolved scientific problems in hydrology motivated by a need for stronger harmonisation of research efforts. The procedure involved a public consultation through online media, followed by two workshops through which a large number of potential science questions were collated, prioritised, and synthesised. In spite of the diversity of the participants (230 scientists in total), the process revealed much about community priorities and the state of our science: a preference for continuity in research questions rather than radical departures or redirections from past and current work. Questions remain focused …

Determining The Sensitivity Of Grassland Area Burned To Climate Variation In Xilingol, China, With An Autoregressive Distributed Lag Approach, Ali Hassan Shabbir, Jiquan Zhang, Xingpeng Liu, James A. Lutz, Carlos Valencia, James D. Johnston

Wildland Resources Faculty Publications

We examined the relationship between climate variables and grassland area burned in Xilingol, China, from 2001 to 2014 using an autoregressive distributed lag (ARDL) model, and describe the application of this econometric method to studies of climate influences on wildland fire. We show that there is a stationary linear combination of non-stationary climate time series (cointegration) that can be used to reliably estimate the influence of different climate signals on area burned. Our model shows a strong relationship between maximum temperature and grassland area burned. Mean monthly wind speed and monthly hours of sunlight were also strongly associated with area …

Guidelines For Aspen Restoration In Utah With Applicability To The Intermountain West, Stanley G. Kitchen, Patrick N. Behrens, Sherel K. Goodrich, Ashley Green, John Guyon, Mary O'Brien, David Tart

Aspen Bibliography

As highly productive and biologically diverse communities, healthy quaking aspen (Populus tremuloides; hereafter aspen) forests provide a wide range of ecosystem services across western North America. Western aspen decline during the last century has been attributed to several causes and their interactions, including altered fire regimes, drought, excessive use by domestic and wild ungulates, and conifer encroachment. Today’s managers need science-based guidance to develop and implement strategies and practices to restore structure, processes, and resilience to the full range of aspen functional types across multiple spatial scales. In these guidelines, we detail a process for making step-by-step decisions …

Oystershell (Mussel) Scale (Lepidosaphes Ulmi), Jay B. Karren, Alan H. Roe, Ryan Davis

All Current Publications

The oystershell scale belongs to a group of insects called the armored scales. The adult insect is enclosed in a shell made up of its own shed skins and waxy secretions. Under this covering is a sac-like animal that is quite different in appearance from most insects. It has no legs, eyes, or antennae.

Estimating Historical Forest Density From Land‐Survey Data: A Response To Baker And Williams (2018), Carrie R. Levine, Charles V. Cogbill, Brandon M. Collins, Andrew J. Larson, James A. Lutz, Malcolm P. North, Christina M. Restaino, Hugh D. Safford, Scott L. Stephens, John J. Battles

Wildland Resources Faculty Publications

In the Western United States, historical forest conditions are used to inform land management and ecosystem restoration goals (North et al. 2009, Stephens et al. 2016). This interest is based on the premise that historical forests were resilient to ecological disturbances (Keane et al. 2018). Researchers throughout the United States have used the General Land Office (GLO) surveys of the late 19th and early 20th centuries to estimate historical forest conditions (Bourdo 1956, Schulte and Mladenoff 2001, Cogbill et al. 2002, Paciorek et al. 2016). These surveys were conducted throughout the United States …

Usu Professor Receives Sudweeks Award For Contributions To Water Quality Research | College Of Engineering, Utah State University

College of Engineering News

Utah State University faculty Judy Sims received the Calvin K. Sudweeks Award on June 26 from the Utah Division of Water Quality.

Usu Alum Awarded For Work In Irrigation Engineering | College Of Engineering, Utah State University

College of Engineering News

Utah State University College of Engineering alumnus Saleh Taghvaeian will receive the Larry W. Turner Young Extension Professional Award from the American Society of Agricultural and Biological Engineers. The award will be presented July 10 at the organization’s annual conference in Boston.

Streamflow Regime Change In The Delaware River Basin, Travis Shoemaker, Madhav Bista, David Brandes

International Junior Researcher and Engineer Workshop on Hydraulic Structures

The combined impacts of hydroclimatic change and land development are widely expected to increase the frequency and magnitude of flooding in the northeast United States, with potential implications to floodplain infrastructure and mapping, hydraulic structures, land management, and flood losses. Additionally, shifting flow regimes pose a challenge for engineers and regulators of stormwater management, dams, and levees because design storms are commonly based on historical data, with the stationarity assumption that the future flow regime will mimic the past. Here, we examine selected long-term (40 to 114 years of data) streamflow records from watersheds of varying size in the upper …

Amphibians Of Santa Teresa, Brazil: The Hotspot Further Evaluated, Rodrigo Barbosa Ferreira, Alexander Tamanini Mônico, Emanuel Teixeira Da Silva, Fernanda Cristina Ferreira Lirio, Cássio Zocca, Marcio Marques Mageski, João Filipe Riva Tonini, Karen H. Beard, Charles Duca, Thiago Silva-Soares

Wildland Resources Faculty Publications

A checklist of the amphibians of Santa Teresa municipality, in southeastern Brazil is presented based on fieldwork, examination of specimens in collections, and a literature review. This new amphibian list of Santa Teresa includes 108 species, of which 106 (~98%) belong to Anura and two (~2%) to Gymnophiona. Hylidae was the most represented family with 47 species (43%). Compared to the previous amphibian lists for Santa Teresa, 14 species were added, 17 previously reported species were removed, and 13 species were re-identified based on recent taxonomic rearrangements. Of the 14 species added, 11 (79%) were first recorded during our fieldwork …

Drought And Freezing Vulnerability Of The Isolated Hybrid Aspen Populus X Smithii Relative To Its Parental Species, P. Tremuloides And P. Grandidentata, Nicholas J. Deacon, Jake J. Grossman, Jeannine Cavender-Bares

Aspen Bibliography

Aim

We assessed the vulnerability of an isolated, relictual Pleistocene hybrid aspen population of conservation interest (Populus x. smithii ) and the nearest populations of its parent species (Populus grandidentata and Populus tremuloides ) to springtime post‐bud break freezing and growing season drought stress. Response to these stressors in the three taxa was compared in terms of avoidance and tolerance.

Location

North American Midwest; USA.

Methods

Unique genets from the hybrid Niobrara River population and from the two parental populations were propagated in a common garden from rhizome cuttings. We tracked their phenology before and after bud break …

Relating Spatial Patterns Of Stream Metabolism To Distributions Of Juveniles Salmonids At The River Network Scale, Matthew J. Kaylor, Seth M. White, W. Carl Saunders, Dana R. Warren

Watershed Sciences Faculty Publications

Understanding the factors that drive spatial patterns in stream ecosystem processes and the distribution of aquatic biota is important to effective management of these systems and the conservation of biota at the network scale. In this study, we conducted field surveys throughout an extensive river network in NE Oregon that supports diminishing populations of wild salmonids. We collected data on physical habitat, nutrient concentrations, biofilm standing stocks, stream metabolism (gross primary production [GPP] and ecosystem respiration [ER]), and ESA‐listed juvenile salmonid density from approximately 50 sites across two sub‐basins. Our goals were to (1) to evaluate network patterns in these …

Comparison Between Hydrogen And Halogen Bonds In Complexes Of 6-Ox-Fulvene With Pnicogen And Chalcogen Electron Donors, Mingchang Hou, Qing-Zhong Li, Steve Scheiner

Chemistry and Biochemistry Faculty Publications

Quantum chemical calculations are applied to complexes of 6‐OX‐fulvene (X=H, Cl, Br, I) with ZH3/H2Y (Z=N, P, As, Sb; Y=O, S, Se, Te) to study the competition between the hydrogen bond and the halogen bond. The H‐bond weakens as the base atom grows in size and the associated negative electrostatic potential on the Lewis base atom diminishes. The pattern for the halogen bonds is more complicated. In most cases, the halogen bond is stronger for the heavier halogen atom, and pnicogen electron donors are more strongly bound than chalcogen. Halogen bonds to chalcogen atoms strengthen in the order O

Integrating Arthropod And Weed Management In A Water-Stressed Agro-Ecosystem, Ricardo Ramirez

Funded Research Records

No abstract provided.

Transfer Of Calibration To Cubesat On-Board Carbon Nanotube Sources, David Osterman, A. Amparan, A. Ghandour, T. Kampe, P. Kerrigan, J. Necas, R. Rohrschneider, G. Reavis, M. Veto, R. Warden

The Characterization and Radiometric Calibration for Remote Sensing Annual Meeting (CALCON)

Calibration of CubeSat and other small payloads presents a variety of challenges including greater susceptibility to the space environment, volume constraints on calibration sources and subsystems, and power constraints on electronics. CIRiS (Compact Infrared Radiometer in Space), built by Ball Aerospace, is a multispectral, thermal infrared, radiometric imaging instrument with on-board calibration system, whose small volume (< 8 cm x 20 cm x 20 cm), weight (< 2 kg) and power (< 9.5 W average, including heaters) are compatible with CubeSat spacecraft, or any application with resource constraints. CIRiS has been integrated to a 6U spacecraft bus for an upcoming mission in Low Earth Orbit (LEO). The primary mission objective is demonstration of new technologies for radiometric imaging and calibration from CubeSats or SmallSats. New technologies on CIRiS include two 1/8 inch thick, flat-panel, high emissivity (e> .9965) carbon nanotube (CNT) blackbody sources and a new model of uncooled microbolometer Focal Plane Array (FPA) with less demanding temperature stabilization requirements than previous versions.

Three calibration views are available in space: to 1) deep space 2) an on-board CNT source at …

Unravel The Cellular Biophysical Dynamics Of Spatial Constraint-Induced Membrane Blebbing And 3d Migration Using A Microfluidic Platform And Data-Driven Mathematical Modeling, Yu Huang

Funded Research Records

No abstract provided.

Consumption Of Black Raspberries Altered The Composition Of The Fecal Microbiome In Mice Fed A Western Type Diet (Or04-01-19), Abby D. Benninghoff, Sumira Phatak, Korry Hintze

Chemistry and Biochemistry Faculty Publications

Dietary strategies to reduce colonic inflammation and promote gut homeostasis may markedly reduce the risk of colitis-associated colorectal cancer. Previously, we showed that dietary supplementation with black raspberries significantly suppressed colitis and colon tumorigenesis promoted by the consumption a Western type diet in mice. In this study, our goal was to assess the impact of consumption of the TWD with and without black raspberry supplementation on the composition of the fecal microbiome over the course of disease development.

Learning Logic: Examining The Effects Of Context Ordering On Reasoning About Conditionals, Christina W. Lommatsch, Patricia S. Moyer-Packenham

Teacher Education and Leadership Faculty Publications

Logical statements are prevalent in mathematics, science and everyday life. The most common logical statements are conditionals, ‘If H … , then C … ’, where ‘H’ is a hypothesis and ‘C’ is a conclusion. Reasoning about conditionals depends on four main conditional contexts (intuitive, abstract, symbolic or counterintuitive). This study tested a theory about the effects of context ordering on reasoning about conditionals. Researchers developed and tested a virtual manipulative mathematics app, called the Learning Logic App.

A total of 154 participants, randomly assigned to a context ordering, interacted with the Learning Logic App. Researchers collected data using a …