Digital Commons Network^™

Serials Solutions Subject Search Report 2010-2011, Andree J. Rathemacher

Technical Services Reports and Statistics

Statistics on the total number of Serials Solutions subject searches at the University of Rhode Island Libraries by month for 2010-2011. Shows how many times the A-Z full text electronic journal list (at http://zu4tq4pb5v.search.serialssolutions.com/) was browsed by specific subjects.

Serials Solutions Click-Through Statistics By Provider And Database 2010-2011, Andree J. Rathemacher

Technical Services Reports and Statistics

Statistics on the total number of database and journal-level clicks, by provider and database, of Serials Solutions tools at the University of Rhode Island Libraries by month for 2010-2011. Clicks may have originated from the A-Z full text electronic journal list (at http://zu4tq4pb5v.search.serialssolutions.com/), from OpenURL links ("360 Link"), or the 856 fields of Serials Solutions-generated MARC records ("360 MARC Updates").

Ebsco Library Of Congress Classification Report 2011, Andree J. Rathemacher

Technical Services Reports and Statistics

This report lists all periodicals subscribed to in 2011 through EBSCO Subscription Services by the University Libraries, University of Rhode Island. Information provided includes title, ISSN, Library of Congress Classification number and name, and subscriber (URI, Pell, or CCE). The list is sorted by LC Classification to better show the journals that support each discipline/subject area. Not included here are titles available through online journal packages and reference databases, which now comprise the majority of the Libraries' subscriptions. The journals listed here are those to which the Libraries subscribe to individually, title-by-title.

Ebsco Historical Price Analysis Report 2011, Andree J. Rathemacher

Technical Services Reports and Statistics

This report lists all periodicals subscribed to in 2011 through EBSCO Subscription Services by the University Libraries, University of Rhode Island. This report analyzes prices over a five-year period. Information provided includes title, frequency, price in each of the last five years, and percent changes in price over five years. The list is sorted by LC Classification to better show the price changes in each discipline/subject area. The associated spreadsheet includes additional information such as ISSN, Library of Congress Classification number, country of origin, publisher name, and title format (print or online). The spreadsheet may be downloaded and sorted by …

Lgbt 101 And Safe Spaces Program 2011, Joseph A. Santiago

Lesbian Gay Bisexual Transgender Queer Center

LGBT 101 and Safe Spaces Program was what Joseph Santiago put together to train the RAs in 2011. The LGBT 101 and Safe Spaces Program was designed to be become a train the trainer program here at URI. Purpose LGBT 101 information is part of a program to create a safer and more receptive campus and work place environment for gay, lesbian, bisexual, transgender and/or questioning people through education and ally development. It is modeled after similar programs at colleges and universities throughout the United States. This short introduction to LGBT 101 and introduction to SafeSpace training will begin to …

Planktonic Microbes In The Gulf Of Maine Area, William K.W. Li, Robert A. Andersen, Dian J. Gifford, Lewis S. Incze, Jennifer L. Martin, Cynthia H. Pilskaln, Juliette N. Rooney-Varga, Michael E. Sieracki, William H. Wilson, Nicholas H. Wolff

Graduate School of Oceanography Faculty Publications

In the Gulf of Maine area (GoMA), as elsewhere in the ocean, the organisms of greatest numerical abundance are microbes. Viruses in GoMA are largely cyanophages and bacteriophages, including podoviruses which lack tails. There is also evidence of Mimivirus and Chlorovirus in the metagenome. Bacteria in GoMA comprise the dominant SAR11 phylotype cluster, and other abundant phylotypes such as SAR86-like cluster, SAR116-like cluster, Roseobacter, Rhodospirillaceae, Acidomicrobidae, Flavobacteriales, Cytophaga, and unclassified Alphaproteobacteria and Gammaproteobacteria clusters. Bacterial epibionts of the dinoflagellate Alexandrium fundyense include Rhodobacteraceae, Flavobacteriaceae, Cytophaga spp., Sulfitobacter spp., Sphingomonas spp., and unclassified Bacteroidetes. Phototrophic prokaryotes in GoMA include cyanobacteria …

Immunogenic Consensus Sequence T Helper Epitopes For A Pan-Burkholderia Biodefense Vaccine, Anne S. De Groot, Matthew Ardito, Leonard Moise, Eric A. Gustafson, Denice Spero, Gloria Tejada, William Martin

Institute for Immunology and Informatics Faculty Publications

Background: Biodefense vaccines against Category B bioterror agents Burkholderia pseudomallei (BPM) and Burkholderia mallei (BM) are needed, as they are both easily accessible to terrorists and have strong weaponization potential. Burkholderia cepaciae (BC), a related pathogen, causes chronic lung infections in cystic fibrosis patients. Since BPM, BM and BC are all intracellular bacteria, they are excellent targets for T cell-based vaccines. However, the sheer volume of available genomic data requires the aid of immunoinformatics for vaccine design. Using EpiMatrix, ClustiMer and EpiAssembler, a set of immunoinformatic vac-cine design tools, we screened the 31 available Burkholderia genomes and performed initial tests …

An Integrated Genomic And Immunoinformatic Approach To H. Pylori Vaccine Design, Matthew Ardito, Joanna Fueyo, Ryan Tassone, Frances Terry, Kristin Dasilva, Songhua Zhang, William Martin, Anne S. De Groot, Steven F. Moss, Leonard Moise

Institute for Immunology and Informatics Faculty Publications

Background: One useful application of pattern matching algorithms is identification of major histocom-patability complex (MHC) ligands and T-cell epitopes. Peptides that bind to MHC molecules and interact with T cell receptors to stimulate the immune system are critical antigens for protection against infectious pathogens. We describe a genomes-to-vaccine approach to H. pylori vaccine design that takes advantage of immunoinformatics algorithms to rapidly identify T-cell epitope sequences from large genomic datasets.

Results: To design a globally relevant vaccine, we used computational methods to identify a core genome comprised of 676 open reading frames (ORFs) from amongst seven genetically and phenotypically …

Healthcare Issues In The United States And Beyond With Existentialist Philosophy, Kristen D'Entremont

Senior Honors Projects

Healthcare Issues in the United States and Beyond with Existentialist Philosophy

Kristen D’Entremont
Faculty Sponsor: Gail Faris, Women’s Center

The importance of quality healthcare is a personal matter for each and every individual across the globe. We cannot go a day without considering the impact that proper health through good nutrition, disease prevention, and access to care has on our bodies. The topic of medical care has interested me for many years and has lead me to the major and position that I am in today. As a senior, majoring in Biology with a pre-medical focus, I will begin the …

A Comparison Of Two Methods For T Cell Epitope Mapping: “Cell Free” In Vitro Versus Immunoinformatics, Timothy J. Messitt, Frances Terry, Leonard Moise, William Martin, Anne S. De Groot

Institute for Immunology and Informatics Faculty Publications

Background: Methods for identifying physiologically relevant T-cell epitopes are critically important for development of vaccines and the design of therapeutic proteins. As the number of proteins that are being evaluated for putative immunogenicity expands, rapid and accurate tools are in great demand. Several methods to identify T-cell epitopes have been developed, the most recent of which is a cell free system consisting of a minimal set of proteases incubated with HLA DRB1*0101, HLA-DM and whole antigen. Isolation and sequencing of the HLA bound peptides using mass spectrometry allows for the prospective identification of immuno-dominant T-cell epitopes.

Results: We present here, …

The Effects Of Climate Change On Public Health And The Healthcare Provider's Role In Addressing Climate Change, Allyson J. Pfeiffer

Senior Honors Projects

“Climate change is a term that refers to major changes in temperature, rainfall, snow, or wind patterns lasting for decades or longer.  Both human-made and natural factors contribute to climate change” (EPA, p. 1, 2011).  Some examples of human-made causes of global warming include burning fossil fuels (e.g., petroleum, coal, diesel), cutting down forests, and developing land for farms, cities, and roads, because these activities all release green house gases into the atmosphere.  Green house gases are gases that trap heat in the atmosphere.  There are some greenhouse gases such as carbon dioxide that occur naturally and are emitted into …

Seasonality On The Oregon Coast: Avian Faunal Remains From Whale Cove (35-Lnc-60), Jessica Watson

Senior Honors Projects

The northwest coast of the United States was one of the first regions to receive Homo sapiens immigrants in the Western hemisphere and is rich in archaeological sites.  The Whale Cove site, first excavated in 1985, was initially analyzed by Ann C. Bennett-Rogers and R. Lee Lyman.  Their findings included an introductory analysis of lithic, bone, antler, and shell artifacts and general inventory of all pieces examined.  Bennett-Rogers found preliminary evidence for changes in vegetation and shellfish taxa at the Whale Cove site over time and has hypothesized that these changes were due to a tsunami event. Robert J. Losey …

Care Of The Self And The Will To Freedom: Michel Foucault, Critique And Ethics, Stephanie M. Batters

Senior Honors Projects

Care of the Self and the Will to Freedom

Stephanie Batters

Faculty Sponsor:  Stephen Barber, English

What do subjectivity, power and ethics have in common?  For French philosopher Michel Foucault, each of these concepts inherently resides within the others.  His works, spanning from the mid-1950s to his death in 1984, offer a profound theoretical approach to the complex questions that obtain between the individual and society.  Foucault’s works present careful and intricate theories about the relationships of the past with the present, the individual with society, and power with truth.  Many of his writings explore how the individual is made …

Carbon And Nitrogen Stable Isotopes In Fruits And Arthropods That Are Eaten By Songbirds During Migration, Sarah E. Donlan

Senior Honors Projects

The use of stable isotope analysis is becoming more common in all areas of animal ecology. In particular, natural variation in the abundance of stable isotopes makes them useful in studies of foraging ecology. For example, nitrogen stable isotopes can offer insight into trophic relationships and carbon stable isotopes tend to trace the original source of carbon in a system (e.g. - photosynthetic pathway).  This natural variation is potentially useful for quantifying resource use because the isotopic composition of an animal’s diet is assimilated somewhat predictably into the animal’s tissues. In fact, the ratio of naturally-occurring isotopes in animal tissues …

The Implications Of Merleau-Ponty For The Human Sciences, Ryan Marcotte

Senior Honors Projects

The Implications of Merleau-Ponty for the Human Sciences Ryan Marcotte Cobb Faculty Sponsor: Galen Johnson, Philosophy The American Anthropology Association (AAA) made headlines in November 2010 due to a controversial change in their 'Long-Range Plan.' The revised AAA mission statement omits all mention of the word 'science' and this omission has sparked a fierce debate within the anthropology community. The debate reveals that the study of social phenomena can be approached from two competing points of view – a scientific and a non-scientific perspective.  This project is concerned with the historical and intellectual developments that led to this competition between …

Investigation Of Improvements In The Quality Of Life For Cancer Patients, Joelle M. Gagnon

Senior Honors Projects

Investigation of Improvements in the Quality of Life for Cancer Patients

Joelle Gagnon

Faculty Sponsor: Lenore Martin, CELS

The treatment of cancer has been a topic of study for decades due to the devastating effects of the disease and the need for a therapeutic regimen that presents maximum efficacy with minimal toxicity. For cancer patients, quality of life is disturbed by not only the pathogenesis of disease, but also the potential toxic effects on the body as a result of the prescribed therapeutic regimen. Topoisomerase inhibition is a molecular mechanism of action of chemotherapy agents that have been of clinical …

The Importance Of Course Offerings On The Topic Of Environmental Sustainability At The University Of Rhode Island, Sarah Kane

Senior Honors Projects

For my project, I created a survey for University of Rhode Island students’ exploring their experiences and interest in course offerings on sustainability.  I am distributing it to students through different mediums such as email, Facebook and in person. Through my analysis of the results, I am seeking some evidence about whether or not students at this institute feel that our school offers enough courses on this topic and whether or not students are interested in taking courses on this topic.

As a business major, I have taken several courses where we learned about surveying and analysis of the results. …

Love: A Biological, Psychological And Philosophical Study, Heather M. Chapman

Senior Honors Projects

The concept of love has been an eternally elusive subject. It is a definition and meaning that philosophers, psychologists, and biologists have been seeking since the beginning of time. Wars have been waged and fought over it, while friendships have been initiated and have ended because of this idea. But what exactly is love, and why is it important to define this enigma?

In order to help define this idea of love, several books and numerous research articles were consulted, and interviews were conducted with faculty of The University of Rhode Island. Dr. Nasser Zawia was interviewed, in order to …

Alternate Models For Forecasting Hedge Fund Returns, Michael A. Holden

Senior Honors Projects

Alternate Models for Forecasting Hedge Fund Returns

Michael Holden

Faculty Sponsor: Gordon Dash, Finance and Decision Sciences

Investors have always wanted to improve the efficiency of modeling realized volatility to maximize directional trading returns and substantially improve profitability. As proposed, this honors project will provide evidence from hedge fund returns that a Radial-Basis Function (RBF) artificial neural network (ANN), specifically the Kajiji-4 RBF-ANN dominates other forecast methods in producing one-period ahead change-of-direction when forecasting the expected returns of various hedge fund indexes.

I began this project by collecting historical economic data in monthly increments to serve as the dependent variables. …

Bond Volatility Transmissions Between United States And European Markets, Seth Kulman

Senior Honors Projects

Bond Volatility Transmissions Between United States and European Markets

Seth Kulman

Faculty Sponsor: Gordon Dash, Finance and Decision Sciences

Recent events have illustrated the degree of connection between the world’s economies.  Economic events occurring in one country are felt in countless others, most vividly demonstrated by the onset of a worldwide recession following the financial collapse in the United States.  Volatility no longer stays contained within one local economy.

The purpose of this study is to examine volatility spillovers between the United States and European bond markets.  To identify volatility effects in a given country, we will be using a …

The Importance Of Undecideds In The Evolution Vs. Creationism Debate, Seth Steinman

Senior Honors Projects

As a scientific theory, evolution has as much empirical support for its core assertions as the heliocentric universe theory or the belief that the Earth is round.  Despite a unanimous consensus in the scientific community about evolution’s validity, the General Social Survey (GSS) consistently reports that 85 percent of Americans are either undecided or do not believe in evolution.

This divide between evolutionists, led by scientists, and creationists, led by religious leaders, has enormous scientific and political implications, which include funding for basic scientific research, acting to stop global warming, and what schools should be teaching our children.

The most …

The Fabrication Of Gender: Concept To Catwalk, Emily J. Pascoe

Senior Honors Projects

Gender, as I have come to understand it, is a vast, variable and personal response to one’s society and culture. As an interpretation of one’s biological sex it is a prominent aspect in our lives. Because of this prominence, attributes of gender are revealed in many forms. In relevance to fashion gender is manifested visually. Traits of femininity, androgyny and masculinity are rendered in dress and appearance.

I have portrayed these traits by using editorial fashion images to create a visual gender continuum. Using images from a compilation of current fashion magazines, whose target consumers are either men or women, …

Monitoring And Prevalence Rates Of Metabolic Syndrome In Military Veterans With Serious Mental Illness, Sameed Ahmed M. Khatana, Kane, Tracey H. Taveira, Mark S. Bauer, Wen-Chih Wu

Pharmacy Practice and Clinical Research Faculty Publications

Background:

Cardiovascular disease is the leading cause of mortality among patients with serious mental illness (SMI) and the prevalence of metabolic syndrome—a constellation of cardiovascular risk factors—is significantly higher in these patients than in the general population. Metabolic monitoring among patients using second generation antipsychotics (SGAs)—a risk factor for metabolic syndrome—has been shown to be inadequate despite the release of several guidelines. However, patients with SMI have several factors independent of medication use that predispose them to a higher prevalence of metabolic syndrome. Our study therefore examines monitoring and prevalence of metabolic syndrome in patients with SMI, including those …

Partnership For International Research And Education In Microfluidic Technology With Applications In Point Of Care Diagnostic, Mohammed Faghri, Sigrid Berka, John Grandin, Thomas Mather, D.M.L Meyer, Zongqin Zhang, Otto Gregory, Stephan Grilli, Christopher Baxter, Constantine Anagnostopoulos, Assem Abolmaaty

Discovery@URI

This poster summarizes the research highlights of a project conducted as part of an National Science Foundation (NSF) partnership for research and education. The objective of this multidisciplinary, international project was to conduct research on microfluidic technology and applications. The project team is comprised of participants from the University of Rhode Island and the Technical University of Braunschweig in Germany. The research focuses on the following four tasks: Task 1 – Discovery of disease biomarkers; Task 2 –Streaming based microfluidic platform for pumping, mixing, separation and detection; Task 3 – Development of rapid, quantitative and sensitive microfluidic fluorescence immunosensors for …

Development Of High Resolution Sea Floor Mapping Tools And Techniques, Gabrielle Inglis, J. Ian Vaughn, Clara Smart, Christopher N. Roman

Graduate School of Oceanography Faculty Publications

There is a persistent need for high resolution photographic and bathymetric maps of the sea floor for many research areas in marine geology, biology and archaeology. This poster will present recent work using high frequency multibeam sonars, stereo vision and structured light laser imaging techniques to create maps with centimeter resolution for these applications. This research involves the development of new image and sonar processing techniques that combat the typical difficulties of imperfect navigation information, limited sensor ranges and adverse environmental conditions associated with using marine robotic vehicles in the ocean. Data for this work has been collected with the …

Library Impact Statement For Bps 455 Protein Molecular Modeling, Michael Vocino

Library Impact Statements

Library Impact Statement for BPS 455 Protein Molecular Modeling. No new resources were required to support this course.

Library Impact Statement For Bps 555 Protein Molecular Modeling, Michael Vocino

Library Impact Statements

Library Impact Statement for BPS 555 Protein Molecular Modeling. No new resources were required to support this course.

Development Of High-Resolution Underwater Mapping Techniques, Christopher N. Roman, Gabrielle Inglis, J. Ian Vaughn, Stefan Williams, Oscar Pizarro, Ariell Friedman, Daniel Steinberg

Graduate School of Oceanography Faculty Publications

No abstract provided.

Exploration Of The Kolumbo Volcanic Rift Zone, Steven Carey, Katherine L. Croff Bell, Paraskevi Nomikou, Georges Vougioukalakis, Christopher N. Roman, Kathleen Cantner, Konstantina Bejelou, Maria Bourbouli, Julie Fero Martin

Graduate School of Oceanography Faculty Publications

No abstract provided.

Emcc: Multicultural Center Ejournal (Winter 2011), Angelina Arias, Stefan Correira, Denise Dujon, Amita Joshi, Joseph Santiago, Holly Tran, Kim Washor

Multicultural Student Services Center

The eMCC is a bi-annual electronic publication from the University of Rhode Island’s Multicultural Center. It features original creative works from undergraduate/graduate students, staff/faculty members, and guest contributors. eMCC is a growing branch off of an idea that a wealth of diversity exists in our daily lives. Often, we continue on our ways without noticing the smallest details or the most simple gestures. eMCC strives to give light to the beauty we sometimes forget to see. In our first ground-breaking issue, we celebrate the legacy of Dr. Martin Luther King, Jr. in a theme that questions, “How has community service …