Digital Commons Network^™

The Feasibility Of Utilizing The Open Dynamic Interaction Network (Odin) App To Assess Rema Data Across 30 Days Among Those Recovering From Alcoholism, Dennis E. Mcchargue, Bilal Khan, Jesscia Phelps, Patrick Duryea, Kimberly A. Tyler, Arthur Andrews, Ellie Reznicek, Lucy Napper, Mohamed Saad, Hsuan-Wee Lee

Department of Psychology: Faculty Publications

About ~4 million people with an alcohol use disorder receive treatment annually, and frequent relapse has produced a rapid revolving door between recovery and use. This paper presents preliminary data from a prospective micro-longitudinal study (30 days) that examines co-evolution of relapse risk processes of people with alcohol use disorders who entered a short-term residential substance use treatment. The primary goal of the current data was to assess the feasibility of using the open dynamic interaction network (ODIN) responsive ecological momentary assessment (rEMA). rEMA collected daily estimates on affect, urges, sober-support engagement, and use. The ODIN app administered twelve questions …

Immunological Feedback Loops Generate Parasite Persistence Thresholds That Explain Variation In Infection Duration, Clayton E. Cressler, Daniel C.G. Metz, David A. Chang Van Oordt, Andrea L. Graham

School of Biological Sciences: Faculty Publications

Infection duration affects individual host fitness and between-host transmission. Whether an infection is cleared or becomes chronic depends on the complex interaction between host immune responses and parasite growth. Empirical and theoretical studies have suggested that there are critical thresholds of parasite dose that can determine clearance versus chronicity, driven by the ability of the parasite to manipulate host immunity. However, the mammalian immune response is characterized by strong positive and negative feedback loops that could generate duration thresholds even in the absence of direct immunomodulation. Here, we derive and analyse a simple model for the interaction between T-cell subpopulations …

Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Applications For Metabolomics, Darcy Cochran, Robert Powers

Robert Powers Publications

Metabolomics is an interdisciplinary field that aims to study all metabolites < 1500 Da that are ubiquitously found within all organisms. Metabolomics is experiencing exponential growth and commonly relies on high-resolution mass spectrometry (HRMS). Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) is a form of HRMS that is particularly well suited for metabolomics research due to its exceptionally high resolution (10⁵–10⁶) and sensitivity with a mass accuracy in parts per billion (ppb). In this regard, FT-ICR-MS can provide valuable insights into the metabolomics analysis of complex biological systems due to unique capabilities such as the easy separation of isobaric and isomeric species, isotopic fine structure analysis, spatial resolution of metabolites in cells and tissues, and a high confidence (error) in metabolite identification. Alternatively, the large and complex data sets, long acquisition times, high cost, and limited access mainly through national mass spectrometry facilities may impede the …

A New Species Of Acmaeodera Eschscholtz, 1829 (Coleoptera: Buprestidae) From The State Of Michoacán, Mexico, Jason A. Hansen, Richard L. Westcott

Insecta Mundi

Acmaeodera parasuperba Hansen and Westcott, new species (Coleoptera: Buprestidae), from Michoacán, is described, imaged, and its relationship discussed.

Homocopris Burmeister, 1846 (Coleoptera: Scarabaeidae): Lectotype Designation For Copris Torulosus Eschscholtz, 1822, And Correction On The Geographic Distribution Of The Two Chilean Species, José Mondaca, Fernando Z. Vaz-De-Mello

Insecta Mundi

Homocopris Burmeister, 1846 (Coleoptera: Scarabaeidae) is a small genus of South American dung beetles composed of four species distributed in Argentina, Brazil, and Chile. Recently, a neotype was designated for Copris torulosus Eschscholtz, 1822 (currently H. torulosus) based on the assumption that the original type series had been lost. However, this designation is invalid for failing to comply with articles 75.2, 75.3, 75.3.1, and 75.3.4. of the International Code of Zoological Nomenclature. Furthermore, even if it had been nomenclaturally valid, the neotype now loses its type status because we found a syntype in the material of the Johann …

New Species, New Combinations, Synonymies, And Nomenclatural Discussion For Hispaniolan Longhorned Beetles (Coleoptera: Disteniidae, Cerambycidae), Steven W. Lingafelter, Norman E. Woodley

Insecta Mundi

Fifteen new species of longhorned beetles (Coleoptera: Cerambycidae, Disteniidae) from Hispaniola (the Dominican Republic and Haiti) are diagnosed, described, and illustrated: Novantinoe pilithorax Lingafelter, new species (Disteniini); Eburiola ciferrii Lingafelter, new species (Eburiini), Eburiola konstantinovi Lingafelter, new species (Eburiini), Elaphidion jaragua Lingafelter, new species (Elaphidiini), Linsleyonides guerreroi Lingafelter, new species (Elaphidiini), Compsibidion iviei Lingafelter, new species (Tropidini: Subtribe Neoibidionina), Hormathus albisetosus Lingafelter, new species (Tropidini: Subtribe Compsina), Trichrous eryphoides Lingafelter, new species (Dichophyiini), Plectrocerum woodruffi Lingafelter, new species (Dichophyiini), Oreodera nearnsi Lingafelter, new species (Acrocinini/Acanthoderini), Acrepidopterum fuscum Lingafelter, new species (Apomecynini), Acrepidopterum giesberti Lingafelter, new species (Apomecynini), Estola touroulti Lingafelter, …

Additions To The Knowledge Of The Vietnamese Tiger Beetle Species (Coleoptera: Cicindelidae), Jürgen Wiesner, Christian Kerkering, Miroslav Klícha

Insecta Mundi

Therates tuberosus Fleutiaux, 1893 and Calochroa octogramma octogramma (Chaudoir, 1852) (Coleoptera: Cicindelidae) are newly recorded for Vietnam. Ten additional species are reported to have new provincial records in Vietnam.

Range Extension For Pulchriphyllium Anangu Cumming Et Al., 2023 (Phasmatodea: Phylliidae) And First Record From Maharashtra, Gaurang Tawde, Amol Patwardhan, Royce Cumming

Insecta Mundi

Pulchriphyllium anangu Cumming et al., 2023 is here reported for the first time from Maharashtra state, India. Also, this is the first record of a leaf insect (Phasmatodea: Phylliidae) for Phansad Wildlife Sanctuary, District Raigad, Maharashtra. This sighting represents the northernmost distribution in the Western Ghats for Pulchriphyllium anangu.

Studies Of Exotic Electronic, Optical, And Electrochemical Properties In Nanoparticle Assembly And Graphene, Jay Min Lim

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

It is well known that exotic properties and phenomena emerge as structural dimensions shrink to nanoscales. We self-assembled one-dimensional chains of gold nanoparticles in solution and quantified the growth process by monitoring the redshift of localized surface plasmon resonance (LSPR). Curiously, the redshift stopped while the chains continued to rearrange as manifested by gradual reduction in the LSPR peak. Using electromagnetic simulations, we quantitatively explained the phenomena as a rapid “addition-polymerization” followed by a sharp transition to “condensation-process.” Next, recognizing the significant electric field enhancement in the interparticle gap, a photoluminescent-active Eu³⁺ ion was used to probe Surface-Enhanced Photoluminescence …

Assessing Even Flat-Fan Nozzles For Spot Spray Herbicide Applications, Thiago H. Vitti

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Herbicide efficiency in row-crop agriculture can be improved using precision technologies for controlling weeds and minimize agronomic, economic, and environmental impacts. Site-specific weed management technologies, such as spot-sprayers, allow herbicides to be sprayed only where weeds are present in the field. Understanding application parameters and their influence on weed control for site-specific spot-spray applications is essential. This research involved laboratory and greenhouse studies to investigate the coverage and coefficient of variation (CV) of even flat-fan spray nozzles under different spot-spray application scenarios, as well as the effect of weed size and application method on the control of various weed species …

Exploring Intraplate Seismicity In The Midwest, Alexa Fernández

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

Intraplate seismicity represents a notable occurrence within the stable North American Craton. This research explores the potential sources of stresses that could reactivate older faults and influence seismic activity within this region. Among these sources, the enduring impact of the last glacial period is considered, which includes continued glacial isostatic adjustments (GIA). During GIA the lithosphere rebounds due to the retreating ice, and the forebulge caused by far-field flexure in response to the glacial load, collapses. This results in significant faulting, fracturing, and seismic activity associated with the deglaciation phase. The adjustment of the lithosphere manifests as both near surface …

Transforming Grassland Conservation: Challenges And Opportunities Across Law, Policy, And Human Dimensions, Conor D. Barnes

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Great Plains social-ecological systems are facing growing pressure from complex, ‘wicked’ problems. Addressing these problems will require integrating ecological resilience and complex systems thinking concepts into our legal framework in order to better reflect the changing ecological reality of the Great Plains and promote flexibility and adaptability in the face of that change. In this dissertation, I examine how past and present policy priorities have affected social-ecological systems on the Great Plains, and how ecological resilience and complex systems thinking might be applied to grassland management policy. In Chapter 2, I examine the rapid progress made in the adoption of …

"I Will Write Mad Stories": The Hysterical "I" In The Diaries Of George Eliot, Charlotte Forten Grimke, Virginia Woolf, And Sylvia Plath, Jaclyn Marie Swiderski

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation focuses on the long history of hysteria and the ways in which it has been used to denigrate and silence disabled women. Women diagnosed as hysterical, by either the medical establishment or the court of public opinion, are denied the right to generate knowledge about and for themselves – they are epistemologically disabled. The author argues that hysterical women have unique ways of looking at and understanding the world which push back against their epistemological disablement. In order to uncover some of this history of hysterical women, this dissertation uses the diaries of four “hysterical” women over the …

Role Of The Malate Dehydrogenase-Citrate Synthase Metabolon In Metabolic Flux Regulation, Joy John Omini

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The TCA cycle enzymes- malate dehydrogenase (MDH) and citrate synthase (CS)- interact to transfer oxaloacetate from the active site of MDH to the active site of CS, through an electropositive channel. The MDH-CS metabolon is highly conserved across different domains of life, and it has been associated with many advantages. Some of these advantages include protecting oxaloacetate from competing enzymes like aspartate aminotransferase, allowing the thermodynamically unfavorable MDH forward reaction to occur and increasing the local concentration of oxaloacetate within the active site of CS. These advantages and conservativeness of the MDH-CS metabolon indicate that it is highly important to …

Laser Surface Processing For Enhanced Adhesion Between Diamond Coatings And Metallic Substrates, Zhipeng Wu

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Application of diamond coatings on metallic substrates endows them with superior properties including mechanical robustness and corrosion resistance, rendering them highly adaptable for diverse industrial and technological applications. However, significant disparities in coefficients of thermal expansion (CTEs) result in pronounced residual stress near interfaces, causing delamination of the diamond coatings. Moreover, weak chemical bonding poses a concern for certain metallic substrates. Laser surface processing techniques show promise in enhancing adhesion by altering stress distribution and improving mechanical bonding. Therefore, the research efforts described in this dissertation mainly focus on femtosecond (fs) laser texturing for enhanced adhesion of diamond coatings on …

Dynamics Of Soybean Seed Protein And Oil Content With Depth In The Canopy, Hafith Furqoni

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Understanding the physiological basis of variation in seed composition is critical for optimizing soybean seed composition. Also, studying dry matter accumulation and nitrogen uptake, partitioning, and redistribution in soybeans is crucial due to its direct impact on seed yield levels and overall plant productivity. This study aimed to test the primary proxy influencing seed protein and oil content, which is their accumulation rate determined by the assimilate supply per seed. The second objective was to comprehensively understand soybean dry matter (DM) accumulation and nitrogen (N) uptake, partitioning, and removal patterns within the canopy. Field experiments were conducted using two soybean …

Remotely Sensed Early Warning Of Algal Blooms In An Eastern Nebraska Reservoir: A Comparison Of Temporal And Spatial Indicators, Mercy Kipenda

School of Natural Resources: Dissertations, Theses, and Student Research

Cyanobacterial harmful algal blooms (CyanoHABs) detrimentally affect human, animal, and ecosystem health. Remotely sensed early warning systems for cyanoHABs in inland lakes could contribute to more proactive water quality monitoring and help mitigate negative impacts. Advances in freely available remote sensing imagery, with finer spatial, temporal, and spectral resolutions, present new opportunities for the development and comparative analysis of methods to detect sudden deterioration in lake water quality. In this thesis, I compared and tested for temporal and spatial early warning signals of cyanoHABs in field-based and remotely sensed datasets from 2019 to 2023 in Pawnee Lake in southeast Nebraska, …

Impacts Of Invasive Carp And Their Population Dynamics On Fish Communities In The Missouri River, Joshua F. Kocik

School of Natural Resources: Dissertations, Theses, and Student Research

Invasive Carp species: Silver Carp Hypophthalmichthys molitrix, Bighead Carp Hypophthalmichthys nobilis, Grass Carp Ctenopharyngodon idella, and Black Carp Mylopharyngodon piceus have both potential and realized abilities to negatively impact native species. Specifically, Bighead Carp and Silver Carp as filter feeders have been theorized to be detrimental not only to adult filter-feeding species, but to many fish which rely on plankton and algae in their early-life stages. The impact of Invasive Carp on the overall fish community remains underexplored. The fish communities below Gavins Point Dam (Invasive Carp present) and Fort Randall Dam (Invasive Carp absent) afford the …

Spatiotemporal Plasticity In Reproductive Readiness And Recruitment Of Ichthyoplankton Of Invasive Silver Carp Along A Western Invasion Front, Jessi L. Urichich

School of Natural Resources: Dissertations, Theses, and Student Research

Individuals of invasive species at the edge of their invasion distribution may exhibit enhanced reproductive capacity and phenotypic plasticity leading to accelerated range expansion. Environmental conditions in highly fluctuating environments at distribution edges may either promote or hinder such reproductive readiness and phenotypic plasticity. Dynamic habitat conditions and periodic disturbances experienced in prairie streams, such as drought (e.g., low-flow, high water temperatures), may potentially reduce suitable spawning environments and ichthyoplankton recruitment of invasive Silver Carp, potentially slowing range expansion or enabling management strategies that reduce abundance in the absence of a reproducing population. Female Silver Carp batch fecundity, Gonadosomatic Index …

Applications Of Artificial Intelligence On Drought Impact Monitoring And Assessment, Beichen Zhang

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Drought, a prevalent and consequential natural disaster, poses widespread, indirect challenges across environmental and societal dimensions. Despite considerable focus on monitoring meteorological and hydrological drought and studying their characteristics, there is a gap in assessing its multifaceted impacts, especially on societal sectors. The dissertation comprises three research essays utilizing artificial intelligence to quantitatively study multi-dimensional drought impacts. The first essay leveraged deep learning and natural language processing to predict multi-dimensional drought impacts from textual datasets, including social media, news media, and citizen scientist reports. The findings demonstrate superior performance over traditional methods and unveil the spatial and temporal heterogeneity of …

Candida Albicans Farnesol Synthesis And Secretion, Daniel J. Gutzmann

School of Biological Sciences: Dissertations, Theses, and Student Research

Candida albicans is a polymorphic fungus and opportunistic commensal found primarily in the gastrointestinal and skin of healthy individuals. Several barriers prevent C. albicans from causing disease including a healthy immune system and microbiome. When these barriers become comprised, C. albicans can transition to a pathogen and disseminate through the intestinal mucosa leading to life-threatening bloodstream and invasive infections with mortality rates of up to 64%. Morphogenic plasticity is key to this transition and impacts virulence, adaptation to different host environments, and evasion of host immune responses. One regulator of morphogenesis is farnesol. Farnesol is a secondary metabolite of …

Integration Of Matlab And Machine Learning To Accelerate Evaluation Of Biological Activity In Agricultural Soils And Promote Soil Health Improvement Goals, Andrew Stiven Ortiz Balsero

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Traditionally, assessments of soil biological activity have been confined to laboratory settings, creating a disconnect with practical in-field methods. To bridge this gap, cotton fabric degradation has been used to illustrate soil microbial activity under different management practices. While effective, these demonstrations are subjective and labor-intensive.

Researchers have explored using image processing software like ImageJ and Adobe Photoshop to streamline this process. Although these tools accurately quantified fabric degradation under varying soil conditions, the methods remained labor-intensive and complex. Consequently, these methods were still not ideal for on-farm use by agricultural practitioners.

To further address labor and complexity limitations, the …

Development And Validation Of Aronia Melanocarpa Berry Recipes For Home Canning: Integrating Thermal Lethality Studies, Microbiological Safety, And Antioxidant Analysis, Juan Diego Villegas Posada

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Aronia melanocarpa, also known as chokeberry, is gaining popularity for its high antioxidant content and health benefits, including reducing oxidative stress and inhibiting cancer gene expression. However, its characteristic bitterness and astringency limit its broader appeal. Chokeberry's low pH places it in the acid foods category, making it ideal for safe home canning. An acidic environment combined with heat treatment inhibits harmful bacteria like Clostridium botulinum. Home canning preserves food by sealing it in airtight containers and heating it to destroy spoilage microorganisms.

Developing safe and palatable recipes is essential for making chokeberries suitable for home canning. A …

Candida Albicans Farnesol Synthesis And Secretion, Daniel John Gutzmann

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Candida albicans is a polymorphic fungus and opportunistic commensal found primarily in the gastrointestinal and skin of healthy individuals. Several barriers prevent C. albicans from causing disease including a healthy immune system and microbiome. When these barriers become comprised, C. albicans can transition to a pathogen and disseminate through the intestinal mucosa leading to life-threatening bloodstream and invasive infections with mortality rates of up to 64%. Morphogenic plasticity is key to this transition and impacts virulence, adaptation to different host environments, and evasion of host immune responses. One regulator of morphogenesis is farnesol. Farnesol is a secondary metabolite …

Praying To Tiktok, Seeking The Self: How Rhetoric Reveals And Conceals The World’S Most Powerful Guru Of The Postindustrial Age, Samantha L. Gillespie-Hoffman

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Imagine a world where the most powerful leader is a wellness guru that runs an elaborate church with millions of followers. The guru is so powerful that everyone believes they can read minds and make ordinary people rich and famous. The guru controls forms of communication, media channels, consumer tastes, and what people eat, drink, say, and even think. What if this guru was not human but actually an algorithm? Does this sound like the plot of a science fiction novel? I argue that this scenario is closer to reality than most will admit. In this project, readers encounter a …

Phylogenetic And Biogeographic Patterns Of Devonian Proetid Trilobites, Katherine Jane Jordan

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Ecological disruption events such as mass extinctions can result in the permanent alteration in clades and ecosystems. A pivotal time of change during the history of life on Earth can be seen in the Devonian Period. During this time, major transitions in marine and terrestrial system resulted in a different world at the end of the period in comparison to the beginning. One such group most heavily impacted were trilobites. Trilobites were reduced to one order by the end of the Devonian: Proetida. My dissertation focuses on phylogenetic, biogeographic, and paleocommunity patterns of this group, known as the last of …

Ultrashort Pulsed Laser Treatment Is Effective At Sterilizing Metal Surfaces For Planetary Protection, Kaleb Mcquillan

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

To prevent forward contamination from microbes aboard spacecraft intended for exploration of solar system bodies there is a need for effective sterilization methods. However, current techniques are both time-consuming and expensive. For example, dry heat sterilization requires removal from the assembly site and several days of treatment. Furthermore, some components such as optics and electronics are not compatible with current sterilization techniques. In this thesis, a novel femtosecond laser surface processing technique for the rapid sterilization of spacecraft hardware is reported. Femtosecond lasers produce extremely high photon fluxes (10²⁹ photons/s*cm², ~0.03 J/cm²) in extremely short …

Microbial Transfer And Cross-Contamination In Milling Facilities And Pathogen Survival In Milled Products And Baking Mixes, Aryany Leticia Peña-Gomez

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Wheat-based products, traditionally considered low-risk due to their low moisture content, have been involved in numerous foodborne outbreaks in recent decades. Salmonella and Shiga toxin-producing Escherichia coli (STEC) present in these products have caused significant numbers of hospitalizations and massive product recalls. The microbiological quality of flour is highly dependent on the incoming wheat, which is vulnerable to contamination from field to milling. Once pathogens are present in flour, they can survive for extended periods. Implementing strategies to mitigate the risk of pathogen contamination throughout the wheat processing chain is critical.

This study evaluated the distribution of E. coli …

The Effect Of Fat Content On The Inactivation And Recovery Of Listeria Spp. In Ready-To-Eat Foods After High Pressure Processing, Yhuliana Kattalina Niño Fuerte

Department of Food Science and Technology: Dissertations, Theses, and Student Research

High-pressure processing (HPP) is recognized by the United States Department of Agriculture Food Safety and Inspection Service (USDA FSIS) as a post-lethality treatment to control Listeria monocytogenes in ready-to-eat (RTE) meat and poultry products. A scoping review of 603 journal articles, which ultimately was narrowed down to 16 articles, revealed that the efficacy of HPP varies with fat content. The studies demonstrated that L. monocytogenes inactivation by HPP tends to be lower in RTE meats with greater than 5% fat content, compared to products with lower than 5% fat. The wide range of HPP parameters used in these studies …

Information About Honey Fraud: Implications Of Information Choice For Consumer Behavior, Christopher R. Gustafson

Cornhusker Economics

The study highlights that standard research practice—exposing participants to information—may not capture what will happen outside of the lab when people have a choice about what to read, view, or do with their time. While we found that having participants read about honey fraud significantly shifted their willingness to pay for local and domestic versus imported honey, we did not find those changes when people were able to select a text to read.

The implications of these findings extend beyond the issue of honey fraud to broader contexts of food safety, nutrition, and production techniques. While people have preferences for …