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Performance Of Acoustic Telemetry And Space Use Of Pallid Sturgeon In The Lower Platte River, Nebraska, Christopher F. Pullano

School of Natural Resources: Dissertations, Theses, and Student Research

Pallid Sturgeon (Scaphirhynchus albus) are centenarian, potamodromous, rheophiles that historically occupied the Missouri River and Mississippi River basins. Listed on the U.S. Endangered Species Act in 1990, population declines are attributed to habitat fragmentation and degradation, as well as overharvest, and hybridization. A knowledge gap exists regarding the extent to which tributaries facilitate key life stages for Pallid Sturgeon. This study evaluated the capacity of acoustic telemetry to monitor the movements of Pallid Sturgeon in a shallow, braided tributary to the Missouri River. The specific objectives were to (1) evaluate the environmental variables influencing the performance of acoustic …

Spatial Ecology Of American Bison On Vermejo Park Ranch, New Mexico, Kate Ann Asmus

School of Natural Resources: Dissertations, Theses, and Student Research

American bison (Bison bison) are a keystone species that impact grassland productivity, plant diversity, and landscape heterogeneity. We used GPS telemetry and a replicate herbivore grazing experiment on Vermejo Park Ranch in northeastern New Mexico to advance understanding of bison spatial ecology and grazing dynamics. First, we evaluated the potentially disparate influences of forage productivity and site fidelity on the size and selection of home ranges of bison. Home range size was strongly negatively influenced by forage productivity. However, home range selection was influenced more strongly by site fidelity than spatial variation in forage, as bison selected home …

Vale Strategic Audit, Nikolas Mancio

Honors Program: Senior Projects (Public)

The Chinese government is critical in shaping the global mining and metals industry, specifically for companies like Vale S.A., the world’s largest iron ore and nickel producer. China’s dominance as the largest importer of iron ore significantly impacts commodity prices and demand, with its government exerting substantial influence through production quotas, infrastructure spending, and environmental regulations. Vale’s strategic position in the Chinese market is a cornerstone of its operations. It is supported by investments in distribution centers, blending facilities, and high-grade iron ore that align with China’s environmental goals. However, this reliance also makes Vale vulnerable to shifts in Chinese …

Assessing Reproducibility Challenges In Clinical Metabolics, Darcy Lin Cochran

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Current metabolomics research is expanding to be multiplatform and interdisciplinary. Metabolomic analysis has the potential to provide detailed insight into any biological system of interest to analyze the underlying molecular mechanisms of variables like environment, disease, and genetics. Human clinical metabolomics is a major research area that is often focused on finding biomarkers or panels of biomarkers for different diseases. However, results are difficult to compare across different laboratories since the field of metabolomics has yet to widely adopt best practices for sample preparation, data acquisition and data processing, results are difficult to compare across different laboratories.

This thesis focuses …

Controller Software: Evolution, Identification, And Implementation, Balaji Balasubramaniam

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

In the annals of automation history and advancement, one can find control technology is at the core. Modern-day controllers rely heavily on software capability to provide stability and improve the system's performance. In particular, drone flight controllers use autopilot control software to accomplish autonomous navigation from take-off to landing. However, we know very little about how the controller code modifications and its impact, particularly at the software level. No general framework has been developed to identify the control code changes and observe the real values of software control loops at the kernel layer.

In this thesis, we lay the foundation …

Mining Work Items To Streamline Software Maintenance Tasks, Salomé Perez-Rosero

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Software engineering maintenance tasks often require associating code changes into groupings of related units of work to have as much information as possible about the developments toward addressing a specific code task. A comprehensive understanding of how a code task has evolved helps developers make better decisions about changes in the overall codebase, where a commit represents the set of code changes made to the codebase at a specific time. While the concept of work items as logically related code changes has been primarily theoretical, its impact on software maintenance tasks, such as tracing the origins of bugs or fixes …

Growing Industry-University Partnerships: Virtual Workshop On Industry Sponsored Research, Mark Stone, Santosh K. Pitla

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

The Department of Biological Systems Engineering (BSE) at the University of Nebraska-Lincoln (UNL) hosted a virtual workshop on developing capacity for industry-sponsored research (ISR). This dynamic event brought together faculty, researchers, industry leaders, and students to explore innovative strategies for advancing ISR.

The workshop addressed four key themes: (1) fostering sustainable industry-academic partnerships; (2) tackling intellectual property (IP) challenges; (3) building institutional and individual capacity for ISR, and (4) empowering students as critical contributors to industry research. Through expert-led presentations, an engaging panel discussion, and interactive brainstorming sessions, participants identified actionable steps and articulated a vision for the future of …

Gamma Sigma Delta, Nebraska Chapter Newsletter, Issue #66 December 2024

Gamma Sigma Delta, Nebraska Chapter: Newsletters

Nominations Solicitations Issue

President's Message, John R. Ruberson

Members

Grad Student Award

Teaching Award

Research Award

Extension Award

Award of Merit

Annual Membership Info

Student Award Fund

In Memoriam: John L. Lambert (April 25, 1942-July 3, 2024), Larry Elmer Germer (April 24, 1941-October 25, 2024), Leo Lucas (1931-November 13, 2024)

Pledge

Relationship Between Host Genomics And Microbiomics In Beef Cattle, Andrew D. Lakamp

Department of Animal Science: Dissertations, Theses, and Student Research

As sequencing technology becomes more affordable and throughput increases, microbiome information is becoming more readily available. For beef cattle selection, microbial information has a variety of uses including being a target for genetic prediction or used as a means to explicitly describe additional phenotypic variability in other traits.

Infectious bovine keratoconjunctivitis (IBK), commonly known as pinkeye, is a disease that infects the ocular surface and surrounding tissue which is an animal health and producer economic concern. Vaccinations have shown to have variable effectiveness, while limited genetics studies have suggested that direct genetic selection for resistance would be slow. Therefore, an …

Virtual Control: A Comparison Of Methods For Hand-Tracking Implementation, Nathan Roberts

Honors Program: Senior Projects (Public)

This thesis examines the design philosophy of modern virtual reality applications that utilize hand-tracking as a primary form of user input. The analysis presented hopes to provide ideas for future implementations of this technology so that more immersive experiences are developed. This analysis starts with the discussion of a modern example of successful hand-tracking implementation, then comparing that implementation to a recent senior design project. This comparison is primarily based on each experience’s ability to create interactivity and immediacy. Interactivity is the degree to which the user can quickly and reliably make changes to their virtual environment, while immediacy is …

Nebraska Department Of Transportation Strategic Audit, Chloe Hoover

Honors Program: Senior Projects (Public)

The Nebraska Department of Transportation (NDOT) is a state government agency that is responsible for the planning, development, design, construction, maintenance, and administration of the state highway system. Two strategic analyses are completed about NDOT: a PESTEL analysis and Porter’s Five Forces analysis. Both of these analyses showed that since NDOT is a state agency, it impacts foundational aspects of its strategy. NDOT’s strategy is influenced by its financial strategy, policies or political influence, and public importance. NDOT competes with other companies in its workforce and employees and/or applicants leaving NDOT for other companies. This report details NDOT’s strategy, competitive …

Argument Schema Of Undergraduate Engineering Students, Anu Singh

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Critical thinking is one of the most desired skills in the workplace, as it assists an individual in solving complex problems and making informed decisions, resulting in their workplace success. Argumentation is one instructional approach that provides students an opportunity to engage in higher-order thinking and improve their communication skills. Argumentative writing provides opportunities to engage in multiple perspectives of a problem, provide evidence for the claim, evaluate evidence, engage in reasoning, and acknowledge self-bias, which automatically engages students in critical thinking. Previous literature has shown that despite the use of interventions and scaffolding approaches, students' argumentative texts lack elements …

Dissecting Metabolic Landscape Of Alveolar Macrophage, Sunayana Malla

Department of Chemical and Biomolecular Engineering: Dissertations, Theses, and Student Research

The highly plastic nature of alveolar macrophage (AM) plays a crucial role in the defense against inhaled particulates and pathogens in the lungs. Depending on the signal, AM acquires either the classically activated M1 phenotype or the alternatively activated M2 phenotype. In this study, we investigate the metabolic shift in the activated phases of AM (M1 and M2 phases) by reconstructing context specific genome-scale metabolic (GSM) models. Metabolic pathways such as pyruvate metabolism, arachidonic acid metabolism, chondroitin/heparan sulfate biosynthesis, and heparan sulfate degradation are found to be important driving forces in the development of the M1/M2 phenotypes. Additionally, we formulated …

Microbiome Variation In Production Phenotypes And The Role Of Colonization History In Microbiome Establishment, Seidu Adams

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Ruminant-based agriculture is expected to continue to be a major contributor to food security to feed the growing population. At the heart of nutrient degradation of complex organic matter within the rumen are its microbes. These microbes can convert otherwise unusable organic matter into usable protein and energy and can provide up to 50% of the animal’s protein needs and up to 70% of the energy needs. The microbial functional capacity within the rumen determines the nutrients utilized and the end products of fermentation. However, our understanding of microbial functional capacity within the rumen and factors that influence the rumen …

Domain-Specific Machine Learning Approaches For Geospatial Problems, Shine Bedi

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation explores novel algorithms for complex geospatial problems at the intersection of environmental, social, and computational sciences. Emphasizing the unique challenges of the geospatial domain, particularly the deviation from the independent and identical distribution (IID) assumption, the research spans various methodologies across different domains, demonstrating the benefits of specialized approaches in spatial analysis.

First, we show that machine learning techniques can be effectively used in environmental modeling, which often has severe class imbalance challenges. Using artificial neural networks (ANN), support vector machines (SVM), and extreme gradient boosting (XGB) and techniques to address class imbalance provides insights into groundwater quality …

Dynamics Of Flexible Freestanding Structures Under Ground Motion Excitation, Seyed Mohammadreza Farooghi Mehr

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Freestanding structures are characterized by being unattached at the base, exhibiting rigid or flexible motion under ground motion excitation with various potential responses including rocking (rotation at the base about corner points), pure sliding, slide-rocking, and overturning. While rigid freestanding structures have been extensively studied, the behavior of flexible freestanding structures—particularly the interaction between modes involving sliding—remains underexplored. Existing literature has focused on the deformation and rocking motions of flexible freestanding structures through both analytical and experimental approaches, which have shown indications of sliding at the base. These findings highlight the necessity of incorporating sliding motion into analytical models to …

Deep Learning Vision-Based Bridge Inspection With Resource-Constrained Unmanned Aircraft Systems, Ji Young Lee

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Bridge inspection is critical for ensuring structural integrity, extending the service life of infrastructure, and minimizing maintenance costs. As bridges age and endure increasing loads, regular inspections help detect early signs of wear, such as cracks or corrosion, that could impact safety and performance. However, traditional inspection methods are labor-intensive, requiring significant time, specialized equipment, and manual access to challenging areas, which can lead to costly disruptions. Additionally, reliance on human inspectors introduces subjectivity, with assessments varying by individual expertise. These factors highlight the inefficiencies and safety risks in current inspection practices, underscoring the need for more objective, efficient solutions. …

Improving Thermionic Power Generation Via The Reduction Of Emission Barriers, Chace E. Franey

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

This thesis investigates methods to improve the performance of thermionic energy converters (TECs) by reducing the emission barriers. A TEC generates electricity from thermal energy when electrons are emitted from a hot electrode (the emitter) through a vacuum gap and absorbed by a cooler electrode (the collector). Due to their lack of working fluids and inherently compact nature, TECs have garnered attention over the years for their potential as a means of power generation in space or high-grade waste heat recovery. Historically, however, the practical implementation of TECs has been hindered by significant technical challenges. Recent advancements in microfabrication techniques …

Electrochemical Treatment Of Mining And Oilfield Wastewater Using Recycled Titanium Alloy Electrodes, Sean Michael Thompsen

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

This thesis explores the integration of circular economy principles into wastewater treatment through the innovative use of recycled Ti-6Al-4V titanium alloy electrodes. By repurposing titanium alloys from metal additive manufacturing (AM) waste, the research aims to address the treatment of acidic and oil-contaminated industrial wastewater in a sustainable manner. The recycled electrodes demonstrate notable stability and fouling resistance in challenging acidic conditions, attributed to their unique surface porosity and conductive properties. Electrochemical processes, including hydrogen evolution at the cathode, facilitate metal ion precipitation and destabilize surfactant-stabilized oil droplets. Cyclic voltammetry and long-term stability tests highlight the electrodes’ resilience, providing an …

Development Of A Surface-Mounted Strong Post For The Midwest Guardrail System, Gnyarienn Selva Kumar

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

This research investigated the development of a surface-mounted strong post for the Midwest Guardrail System (MGS), designed to replicate the behavior of the standard MGS post, a W6 x8.5, 72-in. long post embedded 40 in. into strong soil. The MGS is a strong post, W-beam guardrail system that has been successfully evaluated in many applications using crashworthiness criteria described in the American Association of State Highway and Transportation Officials (AASHTO) Manual for Assessing Safety Hardware (MASH). However, in some locations, conventional soil-embedded posts are impossible to install due to subgrade obstructions like concrete slabs, mow strips, utilities, and limited right-of-way. …

Prevalence Of Autism Spectrum Characteristics In Students Taking Undergraduate Computing Courses, Rachel Michaela Mettenbrink

School of Computing: Dissertations, Theses, and Student Research

The incidence rate of autism spectrum condition (ASC) has increased significantly in recent decades, as awareness of the condition and its impacts increases amongst clinicians, parents, and the general population. Medical literature has proposed that there may be a relationship between ASC and participation in the computing field. This study tests for the prevalence of autism spectrum condition traits measured by delivering the Autism Spectrum Quotient (AQ) to a population of undergraduate computer science students. We examine the relationships between AQ scores and students taking undergraduate computer science classes, sex, socioeconomic status, and parents in the computing industry. Additionally, we …

Exploring Variably Saturated Flow Formulations For Modflow: Implementing A Fully 3d Richards' Equation In Modflow 6, Sebastian Vazquez-Gasty

Department of Civil and Environmental Engineering: Dissertations, Theses, and Student Research

This thesis explores the implementation of a fully 3D Richards’ equation solution into MODFLOW 6 to solve for saturated/unsaturated flow. Currently, MODFLOW 6 has limited capability for solving unsaturated zone flow problems by using the Unsaturated Zone Flow (UZF) package, which neglects capillarity and assumes vertical 1-dimensional flow. Various formulations of the Richards’ equation were first evaluated for their strengths and weaknesses. Various numerical solution approaches to Richards’ equation were also studied to understand the robustness and efficiency of different approaches and to select one that would best fit into the MODFLOW 6 framework. The MODFLOW 6 framework was also …

United States Department Of Defense Response To The Office Of Science And Technology Policy Memo, 2022: Public Access Plan (December 2024)

Copyright, Fair Use, Scholarly Communication, etc.

DOD response to OSTP memo, 2022: Public Access Plan (December 2024)

Investigation Of Conductive Die-Top Thermal Capacitors During Short Circuit Operation Of Silicon Carbide Devices, Youssef Abotaleb

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Silicon carbide (SiC) power devices have garnered significant attention in recent years due to their superior thermal and electrical properties compared to traditional silicon devices. However, SiC power devices suffer from severe reliability issues arising from their mechanical properties. This is because the Young's modulus of SiC is about three times larger than that of silicon, which correspondingly raises the mechanical stresses acting on the bonding structure, often leading to device failure under power shock events.

Traditional packaging materials and designs tend to constrain SiC performance, as hot-spot temperature resulting from a power shock is one of the key factors …

Student Comprehension Of Biochemistry In A Flipped Classroom Format, Ed Harris, Evan A. Schroder, Teryn J. Berks

Department of Biochemistry: Faculty Publications

Concept-heavy courses such as Biochemistry in life and physical science curricula are challenging for many college-aged students. It is easy for students to disengage in a lecture and not learn the subject matter while in class. To improve student learning and participation, we employed a flipped format for the first half of the course and compared learning outcomes and attitudes with the traditional lecture in the second half of the course. The experimental course was an upper-level biochemistry course taken primarily by juniors (49%), seniors (40%), and some graduate students (10%) at the college level. Our results indicate that lower-performing …

Porcine Peritoneal Macrophages Are Susceptible To Porcine Reproductive And Respiratory Syndrome Virus Infection, Kassandra Durazo-Martinez, Jayeshbhai Chaudhari, Sushmita Kumari, Hiep Vu

Department of Animal Science: Faculty Publications

Previous studies have suggested that porcine peritoneal macrophages (PPMs) are resistant to PRRSV infection, whereas porcine alveolar macrophages (PAMs) are highly susceptible. This contrast is intriguing, as both cell types belong to the same monocyte/macrophage family. The current study aimed to investigate the host factors contributing to the differing susceptibility of PPMs and PAMs to PRRSV infection. We found that PPMs exhibit a higher frequency of CD14+ cells compared to PAMs, suggesting a more immature macrophage phenotype in PPMs. Importantly, PPMs expressed both CD163 and CD169, the key receptors for PRRSV entry, although the frequency and intensity of CD163 and …

Association Between In Situ Ventilation And Human-Generated Aerosol Exposure In Meatpacking Plants During The Covid-19 Pandemic, Joshua L. Santarpia, Josephine Lau, Debayan Shom, Shanna A. Ratnesar-Shumate, Eric C. Carnes, Gearge W. Santarpia, Vicki L. Herrera, Danielle N. Rivera, Daniel N. Ackerman, Ashley R. Ravnholdt, John J. Lowe, Athena K. Ramos

Durham School of Architectural Engineering and Construction: Faculty Publications

During the COVID-19 pandemic, meatpacking workers were disproportionately affected by disease. Large outbreaks at meatpacking facilities resulted in loss of life and threatened the well-being of workers across the globe. Much work was done throughout the pandemic to understand and prevent these outbreaks. This study combined ventilation system evaluation and measurement of human-generated respiratory aerosol to investigate and identify areas of highest risk for disease transmission. These findings confirm that improved ventilation reduces exposure to human-generated aerosols in meatpacking facilities, including those that may contain infectious agents, such as SARS-CoV-2. This study suggests areas of greatest risk are likely areas …

Disentangling Genotype And Environment Specific Latent Features For Improved Trait Prediction Using A Compositional Autoencoder, Anirudha Powadi, Talukder Zaki Jubery, Michael C. Tross, James C. Schnable, Baskar Ganapathysubramanian

Department of Agronomy and Horticulture: Faculty Publications

In plant breeding and genetics, predictive models traditionally rely on compact representations of high-dimensional data, often using methods like Principal Component Analysis (PCA) and, more recently, Autoencoders (AE). However, these methods do not separate genotype-specific and environment-specific features, limiting their ability to accurately predict traits influenced by both genetic and environmental factors. We hypothesize that disentangling these representations into genotype-specific and environment-specific components can enhance predictive models. To test this, we developed a compositional autoencoder (CAE) that decomposes high-dimensional data into distinct genotype-specific and environment-specific latent features. Our CAE framework employed a hierarchical architecture within an autoencoder to effectively separate …

Industrial Hemp Biomass Negatively Affected By Herbicide Drift From Corn And Soybean Herbicides, Milos Zaric, Bruno Canella Vieira, Barbara Houston, Guilherme Sousa Alves, Samuel E. Wortman, Julie A. Peterson, Greg R. Kruger

Department of Agronomy and Horticulture: Faculty Publications

The establishment of industrial hemp (Cannabis sativa L.) fields near row crops has raised concerns about the potential adverse effects of herbicide drift on hemp production. This study examined hemp susceptibility to drift of herbicides registered for use in corn and/or soybeans. Herbicide solutions (2,4-D, dicamba, glufosinate, glyphosate, imazethapyr, lactofen, mesotrione) were applied separately in the wind tunnel (3.6 m s⁻¹ airspeed), simulating drift scenarios, with conventional TP95015EVS (TP) and air inclusion AI95015EVS (AI) flat fan nozzles calibrated to deliver 140 L ha⁻¹ carrier volume at 230 kPa. Mylar cards and hemp plants (20–25 cm tall) were placed …

Feasibility Of Technical Solutions For The Detection Of Falsified Images In Research, Phill Jones, Hylke Koers

Copyright, Fair Use, Scholarly Communication, etc.

In this report, we discuss the findings of an investigation into the feasibility of developing a research image integrity system. The focus was primarily on immunohistochemistry blots and microscopy images, although the findings are relevant to other types of research images such as gel blots and spectroscopy, geophysical, or astronomical images, as well as to any digital data type. The investigation comprised a mix of desk research and semi-structured (anonymized) interviews with nine stakeholders representing publishers, researchers, technologists, and microscopy companies.

We found that it would be possible to implement a system to assert image integrity and that the technology …