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Mapping The Ecology Of Information: Hierarchical Habitat Selection By Nebraska Pheasant Hunters, Lyndsie Wszola

School of Natural Resources: Dissertations, Theses, and Student Research

Hunting regulations are assumed to moderate the effects of hunting consistently across a game population. A growing body of evidence suggests that hunter effort varies temporally and spatially, and that variation in effort at multiple spatial scales can affect game populations in unexpected ways. We set out to determine the causes of variation in hunting effort among ring-necked pheasant (Phasianus colchicus) hunters at four spatial scales: among regions within the state of Nebraska, among sites within a given region, among access points at a given site, and among habitat patches within a site. At each scale, pheasant hunters used direct …

Understanding Cigarette Butt Littering Behavior On Public Beaches: A Case Study Of Jekyll Island, Georgia, Maranda R. Miller

School of Natural Resources: Dissertations, Theses, and Student Research

The world’s natural environment is degrading, and human behavior is a leading cause. Therefore, in order to address environmental problems it is important to understand the factors driving environmentally degrading behaviors and subsequently design behavioral interventions to alter undesirable behaviors.

One environmental issue of particular concern is toxins leeching from trash. Specifically, cigarette butts are of concern due to their prevalence in the environment. Cigarette butt discarding behavior is affected by personal attributes, but data regarding which personal attributes and how these affect discarding behavior is lacking. This thesis seeks to understand cigarette butt disposal on public beaches by exploring …

Soil Ecosystem Service Tradeoffs And Social–Ecological Resilience In The North Central Great Plains, Hannah E. Birge

School of Natural Resources: Dissertations, Theses, and Student Research

Humans seek to improve their wellbeing by altering ecological processes to maximize the output of specific ecosystem services, which often leave the system vulnerable to unintended and undesirable side effects. Ecosystem services emerge from complex interactions among ecological structures and processes occurring at multiple scales. The degree to which an ecosystem maintains a predictable range of structures and processes in the face of disturbance can be described as its resilience. The 1930s Dust Bowl of the North American Great Plains is an example of a system reconfiguration and loss of resilience that was ultimately driven by human optimization for a …

Enantioselective Γ- And Δ -Borylation Of Unsaturated Carbonyl Derivatives: Synthesis, Mechanistic Insights, And Applications, Gia L. Hoang

Department of Chemistry: Dissertations, Theses, and Student Research

Chiral boronic esters are valuable synthetic intermediates widely used in a variety of stereospecific transformations. Transition metal-catalyzed asymmetric hydroboration (CAHB) of alkenes is among the most popular methods for their preparation. Enantioselective hydroboration of activated alkenes (i.e., vinyl arene derivatives or conjugated carbonyl compounds) have been extensively studied by many research groups. We, on the other hand, are interested in enantioselective hydroboration of unactivated alkenes utilizing coordinating functional groups (e.g., carbonyl derivatives) to give functionalized, chiral boronic esters. While conjugate addition and C–H activation methodologies provide efficient alternatives to CAHB for enantioselective beta-borylation of carbonyl compounds, direct gamma- and delta-borylations …

Herons And Egrets, Michael D. Hoy

Wildlife Damage Management Technical Series

Human-Wildlife Conflicts

Landscapes -- Herons and egrets commonly cause damage at aquaculture facilities and recreational fishing waters where fish are held at high densities. In one study, on average wading birds consumed from 4 to 24 golden shiners per day at minnow production facilities in Arkansas. Great blue herons and great egrets commonly feed at catfish production facilities in Mississippi. The tendency for herons and egrets to congregate in large feeding flocks often leads to extensive loss of fish at aquaculture facilities. Fish-eating birds also can have an impact on intensively managed sport fisheries. Damage occurs when herons and egrets …

Frequency Sensitive Mechanism In Low-Intensity Ultrasound Enhanced Bioeffects, April D. Miller, Abdoulkadri Chama, Tobias M. Louw, Anuradha Subramanian, Hendrik J. Viljoen

Department of Chemical and Biomolecular Engineering: Faculty Publications

This study presents two novel theoretical models to elucidate frequency sensitive nuclear mechanisms in low-intensity ultrasound enhanced bioeffects. In contrast to the typical 1.5 MHz pulsed ultrasound regime, our group previously experimentally confirmed that ultrasound stimulation of anchored chondrocytes at resonant frequency maximized gene expression of load inducible genes which are regulatory markers for cellular response to external stimuli. However, ERK phosphorylation displayed no frequency dependency, suggesting that the biochemical mechanisms involved in enhanced gene expression is downstream of ERK phosphorylation. To elucidate such underlying mechanisms, this study presents a theoretical model of an anchored cell, representing an in vitro …

Msh1-Mediated Non-Genetic Phenotypic Variation In Plants: Prospects For Epigenetic Breeding In Sorghum Bicolor, Dikungwa Ketumile

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Sorghum is the fifth most important cereal crop grown in the world, and is the primary staple food for many people in developing countries. Like other major crops, its improvement is constrained by depletion of genetic diversity within breeding germplasm. Investigated in this study is the unique creation of non-genetic phenotypic variation through altering MutS Homolog1 (MSH1), a plant-specific gene, and the potential it presents for sorghum improvement. Suppression of MSH1 results in non-genetic developmental reprogramming. The derived MSH1 memory lines, when used in crossing, result in heritable phenotypic variation that enhances plant vigor and agronomic performance. A …

Analysis Of Cereal Aphid Feeding Behavior And Transcriptional Responses Underlying Switchgrass–Aphid Interactions, Kyle G. Koch

Department of Entomology: Dissertations, Theses, and Student Research

Switchgrass, Panicum virgatum L., is a perennial warm-season grass that is a model species for the development of bioenergy crops. However, the sustainability of switchgrass as a bioenergy feedstock will require efforts directed at improved biomass yield under a variety of stress factors. The objectives of this research were to: (1) elucidate greenbug and yellow sugarcane aphid feeding behavior on resistant and susceptible switchgrasses using electronic penetration graphs (EPG), (2) define transcriptional changes before and during insect feeding through RNA-seq to identify candidate resistance genes in a hybrid switchgrass cultivar, and (3) utilize methods in RNA sequencing of insects to …

Comparison Of Aquaponics And Hydroponics On Basil (Ocimum Basilicum) Morphometrics And Essential Oil Composition, Lauren E. Wilson, Nathan C. Duncan, D. Andrew Crain

RURALS: Review of Undergraduate Research in Agricultural and Life Sciences

Soilless farming, though in practice for over two millennia, is becoming more prevalent in modern food production as it not only saves water and space but also provides an effective option for indoor urban farming. There are currently two major models of soilless farming—hydroponics and aquaponics. While both systems are effective methods, very few studies compare the two systems. The objective of this study was to compare the water quality, basil (Ocimum basilicum) productivity, and basil essential oil profiles from plants grown in a hydroponic and newly established aquaponic system. Basil plants from two age groups (young plants …

A Parapoxviral Virion Protein Inhibits Nf-Κb Signaling Early In Infection, Sushil Khatiwada, Gustavo A. Delhon, Ponnuraj Nagendraprabhu, Sabal Chaulagain, Shuhong Luo, Diego G. Diel, Eduardo F. Flores, D. L. Rock

School of Veterinary and Biomedical Sciences: Faculty Publications

Poxviruses have evolved unique proteins and mechanisms to counteract the nuclear factor κB (NF-κB) signaling pathway, which is an essential regulatory pathway of host innate immune responses. Here, we describe a NF-κB inhibitory virion protein of orf virus (ORFV), ORFV073, which functions very early in infected cells. Infection with ORFV073 gene deletion virus (OV-IA82Δ073) led to increased accumulation of NF-κB essential modulator (NEMO), marked phosphorylation of IκB kinase (IKK) subunits IKKα and IKKβ, IκBα and NF-κB subunit p65 (NF-κB-p65), and to early nuclear translocation of NF-κB-p65 in virusinfected cells (30 min post infection). Expression of ORFV073 alone was sufficient to …

Geographical Variation In Community Divergence: Insights From Tropical Forest Monodominance By Ectomycorrhizal Trees*, Tadashi Fukami, Mifuyu Nakajima, Claire Fortunel, Paul V. Fine, Christopher Baraloto, Sabrina E. Russo, Kabir G. Peay

School of Biological Sciences: Faculty Publications

Convergence occurs in both species traits and community structure, but how convergence at the two scales influences each other remains unclear. To address this question, we focus on tropical forest monodominance, in which a single, often ectomycorrhizal (EM) tree species occasionally dominates forest stands within a landscape otherwise characterized by diverse communities of arbuscular mycorrhizal (AM) trees. Such monodominance is a striking potential example of community divergence resulting in alternative stable states. However, it is observed only in some tropical regions. A diverse suite of AM and EM trees locally codominate forest stands elsewhere. We develop a hypothesis to explain …

The Effects Of Supplemental Rup In Corn Silage Growing Diets And Rup Digestibility Of Corn Silage, The Utilization Of Aggressive Implant Protocols, And The Effect Of Inoculate On Corn Silage And High Moisture Corn, Colton Ray Oney

Department of Animal Science: Dissertations, Theses, and Student Research

Three experiments evaluated the effect of implant strategies on feedlot performance and carcass characteristics of crossbred steers and Holstein steers. Final BW, ADG, and G:F were not different between implant strategies in Exp. 1 and 2. The utilization of more aggressive implant strategies has minimal impact on both feedlot and carcass performance of cross breed steers.

Four experiments evaluated the effects of supplemental RUP in corn silage growing diets and RUP content and RUP digestibility of corn silage. Exp. 1, supplemented five concentrations of RUP to growing calves consuming a corn silage diet. As supplemental RUP increased ADG and ending …

Effect Of Fat And Fiber On Methane Production And Energy Utilization In Lactating Dairy Cows, Olivia Rose Drehmel

Department of Animal Science: Dissertations, Theses, and Student Research

Due to rising concerns of greenhouse gases and that ruminants are the largest livestock methane producers, an emphasis has been put on developing methane mitigation strategies to reduce methane emissions in ruminants. Other than reducing methane, maximizing the energy utilization of cattle is also important for producer’s overall productivity and profitability.

In the first experiment, fat or cellulose was added to fiber isolated from dried distiller’s grains and solubles. Isolated NDF residue from an in vitro setting was fermented 1) alone (control); 2) with feed grade corn oil at 20%; or 3) with cellulose powder microcrystalline at 20% using the …

Examination Of Contribution Of Pentose Catabolism To Molecular Hydrogen Formation By Targeted Disruption Of Arabinose Isomerase (Araa) In The Hyperthermophilic Bacterium, Thermotoga Maritima, Derrick White

School of Biological Sciences: Dissertations, Theses, and Student Research

Thermotoga maritima ferments a broad range of sugars to form acetate, carbon dioxide, traces of lactate and near theoretic yields of molecular hydrogen (H₂). In this organism, the catabolism of pentose sugars such as arabinose depends on the interaction between the pentose phosphate, Embden Myerhoff and Entner Doudoroff pathways. While values for H₂ yield have been determined using pentose supplemented complex media (CM) and predicted by metabolic pathway reconstruction, quantitative in vivo measurements derived from pathway elimination have not been reported reflecting the lack of a genetic method for the creation of targeted mutations. Here, a spontaneous …

Advancing Chemical Characterization Of Feedstuffs Commonly Included In Dairy Cow Rations, Ellan I. Dufour

Department of Animal Science: Dissertations, Theses, and Student Research

Chemical composition of feedstuffs commonly included in dairy cow rations is variable within a feed type, which raises a potential for nutrient inadequacies for an animal. There are multiple methods to characterize and determine chemical composition including in vitro and in situ methods, as well as refining processing procedures to produce a consistent feed product. Feed component digestibilities can also be evaluated using similar methods.

Research reported in Chapter 2 focuses on characterizing chemical composition and determining the digestibility of fiber and protein fractions of corn dried distillers grains with solubles (DDGS) originating from seven different production sites across Michigan, …

Promoting Gastrointestinal Health And Decreasing Inflammation With Whole Grains In Comparison To Fruit And Vegetables Through Clinical Interventions And In Vitro Tests, Julianne Kopf

Department of Food Science and Technology: Dissertations, Theses, and Student Research

The incidence of metabolic syndrome and its side effects are increasing throughout the world. Diet plays a key role in reducing the risk of metabolic syndrome, possibly mediated by metabolic activity of the gut microbiota. Whole grains (WG) and fruits and vegetables (FV) are two food groups that are commonly promoted for their ability to reduce the risk of metabolic syndrome. However, these two food groups provide vastly different nutrients that likely impact health via different mechanisms. Therefore, the primary objective of this research was to determine the impact of consuming recommended amounts of whole grains and fruit and vegetables …

Assessment Of The Campus Food Environment Using Components Of The Healthy Campus Environmental Audit, Candace Sorden

Department of Nutrition and Health Sciences: Dissertations, Theses, and Student Research

The objective was to assess whether the food environment at the University of Nebraska-Lincoln (UNL) campuses supports healthy eating behaviors using components of the Healthy Campus Environmental Audit (vending, dining, and convenience store audits). Secondary aims were to compare the UNL food environment to other college campuses and explore whether there are existing health promotion and obesity prevention initiatives, programs, pledges and/or policies at UNL.

Research team members accessed a secure online website to review training materials prepared by Syracuse University. Evaluators did audit practice trials to meet inter-rater reliability score standards (>80%). audits were conducted at designated sites …

Starch-Entrapped Microsphere Fibers Improve Bowel Habit But Do Not Exhibit Prebiotic Capacity In Those With Unsatisfactory Bowel Habits: A Phase I, Randomized, Double-Blind, Controlled Human Trial, Heather E. Rasmussen, Bruce Hamaker, Kumar B. Rajan, Ece Mutlu, Stefan J. Green, Michael Brown, Amandeep Kaur, Ali Keshavarzian

Department of Nutrition and Health Sciences: Faculty Publications

Approximately one-third of individuals in the United States experience unsatisfactory bowel habits, and dietary intake, especially one low in fiber, could be partly responsible. We hypothesized that intake of a fermentable fiber (starch-entrapped microspheres, SM) that has a delayed, slow fermentation profile in vitro would improve bowel habit while exhibiting prebiotic capacity in those with self-described unsatisfactory bowel habits, all with minimal adverse effects. A total of 43 healthy volunteers completed a 3-month,double-blind, parallel-arm randomized clinical trial to assess the ability of a daily dose (9 or 12 g) of SM vs. psyllium (12 g) to improve bowel habit, including …

Integration Of Mirna And Mrna Expression Profles Reveals Microrna-Regulated Networks During Muscle Wasting In Cardiac Cachexia, Leonardo N. Moraes, Geysson J. Fernandez, Ivan Jose Vechetti Jr, Paula P. Freire, Rodrigo W. A. Souza, Rolando A.R. Villacis, Silvia R. Rogatto, Patricia P. Reis, Maeli Dal-Pai-Silvia, Robson F. Carvalho

Department of Nutrition and Health Sciences: Faculty Publications

Cardiac cachexia (CC) is a common complication of heart failure (HF) associated with muscle wasting and poor patient prognosis. Although different mechanisms have been proposed to explain muscle wasting during CC, its pathogenesis is still not understood. Here, we described an integrative analysis between miRNA and mRNA expression profiles of muscle wasting during CC. Global gene expression profiling identified 1,281 genes and 19 miRNAs differentially expressed in muscle wasting during CC. Several of these deregulated genes are known or putative targets of the altered miRNAs, including miR-29a-3p, miR-29b-3p, miR-210-5p, miR-214, and miR-489. Gene ontology analysis on integrative mRNA/miRNA expression profiling …

Patterns Of Variation In Deciduous Second And Permanent First Molars Among Chimpanzee Taxa, Livia A. Taylor

Department of Anthropology: Theses and Student Research

This project aims to expand our understanding of the utility of molar outline morphology in discriminating between primate taxa as well as to determine whether there is a significant advantage to using deciduous second molars (dm2) over permanent first molars (M1). Recent research in paleontology and paleoanthropology have demonstrated the usefulness of Elliptical Fourier Analysis of molar crown outlines in distinguishing between closely related animal taxa, including hominins, mice, and pigs. I apply this methodology to three Pan taxa: Pan paniscus, Pan troglodytes troglodytes, and Pan troglodytes schweinfurthii to determine how well biological distance information gleaned from molar outline analysis …

Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) Types Of The Museum Of Comparative Zoology (Mcz), With A Brief History Of The Coleoptera Collection, Eugenio H. Nearns, Gareth S. Powell

Insecta Mundi

The primary types of Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) of the Museum of Comparative Zoology (MCZ), Harvard University, are catalogued and illustrated. Data on the original combination, current name, gender, and type locality are verified and presented. There are 19 primary types of Onciderini including seven in Oncideres Lacordaire, 1830; two in Hesychotypa Thomson, 1868; and two in Hypsioma Audinet- Serville, 1835. Of the 19 primary types, 18 were described by L. S. Dillon and E. S. Dillon. A brief history of the Coleoptera collection at the MCZ is also presented.

New Anthophilous Host Associations For Adult Acmaeodera Eschscholtz, 1829 (Coleoptera: Buprestidae) Species From The Western United States And Texas, Richard L. Westcott, Delbert A. La Rue

Insecta Mundi

New anthophilous host associations are presented for adults of 42 species and two subspecies in the buprestid genus Acmaeodera Eschscholtz, 1829 (Coleoptera: Buprestidae), mostly from Arizona and Nevada. Acmaeodera reflexa Barr is reported for the fi rst time from Arizona.

Una Nueva Especie Del Género Eugnosta Hübner, De Chile (Lepidoptera: Tortricidae), Danilo E. Cepeda

Insecta Mundi

Una nueva especie del género Eugnosta Hübner, E. lankinae n.sp. (Lepidoptera: Tortricidae), es descrita para la Provincia de Elqui, Chile. Se entregan los caracteres morfológicos del adulto y las fi guras de la genitalia masculina. Además se discute su posición sistemática con dos especies congéneres Neotropicales.

A new species of the genus Eugnosta Hübner, E. lankinae n.sp. (Lepidoptera: Tortricidae), is described from the Elqui Province in Chile. Male adult morphology, including genitalia, are fi gured. The systematic position in relation to two closely related Neotropical species is discussed.

A New Species Of Dipropus Germar (Coleoptera: Elateridae) From Florida, With Taxonomic And Morphological Notes And A New Key To The Species Of The Eastern United States, Blaine Mathison, Paul J. Johnson

Insecta Mundi

Dipropus tequesta Johnson new species (Coleoptera: Elateridae) is described from southern Florida. Dipropus fuscus (LeConte) is a new synonym of D. soleatus (Say), and D. granosus (Fall) is a new synonym of D. asper (LeConte). The flightless female of D. asper is described and provides the first report of brachyptery and endogean habits in Dipropus. A key to the species of the eastern United States and a new checklist of species for the country are provided.

Molecular And Culture-Based Assessment Of Root/Crown Rot Fungal/Oomycete Complex Of Bean In Mozambique, Suzana Vanessa Ismael Fernandes

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Dry edible beans (Phaseolus vulgaris) play an important role in food security, alleviating hunger and malnutrition and adding value to the economy in Mozambique. Recently, root/crown rot (RCR) has caused yield losses in bean fields in Mozambique. A diverse taxa of fungi and oomycetes have been associated with RCR. However, in Mozambique little information on root rot is available. The purpose of this study is to use Illumina sequencing platform, polymerase chain reaction (PCR) and culture-based methods to identify the primary pathogens associated with RCR in Mozambique. A total of 88 plants showing symptoms of RCR disease were …

Multi-Character Field Recognition For Arabic And Chinese Handwriting, Daniel Lopresti, George Nagy, Sharad C. Seth, Xiaoli Zhang

School of Computing: Conference and Workshop Papers

Two methods, Symbolic Indirect Correlation (SIC) and Style Constrained Classification (SCC), are proposed for recognizing handwritten Arabic and Chinese words and phrases. SIC reassembles variable-length segments of an unknown query that match similar segments of labeled reference words. Recognition is based on the correspondence between the order of the feature vectors and of the lexical transcript in both the query and the references. SIC implicitly incorporates language context in the form of letter n-grams. SCC is based on the notion that the style (distortion or noise) of a character is a good predictor of the distortions arising in other characters, …

Textile Terminologies From The Orient To The Mediterranean And Europe, 1000 Bc To 1000 Ad, Salvatore Gaspa, Cécile Michel, Marie-Louise Nosch

Zea E-Books Collection

The papers in this volume derive from the conference on textile terminology held in June 2014 at the University of Copenhagen. Around 50 experts from the fields of Ancient History, Indo-European Studies, Semitic Philology, Assyriology, Classical Archaeology, and Terminology from twelve different countries came together at the Centre for Textile Research, to discuss textile terminology, semantic fields of clothing and technology, loan words, and developments of textile terms in Antiquity. They exchanged ideas, research results, and presented various views and methods.

This volume contains 35 chapters, divided into five sections: • Textile terminologies across the ancient Near East and the …

Development Of Entrapment Columns For The Study Of Affinity Based Analysis Of Drug–Protein Interactions, Shiden T. Azaria

Department of Chemistry: Dissertations, Theses, and Student Research

High-performance affinity chromatography (HPAC) is a type of liquid chromatography in which solutes are separated based on their binding to a stationary phase that is a biologically-related agent. Because of the strong and selective nature of many biological interactions, this method has already become a powerful technique for the purification and analysis of solutes that are complementary to the immobilized binding agent. Human serum albumin (HSA), the most abundant protein in the blood with concentrations of 35-50 mg/mL in serum, has interactions with many drugs, which can affect the absorption, distribution, metabolism and excretion of such agents.

The overall goal …

Checklist Of Helminths Of Bats From Mexico And Central America, F. Agustín Jiménez, Juan M. Caspeta-Mandujano, Said B. Ramírez-Chávez, Silvia E. Ramírez-Díaz, Marissa G. Juárez-Urbina, Jorge L. Peralta-Rodríguez, José A. Guerrero

MANTER: Journal of Parasite Biodiversity

Based on original data obtained from fieldwork conducted from January 2008 to December 2015 and from previous records from published accounts, an updated checklist of helminth parasites of bats from Mexico and Central America is presented. The checklist has been organized in four ways, first as a helminth-host list in the state of Morelos, second as a helminth-host list with taxonomic and geographic distributional information, third as a bat-helminth list with references, and last, as a summary of the host-helminth association. A total of 105 records and 67 helminth taxa (26 trematodes, 4 cestodes, and 37 nematodes [33 adult and …

Review: New Frontiers In Metabolomics: From Measurement To Insight, Eli Riekeberg, Robert Powers

Robert Powers Publications

Metabolomics is the newest addition to the “omics” disciplines and has shown rapid growth in its application to human health research because of fundamental advancements in measurement and analysis techniques. Metabolomics has unique and proven advantages in systems biology and biomarker discovery. The next generation of analysis techniques promises even richer and more complete analysis capabilities that will enable earlier clinical diagnosis, drug refinement, and personalized medicine. A review of current advancements in methodologies and statistical analysis that are enhancing and improving the performance of metabolomics is presented along with highlights of some recent successful applications.