Digital Commons Network^™

Distortion Of The Local Magnetic Field Appears To Neither Disrupt Nocturnal Navigation Nor Cue Shelter Recognition In The Amblypygid Paraphrynus Laevifrons, Daniel D. Wiegmann, Patrick Casto, Eileen Hebets, Verner P. Bingman

Eileen Hebets Publications

Many arthropods are known to be sensitive to the geomagnetic field and exploit the field to solve spatial problems. The polarity of the geomagnetic field is used, for instance, as an orientation cue by leafcutter ants as they travel on engineered trails in a rainforest and by Drosophila larvae as they move short distances in search of food. A ubiquitous orientation cue like the geomagnetic field may be especially useful in complex, cluttered environments like rainforests, where the reliability of celestial cues used to navigate in more open environments may be poor. The neotropical amblypygid Paraphrynus laevifrons is a nocturnal …

Capturing Spatial Variability In Maize And Soybean Using Stationary Sensor Nodes, Jasreman Singh, Derek M. Heeren, Yufeng Ge, Geng Bai

Department of Agricultural and Biological Systems Engineering: Faculty Publications

• Irrigation in agriculture maximizes crop yield and improves food security globally • Irrigation scheduling is strongly based on the ability to accurately estimate the appropriate amount and timing of water application • The timing of the irrigation can best be informed through the crop canopy stress, and the amount of irrigation is informed through soil moisture depletion

• Developing upper (non-water stressed) and lower (non-transpiring) baselines for irrigated and non-irrigated maize and soybean • Investigating the relationship between the canopy stress and the soil moisture stress

The canopy temperature stress and soil moisture depletion had stronger correlation for non-irrigated …

The Role Of Nestling Acoustic Experience In Song Discrimination In A Sparrow, Emily J. Hudson, Nicole Creanza, Daizaburo Shizuka

School of Biological Sciences: Faculty Publications

Oscine songbirds are an ideal system for investigating how early experience affects vocal behavior. Young songbirds face a challenging task: how to recognize and selectively learn only their own species’ song, often during a time-limited window. Because birds are capable of hearing birdsong very early in life, early exposure to song could plausibly affect recognition of appropriate models; however, this idea conflicts with the traditional view that song learning occurs only after a bird leaves the nest. Thus, it remains unknown whether natural variation in acoustic exposure prior to song learning affects the template for recognition. In a population where …

Collective Effect Of Landfills And Landscape Composition On Bird–Aircraft Collisions, Morgan Pfeiffer, Bradley F. Blackwell, Travis L. Devault

United States Department of Agriculture Wildlife Services: Staff Publications

Ninety-three percent of all reported bird strikes occur below 1,067 m, which based on the typical approach and departure angles of aircraft is within 8–13 km of an airport. Concomitantly, the Federal Aviation Administration and the International Civil Aviation Organization recommend that any feature that would attract hazardous wildlife to the approach and departure airspace be restricted. Thus, preventing the establishment of wildlife attractants, such as municipal solid waste landfills (MSWLFs) within 8 km or 13 km extents (U.S. and international recommendations, respectively) of airports, has been recommended to mitigate the risk of bird–aircraft collisions (strikes). However, robust evidence linking …

Prey Selection By Birds Of Prey, Anisha Pokharel

School of Biological Sciences: Dissertations, Theses, and Student Research

Prey selection is key to determine predator prey interaction and understanding the complexity of food web structure. In this thesis, we used two different approaches to understanding prey selection by North American birds of prey. Using a conventional method, in Chapter 1 we compared pellet analysis and trapping data to assess patterns of prey selection of barn owls in western Nebraska. Microtus spp. comprised 55.8% of the prey items in the barn owl’s diet. The proportion of several prey types in the diet were significantly different from the expected proportion based on trapping. This pattern may indicate barn owls actively …

The Relationship Between The Cervical Microbiome And Cervical Cancer Risk In Sub-Saharan Africa, Cameron G. Klein

School of Biological Sciences: Dissertations, Theses, and Student Research

Despite ongoing efforts, sub-Saharan Africa faces a higher cervical cancer burden than anywhere else in the world. Besides HPV infection, definitive factors of cervical cancer are still unclear. Dysbiosis of the cervicovaginal microbiota, particularly involving sexually transmitted infections, is associated with increased cervical cancer risk. Notably, HIV infection, which is prevalent in sub-Saharan Africa, greatly increases risk of cervicovaginal dysbiosis and cervical cancer. To better understand and address cervical cancer in sub-Saharan Africa, a better understanding of the regional cervicovaginal microbiome is required. In this study, I establish the relationship between cervical cancer, HPV, HIV, cervicovaginal infections, and the cervicovaginal …

Functions Of Vocal Mimicry In The Complex Song Of The European Starling, Sturnus Vulgaris, Maria Goller

School of Biological Sciences: Dissertations, Theses, and Student Research

Vocal learning is an ability that has only evolved in a handful of taxa. Songbirds learn their songs, and some species have flexible learning in which they not only incorporate species-specific sounds, but heterospecific and/or environmental sounds as well. The functions of vocal mimicry are still unknown for many species and studying mimicry can teach us about the variation within the song learning process. In this thesis, I focused on five hypotheses on how mimicry could function in sexual selection. The repertoire size hypothesis suggests that selection for larger repertoire sizes allows mimicry to occur because imitation can increase repertoire …

Dgts Production As A Phosphate Starvation Response In The Human Fungal Pathogen Candida Albicans, Caleb J. Wehling

School of Biological Sciences: Dissertations, Theses, and Student Research

Betaine lipids are a class of membrane lipids with betaine head groups. Three betaine lipids are known: diacylglyceryltrimethylhomoserine (DGTS), diacylglycerylhydroxymethylalanine (DGTA), and diacylglycerylcarboxymethylcholine (DGCC). Betaine lipids are most common in algae, although DGTS, the most common betaine lipid, is also found in many bacteria and fungi. Organisms which produce betaine lipids (especially DGTS) often don’t produce phosphatidylcholine (PtdCho), and DGTS structure resembles PtdCho structure without any phosphorous, leading to the hypothesis that betaine lipids may substitute for phospholipids in some organisms. This has been confirmed by discoveries that some organisms are capable of switching their membrane composition from PtdCho to …

Comparison Of Comprehensive Health Score In North American Housed Giraffe And Free-Ranging Giraffe From South Africa, Haley Beer

Department of Animal Science: Dissertations, Theses, and Student Research

Stress is evident in many animal species and has been correlated to disease prevalence. During stressful events, allostasis is initiated by physiologic systems to maintain or reestablish homeostasis to protect an organism’s viability. Over time, the acclimation to frequent stress causes systematic dysregulation, leading to the phenomena of increased allostatic load. Allostatic load has been assessed in animal species via serum through selection of representative, multi-system biomarker indices. Perception and number of stress events may impact dysregulation severity, yielding allostatic load as a predictive tool. However, the allostatic load methodology poses application limitations to individuals without historical data and those …

Evaluation Of Protein Sources And Holstein Finishing Systems For Organic Beef Production And A Comparison Of Single And Dual Implant Strategies In Finishing Heifers, Elizabeth A. Schumacher

Department of Animal Science: Dissertations, Theses, and Student Research

Two in situ experiments were conducted to compare the rumen undegradable protein content (RUP) and RUP digestibility of conventional and organic field peas, fish meal, dehydrated alfalfa, and soybean meal. Significant differences were detected between feed samples in both studies for all variables measured. Variation existed between sample types but the data did not suggest that organic and conventional feeds are different when processed with the same methods. A performance experiment was conducted utilizing individually fed Holstein steers comparing the effect of RUP source in a simulated organic production system. Dietary treatments were: no supplemental protein (NONE), field peas (FP), …

How Relevant Is The Hippocratic Oath In Guiding Physicians' Views On Physician-Assisted Suicide, Megan Neal

Honors Program: Senior Projects (Public)

The Hippocratic Oath is an ancient vow that most doctors, especially within the last century in the United States, take upon their graduation from medical school. The importance of this oath, however, is up for debate as medical advances and cultural beliefs in the rights of the patient evolve. The Hippocratic Oath has been adapted many times over the past few centuries to reflect the beliefs of the period, but the original Oath still survives. One of the most recent movements in the medicine has been the legalization of physician-assisted suicide (PAS) in select states. Using a qualitative, thematic approach, …

Occurrence And Persistence Of Antibiotics Administered To Cattle In A Newly Established Feedlot, Brittany Trejo

Department of Environmental Engineering: Theses and Other Student Research

The common practice of using therapeutic antibiotics in livestock farming is a worldwide phenomenon. Over the last decade, there has been a growing concern of antibiotics entering the environment via animal manure. Similar studies have focused on the occurrence and biological effects of antibiotics in land-applied animal feedlots; however, limited research has been conducted on the occurrence and persistence of antibiotics in animal feedlots. A study was conducted to investigate the occurrence and persistence of four injected antibiotics (ceftiofur enrofloxacin, florfenicol, and tulathromycin) and two continuously fed antibiotics (monensin and tylosin) in feedlot sediment, runoff, and sediment runoff. For antibiotics …

On The Inadequacy Of Species Distribution Models For Modelling The Spread Of Sars-Cov-2: Response To Araújo And Naimi, Joseph D. Chipperfield, Blas M. Benito, Robert B. O'Hara, Richard J. Telford, Colin J. Carlson

United States Public Health Resources

The ongoing pandemic of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is causing significant damage to public health and economic livelihoods, and is putting significant strains on healthcare services globally. This unfolding emergency has prompted the preparation and dissemination of the article “Spread of SARS-CoV-2 Coronavirus likely to be constrained by climate” by Araújo and Naimi (2020). The authors present the results of an ensemble forecast made from a suite of species distribution models (SDMs), where they attempt to predict the suitability of the climate for the spread of SARS-CoV-2 over the coming months. They argue that climate is …

Catalogue Of Species-Group Names Assigned To Copris Geoffroy, Coptodactyla Burmeister, Litocopris Waterhouse, Microcopris Balthasar, Paracopris Balthasar, Pseudocopris Ferreira, Pseudopedaria Felsche, Sinocopris Ochi, Kon And Bai, And Thyregis Blackburn (Coleoptera: Scarabaeidae: Scarabaeinae: Coprini), Jiri Zidek

Insecta Mundi

Presented are species-group names published in the nine coprine genera (Coleoptera: Scarabaeidae: Scarabaeinae: Coprini) having only one lateral carina on each elytron. The data include authorships, dates and pages of original descriptions, geographic distributions, and references to works pertinent to the topic.

The following catalogue is a compilation intended to serve for orientation in the vast number of species names, their original generic / subgeneric assignments and pertinent references. A word of caution is in order concerning the dates of Ferreira’s papers in the Instituto de Investigação Científica de Moçambique periodicals, especially the Revista de Entomologia de Moçambique, which were …

Host Plant List Of The Scale Insects (Hemiptera: Coccomorpha) In South Korea, Soo-Jung Suh

Insecta Mundi

The scale insects (Hemiptera: Coccomorpha) are one of the most successful groups of plant-feeding arthropods. Most species of shade trees, fruit trees and ornamental shrubs are subject to scale insect attacks. Based on the review of the literature and survey results, the host plant list of the scale insects in South Korea was developed and updated. Herein, an updated list of 253 species of host plants in 71 families associated with scale insects is provided and 162 species in 15 scale insect families are listed.

On The Distribution Of Phlegyas Stål (Hemiptera: Heteroptera: Pachygronthidae), John M. Leavengood, Jr.

Insecta Mundi

Updated distributions are provided for all three species of Phlegyas Stål (Hemiptera: Heteroptera: Pachygronthidae) in the New World: Phlegyas abbreviatus (Uhler, 1876), P. annulicrus Stål, 1869, and P. patruelis Berg, 1883. In total, four new state records for the United States of America, four new state records for Mexico, one new Canadian provincial record, and one new country record (Nicaragua, P. annulicrus) are presented, along with remarks and corrections.

Weather And Exposure Period Affect Coyote Detection At Camera Traps, Anastasia E. Madsen, Lucia Corral Hurtado, Joseph J. Fontaine

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Abstract Camera traps are an increasingly popular means to monitor wildlife populations. However, like other techniques for measuring populations, camera traps are subject to sources of error that may bias population estimates. Past studies accounting for detection error have failed to account for a simple but potentially widely pervasive source of environmental error: weather conditions. Using 5,108,416 photographs from 804 scent‐lured camera traps deployed in western Nebraska, USA, during spring and autumn of 2014 and 2015, we analyzed the relationship between weather conditions (barometric pressure, wind speed, precipitation, and temperature) and coyote (Canis latrans) detection probability. Using binomial …

Testing A Key Assumption Of Using Drones As Frightening Devices: Do Birds Perceive Drones As Risky?, Conor C. Egan, Bradley Blackwell, Esteban Fernández-Juricic, Page E. Klug

United States Department of Agriculture Wildlife Services: Staff Publications

Wildlife managers have recently suggested the use of unmanned aircraft systems or drones as nonlethal hazing tools to deter birds from areas of human-wildlife conflict. However, it remains unclear if birds perceive common drone platforms as threatening. Based on field studies assessing behavioral and physiological responses, it is generally assumed that birds perceive less risk from drones than from predators. However, studies controlling for multiple confounding effects have not been conducted. Our goal was to establish the degree to which the perception of risk by birds would vary between common drone platforms relative to a predator model when flown at …

A Polarimetric Radar Analysis Of Cold- And Warm-Based Supercells, Timothy J. Gunkel

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

Polarimetric analyses of supercell thunderstorms have been increasingly common within the past decade, since operational polarimetric radar data became available in 2013. Although polarimetric signatures within supercell thunderstorms are well known, few have investigated variability in these signatures in differing environments. Polarimetric signatures can provide vital information regarding the microphysical characteristics and processes in supercell thunderstorms. Specific polarimetric signatures of interest are the differential reflectivity (Z_DR) column, the low-level polarimetrically inferred hail core, and the Z_DR arc. These signatures provide information regarding updraft characteristics, hailfall characteristics, and size sorting processes in the storm- relative inflow. Previous studies …

A Wirelessly Controlled Smart Bandage With 3d-Printed Miniaturized Needle Arrays, Hossein Derakhshandeh, Fariba Aghabaglou, Alec Mccarthy, Azadeh Mostafavi, Chris Wiseman, Zack Bonick, Ian Ghanavati, Seth Harris, Craig Kreikemeier-Bower, Seyed Masoud Moosavi Basri, Jordan Rosenbohm, Ruiguo Yang, Pooria Mostafalu, Dennis Orgill, Ali Tamayol

Department of Mechanical and Materials Engineering: Faculty Publications

PUBLIC ACCESS

Hiding In Plain Sight: Discovery And Phylogeography Of A Cryptic Species Of Trichinella (Nematoda: Trichinellidae) In Wolverine (Gulo Gulo), Rajnish Sharma, Peter C. Thompson, Eric P. Hoberg, W. Brad Scandrett, Kelly Konecsni, N. Jane Harms, Piia M. Kukka, Thomas S. Jung, Brett Elkin, Robert Mulders, Nicholas C. Larter, Marsha Branigan, Jodie Pongracz, Brent Wagner, Pratap Kafle, Vladislav A. Lobanov, Benjamin M. Rosenthal, Emily J. Jenkins

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Understanding parasite diversity and distribution is essential in managing the potential impact of para- sitic diseases in animals and people. Imperfect diagnostic methods, however, may conceal cryptic species. Here, we report the discovery and phylogeography of a previously unrecognized species of Trichinella in wolverine (Gulo gulo) from northwestern Canada that was indistinguishable from T. nativa using the stan- dard multiplex PCR assay based on the expansion segment 5 (ESV) of ribosomal DNA. The novel genotype, designated as T13, was discovered when sequencing the mitochondrial genome. Phylogenetic analyses of the mitochondrial genome and of 15 concatenated single-copy orthologs of nuclear DNA …

Gaharitrema Droneni N. Gen., N. Sp. (Digenea: Zoogonidae: Lepidophyllinae) From The Pudgy Cuskeel, Spectrunculus Grandis (Ophidiiformes: Ophidiidae), From Deep Waters Off Oregon, With Updates Keys To Zoogonid Subfamilies And Genera, Charles K. Blend, Gábor R. Rácz, Scott Gardner

Scott L. Gardner Publications

Gaharitrema droneni n. gen., n. sp. (Digenea: Zoogonidae: Lepidophyllinae) is described from the intestine of the pudgy cuskeel, Spectrunculus grandis (Gu¨ nther, 1877) (Ophidiiformes: Ophidiidae), collected at 2,800 m depth from the northeastern Pacific Ocean off Oregon. The new genus is distinguished from Brachyenteron Manter, 1934 and Steganoderma Stafford, 1904, the 2 closest lepidophylline genera, and from 4 other zoogonid genera erected since 2007, the last major revision of the family, by a combination of diagnostic features including a pyriform or spindle-shaped body, smooth testes and ovary, narrow ceca that reach with the vitellarium into the hindbody, an unspecialized ventral …

Sex And Suicide: The Curious Case Of Toll-Like Receptors, Paulo A. Navarro-Costa, Antoine Molaro, Chandra S. Misra, Colin D. Meiklejohn, Peter J. Ellis

School of Biological Sciences: Faculty Publications

During in vitro fertilisation (IVF), pharmacological activation of the murine X chromosome–encoded receptor proteins Toll-like receptor (TLR) 7 and TLR8 reportedly results in male- biased litters by selectively disrupting the motility of X-bearing sperm cells. Thus—in the context of agonist treatment during IVF—these receptors act as ‘suicidal’ segregation distorters that impair their own transmission to the next generation. Such behaviour would, from an evolutionary perspective, be strongly selected against if present during natural fertilisation. Consequently, TLR7/8 biology in vivo must differ significantly from this in vitro situation to allow these genes to persist in the genome. Here, we use our …

The North American Swans: Their Biology And Conservation, Paul Johnsgard

Zea E-Books Collection

Among birds, swans are relatively long-lived species and are also among the most strongly monogamous, having prolonged pair and family bonds that strongly influence their reproductive and general social behavior, which, in combination with their beauty and elegance, contribute to the overall high degree of worldwide human interest in them. This volume of more than 59,000 words describes the distributions, ecology, social behavior, and breeding biologies of the four species of swans that breed or have historically bred in North America, including the native trumpeter and tundra swans, the introduced mute swan, and the marginally occurring whooper swan. Also included …

Caloric Restriction Induces Anabolic Resistance To Resistance Exercise, Chaise Murphy, Karsten Koehler

Department of Nutrition and Health Sciences: Faculty Publications

Purpose Weight loss can result in the loss of muscle mass and bone mineral density. Resistance exercise is commonly prescribed to attenuate these effects. However, the anabolic endocrine response to resistance exercise during caloric restriction has not been characterized. Methods Participants underwent 3-day conditions of caloric restriction (15 kcal kg FFM⁻¹) with post-exercise carbohydrate (CRC) and with post-exercise protein (CRP), and an energy balance control (40 kcal kg FFM⁻¹) with post-exercise carbohydrate (CON). Serial blood draws were taken following five sets of five repetitions of the barbell back squat exercise on day 3 of each condition. …

Diabetes Debunked: What You Need To Know, Maggie Hutson

Honors Program: Senior Projects (Public)

The goal of this Honors creative project is to encourage health literacy in populations who are curious about Type 2 Diabetes or have Type 2 Diabetes. From personal experience, I have seen noncompliance in diabetics and wondered why since it is a serious, progressive disease. After researching, I found that some diabetics do not understand the scope of their disease, especially since many of the dangerous complications that arise from Type 2 Diabetes do not present until later in the disease when it is too late. For my senior project, I decided to write an educational paper as a supplement …

The Effects Of Phosphate On The Metamorphosis Of Larval Western Barred Tiger Salamanders (Ambystoma Mavortium), Lexy Polivanov

Honors Program: Senior Projects (Public)

This investigation will collect data to assist in determining if elevated aquatic phosphate levels affects the metamorphosis rate of larval western barred tiger salamanders (Ambystoma mavortium). Monoammonium phosphate fertilizers are being used on crops in Nebraska (NDA, 2017). This area lines up with the area the western barred tiger salamanders are disappearing from (Damme, 2018). Monoammonium phosphate is made up of nitrogen and phosphate. There have been several studies showing how nitrogen is harmful to amphibians such as this salamander (Griffis-Kyle, 2007) (Griffis-Kyle & Richtie, 2007), but there have not been many showing how phosphate affects amphibian’s metamorphosis …

A Design Framework For Rural Community Prosperity, Austin Arens

Honors Program: Senior Projects (Public)

In rural America, particularly the rural Midwest, the salad days of the distant past seem to be turning from realities into memories. Shrinking populations, ailing infrastructure, and a general decline in quality of life over the past 50 years have left many small communities thinking critically about their future. These social and economic pressures have acted as a call to arms for a few rural communities across the Midwest, especially in the state of Nebraska. The community of Valentine, Nebraska, situated at the crossroads of two highways that span the continent, a regional hub for every household within a 2 …

Neutrophil Infiltration Into The Cervical Compartment Is Suppressed By Hiv Infection, Madeline Maschka

Honors Program: Senior Projects (Public)

Human Papillomavirus (HPV), is a small circular dsDNA virus with at least 200 different genotypes; each genotype is identified by at least 10% difference at the DNA level in the L1 capsid gene. Each HPV genotype affects the body in different tissues, either mucosal or cutaneous. Mucosal HPVs type 16 and 18 are known as high-risk strains, since HPV infection is the most common cause of cervical cancer and plays a central role in formation of precancerous lesions. Human immunodeficiency virus (HIV) damages the body’s immune system by targeting CD4+ T cells. Once CD4+ T cells are infected, the body …

Membrane Lipid Extraction Methods From Sorghum Bicolor, Max Regester

Honors Program: Senior Projects (Public)

Plants are the basis of the world as we know it. As sessile beings, there are often subject to many environment stressors like drought, extreme temperatures, etc. One way of analyzing how plants respond to these stressors is by monitoring changes in their lipid compositions. Having a better understanding of how plants respond to different stressors can have very important implications when it comes to cultivating crops. When testing lipid composition, it is important to measure levels as they were in the living tissue. The problem is, enzymes known as lipases are active during extraction and can greatly change the …