Digital Commons Network^™

Co-Use Among Confidants: An Examination Of Polysubstance Use And Personal Relationships In Southeastern Nebraska, G. Robin Gauthier, Kelly Markowski, Jeffrey A. Smith, Sela R. Harcey, Bergen Johnston

Department of Sociology: Faculty Publications

This study examines the relationship between personal networks and polysubstance use among people who use drugs (PWUD) in a medium sized city in the Midwest. A large body of work has demonstrated that personal relationships have an ambivalent association with substance use. On the one hand, a supportive network is associated with safer drug use practices and dramatically improves the outlook for recovery. However, individuals whose personal networks are composed of co-drug use partners are more likely to engage in risky practices. We argue that this notion of “supportive” social contacts and “risky” social contacts is ultimately incomplete: risky behaviors …

Why Neighborhoods (And How We Study Them) Matter For Adolescent Development, T.D. Warner, R.A. Settersten

Department of Sociology: Faculty Publications

Adolescence is a sensitive developmental period marked by significant changes that unfold across multiple contexts. As a central context of development, neighborhoods capture—in both physical and social space—the stratification of life chances and differential distribution of resources and risks. For some youth, neighborhoods are springboards to opportunities; for others, they are snares that constrain progress and limit the ability to avoid risks. Despite abundant research on “neighborhood effects,” scant attention has been paid to how neighborhoods are a product of social stratification forces that operate simultaneously to affect human development. Neighborhoods in the United States are the manifestation of three …

Is Perceived Inability To Procreate Associated With Life Satisfaction? Evidence From A German Panel Study, Julia Mcquillan, Jasmin Passet-Wittig, Arthur L. Greil, Martin Bujard

Department of Sociology: Faculty Publications

Most studies of the psychosocial consequences of infertility have focused on those who seek medical treatment, leaving a research gap regarding the psychosocial consequences of perceived inability to procreate in the general population. Moreover, most studies are cross-sectional and the results are thus likely affected by omitted variable bias. Inspired by aspects of the Theory of Conjunctural Action, this study analysed 10 waves of data from the German Family Panel (pairfam) for women and men using fixed effects panel regression and including time-varying control variables suggested by theory and research. This study found that both women and men experienced lower …

Family Violence, Personality Traits, And Risk Behaviors: Links To Dating Violence Victimization And Perpetration Among College Students, Kimberly A. Tyler, Douglas A. Brownridge

Department of Sociology: Faculty Publications

Though dating violence (DV) is prevalent on college campuses, few studies have examined a multitude of risk factors that may better explain this process. As such, we examined the role of family violence (i.e., childhood physical abuse, witnessing parental violence), personality traits (i.e., entitlement, antisocial personality [ASP] and borderline personality [BP]) and risk behaviors (i.e., risky sexual behaviors, heavy drinking, marijuana use, illicit drug use) on DV victimization and perpetration among 783 college students. Path analysis revealed that witnessing parental violence was linked to DV perpetration while experiencing more physical abuse was positively correlated with entitlement (females only), ASP traits, …

Comparing Readability Measures And Computer-Assisted Question Evaluation Tools For Self-Administered Survey Questions, Rachel Stenger, Kristen Olson, Jolene Smyth

Department of Sociology: Faculty Publications

Questionnaire designers use readability measures to ensure that questions can be understood by the target population. The most common measure is the Flesch-Kincaid Grade level, but other formulas exist. This article compares six different readability measures across 150 questions in a self-administered questionnaire, finding notable variation in calculated readability across measures. Some question formats, including those that are part of a battery, require important decisions that have large effects on the estimated readability of survey items. Other question evaluation tools, such as the Question Understanding Aid (QUAID) and the Survey Quality Predictor (SQP), may identify similar problems in questions, making …

The Third International Hackathon For Applying Insights Into Large-Scale Genomic Composition To Use Cases In A Wide Range Of Organisms, Kimberly Walker, Divya Kalra, Rebecca Lowdon, Guangyi Chen, Fritz J. Sedlazeck, Ben Busby, Chia-Sin Liew, Et Al.

Nebraska Center for Biotechnology: Faculty and Staff Publications

In October 2021, 59 scientists from 14 countries and 13 U.S. states collaborated virtually in the Third Annual Baylor College of Medicine & DNANexus Structural Variation hackathon. The goal of the hackathon was to advance research on structural variants (SVs) by prototyping and iterating on open-source software. This led to nine hackathon projects focused on diverse genomics research interests, including various SV discovery and genotyping methods, SV sequence reconstruction, and clinically relevant structural variation, including SARS-CoV-2 variants. Repositories for the projects that participated in the hackathon are available at https://github.com/collaborativebioinformatics.

Improving Taxonomic Delimitation Of Fungal Species In The Age Of Genomics And Phenomics, Ashley Stengel, Kimberly M. Stanke, Amanda C. Quattrone, Joshua R. Herr

Department of Plant Pathology: Faculty Publications

Species concepts have long provided a source of debate among biologists. These lively debates have been important for reaching consensus on how to communicate across scientific disciplines and for advancing innovative strategies to study evolution, population biology, ecology, natural history, and disease epidemiology. Species concepts are also important for evaluating variability and diversity among communities, understanding biogeographical distributions, and identifying causal agents of disease across animal and plant hosts. While there have been many attempts to address the concept of species in the fungi, there are several concepts that have made taxonomic delimitation especially challenging. In this review we discuss …

The Perspectives Of Augmentative And Alternative Communication Experts On The Clinical Integration Of Non-Invasive Brain-Computer Interfaces, Kevin Pitt, Miechelle L. Mckelvey, Kristy Weissling

Department of Special Education and Communication Disorders: Faculty Publications

As brain-computer interface for augmentative and alternative communication access (BCI-AAC) development continues to consider avenues for translation into the clinical setting, the perspectives of clinician experts in AAC should be considered. Therefore, 11 USA-based speech-language pathologists who are experts in AAC completed a semistructured interview along with Likert scale measures to assess their perspectives on BCI-AAC. The interviews and scales explored the potential impact of BCI-AAC, along with barriers and solutions to BCI-AAC implementation. Speech-language pathologists estimated that 1.5% to 50% of their caseload may benefit from BCI-AAC across various settings. Further, identified barriers and solutions included (a) BCI-AAC implementation …

Ankrd24 Organizes Triobp To Reinforce Stereocilia Insertion Points, Jocelyn F. Krey, Chang Liu, Inna A. Belyantseva, Michael Bateschell, Rachel A. Dumont, Jennifer Goldsmith, Paroma Chatterjee, Rachel S. Morrill, Lev M. Fedorov, Sarah Foster, Jinkyung Kim, Alfred L. Nuttal, Sherri M. Jones, Dongseok Choi, Thomas B. Friedman, Anthony J. Ricci, Bo Zhao, Peter G. Barr-Gillespie

Department of Special Education and Communication Disorders: Faculty Publications

The stereocilia rootlet is a key structure in vertebrate hair cells, anchoring stereocilia firmly into the cell’s cuticular plate and protecting them from overstimulation. Using superresolution microscopy, we show that the ankyrin-repeat protein ANKRD24 concentrates at the stereocilia insertion point, forming a ring at the junction between the lower and upper rootlets. Annular ANKRD24 continues into the lower rootlet, where it surrounds and binds TRIOBP-5, which itself bundles rootlet F-actin. TRIOBP-5 is mislocalized in Ankrd24^KO/KO hair cells, and ANKRD24 no longer localizes with rootlets in mice lacking TRIOBP-5; exogenous DsRed–TRIOBP-5 restores endogenous ANKRD24 to rootlets in these mice. Ankrd24 …

The Impact Of Covid-19 On Perceived Barriers And Facilitators To The Healthfulness Of Communities With Low-Income, Elder Varela, Jamie Zeldman, Alison Kuch, Yanli Wang, Mohammad Shushari, Elizabeth L. Hall, Jade Mcnamara, Jesse Stabile Morrell, Terezie Tolar-Peterson, Onikia Brown, Melissa D. Olfert, Lisa Franzen-Castle, Tandalayo Kidd, Sarah Colby, Geoffrey Greene, Karla P. Shelnutt

Department of Nutrition and Health Sciences: Faculty Publications

Background: The COVID-19 pandemic brought new challenges affecting the wellbeing of individuals in communities with low income. Understanding where people live and how those environments can facilitate or hinder living a healthy lifestyle is essential for developing interventions that target behavior change and health promotion. Objective: This study compares Extension Nutrition Educators’ (NEs) perceptions of the barriers and facilitators impacting the healthfulness of the environment of communities with low income in eleven states before and during the COVID-19 pandemic.

Relationship Between Reproductive Hormones And Migration Distance In A Polygynous Songbird, The Red‑Winged Blackbird (Agelaius Phoeniceus), Michelle A. Eshleman, Page E. Klug, Esther Morales‑Vega, Björn Wissel, Timothy J. Grelves

United States Department of Agriculture Wildlife Services: Staff Publications

Many bird species migrate to southern overwintering locations to avoid harsh conditions at their breeding grounds, but at the cost of an energetically demanding migration that may delay their spring reproductive development. Previous work on the relationship between migration distance and reproductive readiness has primarily focused on early season baseline testosterone in both males and females. However, for females, testosterone alone may not be the appropriate measurement of reproductive development. Estradiol, a metabolite of testosterone that is essential for breeding behaviors and reproduction, should also be measured. Furthermore, baseline testosterone varies throughout the day and may change due to social …

A Systematic Map Of Human-Carnivore Coexistence, Cassandre C. Venumière-Lefebvre, Stewart W. Breck, Kevin R. Crooks

United States Department of Agriculture Wildlife Services: Staff Publications

Carnivore populations globally have largely declined, and coexistence, where humans and carnivores share landscapes, plays a crucial role in carnivore conservation. However, the term “coexistence” is often used in scientific and popular literature without being clearly defined. Herein, we provide a global perspective on what coexistence is and how it is studied. We conducted a systematic map of 366 articles published between 1987 and 2020 to characterize human-carnivore coexistence literature according to coexistence definitions, temporal trends, geographic and taxonomic focus, and four thematic aspects of coexistence: carnivore ecology, human endeavors, social conflict and human-carnivore conflict. We used chi-squared tests and …

Frugivory And Seed Dispersal By Carnivorans, John P. Draper, Julie K. Young, Eugene W. Schupp, Noelle G. Beckman, Trisha B. Atwood

United States Department of Agriculture Wildlife Services: Staff Publications

Seed dispersal is critical to the ecological performance of sexually reproducing plant species and the communities that they form. The Mammalian order Carnivora provide valuable and effective seed dispersal services but tend to be overlooked in much of the seed dispersal literature. Here we review the literature on the role of Carnivorans in seed dispersal, with a literature search in the Scopus reference database. Overall, we found that Carnivorans are prolific seed dispersers. Carnivorans’ diverse and plastic diets allow them to consume large volumes of over a hundred families of fruit and disperse large quantities of seeds across landscapes. Gut …

Aboveground Carbon Responses To Experimental And Natural Hurricane Impacts In A Subtropical Wet Forest In Puerto Rico, Hervé Chevalier, Nicholas V.L. Brokaw, Sheila E. Ward, Jess K. Zimmerman, Aaron B. Shiels, John Bithorn, Samuel Matta Carmona

United States Department of Agriculture Wildlife Services: Staff Publications

Climate change and disturbance make it difficult to project long-term patterns of carbon sequestration in tropical forests, but large ecosystem experiments in these forests can inform predictions. The Canopy Trimming Experiment (CTE) manipulates two key components of hurricane disturbance, canopy openness and detritus deposition, in a tropical forest in Puerto Rico. We documented how the CTE and a real hurricane affected tree recruitment, biomass, and aboveground carbon storage over 15 years. In the CTE treatments, we trimmed branches, but we did not fell trees. We expected that during the 14-year period after initial canopy trimming, regrowth of branches and stems …

Behavioral States In Space And Time: Understanding Landscape Use By An Invasive Mammal, Steven M. Gray, John M. Humphreys, Robert A. Montgomery, Dwayne R. Etter, Kurt C. Vercauteren, Daniel B. Kramer, Gary J. Roloff

United States Department of Agriculture Wildlife Services: Staff Publications

Animal movement models can be used to understand species behavior and assist with implementation of management activities. We explored behavioral states of an invasive wild pig (Sus scrofa) population that recently colonized central Michigan, USA, 2014–2018. To quantify environmental factors related to wild pig movement ecology and spatio‐temporal landscape use, we predicted wild pig behavioral states relative to land cover type, landscape structure (i.e., edge and patch cohesion), and weather conditions. We used global positioning system (GPS)‐collars and monitored 8 wild pigs from 2014–2018. We fit local convex hulls and calculated movement metrics revealing 3 wild pig behavioral states (resting, …

Concentration-Response Of An Anthraquinone-Based Repellent For Raccoons (Procyon Lotor), Shylo Johnson, Shelagh T. Deliberto, Kathleen Urchek, Amy T. Gilbert, Scott J. Werner

United States Department of Agriculture Wildlife Services: Staff Publications

Wildlife repellents can be part of non-lethal management strategies to reduce the negative impacts of wildlife to property, agricultural production, and human health and safety. Raccoons (Procyon lotor) are associated with negative impacts in all three of these areas. Anthraquinone is a useful avian repellent and its utility as a mammalian repellent is still being explored. Our objective was to evaluate laboratory efficacy of an anthraquinone-based repellent for raccoons using different concentrations. We fed captive raccoons whole corn treated at 0.5%, 1%, 1.5% and 2% anthraquinone and examined their behavioral response related to feeding repellency including consumption and change in …

Accounting For Animal Movement Improves Vaccination Strategies Against Wildlife Disease In Heterogeneous Landscapes, Katherine M. Mcclure, Guillaume Bastille-Rousseau, Amy J. Davis, Carolyn A. Stengel, Kathleen M. Nelson, Richard B. Chipman, George Wittemyer, Zaid Abdo, Amy Gilbert, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

Oral baiting is used to deliver vaccines to wildlife to prevent, control, and eliminate infectious diseases. A central challenge is how to spatially distribute baits to maximize encounters by target animal populations, particularly in urban and suburban areas where wildlife such as raccoons (Procyon lotor) are abundant and baits are delivered along roads. Methods from movement ecology that quantify movement and habitat selection could help to optimize baiting strategies by more effectively targeting wildlife populations across space. We developed a spatially explicit, individual-based model of raccoon movement and oral rabies vaccine seroconversion to examine whether and when baiting …

Using Noninvasive Genetics For Estimating Density And Assessing Diet Of Urban And Rural Coyotes In Florida, Usa, Bryan M. Kluever, Martin B. Main, Stewart W. Breck, Robert C. Lonsinger, John H. Humphrey, Justin W. Fischer, Michael P. Milleson Usda Aphis Wildlife Services, Gainesville, Antionette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Coyotes (Canis latrans) are expanding their range and due to conflicts with the public and concerns of Coyotes affecting natural resources such as game or sensitive species, there is interest and often a demand to monitor Coyote populations. A challenge to monitoring is that traditional invasive methods involving live-capture of individual animals are costly and can be controversial. Natural resource management agencies can benefit from contemporary noninvasive genetic sampling approaches aimed at determining key aspects of Coyote ecology (e.g., population density and food habits). However, the efficacy of such approaches under different environmental conditions is poorly understood. Our …

Invasive Predators Affect Community-Wide Pollinator Visitation, Christina T. Liang, Aaron B. Shiels, William P. Haines, Manette E. Sandor, Clare E. Aslan

United States Department of Agriculture Wildlife Services: Staff Publications

Disruption of plant–pollinator interactions by invasive predators is poorly understood but may pose a critical threat for native ecosystems. In a multiyear field experiment in Hawai’i, we suppressed abundances of globally invasive predators and then observed insect visitation to flowers of six native plant species. Three plant species are federally endangered (Haplostachys haplostachya, Silene lanceolata, Tetramolopium arenarium) and three are common throughout their range (Bidens menziesii, Dubautia linearis, Sida fallax). Insect visitors were primarily generalist pollinators, including taxa that occur worldwide such as solitary bees (e.g., Lasioglossum impavidum), social bees (e.g., …

Spatial Risk Modeling Of Cattle Depredation By Black Vultures In The Midwestern United States, Brandon M. Quinby, Bryan M. Kluever, Grant N. Burcham, Lee Humberg, Landon R. Jones, Marian L. Wahl, Patrick A. Zollner

United States Department of Agriculture Wildlife Services: Staff Publications

ock operations through depredation of stock are a cause of human‐wildlife conflict. Management of such conflict requires identifying environmental and non‐environmental factors specific to a wildlife species' biology and ecology that influence the potential for livestock depredation to occur. Identification of such factors can improve understanding of the conditions placing livestock at risk. Black vultures (Coragyps atratus) have expanded their historical range northward into the midwestern United States. Concomitantly, an increase in concern among agricultural producers regarding potential black vulture attacks on livestock has occurred. We estimated area with greater or lesser potential for depredation of domestic cattle by black …

Capture-Recapture Reveals Heterogeneity In Habitat-Specific Mongoose Densities And Spatiotemporal Variability In Trapping Success In St. Kitts, West Indies, Caroline C. Sauvé, Are R. Berentsen, Amy Gilbert, Anne Conan, Luis Cruz-Martinez, Patrick A. Leighton

United States Department of Agriculture Wildlife Services: Staff Publications

The small Indian mongoose (Urva auropunctata) is a non-native invasive species across the Caribbean and a rabies reservoir on at least four islands in the region. Although previous studies reported mongoose density estimates in their non-native range, the variability in trapping designs, study seasonality, and analytical methods among studies precludes direct comparisons. This study is the first to report mongoose densities for the island of St. Kitts, West Indies. Our objective was to quantify mongoose densities across four habitats characteristic for the island. High capture and recapture rates in this study resulted in detailed estimates of spatial heterogeneity …

Rodents In Agriculture: A Broad Perspective, Gary Witmer

United States Department of Agriculture Wildlife Services: Staff Publications

The largest taxonomic group of mammals is rodents, with over 2200 species known around the world [1]. More recently, it was stated that over 2500 species exist [2]. Many species exist on all continents, with the exception of Antarctica. Rodents have adapted to all ecosystems of the world, including tundra, alpine, temperate forests, grasslands, arid regions, and aquatic systems. They provide many ecosystem functions, including soil aeration and mixing, seed and spore dispersal, vegetation succession, and being an important food source for predatory animals. Some species of rodents are even consumed by people in some parts of the world. Most …

Transmission Of Antibiotic Resistance At The Wildlife-Livestock Interface, Shinyoung Lee, Peixin Fan, Ting Liu, Anni Yang, Raoul K. Boughton, Kim M. Pepin, Ryan S. Miller, Kwangcheol Casey Jeong

United States Department of Agriculture Wildlife Services: Staff Publications

Antibiotic-resistant microorganisms (ARMs) are widespread in natural environments, animals (wildlife and livestock), and humans, which has reduced our capacity to control life threatening infectious disease. Yet, little is known about their transmission pathways, especially at the wildlife-livestock interface. This study investigated the potential transmission of ARMs and antibiotic resistance genes (ARGs) between cattle and wildlife by comparing gut microbiota and ARG profiles of feral swine (Sus scrofa), coyotes (Canis latrans), cattle (Bos taurus), and environmental microbiota. Unexpectedly, wild animals harbored more abundant ARMs and ARGs compared to grazing cattle. Gut microbiota of cattle was …

Dammed Water Quality—Longitudinal Stream Responses Below Beaver Ponds In The Umpqua River Basin, Oregon, John R. Stevenson, Jason B. Dunham, Steven M. Wondzell, Jimmy Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

Beaver-related restoration (BRR) has gained popularity as a means of improving stream ecosystems, but the effects are not fully understood. Studies of dissolved oxygen (DO) and water temperature, key water quality metrics for salmonids, have demonstrated improved conditions in some cases, but warming and decreased DO have been more commonly reported in meta-analyses. These results point to the contingencies that can influence outcomes from BRR. We examined water quality related to beaver ponds in a diverse coastal watershed (Umpqua River Basin, OR, USA). We monitored water temperature 0–400m above and below beaver ponds and at pond surfaces and bottoms across …

Economic Damages Of Wild Pigs In Non-Traditional Areas: From The Fairway To The After Life, Sophie Mckee, Julie Elser, Maryfrances Miller, Lirong Liu, Ryan Miller, Steven S. Shwiff, Stephanie A. Shwiff

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive wild pigs are widely known to cause damage to agricultural properties and commodities, but less has been reported about damages to other types of property. A survey was distributed to golf courses and cemeteries across Texas to explore the extent of damage these properties experience. While both property types reported significant damages, golf courses were found to experience more damage than cemeteries. Using average reported costs and predicted county-level damage, total costs for all golf courses and cemeteries across the state were estimated to exceed $1.6 million USD per year.

Sars-Cov-2 In Wildlife: Q & A With Alan B. Franklin, Alan B. Franklin

United States Department of Agriculture Wildlife Services: Staff Publications

Welcome Dr Franklin and thank you for joining us to help social workers increase their knowledge about the interconnectedness of humans, other mammals, and the environment. Let's begin with zoonosis.

Viruses can be transferred from wild and domestic animals to humans in a process called zoonosis.

Strength In Numbers: Avian Influenza A Virus Transmission To Poultry From A Flocking Passerine, J. Jeffrey Root, Jeremy W. Ellis, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

The effects of flock size of European starlings (Sturnus vulgaris) was experimentally manipulated to assess the potential of influenza A virus (IAV; H4N6) transmission from a flocking passerine to bobwhite quail (Colinus virginianus) through shared food and water resources to mimic starling intrusions into free-range and backyard poultry operations. Of the three starling flock sizes tested (n = 30, n = 20 and n = 10), all successfully transmitted the virus to all or most of the quail in each animal room (6/6, 6/6 and 5/6) by the end of the experimental period, as determined by seroconversion and/or viral RNAshedding. …

Social Learning Of Avoidance Behaviors: Trap Aversion In Captive Coyotes, Julie Young, Jeffrey T. Schultz, Buck Jolley, Nekol Basili, John P. Draper

United States Department of Agriculture Wildlife Services: Staff Publications

Social learning can help animals gain knowledge rapidly and may enhance survival. In species that are subjected to capture in foothold traps and then lethally removed, such as the coyote (Canis latrans), learning to avoid traps is critical to survival. Here, we tested social learning of trap avoidance behavior in three experimental scenarios with captive coyotes. In the first experiment, coyotes observed an unfamiliar coyote get captured in a foothold trap (i.e., demonstrator) or did not observe a demonstrator and were therefore naïve to traps. The coyotes that observed a demonstrator showed similar latencies to approach the trap …

Predicting Consistent Foraging Ecologies Of Migrating Waterbirds: Using Stable Isotope And Parasite Measurements As Indicators Of Landscape Use, Kate L. Sheehan, Brian S. Dorr, Stephen A. Clements, Terrel W. Christie, Katie Hanson-Dorr, Scott A. Rush, J. Brian Davis

United States Department of Agriculture Wildlife Services: Staff Publications

The emergence of novel human pathogens is frequently linked with zoonotic events and human-wildlife interactions that promote disease transmission. Consequently, surveillance of wildlife populations for candidate diseases that could spread to humans is beneficial, but requires widespread collections of numerous samples. A legitimate means to acquire large sample sizes of waterfowl is through cooperation between researchers and hunters, who also work in concert with natural resource managers, landowners, and agricultural entities -e.g., aquaculture facilities. In addition to understanding the occurrence and spread of parasites and pathogens by birds, these samples can be used to answer questions about the ecology of …

Summer Habitat Use And Movements Of Invasive Wild Pigs (Sus Scrofa) In Canadian Agro-Ecosystems, Corey J. Kramer, Melanie R. Boudreau, Ryan S. Miller, Ryan Powers, Kurt C. Vercauteren, Ryan K. Brook

United States Department of Agriculture Wildlife Services: Staff Publications

Resource selection informs understanding of a species’ ecology and is especially pertinent for invasive species. Since introduced to Canada, wild pigs (Sus scrofa Linnaeus, 1978) remain understudied despite recognized negative impacts on native and agricultural systems globally. Elsewhere in North America, pigs typically use forests and forage in agricultural crops. We hypothesized Canadian wild pigs would behave similarly, and using GPS locations from 15 individuals, we examined diel and seasonal resource selection and movement in the Canadian prairie region. Forests were predominately selected during the day, while corn (Zea mays L.), oilseeds, and wheat (Triticum aestivum L.) …