Digital Commons Network^™

Surveillance Of Culex And Aedes Mosquitoes In Lincoln, Lancaster County, Nebraska, William Noundou

Department of Entomology: Dissertations, Theses, and Student Research

In 2018, West Nile virus (WNV) was identified as the leading cause of mosquito-borne disease in the continental United States. In response to this very serious problem, the Lincoln-Lancaster County Public Health Department (LLCHD) reinforced their mosquito surveillance program, which constitutes one of the best available tools to fight against this serious threat to human health. The objectives of this study were to 1) expand knowledge of the activity and relative abundance of mosquito communities in understudied areas and 2) evaluate differences in mosquito communities by urban and rural location, especially focusing on known vector species. A total of 6 …

Nutrient Cycling In Forage Production Systems, David A. Wedin, Michael P. Russelle

School of Natural Resources: Faculty Publications

In most forage production systems, the nutrients needed for plant growth are provided by the microbially-mediated breakdown and release of plant-available mineral nutrients from dead plant tissues, livestock excreta, soil organic matter, and geochemically-bound mineral forms. Even in fertilized forage systems, determining appropriate fertilizer or manure application rates requires a “systems” approach on the part of the manager (Rotz et al. 2005; Wood et al. 2012). Fertilizer additions are simply one input in the system of inputs, outputs, pools, and fluxes that characterize nutrient cycling in a particular ecosystem.

Is The World Converging To A ‘Western Diet’?, Azzeddine Azzam

Department of Agricultural Economics: Faculty Publications

Objective: To test the nutrition transition hypothesis of global dietary convergence to a ‘Western diet’.

Design: Consumer-waste-adjusted FAO Food Balance Sheets are used to construct for each country a Western Diet Similarity Index (WSI), expressed as a ratio of calories from animal-sourced foods, oils, fats and sweeteners to total per capita calories. β-Convergence and associated speed are estimated by growth regressions using 1992–2013 panel data. Speed of convergence, a non-linear function of income per capita, globalisation and urbanisation, determines the steady-state or long-term global WSI. The long-term global WSI is compared with the WSI of the group of countries with …

A Global Database Of Soil Nematode Abundance And Functional Group Composition, Johan Van Den Hoogen, Stefan Geisen, Thomas W. Crowther, Peter Mullin, Many Co-Authors

Department of Plant Pathology: Faculty Publications

As the most abundant animals on earth, nematodes are a dominant component of the soil community. They play critical roles in regulating biogeochemical cycles and vegetation dynamics within and across landscapes and are an indicator of soil biological activity. Here, we present a comprehensive global dataset of soil nematode abundance and functional group composition. This dataset includes 6,825 georeferenced soil samples from all continents and biomes. For geospatial mapping purposes these samples are aggregated into 1,933 unique 1-km pixels, each of which is linked to 73 global environmental covariate data layers. Altogether, this dataset can help to gain insight into …

Deciphering The Past To Inform The Future: Preparing For The Next (“Really Big”) Extreme Event, Debra Pc Peters, N Dylan Burruss, Gregory S. Okin, Jerry L. Hatfield, Stacey Lp Scroggs, Haitao Huang, Colby W. Brungard, Jin Yao

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Climate change will bring more extremes in temperature and precipitation that will impact productivity and ecosystem resilience throughout agroecosystems worldwide. Historical events can be used to identify drivers that impact future events. A catastrophic drought in the US in the 1930s resulted in an abrupt boundary between areas severely impacted by the Dust Bowl and areas that were less severely affected. Historical primary production data confirmed the location of this boundary at the border between two states (Nebraska and Iowa). Local drivers of weather and soils explained production responses across the boundary before and after the drought (1926–1948). During the …

Monk Parakeet (Myiopsitta Monarchus Boddaert, 1783), Michael L. Avery

United States Department of Agriculture Wildlife Services: Staff Publications

Common Names: Monk Parakeet, Quaker Parakeet, Quaker Parrot, Quaker Conure, Grey-headed Parakeet

The natural distribution of the Monk Parakeet (Myiopsitta monachus Boddaert, 1783) extends from southern Bolivia, through Paraguay, southern Brazil and Uruguay to southern Argentina (Fig. 10.1 ). It is documented as invasive in a range of countries, and of these, there are at least 17 countries where they are breeding in the wild, as detailed below. ...

The Monk Parakeet is among the most successful invasive bird species in the world. Unlike many other invasive birds, such as the Ring-necked Parakeet (Psittacula krameri) and the …

Molecular Gut-Content Analysis Of Adult Ground Beetles (Coleoptera: Carabidae) Provides No Evidence Of Predation Of Western Corn Rootworm (Coleoptera: Chrysomelidae) In A Nebraska Corn Agroecosystem, Camila Oliveira-Hofman, Vinícius S. Victor, Lance Meinke, Julie A. Peterson

Department of Entomology: Faculty Publications

This study was conducted to characterize the ground beetle (Coleoptera: Carabidae) community in Nebraska continuous cornfields and investigate the potential for predation of the western corn rootworm, Diabrotica virgifera virgifera LeConte, a key rootfeeding insect pest that is an annual management challenge in this system. Seven collection dates were conducted at five commercial cornfields in west central Nebraska during the growing season of 2014. In each field, carabids were sampled using five 24-h pitfall traps. Carabid specimens were placed in 95% ethanol in the field and stored at –20 °C to preserve DNA. After identification to the species level, DNA …

Soil Sample Timing, Nitrogen Fertilization, And Incubation Length Influence Anaerobic Potentially Mineralizable Nitrogen, Jason Clark, Kristen S. Veum, Fabián G. Fernández, Newell R. Kitchen, James J. Camberato, Paul Carter, Richard Ferguson, David W. Franzen, Daniel E. Kaiser, Carrie A. M. Laboski, Emerson Nafziger, Carl J. Rosen, John E. Sawyer, John F. Shanahan

Department of Agronomy and Horticulture: Faculty Publications

Understanding the variables that affect the anaerobic potentially mineralizable N (PMNan) test should lead to a standard procedure of sample collection and incubation length, improving PMNan as a tool in corn (Zea mays L.) N management. We evaluated the effect of soil sample timing (preplant and V5 corn development stage [V5]), N fertilization (0 and 180 kg ha−1) and incubation length (7, 14, and 28 d) on PMNan (0–30 cm) across a range of soil properties and weather conditions. Soil sample timing, N fertilization, and incubation length affected PMNan differently based on soil and weather conditions. Preplant vs. V5 PMNan …

Mammal Community Structure Through The Paleocene-Eocene Thermal Maximum, Danielle Fraser, S. Kathleen Lyons

School of Biological Sciences: Faculty Publications

Human-mediated species invasion and climate change are leading to global extinctions and are predicted to result in the loss of important axes of phylogenetic and functional diversity. However, the long-term robustness of modern communities to invasion is unknown, given the limited timescales over which they can be studied. Using the fossil record of the Paleocene- Eocene Thermal Maximum (PETM; ~ 56 Ma) in North America, we evaluate mammalian community-level response to a rapid global warming event (5° to 8°C) and invasion by three Eurasian mammalian orders and by species undergoing northward range shifts. We assembled a database of 144 species …

Black Vulture Conflict And Management In The United States: Damage Trends, Management Overview, And Research Needs, Bryan M. Kluever, Morgan Pfeiffer, Scott C. Barras, Brett Dunlap, Lee A. Humberg

United States Department of Agriculture Wildlife Services: Staff Publications

Contrary to rapid declines of many vulture (Accipitridae, Cathartidea) species worldwide, black vulture (Coragyps atratus) populations are increasing and expanding their range in North America. Vultures exhibit complex behaviors and can adapt to any human-dominated landscape or land use. These traits, combined with population growth and range expansion, have contributed to increased human–vulture conflicts. Our goal was to summarize the current status and trends in human–black vulture conflicts (hereafter human– vulture conflicts), review available management strategies, identify knowledge gaps, and provide recommendations to enhance management and understanding of this species and the associated conflicts. We found human–vulture conflicts …

Incorporating Tallgrass Prairie Into Urban Environments, Daniel Hauschild

Department of Environmental Studies: Undergraduate Student Theses

As an agricultural state with a population poised to shift to primarily urban based, Nebraska is in the unique position of being able to decide how people live in modern cities. While the benefits of including green spaces in urban areas are well documented, evidence also suggests that increased biodiversity in these areas compounds those benefits. As such, incorporating elements of functioning natural ecosystems within urban areas can potentially create pockets of sustainable landscapes. Nebraska’s two largest population centers are located on land that was historically tallgrass prairie, an iconic landscape in American history and now almost entirely absent from …

Overture [From Field To Laboratory: A Memorial Volume In Honor Of Robert J. Baker], Robert D. Bradley, David J. Schmidly, Hugh H. Genoways, Lisa C. Bradley

University of Nebraska State Museum: Mammalogy Papers

Introduction to the memorial volume of Special Publications / Museum of Texas Tech University in honor of Robert J. Baker.

First paragraph:

Herein, we use the word “Overture” not in its first meaning, but rather in its second—“An introduction to something more substantial” ([Def. 2], Oxford Dictionaries, Oxford University Press 2018). In our current case, this is the overture to a memorial volume in honor of our friend and colleague Robert J. Baker. Here, his former students and colleagues have taken time and effort to write 43 essays and scientific articles and 54 personal encomia in demonstration of their …

Demographics Of A Painted Turtle (Chrysemys Picta) Population Responding To Drought In The Nebraska Sandhills, Allyson Beard

Honors Program: Senior Projects (Public)

A large portion of herpetofauna species are declining as a result of anthropogenic influences such as habitat destruction and climate change, and turtles are no exception. Studying demographics of turtle populations in a wide variety of settings could help establish a baseline for future species management because demographics such as survival and movement are essential to understanding the ecology of a species. We conducted a long-term mark-recapture study on painted turtles (Chrysemys picta) in a permanent pond in the Nebraska Sandhills to exam population size, survival, and movement of an aquatic turtle as drought conditions changed in a …

Information Resources For Animal Control And Wildlife Damage Management, Stephen M. Vantassel, Michael W. Fall, Serge Lariviére

Wildlife Damage Management Technical Series

A bumper sticker reads, “If you think education is expensive, you oughta try ignorance.” That statement could not be truer in regard to wildlife damage management. Being willing to learn is a critical attitude for everyone involved in wildlife damage management. Since wildlife damage management intersects so many other disciplines, no single person can be an expert in all of them. In addition, the arrival of an invasive species, changes in building practices (e.g., egress windows, ridge vents), or the implementation of new regulations can confound traditional practices and require new control methods. Thus, it is important to provide a …

Traffic Noise And Sexual Selection: Studies Of Anthropogenic Impact On Bird Songs And Undergraduate Student Reasoning Of Evolutionary Mechanisms, Sarah Spier

School of Natural Resources: Dissertations, Theses, and Student Research

Humans have transformed much of the natural landscape and are continuing to do so at an accelerated rate, compromising natural areas that serve as important habitat for many species. Roads impact much of the environment as they fragment habitat and introduce traffic noise into the acoustic environment, deferentially affecting wildlife in roadside habitat. I explored how traffic noise affects the detection of birds based on whether their vocalizations were masked by traffic noise. Masked species detection was not affected by an increase in traffic noise amplitude, while there was a negative effect of traffic noise amplitude on unmasked species detection, …

Traffic Noise And Sexual Selection: Studies Of Anthropogenic Impact On Bird Songs And Undergraduate Student Reasoning Of Evolutionary Mechanisms, Sarah Spier

School of Natural Resources: Dissertations, Theses, and Student Research

Humans have transformed much of the natural landscape and are continuing to do so at an accelerated rate, compromising natural areas that serve as important habitat for many species. Roads impact much of the environment as they fragment habitat and introduce traffic noise into the acoustic environment, deferentially affecting wildlife in roadside habitat. I explored how traffic noise affects the detection of birds based on whether their vocalizations were masked by traffic noise. Masked species detection was not affected by an increase in traffic noise amplitude, while there was a negative effect of traffic noise amplitude on unmasked species detection, …

Discontinuity Analysis Reveals Alternative Community Regimes During Phytoplankton Succession, David G. Angeler, Craig R. Allen, Dirac L. Twidwell Jr., Monika Winder

School of Natural Resources: Faculty Publications

It is well-recognized in plankton ecology that phytoplankton development can lead to distinct peaks (i.e., blooms) during spring and summer. We used a 5-year (2007–2011) phytoplankton data set and utilized discontinuity analysis to assess resilience attributes of spring and summer blooms based on the cross-scale resilience model. Using the size structure (i.e., cross-scale structure as an indicator of resilience) in the sampled plankton data, we assessed whether spring and summer blooms differ substantially between but not within blooms; that is, whether they comprise alternative community regimes. Our exploratory study supported this expectation and more broadly resilience theory, which posits that …

Proposal To Build A Green Roof On Top Of Hardin Hall On Unl's East Campus, Abbie Andersen

Department of Environmental Studies: Undergraduate Student Theses

The purpose of this study is to research the feasibility of implementing more green roofs around The University of Nebraska-Lincoln’s campuses. To do this investigation a systematic literature review process was used gathering multiple relevant, peer reviewed articles from UNL’s “Encore” search engine. The data was then organized into categories that described the necessary considerations that needed to be made to retrofit green roofs, information on their many benefits, and finally the potential energy cost savings that can be obtained through use of a green roof. From here a proposal for a model green roof on top of UNL’s Hardin …

Measuring & Monitoring Plant Populations, Caryl L. Elzinga, Daniel W. Salzer, John W. Willoughby

United States Bureau of Land Management: Staff Publications

The root of the word monitoring means "to warn," and an essential purpose of monitoring is to raise a warning flag that the current course of action is not working. Monitoring is a powerful tool for identifying problems in the early stages, before they become dramatically obvious or crises. If identified early, problems can be addressed while cost-effective solutions are still available. For example, an invasive species that threatens a rare plant population is much easier to control at the initial stages of invasion, compared to eradicating it once it is well established at a site. Monitoring is also critical …

A Prairie And Its People: Conflict And Cooperation. E. Frank Schramm, Joseph E.A. Alexis, The Amos Eager Family, The University Of Nebraska And Other Notable Owners Of Nine Mile Prairie And Its Environs, Jon H. Oberg

University of Nebraska State Museum: Staff and Affiliates, Publications

This study looks at the social history of individuals connected to a particular geographic quadrant -- Section 1 of Middle Creek precinct, Lancaster County, Nebraska. This an area famous for its natural history, as it is the home of Nine Mile Prairie. But the property owners in this section have a colorful history that encompasses the fields of sports, politics, academics, foreign wars, and crime. The study looks primarily at E. Frank Schramm, Joseph E.A. Alexis, and the Amos Eager family, who with other owners contributed importantly to the history and development of the City of Lincoln and the State …

Implications Of Channel Catfish Movement In An Internationally Managed System, Henry Hansen

School of Natural Resources: Dissertations, Theses, and Student Research

The large-scale movements and spatial behavior of channel catfish in the Red River of the North, have direct interactions with geopolitics, anthropogenic structures, and ecosystems. Investigating the spatial dynamics and exploitation of this mobile and internationally managed fish species provides opportunities for resource managers to design evidence­-based policy for the diverse interest groups that utilize the fishery. My thesis comprised two parts: 1) characterize system­wide movement and survival patterns using mark­-recapture methods and acoustic telemetry and 2) project the interaction of hypothetical exploitation scenarios and alternative movement methodologies to assess the fishery from an ecosystem service flow perspective. Channel catfish …

Monitoring Spatial And Temporal Variabilities Of Gross Primary Production Using Maiac Modis Data, Marcos Fernandez-Martinez, Rong Yu, John Gamon, Gabriel Hmimina, Iolanda Filella, Manuela Balzarolo, Benjamin Stocker, Josep Penuelas

Center for Advanced Land Management Information Technologies: Publications

Remotely sensed vegetation indices (RSVIs) can be used to efficiently estimate terrestrial primary productivity across space and time. Terrestrial productivity, however, has many facets (e.g., spatial and temporal variability, including seasonality, interannual variability, and trends), and different vegetation indices may not be equally good at predicting them. Their accuracy in monitoring productivity has been mostly tested in single-ecosystem studies, but their performance in different ecosystems distributed over large areas still needs to be fully explored. To fill this gap, we identified the facets of terrestrial gross primary production (GPP) that could be monitored using RSVIs. We compared the temporal and …

Estimating The Use Of Public Lands: Integrated Modeling Of Open Populations With Convolution Likelihood Ecological Abundance Regression, Lutz F. Gruber, Erica F. Stuber, Joseph J. Fontaine

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

We present an integrated open population model where the population dynamics are defined by a differential equation, and the related statistical model utilizes a Poisson binomial convolution likelihood. Key advantages of the proposed approach over existing open population models include the flexibility to predict related, but unobserved quantities such as total immigration or emigration over a specified time period, and more computationally efficient posterior simulation by elimination of the need to explicitly simulate latent immigration and emigration. The viability of the proposed method is shown in an in-depth analysis of outdoor recreation participation on public lands, where the surveyed populations …

The Trichoptera Of Panama X. The Quebrada Rambala Drainage, With Description Of 19 New Species Of Microcaddisflies (Trichoptera: Hydroptilidae), Steven C. Harris, Brian J. Armitage

Insecta Mundi

The Quebrada Rambala drainage is found immediately south and south-southeast of the town of Chiriqui Grande and east of Rambala on the Caribbean coast. It is one of two tributaries of the Rio Margarita watershed, a small, lowland drainage with elevations up to 180 m. During the 2014-2017 period, collections of caddisflies (Insecta: Trichoptera), employing both UV-light and Malaise traps, were made at two locations on Quebrada Rambala proper, and four locations on its unnamed tributary, all on a land area of approximately 1 ha. As a result, 127 species of caddisflies were identified, including 59 species of microcaddisflies. A …

Size Estimation Of Pre‐Columbian Caribbean Fish, Sandrine Grouard, Sophia Perdikaris, Nídia Cristina Espíndola Rodrigues, Irvy R. Quitmyer

School of Global Integrative Studies: Faculty Publications

In this contribution, we present a methodological approach to the identification of pre‐Columbian Caribbean fisheries and examine the interrelationships of exploitation according to size for eight fish families, in a diachronic perspective for the Lesser Antilles. Based on the principles of size and growth allometries, biometric repositories have been reconstructed for modern families that represent different ecological environments: Holocentridae, Serranidae, Carangidae, Lutjanidae, Haemulidae, Scaridae, Acanthuridae, and Scombridae. The measured fish bone elements were selected based on their robustness and potential for recovery at archaeological sites. This resulted in a sample size totaling 563 modern osteological specimens, which provided reconstructed standard, …

A Hierarchical Bayesian Approach For Handling Missing Classification Data, Alison C. Ketz, Therese L. Johnson, Mevin B. Hooten, N. Thompson Hobbs

United States National Park Service: Publications

1. Ecologists use classifications of individuals in categories to understand composition of populations and communities. These categories might be defined by demo- graphics, functional traits, or species. Assignment of categories is often imperfect, but frequently treated as observations without error. When individuals are observed but not classified, these “partial” observations must be modified to include the missing data mechanism to avoid spurious inference.

2. We developed two hierarchical Bayesian models to overcome the assumption of perfect assignment to mutually exclusive categories in the multinomial distribu- tion of categorical counts, when classifications are missing. These models incorporate auxiliary information to adjust the posterior …

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Machine Learning To Classify Animal Species In Camera Trap Images: Applications In Ecology, Michael A. Tabak, Mohammad S. Norouzzadeh, David W. Wolfson, Steven J. Sweeney, Kurt C. Vercauteren, Nathan P. Snow, Joseph M. Halseth, Paul A. Di Salvo, Jesse S. Lewis, Michael D. White, Ben Teton, James C. Beasley, Peter E. Schlichting, Raoul K. Boughton, Bethany Wight, Eric S. Newkirk, Jacob S. Ivan, Eric A. Odell, Ryan K. Brook, Paul M. Lukacs, Anna K. Moeller, Elizabeth G. Mandeville, Jeff Clune, Ryan S. Miller

United States Department of Agriculture Wildlife Services: Staff Publications

1. Motion-activated cameras (“camera traps”) are increasingly used in ecological and management studies for remotely observing wildlife and are amongst the most powerful tools for wildlife research. However, studies involving camera traps result in millions of images that need to be analysed, typically by visually observing each image, in order to extract data that can be used in ecological analyses.

2. We trained machine learning models using convolutional neural networks with the ResNet-18 architecture and 3,367,383 images to automatically classify wildlife species from camera trap images obtained from five states across the United States. We tested our model on an …

Diurnal Habitat Selection Of Migrating Whooping Crane In The Great Plains, David M. Baasch, Patrick D. Farrell, Aaron T. Pearse, David A. Brandt, Andrew J. Caven, Mary J. Harner, Greg D. Wright, Kristine L. Metzger

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Available stopover habitats with quality foraging opportunities are essential for migrating waterbirds, including Whooping Crane (Grus americana). Several studies have evaluated habitats used by Whooping Crane for roosting throughout its migration corridor; however, habitats associated with foraging and other diurnal activities have received less attention. We used data collected from 42 Whooping Crane individuals that included 2169 diurnal use locations within 395 stopover sites evaluated during spring 2013 to fall 2015 to assess diurnal habitat selection throughout the U.S. portion of the migration corridor. We found that Whooping Crane selected wetland land-cover types (i.e., open water, riverine, and semipermanent wetlands) …

Viral Emergence In Marine Mammals In The North Pacific May Be Linked To Arctic Sea Ice Reduction, Elizabeth Vanwormer, J. A.K. Mazet, A. Hall, V. A. Gill, P. L. Boveng, J. M. London, T. Gelatt, B. S. Fadely, M. E. Lander, J. Sterling, V. N. Burkanov, R. R. Ream, P. M. Brock, L. D. Rea, B. R. Smith, A. Jeffers, M. Henstock, M. J. Rehberg, K. A. Burek-Huntington, S. L. Crosby, J. A, Hammond, T. Goldstein

School of Veterinary and Biomedical Sciences: Faculty Publications

Climate change-driven alterations in Arctic environments can influence habitat availability, species distributions and interactions, and the breeding, foraging, and health of marine mammals. Phocine distemper virus (PDV), which has caused extensive mortality in Atlantic seals, was confirmed in sea otters in the North Pacific Ocean in 2004, raising the question of whether reductions in sea ice could increase contact between Arctic and sub-Arctic marine mammals and lead to viral transmission across the Arctic Ocean. Using data on PDV exposure and infection and animal movement in sympatric seal, sea lion, and sea otter species sampled in the North Pacific Ocean from …

Relationships Between Wildfire Burn Severity, Cavity-Nesting Bird Assemblages, And Habitat In An Eastern Ponderosa Pine Forest, Emma C. Keele, Victoria M. Donovan, Caleb P. Roberts, Sarah M. Nodskov, Carissa L. Wonkka, Craig R. Allen, Larkin A. Powell, David A. Wedin, David G. Angeler, Dirac Twidwell

Department of Agronomy and Horticulture: Faculty Publications

Historically, eastern ponderosa pine (Pinus ponderosa) forests were described as sparse patches of old-growth trees maintained by frequent, low-severity fires; however, in recent decades, there have been a number of large mixed-severity wildfires throughout the range of these forests. Wildlife responses to severe fire disturbance in eastern ponderosa pine forests are not well understood. Our study investigates how cavity-nesting bird species in an eastern ponderosa pine forest are impacted by burn severity. The objectives of our study were to: (1) identify the community composition of cavity-nesting birds in a 27 y old burn of mixed severity, (2) assess …