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An Integrated Food, Energy, And Water Nexus, Human Well-Being, And Resilience (Few-Wise) Framework: New Mexico, Kamini Yadav, Hatim M. Geli, Andres F. Cibils, Michael Hayes, Alexander Fernald, James Peach, Mohammed N. Sawalhah, Vincent C. Tidwell, Lindsay E. Johnson, Ashraf J. Zaied, Melakeneh G. Gedefaw

School of Natural Resources: Faculty Publications

Interconnected food, energy, and water (FEW) nexus systems face many challenges to support human well-being (HWB) and maintain resilience, especially in arid and semiarid regions like New Mexico (NM), United States (US). Insufficient FEW resources, unstable economic growth due to fluctuations in prices of crude oil and natural gas, inequitable education and employment, and climate change are some of these challenges. Enhancing the resilience of such coupled socio-environmental systems depends on the efficient use of resources, improved understanding of the interlinkages across FEW system components, and adopting adaptable alternative management strategies. The goal of this study was to develop a …

Palmitoleate Protects Against Zika Virus-Induced Placental Trophoblast Apoptosis, Philma Glora Muthuraj, Aryamav Pattnaik, Prakash K. Sahoo, Md Torikul Islam, Asit K. Pattnaik, Siddappa N. Byrareddy, Corrine K. Hanson, Ann Anderson Berry, Stephen D. Kachman, Sathish Kumar Natarajan

Department of Nutrition and Health Sciences: Faculty Publications

Zika virus (ZIKV) infection in pregnancy is associated with the development of microcephaly, intrauterine growth restriction, and ocular damage in the fetus. ZIKV infection of the placenta plays a crucial role in the vertical transmission from the maternal circulation to the fetus. Our previous study suggested that ZIKV induces endoplasmic reticulum (ER) stress and apoptosis of placental trophoblasts. Here, we showed that palmitoleate, an omega-7 monounsaturated fatty acid, prevents ZIKV-induced ER stress and apoptosis in placental trophoblasts. Human trophoblast cell lines (JEG-3 and JAR) and normal immortalized trophoblasts (HTR-8) were used. We observed that ZIKV infection of the trophoblasts resulted …

Distinctive Gene Expression Patterns And Imprinting Signatures Revealed In Reciprocal Crosses Between Cattle Sub-Species, Ruijie Liu, Rick Tearle, Wai Yee Low, Tong Chen, Dana Thomsen, Timothy P L Smith, Stefan Hiendleder, John L. Williams

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Background: There are two genetically distinct subspecies of cattle, Bos taurus taurus and Bos taurus indicus, which arose from independent domestication events. The two types of cattle show substantial phenotypic differences, some of which emerge during fetal development and are reflected in birth outcomes, including birth weight. We explored gene expression profiles in the placenta and four fetal tissues at mid-gestation from one taurine (Bos taurus taurus; Angus) and one indicine (Bos taurus indicus; Brahman) breed and their reciprocal crosses. Results: In total 120 samples were analysed from a pure taurine breed, an indicine breed and their reciprocal cross fetuses, …

Effects Of Farrowing Stall Layout And Number Of Heat Lamps On Sow And Piglet Behavior, Suzanne Leonard, Hongwei Xin, Tami M. Brown-Bandl, Brett C. Ramirez, Anna K. Johnson, Somak Dutta, G.A. Rohrer

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Farrowing stalls are used in the United States swine industry to reduce pre-weaning piglet mortality, enable efficient individual animal management, and decrease facility construction and operating costs. The quantity and quality of space provided for sows and piglets in farrowing stalls are important economic and welfare considerations. To further explore the impacts of farrowing stall space allocation, a large-scale field study was conducted to compare sow and piglet behavior when housed in three farrowing stall layouts (TSL – traditional stall layout, ECSL – expanded creep area stall layout, ESCSL – expanded sow and creep area stall layout) with either one …

Determining Crop Available Nutrients From Manure, Charles Shapiro, Leslie J. Johnson, Amy Schmidt, Richard Koelsch

University of Nebraska-Lincoln Extension: Historical Materials

This NebGuide discusses the availability and use of manure nutrients for field crop production. When managed correctly, nutrients in livestock manure can be a valuable resource. When managed improperly, however, these same nutrients represent a potential environmental pollutant. Accurate crediting of manure nutrients within a total crop nutrient program is fundamental to utilizing manure as a resource. This NebGuide illustrates how to estimate the crop available manure nutrients (part c, Figure 1) and calculate an agronomically based manure application rate. There are other tools available that do the calculations for you. This NebGuide will explain each step of the process. …

Corrigendum To: Psxii-19 Urine Metabolomics Analysis Associated With Feed Efficiency On Crossbred Steers During The Growing And Finishing Period On Forage- And Concentrate-Based Diets, Virginia Artegoitia, John Newman, Ron Lewis, Andrew P. Foote, Harvey C. Freetly

Roman L. Hruska U.S. Meat Animal Research Center: Reports

No abstract provided.

Invited Review: Mineral Nutrition Considerations For Extensive Sheep Production Systems, W. C. Stewart, J. D. Scasta, J. B. Taylor, T. W. Murphy, A. A.M. Julian

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Purpose: Our purpose is to discuss contemporary and pertinent considerations related to mineral-supplementation strategies for sheep grazing marginal rangelands in extensively managed production systems. Sources: Grey literature, peer-reviewed literature, and data (published and unpublished) from co-authors were used. Synthesis: Precision trace-mineral nutrition of sheep that are grazing extensive production systems requires a comprehensive understanding of the sheep and the grazing environment. Generally, extensive sheep production systems are found in remote geographical regions composed of marginal rangelands not suitable for cultivated crop farming or improved forages. Sheep production is subject to the accessibility and availability of grazable forage, which may vary …

Incompatibility Group I1 (Inci1) Plasmids: Their Genetics, Biology, And Public Health Relevance, Steven L. Foley, Pravin R. Kaldhone, Steven C. Ricke, Jing Han

United States Food and Drug Administration: Publications

Bacterial plasmids are extrachromosomal genetic elements that often carry antimicrobial resistance (AMR) genes and genes encoding increased virulence and can be transmissible among bacteria by conjugation. One key group of plasmids is the incompatibility group I1 (IncI1) plasmids, which have been isolated from multiple Enterobacteriaceae of food animal origin and clinically ill human patients. The IncI group of plasmids were initially characterized due to their sensitivity to the filamentous bacteriophage If1. Two prototypical IncI1 plasmids, R64 and pColIb-P9, have been extensively studied, and the plasmids consist of unique regions associated with plasmid replication, plasmid stability/maintenance, transfer machinery apparatus, single-stranded DNA …

Nebline, June 2021

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Choosing Quality Child Care: Guidance For Parents

Eastern Carpenter Bees

Eating for Brain Health

Recipe of the Month

Naturally Occurring Contaminants, Part 4 of a Series — Arsenic

Efficiency Is Key To Profit On Stocker Cattle

Common Grub Control Questions

Garden Guide: Things to do This Month

Heart of 4-H Volunteer Award: Jen & Jesse Metcalf

4th Graders Learn About “Farm to Fork” During Virtual Ag Festival

Statewide 4-H Companion Animal Challenge Results

Extension News

Extension Calendar

STEM Zoom Workshops in June

Seeking Lancaster County Fair Historic Memorabilia and Stories

Promise And Complexity Of Lupus Mouse Models, Erica Moore, Joshua A. Reynolds, Anne Davidson, Stefania Gallucci, Laurence Morel, Deepak A. Rao, Howard A. Young, Chaim Putterman

United States Public Health Resources

As a follow up to a 2010 meeting deliberating on the benefits of studying mouse models of systemic lupus erythematosus (SLE), the virtual conference “Mouse models of lupus 10 years later” convened on 10 December 2020 to address a challenging decade that saw few new therapies approved, despite leaps in knowledge

Abnormalities in both innate and adaptive immunity characterize SLE, a systemic autoimmune disease with potentially severe consequences in patients. Treatment has traditionally been limited to broad-acting, side-effect-heavy immunosuppressants, which are also incompletely effective. Thus, the need for specific therapies targeting the pathogenic mechanisms of SLE remains unmet. Affirming the …

Evolutionary Theory: Establishing Positive Learning Environments, Lawrence C. Scharmann

Department of Teaching, Learning, and Teacher Education: Faculty Publications

A simple but effective technique for self-assessing readiness to teach a particular topic is to explicitly reflect on the student questions, ‘Why do I need toknow this stuff?’ and ‘What’s in it for me?’ Faced with these questions, real or implied, instructional decisions should be made to better address and reflect the needs of target learners. If the teacher’s response does not have sufficient perceived relevance to the target learner, students find it quite easy to dismiss the ‘stuff’ as unimportant – something to be memorised for a test and forgotten. Preparation to teach evolution often carries with it an …

Remembering Elaine Bachel 1946-2021, Ruthie Stearns

Nebraska Bird Review

Elaine Bachel was born June 6, 1946, in Itasca County, Minnesota, and passed away May 22, 2021, in Lincoln. She lived in Minnesota until she was ten, and it was there that she developed her love of the outdoors, especially birds. When her father passed away, Elaine, her sister and her mother moved to Omaha to live with her grandmother. She graduated from Omaha South High School and then attended college in Omaha, graduating as a registered nurse in 1968. She worked for many years for Lincoln ENT physician Dr. Charles Barton. It was in working for him and traveling …

Paul A. Johnsgard 1931-2021, Paul Johnsgard

Nebraska Bird Review

Dr Johnsgard's self-penned obituary & a photo

Incorrectly Aged, Identified And Classified: Revisiting Nebraska’S 1968 ‘Barnacle Goose’ Record, Joel G. Jorgensen, Stephen J. Brenner, W. Ross Silcock

Nebraska Bird Review

On 2 November 1968 in northeastern Otoe County, Nebraska, Milton Muncie harvested a bird (herein referred to as the 1968 specimen), subsequently identified as an immature Barnacle Goose (Branta leucopsis), from a flock of about 40 Cackling Geese (Branta hutchinsii; Cortelyou 1969). The occurrence was reported not only as the first record of a Barnacle Goose for Nebraska, but also the first record for the North American Interior and West (Cortelyou 1969). Cortelyou’s (1969) brief article also included a photograph of the mounted specimen. At the time and when subsequently reviewed by various authors, the identity of the 1968 specimen …

Paul Austin Johnsgard: Memories Of An Exceptional Naturalist, Allison E. Johnson, Charles R. Brown

Nebraska Bird Review

On May 28, 2021 the world lost one of its most dogged advocates, and we lost an amazing teacher, naturalist, and friend. Paul has told you in his own words in the previous pages where he was from, where he was educated, about the immense number of scholarly articles and books he published, and about his beautiful art that brought the wild to all of us (https://digitalcommons.unl.edu/zeabook/30/), but we wanted to share the person we knew Paul to be, and to relive some of our memories of him. While Paul’s body of work will continue to impact the ornithological and …

Spring Field Report, March - May 2021, W. Ross Silcock

Nebraska Bird Review

A total of 163 observers contributed to this report. This spring several observers were quite active statewide, resulting in interesting discoveries among waterfowl hybrids, subspecies distributions, breeding and spatial range expansions, and more than usual early and late dates and high counts, not to mention a couple of extreme rarities. Speaking of BONO, readers will note a new section under “Species Accounts” that deals with hybrids reported in Nebraska. A surprising 47 are listed, 26 of these waterfowl. If you like waterfowl hybrids, read on! This report deals with 14 such hybrids, four newly documented for the state. Several non-waterfowl …

Conference Report Of Why R? Turkey 2021, Mustafa Cavus, Olgun Aydin, Ozan Evkaya, Ozancan Ozdemir, Deniz Bezer, Ugur Dar

The R Journal

The Why R? Turkey 2021 as a three-day online conference was organized to bring together researchers and professionals from Turkey on April 16-17-18, 2021. We hereby aimed to promote the R community in Turkey by bringing R users with different backgrounds such as genetics, sociology, finance, economy, bio-statistics. There were 8 thematic sessions and 18 invited speakers. In this article, it is aimed to describe the preparation phase, technical details, and the impact of the conference on audience.

Conversations In Time: Interactive Visualization To Explore Structured Temporal Data, Earo Wang, Dianne Cook

The R Journal

Temporal data often has a hierarchical structure, defined by categorical variables describing different levels, such as political regions or sales products. The nesting of categorical variables produces a hierarchical structure. The tsibbletalk package is developed to allow a user to interactively explore temporal data, relative to the nested or crossed structures. It can help to discover differences between category levels, and uncover interesting periodic or aperiodic slices. The package implements a shared tsibble object that allows for linked brushing between coordinated views, and a shiny module that aids in wrapping timelines for seasonal patterns. The tools are demonstrated using two …

The Nebraska Bird Review, Volume 89 June 2021 Number 2

Nebraska Bird Review

Spring Field Report, March - May 2021, by W. Ross Silcock … 50

Incorrectly Aged, Identified and Classified: Revisiting Nebraska’s 1968 ‘Barnacle Goose’ Record, by Joel G. Jorgensen, Stephen J. Brenner, and W. Ross Silcock …80

Paul A. Johnsgard by Paul A. Johnsgard … 92

Paul Austin Johnsgard: Memories of an Exceptional Naturalist by Allison E. Johnson and Charles R. Brown …94

Breeding Status of Louisiana Waterthrush (Parkesia motacilla) in the Niobrara River Valley, North-central Nebraska by W. Ross Silcock … 97

Remembering Elaine Bachel 1946-2021, by Ruthie Stearns …101

Subscription and Organization Information …103

Real-Life Conundrums In The Struggle For Institutional Transformation, Julia Mcquillan, Nestor Hernandez

Department of Sociology: Faculty Publications

Intersecting systems of inequality (i.e., gender and race/ethnicity) are remarkably resistant to change. Many universities, however, seek National Science Foundation Institutional Transformation awards to change processes, procedures, and cultures to make science, technology, engineering, and mathematics (STEM) departments more inclusive. In this article we describe a case study with observations for eight years of before (2000–2007), five during (2008–2013), and seven after (2014–2020) intensive efforts to increase women through reducing barriers and increasing access to women. Finally, we reflect on flawed assumptions built into the proposal, the slow and uneven change in the proportion of women over time, the strengths …

Comparing Management Programs To Reduce Red–Tailed Hawk Collisions With Aircraft, Brian Washburn, Craig K. Pullins, Travis L. Guerrant, Gregory J. Martinelli, Scott F. Beckerman

United States Department of Agriculture Wildlife Services: Staff Publications

Wildlife-aircraft collisions (wildlife strikes) pose a serious safety risk to aircraft. Raptors (i.e., hawks and owls) are one of the most frequently struck guilds of birds within North America. Although raptors (most notably red-tailed hawks [Buteo jamaicensis]) are commonly managed at most airports and military bases, there is no scientific information available regarding comparisons of the efficacy of raptor management programs for reducing raptor-aircraft collisions. Therefore, we conducted a study to examine the efficacy of 2 raptor hazard management programs implemented at Chicago's O'Hare International Airport (ORD). The first raptor management program (Phase I) occurred during January 2010–June 2013 and …

Presence-Absence Sampling Plans For Stink Bugs (Hemiptera: Pentatomidae) In The Midwest Region Of The United States, Rafael Carlesso Aita, Daniela T. Pezzini, Eric C. Burkness, Christina D. Difonzo, Deborah L. Finke, Thomas E. Hunt, Janet J. Knodel, Christian H. Krupke, Lia Marchi-Werle, Brian Mccornack, Andrew P. Michel, Christopher R. Philips, Nicholas J. Seiter, Adam J. Varenhorst, Robert J. Wright, William D. Hutchison, Robert L. Koch

Department of Entomology: Faculty Publications

Stink bugs represent an increasing risk to soybean production in the Midwest region of the United States. The current sampling protocol for stink bugs in this region is tailored for population density estimation and thus is more relevant to research purposes. A practical decision-making framework with more efficient sampling effort for management of herbivorous stink bugs is needed. Therefore, a binomial sequential sampling plan was developed for herbivorous stink bugs in the Midwest region. A total of 146 soybean fields were sampled across 11 states using sweep nets in 2016, 2017, and 2018. The binomial sequential sampling plans were developed …

Morphophysiological And Molecular Characterization Of Millet (Panicum Miliaceum L.) Varieties For Crop Improvement In Western Europe, Massimo Vischi, Nicola Zorzin, Maria Bernhart, Johanna Winkler, Dipak Santra, Carla Pappalardo, Stefano Marchetti

Department of Agronomy and Horticulture: Faculty Publications

Background

Global warming and issues in favour of a more sustainable agriculture suggest a reconsideration of minor cereals in European agrosystems. Compared to other summer crops, proso millet has a remarkable drought resistance and could be used to improve crop rotation and biodiversity. Proso millet is also increasingly sought by industry to produce novel foods such as those designed for celiac patients. In this study, a thorough characterization of 11, commercially available, proso millet (Panicum milliaceum L.) varieties was carried out as a preliminary step for crop reintroduction and breeding in Western Europe.

Methods

The cultivars under evaluation were …

James Davidson Fawcett (1933–2020): Imbibing With The Kiwi, Louis A. Somma

Papers in Herpetology

An obituary and summary of the life of James D. Fawcett (1933-2020), herpetologist and instructor and professor of Biology at University of Nebraska at Omaha, 1972-2015. Includes bibliography of his works, list of master's theses chaired, and recollections of former students.

Dynamic Observers For Unknown Populations, Chris Guiver, Nathan Poppelreiter, Richard Rebarber, Brigitte Tenhumberg, Stuart Townley

Brigitte Tenhumberg Papers

Dynamic observers are considered in the context of structuredpopulation modeling and management. Roughly, observers combine a known measured variable of some process with a model of that process to asymptotically reconstruct the unknown state variable of the model. We investigate the potential use of observers for reconstructing population distributions described by density-independent (linear) models and a class of density-dependent (nonlinear) models. In both the density-dependent and -independent cases, we show, in several ecologically reasonable circumstances, that there is a natural, optimal construction of these observers. Further, we describe the robustness these observers exhibit with respect to disturbances and uncertainty in …

Longitudinal Study Of Pogonomyrmex Occidentalis (Hymenoptera: Formicideae), Western Harvester Ant, Colony Survival In Western Nebraska, Kathleen H. Keeler

School of Biological Sciences: Faculty Publications

I observed individual western harvester ant (Pogonomyrmex occidentalis) colonies, marked between 1977 and 1994, to live a mean of 15.65 years (n = 112). The longest-lived colony lived 42 years.

Overview Of The Microbiome Among Nurses Study (Micro-N) As An Example Of Prospective Characterization Of The Microbiome Within Cohort Studies, Christine Everett, Chengchen Li, Jeremy E. Wilkinson, Long H. Nguyen, Lauren J. Mciver, Kerry Ivey, Jacques Izard, Natalia Palacios, A. Heather Eliassen, Walter C. Willett, Alberto Ascherio, Qi Sun, Shelley S. Tworoger, Andrew T. Chan, Wendy S. Garrett, Curtis Huttenhower, Eric B. Rimm, Mingyang Song

Department of Food Science and Technology: Faculty Publications

A lack of prospective studies has been a major barrier for assessing the role of the microbiome in human health and disease on a population-wide scale. To address this significant knowledge gap, we have launched a large-scale collection targeting fecal and oral microbiome specimens from 20,000 women within the Nurses’ Health Study II cohort (the Microbiome Among Nurses study, or Micro-N). Leveraging the rich epidemiologic data that have been repeatedly collected from this cohort since 1989; the established biorepository of archived blood, urine, buccal cell, and tumor tissue specimens; the available genetic and biomarker data; the cohort’s ongoing follow-up; and …

Alfaxalone Successfully Immobilizes Small Indian Mongooses (Urva Auropunctata): A Field Report, Caroline C. Sauvé, Yves Rondenay, Are R. Berentsen, Mel J. Rivera-Rodriguez, Patrick A. Leighton

United States Department of Agriculture Wildlife Services: Staff Publications

We investigated intramuscular administration of alfaxalone (5.3–10.0 mg/kg) as an immobilizing agent in free-ranging small Indian mongooses (Urva auropunctata) on the island of St. Kitts, West Indies. From 5–11 January 2020, we successfully immobilized 10 of 11 mongooses. Alfaxalone provided rapid onset (median = 3 min) of immobilization. Mean duration of immobilization was 16.8 ± 3 min. Mean recovery time was 5.6 ± 1 min. There was no effect of dose administered on induction, anesthesia, or recovery times at the dose range used. We concluded that alfaxalone represents an effective alternative to dissociative agents for the immobilization of free-ranging mongooses. …

Strategic Testing Approaches For Targeted Disease Monitoring Can Be Used To Inform Pandemic Decision-Making, James D. Nichols, Tiffany L. Bogich, Emily Howerton, Ottar N. Bjørnstad, Rebecca K. Borchering, Matthew Ferrari, Murali Haran, Christopher Jewell, Kim M. Pepin, William J.M. Probert, Juliet R.C. Pulliam, Michael C. Runge, Michael Tildesley, Cecile Viboud, Katriona Shea

United States Department of Agriculture Wildlife Services: Staff Publications

More than 1.6 million Servere Acute Respiratory Syndrome Cronovirus 2(SARS-COV-2)tests were administered daily in the United States at the peak of the epidemic, with a significant focus on individual treatment. Here, we show that objective-driven, strategic sampling designs and analyses can maximize information gain at the population level, which is necessary to increase situational awareness and predict, prepare for, and respond to a pandemic, while also continuing to inform individual treatment. By focusing on specific objectives such as individual treatment or disease prediction and control (e.g., via the collection of population- level statistics to inform lockdown measures or vaccine rollout) …

An Evaluation Of Body-Grip Trap Trigger Configurations For Reducing River Otter Take Incidental To Beaver Trapping, Alec J. Sundelius, Nicholas Forman, Nathan M. Roberts, Shawn T. Rossler, David B. Ruid, Robert C. Willging

United States Department of Agriculture Wildlife Services: Staff Publications

River otter (Lontra canadensis) populations in North America have been the focus of significant restoration efforts. Wildlife management agencies, concerned about the unintentional take of river otters incidental to beaver (Castor canadensis) trapping, may recommend techniques to avoid capturing river otters. River otter avoidance techniques that are ineffective or diminish trap performance for beavers are undesirable. We conducted a field evaluation in 2015 and 2016 in Wisconsin to assess how two trigger configurations (offset and center) on body-grip traps would affect the incidental capture rate of river otters during beaver trapping. We also evaluated effects of …