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Exposure Of Predatory And Scavenging Birds To Anticoagulant Rodenticides In France: Exploration Of Data From French Surveillance Programs, Meg-Anne Moriceau, Sébastien Lefebvre, Isabelle Fourel, Etienne Benoit, Florence Buronfosse-Roque, Pascal Orabi, Barnett A. Rattner, Virginie Lattard Nov 2021

Exposure Of Predatory And Scavenging Birds To Anticoagulant Rodenticides In France: Exploration Of Data From French Surveillance Programs, Meg-Anne Moriceau, Sébastien Lefebvre, Isabelle Fourel, Etienne Benoit, Florence Buronfosse-Roque, Pascal Orabi, Barnett A. Rattner, Virginie Lattard

United States Geological Survey: Staff Publications

Wild raptors are widely used to assess exposure to different environmental contaminants, including anticoagulant rodenticides (ARs). ARs are used on a global scale for rodent control, and act by disruption of the vitamin K cycle that results in haemorrhage usually accompanied by death within days. Some ARs are highly persistent and bioaccumulative, which can cause significant exposure of non-target species.We characterized AR exposure in a heterogeneous sample of dead raptors collected over 12 years (2008–2019) in south-eastern France. Residue analysis of 156 liver samples through LC-MS/MS revealed that 50% (78/156) were positive for ARs, with 13.5% (21/156) having summed second-generation …


Going Up Inflame: Reviewing The Underexplored Role Of Inflammatory Programming In Stress-Induced Intrauterine Growth Restricted Livestock, Zena M. Hicks, Dustin T. Yates Nov 2021

Going Up Inflame: Reviewing The Underexplored Role Of Inflammatory Programming In Stress-Induced Intrauterine Growth Restricted Livestock, Zena M. Hicks, Dustin T. Yates

Department of Animal Science: Faculty Publications

The impact of intrauterine growth restriction (IUGR) on health in humans is well-recognized. It is the second leading cause of perinatal mortality worldwide, and it is associated with deficits in metabolism and muscle growth that increase lifelong risk for hypertension, obesity, hyperlipidemia, and type 2 diabetes. Comparatively, the barrier that IUGR imposes on livestock production is less recognized by the industry. Meat animals born with low birthweight due to IUGR are beset with greater early death loss, inefficient growth, and reduced carcass merit. These animals exhibit poor feed-to-gain ratios, less lean mass, and greater fat deposition, which increase production costs …


Correlated Evolution Of Distinct Signals Associated With Increased Social Selection In Female White-Shouldered Fairywrens, John Anthony Jones, Karan J. Odom, Ian R. Hoppe, Doka Nason, Serena Ketaloya, Jordan Karubian Nov 2021

Correlated Evolution Of Distinct Signals Associated With Increased Social Selection In Female White-Shouldered Fairywrens, John Anthony Jones, Karan J. Odom, Ian R. Hoppe, Doka Nason, Serena Ketaloya, Jordan Karubian

School of Natural Resources: Faculty Publications

Conspicuous female signals have recently received substantial scientific attention, but it remains unclear if their evolution is the result of selection acting on females independently of males or if mutual selection facilitates female change. Species that express female, but not male, phenotypic variation among populations represents a useful opportunity to address this knowledge gap. White-shouldered fairywrens (Malurus alboscapulatus) are tropical songbirds with a well-resolved phylogeny where female, but not male, coloration varies allopatrically across subspecies. We explored how four distinct signaling modalities, each putatively associated with increased social selection, are expressed in two populations that vary in competitive pressure on …


Vascular Endothelial Growth Factor A 165 Rescues Steroids, Inflammation And Follicle Arrest In High Androstenedione Cows, Mohamed A. Abedal-Majed, Shelby A. Springman, Courtney M. Sutton, Alexandria P. Snider, Brooke E. Bell, Mariah Hart, Scott G. Kurz, Jeffrey Bergman, Adam F. Summers, Renee M. Mcfee, John S. Davis, Jennifer R. Wood, Andrea S. Cupp Nov 2021

Vascular Endothelial Growth Factor A 165 Rescues Steroids, Inflammation And Follicle Arrest In High Androstenedione Cows, Mohamed A. Abedal-Majed, Shelby A. Springman, Courtney M. Sutton, Alexandria P. Snider, Brooke E. Bell, Mariah Hart, Scott G. Kurz, Jeffrey Bergman, Adam F. Summers, Renee M. Mcfee, John S. Davis, Jennifer R. Wood, Andrea S. Cupp

Department of Animal Science: Faculty Publications

A population of cows with excess androstenedione (A4; High A4) in follicular fluid, with follicular arrest, granulosa cell dysfunction, and a 17% reduction in calving rate was previously identified. We hypothesized that excess A4 in the ovarian microenvironment caused the follicular arrest in High A4 cows and that vascular endothelial growth factor A would rescue the High A4 phenotype. In trial 1, prior to culture, High A4 ovarian cortex (n=9) had greater numbers of early stage follicles (primordial) and fewer later-stage follicles compared to controls (n=11). Culture for 7 days did not relieve this follicular arrest; …


Adaptive Selection Signatures In River Buffalo With Emphasis On Immune And Major Histocompatibility Complex Genes, Yan Ren, Callum Macphillamy, Thu Hien To, Timothy P. L. Smith, John L. Williams, Wai Yee Low Nov 2021

Adaptive Selection Signatures In River Buffalo With Emphasis On Immune And Major Histocompatibility Complex Genes, Yan Ren, Callum Macphillamy, Thu Hien To, Timothy P. L. Smith, John L. Williams, Wai Yee Low

Roman L. Hruska U.S. Meat Animal Research Center: Reports

River buffalo is an agriculturally important species with many traits, such as disease tolerance, which promote its use worldwide. Highly contiguous genome assemblies of the river buffalo, goat, pig, human and two cattle subspecies were aligned to study gene gains and losses and signs of positive selection. The gene families that have changed significantly in river buffalo since divergence from cattle play important roles in protein degradation, the olfactory receptor system, detoxification and the immune system. We used the branch site model in PAML to analyse single-copy orthologs to identify positively selected genes that may be involved in skin differentiation, …


Monitoring Agroecosystem Productivity And Phenology At A National Scale: A Metric Assessment Framework, Dawn M. Browning, Eric S. Russell, Guillermo E. Ponce-Campos, Nicole Kaplan, Andrew D. Richardson, Bijan Seyednasrollah, Sheri Spiegal, Nicanor Saliendra, Joseph G. Alfieri, John Baker, Carl Bernacchi, Brandon T. Bestelmeyer, David Bosch, Elizabeth H. Boughton, Raoul K. Boughton, Pat Clark, Gerald Flerchinger, Nuria Gomez-Casanovas, Sarah Goslee, Nick M. Haddad, David Hoover, Abdullah Jaradat, Marguerite Mauritz, Gregory W. Mccarty, Gretchen R. Miller, John Sadler, Amartya Saha, Russell L. Scott, Andrew Suyker, Craig Tweedie, Jeffrey D. Wood, Xukai Zhang, Shawn D. Taylor Nov 2021

Monitoring Agroecosystem Productivity And Phenology At A National Scale: A Metric Assessment Framework, Dawn M. Browning, Eric S. Russell, Guillermo E. Ponce-Campos, Nicole Kaplan, Andrew D. Richardson, Bijan Seyednasrollah, Sheri Spiegal, Nicanor Saliendra, Joseph G. Alfieri, John Baker, Carl Bernacchi, Brandon T. Bestelmeyer, David Bosch, Elizabeth H. Boughton, Raoul K. Boughton, Pat Clark, Gerald Flerchinger, Nuria Gomez-Casanovas, Sarah Goslee, Nick M. Haddad, David Hoover, Abdullah Jaradat, Marguerite Mauritz, Gregory W. Mccarty, Gretchen R. Miller, John Sadler, Amartya Saha, Russell L. Scott, Andrew Suyker, Craig Tweedie, Jeffrey D. Wood, Xukai Zhang, Shawn D. Taylor

School of Natural Resources: Faculty Publications

Effective measurement of seasonal variations in the timing and amount of production is critical to managing spatially heterogeneous agroecosystems in a changing climate. Although numerous technologies for such measurements are available, their relationships to one another at a continental extent are unknown. Using data collected from across the Long-Term Agroecosystem Research (LTAR) network and other networks, we investigated correlations among key metrics representing primary production, phenology, and carbon fluxes in croplands, grazing lands, and crop-grazing integrated systems across the continental U.S. Metrics we examined included gross primary productivity (GPP) estimated from eddy covariance (EC) towers and modelled from the Landsat …


Center For Grassland Studies, November 2021 Nov 2021

Center For Grassland Studies, November 2021

Center for Grassland Studies: Newsletters

Contents

Ranchers’ Preferences for Payment for Ecosystem Services Programs in Nebraska by Kyle Martens

Center for Grassland Studies Policy Advisory Committee

Director's Column by Walt Schacht (Interim Director)

Fall Army Worms Reared Their Ugly Heads and Wings in Nebraska in 2021by Roch Gaussoin

Dalbey-Halleck Open House by Margo McKendree

Internships – Let’s Get More Students on the Land! by Shelly Kelly

Jim Gerrish Insightful and Relatable for Grazing Livestock (GLS) Club Members


Improving The Child Welfare Workforce Through Training: Common Questions And Evidence-Informed Answers From The Qic-Wd, Quality Improvement Center For Workforce Development Nov 2021

Improving The Child Welfare Workforce Through Training: Common Questions And Evidence-Informed Answers From The Qic-Wd, Quality Improvement Center For Workforce Development

QIC-Tips

Training is often the first intervention child welfare agencies use to address critical workforce development issues. This QIC-Tip aims to answer child welfare agency leaders’ questions about effective training strategies to increase knowledge, enhance skills, and improve job performance. Answers are drawn from the QIC-WD Umbrella Summaries which present a synopsis of the published meta-analyses of specific workforce topics.

What broad-based training approaches can improve employee learning outcomes and job performance?

Coaching uses a structured learning process, over time, to help the learner reach specific goals. Meta-analytic research on the use of professional coaches (not managers or experienced coworkers) …


Evaluating Large Spontaneous Deletions In A Bovine Cell Line Selected For Bovine Viral Diarrhea Virus Resistance, Aspen M. Workman, Michael P. Heaton, Dennis A. Webster, Gregory P. Harhay, Theodore S. Kalbfleisch, Timothy P.L. Smith, Shollie M. Falkenberg, Daniel F. Carlson, Tad S. Sonstegard Nov 2021

Evaluating Large Spontaneous Deletions In A Bovine Cell Line Selected For Bovine Viral Diarrhea Virus Resistance, Aspen M. Workman, Michael P. Heaton, Dennis A. Webster, Gregory P. Harhay, Theodore S. Kalbfleisch, Timothy P.L. Smith, Shollie M. Falkenberg, Daniel F. Carlson, Tad S. Sonstegard

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Bovine viral diarrhea virus’s (BVDV) entry into bovine cells involves attachment of virions to cellular receptors, internalization, and pH-dependent fusion with endosomal membranes. The primary host receptor for BVDV is CD46; however, the complete set of host factors required for virus entry is unknown. The Madin-Darby bovine kidney (MDBK) cell line is susceptible to BVDV infection, while a derivative cell line (CRIB) is resistant at the level of virus entry. We performed complete genome sequencing of each to identify genomic variation underlying the resistant phenotype with the aim of identifying host factors essential for BVDV entry. Three large compound deletions …


Nebline, Nov./Dec.2021 Nov 2021

Nebline, Nov./Dec.2021

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Holiday Food Tips

Recipes of the Month

Traditions Rituals and Routines During a COVID-19 Holiday Season

Wise Use of Private Water and Wastewater Systems Can Make the Holidays More Peaceful

Dormant Lawn Seeding

Garden Guide: Things to Do This Month

4-H Thanks 2021 Sponsors

Farmland Trends and Lease Considerations for 2022 Workshop

Upcoming Early Childhood Trainings

Ag Society Annual Election & Meeting

Heart of 4-H Volunteer Award, Jamie Wood

Heart of 4-H Volunteer Award, Julia Plugge

Slime, Jelly Worms & Goo: Food Science 4-H Workshop, Dec. 4

Finger Knit 4-H Workshop, Dec. 11

2021 4-H Horse Awards Night

4-H Announcements …


The Sulfur Microbial Diet Is Associated With Increased Risk Of Early-Onset Colorectal Cancer Precursors, Long H. Nguyen, Yin Cao, Jinhee Hur, Raaj S. Mehta, Daniel R. Sikavi, Yiqing Wang, Wenjie Ma, Kana Wu, Mingyang Song, Edward L. Giovannucci, Eric B. Rimm, Walter C. Willett, Wendy S. Garrett, Jacques Izard, Curtis Huttenhower, Andrew T. Chan Nov 2021

The Sulfur Microbial Diet Is Associated With Increased Risk Of Early-Onset Colorectal Cancer Precursors, Long H. Nguyen, Yin Cao, Jinhee Hur, Raaj S. Mehta, Daniel R. Sikavi, Yiqing Wang, Wenjie Ma, Kana Wu, Mingyang Song, Edward L. Giovannucci, Eric B. Rimm, Walter C. Willett, Wendy S. Garrett, Jacques Izard, Curtis Huttenhower, Andrew T. Chan

Food for Health: Publications

Background and aims: Diet may contribute to the increasing incidence of colorectal cancer (CRC) before age 50 (early-onset CRC). Microbial metabolism of dietary sulfur produces hydrogen sulfide (H2S), a gastrointestinal carcinogen that cannot be easily measured at scale. As a result, evidence supporting its role in early neoplasia is lacking.

Methods: We evaluated long-term adherence to the sulfur microbial diet, a dietary index defined a priori based on increased abundance of 43 bacterial species involved with sulfur metabolism, with risk of CRC precursors among 59,013 individuals who underwent lower endoscopy in the Nurses’ Health Study II …


Subspecific Designation Of The U.S.A. Interior Highlands Population Of Argynnis (Speyeria) Diana (Cramer, 1777) (Nymphalidae: Heliconiinae: Argynnini: Argynnina), Harry Pavulaan Nov 2021

Subspecific Designation Of The U.S.A. Interior Highlands Population Of Argynnis (Speyeria) Diana (Cramer, 1777) (Nymphalidae: Heliconiinae: Argynnini: Argynnina), Harry Pavulaan

The Taxonomic Report of the International Lepidoptera Survey

Subspecific designation is designated for the North American Interior Highlands population of Argynnis diana, based on four factors: mtDNA haplotype differences from nominotypical A. diana of the Appalachian Mountains; wing shape difference in the males between both regions; wing size of the adults; and tendency for females of the Interior Highlands to show tan coloration in the submarginal row of rectangular spots of the subapical region of the dorsal forewings.


The U.S. Inland Creel And Angler Survey Catalog (Creelcat): Development, Applications, And Opportunities, Abigail J. Lynch, Nicholas A. Sievert, Holly S. Embke, Ashley M. Robertson, Bonnie J.E. Myers, Micheal S. Allen, Zachary S. Feiner, Frederick Hoogakker, Scott Knoche, Rebecca M. Krogman, Stephen R. Midway, Chelsey L. Nieman, Craig P. Paukert, Kevin L. Pope, Mark W. Rogers, Lyndsie S. Wszola, T. Douglas Beard Nov 2021

The U.S. Inland Creel And Angler Survey Catalog (Creelcat): Development, Applications, And Opportunities, Abigail J. Lynch, Nicholas A. Sievert, Holly S. Embke, Ashley M. Robertson, Bonnie J.E. Myers, Micheal S. Allen, Zachary S. Feiner, Frederick Hoogakker, Scott Knoche, Rebecca M. Krogman, Stephen R. Midway, Chelsey L. Nieman, Craig P. Paukert, Kevin L. Pope, Mark W. Rogers, Lyndsie S. Wszola, T. Douglas Beard

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Inland recreational fishing, defined as primarily leisure-driven fishing in freshwaters, is a popular pastime in the USA. State natural resource agencies endeavor to provide high-quality and sustainable fishing opportunities for anglers. Managers often use creel and other angler survey data to inform state- and waterbody-level management efforts. Despite the broad implementation of angler surveys and their importance to fisheries management at state scales, regional and national coordination among these activities is minimal, limiting data applicability for larger-scale management practices and research. Here, we introduce the U.S. Inland Creel and Angler Survey Catalog (CreelCat), a first-of-its-kind, publicly available national database of …


Empowering Salieri - Extracting The Genius In Our Students, Zachary C. Schafer, Lawrence C. Scharmann Nov 2021

Empowering Salieri - Extracting The Genius In Our Students, Zachary C. Schafer, Lawrence C. Scharmann

Department of Teaching, Learning, and Teacher Education: Faculty Publications

Aesthetic Based Alternative Assessment (ABAA) is a type of project-based learning that extends beyond science content and places students’ interests at the forefront of the learning environment. ABAA is consistent with a holistic approach to science teaching and learning long advocated by former NSTA President Hans O. Andersen (1989–1990), in which students’ interests serve as the departure to more intensive involvement with the subject.


Dietary Fiber Utilization In The Gut: The Role Of Human Gut Microbes In The Degradation And Consumption Of Xylose-Based Carbohydrates, Elizabeth Drey Nov 2021

Dietary Fiber Utilization In The Gut: The Role Of Human Gut Microbes In The Degradation And Consumption Of Xylose-Based Carbohydrates, Elizabeth Drey

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Xylans are a family of xylose-based polysaccharides naturally present in fruits, vegetables, and cereal grains. Resistant to digestion by host enzymes, xylans reach the large intestine intact, where they are utilized by members of the gut microbiome. They are initially hydrolyzed by primary degraders that utilize extracellular xylanases to cleave xylan into smaller oligomers. These xylooligosaccharides (XOS) can then either be further hydrolyzed by primary degraders or can cross-feed secondary consumers, including Bifidobacterium. While several Bifidobacterium species have metabolic systems for XOS, studies have shown these species grow poorly on longer XOS and xylan substrates. In this thesis, …


Cognitive Effects Of Alcohol Use And Sleep Disruption In College Students, Taylor English Nov 2021

Cognitive Effects Of Alcohol Use And Sleep Disruption In College Students, Taylor English

Department of Psychology: Dissertations, Theses, and Student Research

Alcohol use and sleep disruption are highly prevalent amongst college students, yet their combined effects on cognitive functioning and subsequent classroom performance have not been fully examined. Alcohol use has been shown to negatively impact cognitive functioning, especially in college students without fully matured brain regions. This has led to decreases in academic functioning and increases in college dropout. Disruptions in sleep functioning can lead to both lapses in attention and an overall decrease in attention, which can negatively impact learning in a classroom environment.

Participants were 96 undergraduate students who were invited to participate based on responses from a …


Moraxella Species Associated With Infectious Bovine Keratoconjunctivitis: Detection, Characterization, And Immunity, Matthew M. Hille Nov 2021

Moraxella Species Associated With Infectious Bovine Keratoconjunctivitis: Detection, Characterization, And Immunity, Matthew M. Hille

School of Veterinary and Biomedical Sciences: Dissertations, Theses, and Student Research

Infectious bovine keratoconjunctivitis (IBK) represents the most common ocular disease of cattle. Moraxella bovis (M. bovis) is the only bacteria proven to cause IBK under experimental conditions. A closely related bacteria, Moraxella bovoculi (M. bovoculi) is cultured from IBK lesions more frequently than M. bovis, and is suspected to cause IBK, although a causal relationship between M. bovoculi and IBK has not been confirmed experimentally. Two distinct genotypes were recently characterized in M. bovoculi based on whole genome sequencing. Genotype 1 M. bovoculi appears to represent a potential pathogen …


Fingerlings Mass Estimation: A Comparison Between Deep And Shallow Learning Algorithms, Adair Da Silva Oliveira Junior, Diego André Sant’Ana, Marcio Carneiro Brito Pache, Vanir Garcia, Vanessa Aparecida De Moares Weber, Gilberto Astolfi, Fabricio De Lima Weber, Geazy Vilharva Menezes, Gabriel Kirsten Menezes, Pedro Lucas França Albuquerque, Celso Soares Costa, Eduardo Quirino Arguelho De Queiroz, João Victor Araújo Rozales, Milena Wolff Ferreira, Marco Hiroshi Naka, Hemerson Pistori Nov 2021

Fingerlings Mass Estimation: A Comparison Between Deep And Shallow Learning Algorithms, Adair Da Silva Oliveira Junior, Diego André Sant’Ana, Marcio Carneiro Brito Pache, Vanir Garcia, Vanessa Aparecida De Moares Weber, Gilberto Astolfi, Fabricio De Lima Weber, Geazy Vilharva Menezes, Gabriel Kirsten Menezes, Pedro Lucas França Albuquerque, Celso Soares Costa, Eduardo Quirino Arguelho De Queiroz, João Victor Araújo Rozales, Milena Wolff Ferreira, Marco Hiroshi Naka, Hemerson Pistori

School of Computing: Faculty Publications

The paper presents some results regarding the automatic mass estimation of Pintado Real fingerlings, using machine learning techniques to support the fish production process. For this purpose, an image dataset called FISHCV1206FSEG, was created which is composed of 1206 images of fingerlings with their respective annotated masses. Through the fish contours, the area and perimeter were extracted, and submitted to the J48, SVM, and KNN classification algorithms and a linear regression algorithm. The images were also submitted to ResNet50, In- ceptionV3, Exception, VGG16, and VGG19 convolutional neural networks. As a result, the classification algorithm J48 reached an accuracy of 58.2% …


Rooting Out Genetic Structure Of Invasive Wild Pigs In Texas, Anna M. Mangan, Antoinette J. Piaggio, Michael J. Bodenchuk, Courtney F. Pierce, Timothy J. Smyser Nov 2021

Rooting Out Genetic Structure Of Invasive Wild Pigs In Texas, Anna M. Mangan, Antoinette J. Piaggio, Michael J. Bodenchuk, Courtney F. Pierce, Timothy J. Smyser

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive wild pigs (Sus scrofa), also called feral swine or wild hogs, are recognized as among the most destructive invasive species in the world. Throughout the United States, invasive wild pigs have expanded rapidly over the past 40 years with populations now established in 38 states. Of the estimated 6.9 million wild pigs distributed throughout the United States, Texas supports approximately 40% of the population and similarly bears disproportionate ecological and economic costs. Genetic analyses are an effective tool for understanding invasion pathways and tracking dispersal of invasive species such as wild pigs and have been used recently …


Wildlife Responses To Livestock Guard Dogs And Domestic Sheep On Open Range, Daniel Kinka, Jeffrey T. Schultz, Julie K. Young Nov 2021

Wildlife Responses To Livestock Guard Dogs And Domestic Sheep On Open Range, Daniel Kinka, Jeffrey T. Schultz, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Domestic sheep (Ovis aries) are an attractant to carnivores; however, sheep are often accompanied by humans and livestock guardian dogs (LGDs; Canis familiaris), which defend sheep from depredation. Sheep also compete directly with wildlife for grazing resources. Although practiced for millennia in much of the world outside North America, the effect that transhumance has on wildlife is poorly understood. To test the effect of sheep bands (sheep, humans, and LGDs) on wildlife, we modeled the detection probability of wild mammals relative to the presence of sheep bands in the Northwestern United States. Sheep band presence was associated …


Mongooses (Urva Auropunctata) As Reservoir Hosts Of Leptospira Species In The United States Virgin Islands, 2019–2020, Hannah M. Cranford, A. Springer Browne, Karen Lecount, Tammy Anderson, Camila Hamond, Linda Schlater, Tod Stuber, Valicia J. Burke-France, Marissa Taylor, Cosme J. Harrison, Katia Y. Matias, Alexandra Medley, John Rossow, Nicholas Wiese, Leanne Jankelunas, Leah De Wilde, Michelle Mehalick, Gerard L. Blanchard, Keith R. Garcia, Alan S. Mckinley, Claudia D. Lombard, Nicole F. Angeli, David Horner, Thomas Kelley, David J. Worthington, Jennifer Valiulis, Bethany Bradford, Are Berentsen, Johanna S. Salzer, Renee Galloway, Ilana J. Schafer, Kristine Bisgard, Joseph Roth, Brett R. Ellis, Esther M. Ellis, Jarlath E. Nally Nov 2021

Mongooses (Urva Auropunctata) As Reservoir Hosts Of Leptospira Species In The United States Virgin Islands, 2019–2020, Hannah M. Cranford, A. Springer Browne, Karen Lecount, Tammy Anderson, Camila Hamond, Linda Schlater, Tod Stuber, Valicia J. Burke-France, Marissa Taylor, Cosme J. Harrison, Katia Y. Matias, Alexandra Medley, John Rossow, Nicholas Wiese, Leanne Jankelunas, Leah De Wilde, Michelle Mehalick, Gerard L. Blanchard, Keith R. Garcia, Alan S. Mckinley, Claudia D. Lombard, Nicole F. Angeli, David Horner, Thomas Kelley, David J. Worthington, Jennifer Valiulis, Bethany Bradford, Are Berentsen, Johanna S. Salzer, Renee Galloway, Ilana J. Schafer, Kristine Bisgard, Joseph Roth, Brett R. Ellis, Esther M. Ellis, Jarlath E. Nally

United States Department of Agriculture Wildlife Services: Staff Publications

During 2019–2020, the Virgin Islands Department of Health investigated potential animal reservoirs of Leptospira spp., the bacteria that cause leptospirosis. In this cross-sectional study, we investigated Leptospira spp. exposure and carriage in the small Indian mongoose (Urva auropunctata, syn: Herpestes auropunctatus), an invasive animal species. This study was conducted across the three main islands of the U.S. Virgin Islands (USVI), which are St. Croix, St. Thomas, and St. John. We used the microscopic agglutination test (MAT), fluorescent antibody test (FAT), real-time polymerase chain reaction (lipl32 rt-PCR), and bacterial culture to evaluate serum and kidney specimens and compared the …


Strategies For Highlighting Items Within Visual Scene Displays To Support Augmentative And Alternative Communication Access For Those With Physical Impairments, Kevin Pitt, John W. Mccarthy Nov 2021

Strategies For Highlighting Items Within Visual Scene Displays To Support Augmentative And Alternative Communication Access For Those With Physical Impairments, Kevin Pitt, John W. Mccarthy

Department of Special Education and Communication Disorders: Faculty Publications

Purpose: In contrast to the traditional grid-based display, visual scene displays (VSDs) offer a new paradigm for aided communication. For individuals who cannot select items from an AAC display by direct selection due to physical impairments, AAC access can be supported via methods such as item scanning. Item scanning sequentially highlights items on a display until the individual signals for selection. How items are highlighted or scanned for AAC access can impact performance outcomes. Further, the effectiveness of a VSD interface may be enhanced through consultation with experts in visual communication. Therefore, to support AAC access for those with physical …


Qupath Digital Immunohistochemical Analysis Of Placental Tissue, Ashley L. Hein, Maheswari Mukherjee, Geoffrey A. Talmon, Sathish Kumar Natarajan, Tara M. Nordgren, Elizabeth Lyden, Corrine K. Hanson, Jesse L. Cox, Annelisse Santiago‑Pintado, Mariam A. Molani, Matthew Van Ormer, Maranda Thompson, Melissa K. Thoene, Aunum Akhter, Ann Anderson‑Berry, Ana G. Yuil-Valdes Nov 2021

Qupath Digital Immunohistochemical Analysis Of Placental Tissue, Ashley L. Hein, Maheswari Mukherjee, Geoffrey A. Talmon, Sathish Kumar Natarajan, Tara M. Nordgren, Elizabeth Lyden, Corrine K. Hanson, Jesse L. Cox, Annelisse Santiago‑Pintado, Mariam A. Molani, Matthew Van Ormer, Maranda Thompson, Melissa K. Thoene, Aunum Akhter, Ann Anderson‑Berry, Ana G. Yuil-Valdes

Department of Nutrition and Health Sciences: Faculty Publications

Background: QuPath is an open‑source digital image analyzer notable for its user‑friendly design, cross‑platform compatibility, and customizable functionality. Since it was first released in 2016, at least 624 publications have reported its use, and it has been applied in a wide spectrum of settings. However, there are currently limited reports of its use in placental tissue. Here, we present the use of QuPath to quantify staining of G‑protein coupled receptor 18 (GPR18), the receptor for the pro‑resolving lipid mediator Resolvin D2, in placental tissue. Methods: Whole slide images of vascular smooth muscle (VSM) and extravillous trophoblast (EVT) cells stained …


The Effects Of Omega-3 Pufa Infusions During Late Gestation On Developmental Pathologies In The Intrauterine Growth Restricted Fetus, Taylor A. Lacey Nov 2021

The Effects Of Omega-3 Pufa Infusions During Late Gestation On Developmental Pathologies In The Intrauterine Growth Restricted Fetus, Taylor A. Lacey

Department of Animal Science: Dissertations, Theses, and Student Research

Low birthweight due to intrauterine growth restriction is associated with metabolic disorders after birth. Our 1st study assessed deficits in skeletal muscle glucose metabolism and pancreatic β cell function in IUGR fetal sheep. We aimed to evaluate the effectiveness of daily intravenous infusions of the anti-inflammatory ω-3 polyunsaturated fatty acid (PUFA), eicosapentaenoic acid (EPA), as a means of improving deficits previously observed in the IUGR fetus by targeting fetal systemic inflammation. The presence of systemic inflammation in IUGR fetuses was evident by increased total circulating populations of total leukocytes, lymphocytes, and monocytes. However, these were …


Two New Species Of Hermeuptychia From North America And Three Neotype Designations (Nymphalidae: Satyrinae), Qian Cong, Eduardo P. Barbosa, Mario A. Marín, André V. L. Freitas, Gerardo Lamas, Nick V. Grishin Oct 2021

Two New Species Of Hermeuptychia From North America And Three Neotype Designations (Nymphalidae: Satyrinae), Qian Cong, Eduardo P. Barbosa, Mario A. Marín, André V. L. Freitas, Gerardo Lamas, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

Abstract

Two new species of Hermeuptychia Forster, 1964 are described. Hermeuptychia sinuosa Grishin, sp. n. (type locality Guatemala: El Progreso, Morazán) is an isolated member of the genus that does not readily fit into known species groups, as suggested by its distinct male and female genitalia and COI DNA barcode sequences. It is distinguished from its congeners by prominently wavy submarginal lines, rounder wings and distinctive genitalia, and can typically be identified by a white dot, instead of an eyespot, near the ventral hindwing apex. Hermeuptychia occidentalis Grishin, sp. n. (type locality Mexico: Guerrero, Acapulco) belongs to the Hermeuptychia sosybius …


Flock-Species Richness Influences Node Importance And Modularity In Mixed-Species Flock Networks, Priti Bangal, Hari Sridhar, Daizaburo Shizuka, Laura N. Vander Meiden, Kartik Shankar Oct 2021

Flock-Species Richness Influences Node Importance And Modularity In Mixed-Species Flock Networks, Priti Bangal, Hari Sridhar, Daizaburo Shizuka, Laura N. Vander Meiden, Kartik Shankar

Papers in Behavior in Biological Sciences

Interdependencies in social groups of animals are a combination of multiple pairwise interactions. Heterospecific groups are often characterized by important species that contribute more to group initiation, maintenance or function than other species. However, in large heterospecific groups, many pairwise interactions are not realised, while others may not be biologically significant, confounding inferences about species importance. Hence, in this study, we examine context dependent changes in species importance and assortment in mixed-species bird flocks from a tropical field site in Southern India using social network analysis. Specifically, we ask how the structural importance of a species and the clustering patterns …


Self-Explanation In Training, Megan Paul Oct 2021

Self-Explanation In Training, Megan Paul

Umbrella Summaries

What is self-explanation?

Self-explanation is “a process by which learners generate inferences about causal connections or conceptual relationships” (Bisra et al., 2018). It involves pausing to think more deeply about instructional content, to better connect it with prior knowledge or to check for understanding. Self-explanations can be prompted (through specific instructions or questions) or unprompted (done spontaneously by a learner). Prompts can include instructions to explain, open-ended questions, or closed-ended questions such as multiple choice (Bisra et al., 2018). There is no one type of self-explanation. Examples include providing rationale for a decision or belief and explaining a concept, process, …


Decoding The Equine Genome: Lessons From Encode, Sichong Peng, Jessica L. Petersen, Rebecca R. Bellone, Ted Kalbfleisch, N. B. Kingsley, Alexa Barber, Eleonora Cappelletti, Elena Giulotto, Carrie J. Finno Oct 2021

Decoding The Equine Genome: Lessons From Encode, Sichong Peng, Jessica L. Petersen, Rebecca R. Bellone, Ted Kalbfleisch, N. B. Kingsley, Alexa Barber, Eleonora Cappelletti, Elena Giulotto, Carrie J. Finno

Department of Animal Science: Faculty Publications

The horse reference genome assemblies, EquCab2.0 and EquCab3.0, have enabled great advancements in the equine genomics field, from tools to novel discoveries. However, significant gaps of knowledge regarding genome function remain, hindering the study of complex traits in horses. In an effort to address these gaps and with inspiration from the Encyclopedia of DNA Elements (ENCODE) project, the equine Functional Annotation of Animal Genome (FAANG) initiative was proposed to bridge the gap between genome and gene expression, providing further insights into functional regulation within the horse genome. Three years after launching the initiative, the equine FAANG group has generated data …


Expedited Pcr With Stirring, Hendrik J. Viljoen Oct 2021

Expedited Pcr With Stirring, Hendrik J. Viljoen

Department of Chemical and Biomolecular Engineering: Faculty Publications

Disclosed are an apparatus and methods for rapid amplifi cation of nucleic acids . More particularly , the present dis closure relates to an apparatus for mixing a reaction solution during amplification of nucleic acids and to methods for amplifying nucleic acids . Also disclosed are methods for lysing cells in a sample and amplifying nucleic acids .


Expedited Pcr With Stirring, Hendrik Viljoen Oct 2021

Expedited Pcr With Stirring, Hendrik Viljoen

Department of Chemical and Biomolecular Engineering: Faculty Publications

Disclosed are an apparatus and methods for rapid amplification of nucleic acids. More particularly, the present dis closure relates to an apparatus for mixing a reaction solution during amplification of nucleic acids and to methods for amplifying nucleic acids. Also disclosed are methods for lysing cells in a sample and amplifying nucleic acids.