Digital Commons Network^™

Dna Half-Adder Based Calculator Driven By 4j Molecular Switches, Andrea Gissele Canizalez Covaleda

Honors Undergraduate Theses

DNA nanostructures have computing functions due to the predictable base pairing of nucleic acids (Watson–Crick). This property allows the programming of DNA circuits that integrate DNA logic gates capable of recognizing oligonucleotides. This molecular device offers the advantages of biocompatibility and potential applications in personalized medicine for diagnosis and therapies.

Our lab has developed DNA logic gates formed by the connection of YES strands via DNA four-way junctions (4J), which can function as molecular switches to develop a DNA-based calculator. Our DNA half-adder calculator nanostructure is designed to recognize up to three combinations of DNA inputs using three DNA strands …

Designing Rhetorical Education For Online Audiences, Nicholas Dixon

Honors Undergraduate Theses

This project demonstrates a multimodal education for online audiences through the creation of a YouTube video, What is Rhetoric?   The literature from composition, education, and media asserts that online multimodal media is useful for idea production, civic discussion, and learning. This project follows the idea that online multimodal digital media are valuable forms for meeting audiences with access to rhetorical knowledge, both within academic institutions and in the education of public audiences. In Confronting the Challenges of Participatory Culture, Henry Jenkins highlights the challenge online participants face in recognizing the ways media shapes perceptions of the world (xii). Rhetoric is …

Evaluating The Comparison Of Different Body Locations For Data Collection Using Galvanic Skin Response Of Forensic Chemistry Students When In Lecture And Laboratory Environments, Elisa Guerrero

Honors Undergraduate Theses

Anxiety is the response that humans can have when exposed to a stimulus. It can be caused by a multitude of factors, such as psychological, biological, or physiological stimuli. Anxiety can be presented as a state or as a trait in a person. Trait anxiety is typically seen as a more stable personality trait, whereas state anxiety is a more intense temporary emotional state. In our study, anxiety was regarded as a more state-like characteristic. A galvanic skin response (GSR) Shimmer3+ device can measure skin electro-conductance changes following stimulation. In a situation where a participant is experiencing anxiety, levels of …

Mycoethics: Reverence For Life In Light Of Modern Science, Charis E. Meyers

Honors Undergraduate Theses

There is a 21^st century wave of passion surrounding fungi and mycology, and it’s becoming louder and louder. The mycoenthusiasts themselves have a uniquely inspired ethical system born out of their science, and my aim is to both formally introduce their position, including many unspoken foundations, and defend its potential. I call this position mycoethics and attempt to collect it from the scattered tidbits in mycological media. I first identify its historical precedent, then spend a length of time establishing where its sense of goodness comes from, postulating it as a utilitarian offspring of Albert Schweitzer’s reverence for life. …

Generative Ai Peer Tutoring To Support Peer-Reviewed Source Identification And Evaluation, Rae Mair, Michelle Kelley, Taylar Wenzel, Andrea C. Borowczak, Yuqing Li, Mike Borowczak

Faculty Scholarship and Creative Works

This chapter explores the design and evaluation of a generative artificial intelligence peer tutor prompt to support college students in identifying and evaluating peer-reviewed sources for academic research. Grounded in literature on peer tutoring, Socratic dialogue, and AI-supported learning, the authors describe an iterative prompt engineering process designed to transform large language models (LLMs) into Socratic-style peer tutors capable of scaffolding student reasoning without completing tasks for them. Five guiding criteria for an effective peer tutor shaped development and evaluation: cognitive congruence, step-by-step guidance, avoiding giving answers, adaptability to student level, metacognitive transparency, and following assignment directions. Across multiple human-centered …

Beyond The Square Pulse: Waveform Shape, Eeg Correlates, And The Pursuit Of Natural Sensation In Tens, Jason Whitson

Honors Undergraduate Theses

This study investigates the relationship between electrical stimulus characteristics of shape and charge on evoked sensations and electroencephalogram (EEG) data during multi-waveform transcutaneous electrical nerve stimulation (TENS) of the median nerve. Neuromodulation methods have traditionally had little control over the location and quality of their associated evoked sensation (e.g., electric, vibration, touch). This experiment utilized five unique stimulus waveforms during TENS stimulation. EEG data were collected concurrently to provide an introductory objective measure of the neural responses underlying these sensory changes. Eleven participants completed three tasks (thresholding, super-threshold stimulation, two-alternative forced choice) using a two-electrode TENS approach. Stimulus waveforms were …

From Ship To Shore: The Impact Of Sailor Resistance On The Anti-Vietnam War Movement, Trent Chamberlain

Honors Undergraduate Theses

This thesis explores the often-overlooked role of United States Navy personnel in the broader anti-Vietnam War movement. While civilian protests dominate historical narratives of the era, the impact of active-duty sailor resistance remains underexplored. To address this gap, this thesis examines shipboard and shore-based dissent to determine how Naval resistance influenced both military operations and domestic anti-war efforts. By conducting a historical analysis of primary source materials, including military records, underground press publications, and personal accounts, this research traces the evolution of sailor organizing and its intersections with civilian peace movements. The thesis shows that Naval dissent not only posed …

Artificial Intelligence In Cybersecurity: Applications, Threats, And Implications, Brandon A. Rodriguez

Honors Undergraduate Theses

The point of this thesis is to analyze the growth of artificial intelligence in the world of cyber security, highlighting the specific impacts it has in the use of defense and offensive misuse. The way that this research was done was by using three main methods, those being interviewing cybersecurity specialists, testing the uses of public AI models and by reviewing peer-reviewed studies. Some of the findings that were discovered with the research were that AI can be a great asset in supporting defensive systems with such things as assisting in the creation of scripts, but there are also negatives …

A Chicken Model For Non-Invasive Diagnosis Of Infant Developmental Dysplasia Of The Hip (Ddh) Using Acoustic Transmission Measurements, Aliza Shah

Honors Undergraduate Theses

Developmental dysplasia of the hip (DDH) is a condition characterized by abnormal development and stability of the hip joint. In a healthy infant, the femoral head (ball) fits securely within the acetabulum (socket of the pelvis), allowing for proper joint function. In DDH, the relationship is disrupted, ranging from mild acetabular dysplasia to partial (subluxation) or complete dislocation of the femoral head. This condition represents a range of structural abnormalities that develop during early growth. The integrity of the hip joint is essential for physical mobility, and disruption of this structure can lead to significant functional impairment. DDH may result …

Evaluation Of Electroencephalography Processing Methods For Estimating Metabolic Energy Expenditure During Walking, Stephanie L. Pinelo

Graduate Studies Theses and Dissertations 2026

In this study, three EEG datasets, created via different levels of pre-processing, were used to train VO2 prediction models whose performance was tested and compared. Understanding the link between EEG and VO2 during walking is important when working in rehabilitation or studying metabolic energy optimization. Common methods of measuring these two bio-signals tend to be bulky, uncomfortable, and inefficient, so finding a way to predict VO2 from EEG via 1D CNN model training is a worthy pursuit.  It was hypothesized that, due to a CNN needing more data to find patterns for prediction, a minimally processed EEG dataset would have …

From Designation To Implementation: A Qualitative Study Of Support Structures For Latinx Students At A Hispanic-Serving Institution, Steven A. Freeman

Graduate Studies Theses and Dissertations 2026

This study addresses the persistent misalignment between the enrollment-based designation of Hispanic-Serving Institutions (HSIs) and the extent to which these institutions implement intentional practices that support Latinx student success. As HSIs continue to grow nationally, it is critical to examine whether institutional efforts move beyond symbolic designation toward meaningful “servingness,” particularly given the increasing reliance on these institutions to advance social mobility and educational attainment for Latinx students. The purpose of this qualitative study is to explore the support structures an HSI provides to promote Latinx student success and to examine Latinx students’ perceptions of the effectiveness of these supports. …

Advances In Active And Passive Integrated Photonic Devices On Thin-Film Lithium Niobate, Pooja S. Kulkarni

Graduate Studies Theses and Dissertations 2026

Thin-film lithium niobate (TFLN) has emerged as a powerful platform for integrated photonics, combining the exceptional electro-optic, nonlinear, and optical properties of bulk lithium niobate with the scalability and compactness of planar nanophotonic technologies. Building on these principles, advanced device architectures such as adiabatic dichroic filters have demonstrated exceptional spectral performance spanning over two octaves of bandwidth on the TFLN platform. Beyond reciprocal devices, it also offers promising pathways toward integrated nonreciprocal components. By leveraging broadband filtering structures and advanced nonlinear photonic design strategies, compact and monolithic optical isolators can be envisioned without relying on traditional magneto-optic materials. In the …

Photogrammetry: Accuracy And Precision Analysis Of Color And Rim Diameter Utilizing Various Cameras, Christina Threlkeld

High Impact Practices Student Showcase Spring 2026

The goal of this paper is to test whether photogrammetry is a viable/affordable way to generate 3-D data sets suitable for research applications. Utilizing a sample of 10 ceramic rim sherds randomly selected out of 40 viable rim samples from the Rio Verde assemblage, I will generate 3-D models for 3 different technologies. From there I will test measurements by calculating rim diameters and consistency of color through Munsell readings The data collected will help determine what type of data can be extracted from 3-D renderings. In order to ensure accuracy, rim sherd diameter and Munsell data will be directly …

Women In Industrial Engineering Leadership And Barriers To Advancement, Fiorella Barney

High Impact Practices Student Showcase Spring 2026

This research investigates how organizational and cultural barriers influence the advancement of women into leadership positions within industrial engineering. Despite being one of the more gender-balanced engineering disciplines at the entry level, industrial engineering remains largely male-dominated in leadership, and this project set out to understand why that gap persists and what sustains it.

To explore this question, I conducted a review of seven peer-reviewed sources organized around five themes: the scope of underrepresentation, organizational barriers, gendered workplace culture, early career pipeline effects, and attrition. I then conducted a qualitative, semi-structured interview with a woman who began her career as …

Infrared Systems And Their Application On Target Detection And Geolocation, Li Zhang

Graduate Studies Theses and Dissertations 2026

The infrared spectrum contains various sub-bands (from near infrared (NIR) to long-wave infrared (LWIR), which are specialized at different detection tasks. Objects that are well camouflaged to human vision can be highly noticeable in NIR imagery. For vision navigation, the varying illumination condition and the cluttered urban background poses challenges in the visible band but can easily be resolved by using a thermal imager operating in LWIR. Despite this potential, practical deployment remains limited by the lack of suitable platforms, task-specific datasets, and long-duration field validation. This dissertation addresses these gaps through the design and evaluation of two infrared sensing …

Pseudo-Boiling Of Supercritical Co2 In A Parallel-Flow Microchannel And A Micro-Jets Impingement Device And Single-Phase And Two-Phase Heat Transfer Of Subcritical Co2 Jets, Pranzal Ahmed

Graduate Studies Theses and Dissertations 2026

Carbon dioxide (CO2) is gaining attention as a low-toxicity, zero-ozone-depletion refrigerant with a global warming potential of 1, making it an attractive alternative to synthetic HFCs/HFOs. Near its critical point, CO2's thermophysical properties change sharply with small shifts in temperature and pressure — a behavior that can be exploited to enhance heat transfer in trans-critical power cycles and electronics cooling. This dissertation experimentally investigates heat transfer during the pseudo-boiling of supercritical CO2 in a parallel-flow microchannel and a micro-jet impingement device, alongside CO2 flow boiling and single-phase water heat transfer in micro-jet impingement. Using microfluidic devices instrumented with embedded resistance …

Bowtie Antenna-Coupled Bi₂Te₃–Sb₂Te₃ Thermoelectric Detector For Millimeter-Wave Radiation, Rumana Zahir

Graduate Studies Theses and Dissertations 2026

We explore the development of antenna-coupled thermoelectric detectors for long-wavelength radiation using sputtered bismuth telluride (Bi₂Te₃) and antimony telluride (Sb₂Te₃) thin films. Detection in the infrared, millimeter-wave, and terahertz regimes is critical for sensing, imaging, and energy applications; however, many existing detectors rely on cryogenic operation, exhibit narrow spectral response, or require complex material systems. In this work, we investigate the feasibility of reliable, room-temperature long-wavelength detection using microfabricated thermoelectric thin films integrated with antenna structures. A systematic full-factorial experimental approach was employed to determine how sputtering parameters and post-deposition annealing influence …

Photothermal Excitation And Optical Interferometric Readout Of Mos2 Nanomechanical Resonators, Sadia Afrin

Graduate Studies Theses and Dissertations 2026

Two-dimensional (2D) materials have emerged as promising candidates for nanoelectromechanical systems (NEMS) due to their exceptional mechanical, optical, and electrical properties. Among these materials, molybdenum disulfide (MoS2) has attracted considerable interest for nanomechanical resonator applications because of its low mass density, high mechanical strength, and semiconducting nature. This thesis presents the fabrication, theoretical modeling, and experimental characterization of suspended MoS2 drumhead resonators. The devices were fabricated by mechanically exfoliating MoS2 flakes from bulk MoS2 crystals and transferring selected flakes onto pre-patterned substrates using a dry-transfer process. Mechanical resonance was excited through photothermal actuation using a modulated blue laser, while device …

Soil Texture And Organic Matter Influence Hydraulic Performance Of Stormwater Infiltration Systems Across Antecedent Moisture Conditions, Laura E. Andrade Barron

Graduate Studies Theses and Dissertations 2026

Stormwater infiltration systems are widely used to improve urban stormwater management by promoting drainage and groundwater recharge while treating nonpoint source pollution such as nutrients in surface runoff. Nutrient removal and hydrologic performance of these systems are closely coupled and both are dependent on characteristics of underlying soils. In this study, laboratory flow-through experiments were conducted using 30 intact cores taken from six soil types with different textures (0.99-16.63% clay content) and organic matter contents (OMC 0.44-93.3%). Measured cumulative fluxes from laboratory experiments were used to calibrate numerical models simulating flow through porous media (HYDRUS-1D). Calibrated models were used to …

Charge Transport Modeling Of Multifunctional Molecular Transistors, Romena Akter

Graduate Studies Theses and Dissertations 2026

Distinguishing between the current–voltage characteristic curves associated with different transport mechanisms in a molecular electronic device and an artifact arising from device-level disorder is a central challenge in the study of molecular electronics. Characterizing these mechanisms and connecting them qualitatively to molecular-level orbital alignment, electrode coupling, voltage division, energetic disorder, and reorganization energy requires not only experimental data but also a rigorous theoretical framework for extracting physically meaningful parameters from measured transfer characteristics. This dissertation addresses this challenge in Chapters 2, 3, and 4 by developing and applying four complementary transport models —Simmons tunneling, single-level Landauer, Marcus hopping, and McConnell …

Numerical Investigation Of Reacting Flow In Pmma-Fueled Solid Fuel Scramjet Combustors Under Experimental Test Conditions, Hunter Bassett

Graduate Studies Theses and Dissertations 2026

A simplified steady RANS-based numerical study of reacting flow in solid-fuel scramjet combustors is presented to evaluate the ability of commercial CFD frameworks to reproduce key features observed in experimental test sections. The work focuses on solid PMMA fuel in two supersonic combustor configurations: a cavity-assisted flameholding combustor and a variable-angle diverging combustor. The cavity combustor is analyzed as a baseline case and results are compared directly with experimental data. Three combustor geometry states corresponding to ignition, early-burning, and steady-burning conditions are investigated. Meshes are assessed through a systematic grid refinement method to establish grid independence. A novel variable-angle diverging …

Connecting The Existing Fiber Infrastructure To The Future With Antiresonant Hollow Core Fibers, Timothy Bate

Graduate Studies Theses and Dissertations 2026

Optical fiber systems based on solid-core silica waveguides underpin modern telecommunications, high-power laser delivery, precision sensing, and coherent optical systems. However, nonlinear effects, material absorption, and thermal limitations within silica increasingly constrain further scaling in both optical power and transmission performance. Antiresonant hollow-core fibers provide a promising alternative by guiding light predominantly in air, substantially reducing nonlinear interactions, latency, and optical damage while enabling transmission regimes inaccessible to conventional solid-core fibers. Despite rapid advances in antiresonant hollow-core fiber attenuation and power handling, one of the largest remaining barriers to widespread adoption is reliable integration with the existing solid-core fiber ecosystem. …

Making Unsafe Sequences Unexecutable: Formal Protocol Enforcement For Cyber-Physical Systems, Arthur Amorim

Graduate Studies Theses and Dissertations 2026

Cyber-physical systems execute physical actions in response to software commands, making their communication protocols a primary attack surface. A stealthy attack is a sequence of individually valid messages that violates a required ordering, driving the system into an unsafe state without malware or protocol violation. Existing defenses examine messages or physical state in isolation, not protocol level sequences, and cannot prevent them. Preventing them requires enforcement that makes unsafe sequences unexecutable at the communication boundary.

Formal methods offer a principled path to enforcement, but no tool spans specification to safe deployed hardware. Model checking automates proofs but has no certified …

Effects Of Back-Pressure On Pseudo-Shock Systems, Emil C. Alunno

Graduate Studies Theses and Dissertations 2026

The isolator of a scramjet engine houses a pseudo-shock, a compressive flow structure that raises the static pressure and decelerates the incoming supersonic flow for efficient combustion while shielding the inlet from the elevated pressure downstream. Under sufficient back pressure the leading shock bifurcates and forms a shock train followed by a shockless mixing region, and the resulting system oscillates even under nominally steady conditions; this unsteadiness distorts the flow, can drive the pseudo-shock out of the isolator and unstart the inlet. This thesis experimentally examines how a pseudo-shock in a constant-area isolator at a measured entrance Mach number of …

Integrated Optical Probes For Confocal Scanning Imaging And Adjustable Coherent-Gated Dynamic Sensing, Yonglin Huang

Graduate Studies Theses and Dissertations 2026

Optics and photonics have been one of the most important sciences and technologies that impact modern human life in a big way. For example, fiber-optics for communications and artificial intelligence. Optical probes are critical components for optical imaging and optical sensing technologies that have been actively researched and developed in the past decades. Advanced fiber-optic sensor probes with smaller size, better performance, lower noise, higher photon efficiency, rapid sensing time, and lower cost are needed in many applications, such as nanoscale material science, chemistry, and biomedical fields, etc.  In this project, new fiber-optic sensor probe technologies and integrated micro-optic devices …

Cultivating Workplace Happiness In Technology Workers, Cherie A. Herrin

Graduate Studies Theses and Dissertations 2026

Technology workers are central to the innovation and performance of modern organizations and retaining them is a persistent challenge for modern organizations. One important aspect of retention in many contexts is Workplace Happiness, which has been argued to improve worker performance and reduce turnover; however, there is little empirical evidence of the effectiveness of these interventions for technology workers. This dissertation develops a model in which two affective states, Workplace Happiness and Workplace Distress, mediate the relationships between six socio-technical work conditions and two behavioral outcomes: Turnover Intent and Work Execution (i.e., self-rated work performance and quality). A systematic literature …

Communication College Students And Their Career Readiness: An Evaluation From The Employer's Perspective, Carson Mann

Graduate Studies Theses and Dissertations 2026

Higher education institutions are seen as places that educate students in specific subjects and provide training that leads to either a career or further learning opportunities. Unfortunately, public trust in higher education has plummeted since 2015. The evolution of higher education has been the subject of speculation by various groups, but developing translational skills through effective internships could very well solve the issue at hand. Institutions ought to have data -driven evidence about their disciplines’ effectiveness and their translational ability to the workforce. To understand this, student career readiness must be evaluated. Students' career readiness is a vital measure of …

Genuine And Meaningful Black Character Narratives In Video Games, Derek L. Manns

Graduate Studies Theses and Dissertations 2026

The lack of Black representation in video games reflects stereotypes and hollow narratives. Authentic and meaningful design of Black characters allows Black players a reflection of emotional attachments everyone wants when playing a game. Examining racial identities through avatars, critiquing the notion that customization equates to racial inclusivity, limited options and predominant, white-coded protagonists reinforce systemic biases in games (Dietrich, 2013). My Afrofuturistic content analysis framework explores Black culture with a future of speculative fiction. Reimagining the past, present, and future through Black narratives for alternate futures (Womack). Integrating these ideas enhance culture and aesthetics in this dissertation to highlight …

Towards An Understanding Of Learning In Immersive Virtual Reality: Investigating Learning Affordances To Bridge Theory And Practice, Gregory Mcgowin

Graduate Studies Theses and Dissertations 2026

This dissertation examines how modality-specific scaffolding shapes performance, presence, and transfer in immersive virtual reality (I-VR). Framed through theories of extended cognition, real-time guidance is conceptualized as cognitive scaffolding that structures perception and action by embedding task-relevant information within the environment. Situated within the learning sciences and informed by 4E cognition (embodied, embedded, enactive, extended), this work develops a framework for understanding how I-VR affordances relate to learning and performance.

The empirical study investigates how scaffolding modality (audio vs. visual) influences presence and performance in a VR racing simulation. Using a 3 × 2 × 2 mixed factorial design, 111 …

Experimental And Computational Characterization Of A Rotorcraft-Tiltrotor Model Using Morphing Wings For Whirl Flutter Instability, Darrell Nieves Lugo

Graduate Studies Theses and Dissertations 2026

Tiltrotor rotorcraft configurations combine the capabilities of vertical and forward flight, offering a crucial and advantageous design for maximizing the operational flight envelope. This versatility enables broad adaptability across numerous designs and platforms, including unmanned aerial vehicles (UAVs), micro-air vehicles (MAVs), and vertical take-off and landing (VTOLs) aircraft. However, propeller-based aircraft are susceptible to an aeroelastic instability at high flight speeds known as whirl flutter. This instability phenomena is a crucial research task and problem to investigate, as with advances in manufacturing and vehicle designs, these can yield new rotorcraft formats capable of advancing the flight envelopes at higher cruise …