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College Of Natural Sciences Newsletter, February 2023, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 4, Issue 1

Page 1 Dean's Message
Page 2 Awards and Recognition
Page 3-4 Nobel Recipient Visits Campus
Page 4 Adopting the Pantry
Page 5 Growing a Recruitment Mindset
Page 6 February Outreach Events
Page 7 Media Coverage of CNS
Page 8 Open PRAIRIE Data
Page 9 54th Geography Convention, and Tom Loveland EROS Geography Scholarship
Page 10 Photos of Dr. Carolyn Bertozzi's Visit

Associations Between Preweaning Calf Feeding Behaviors With Age At First Calving And Lactational Performance Using An Automatic Calf Feeder, Turner H. Swartz, Christina Petersson-Wolfe

Dairy Science and Food Science Faculty Publications: 2022 to Present

The objective of this retrospective observational study was to determine whether preweaning calf behaviors and milk replacer (MR) intake from an automatic calf feeder were associated with age at first calving and first-lactation performance. Calves were housed in groups with access to an automatic calf feeder for 7 wk with a maximum milk allowance of 1,800 g/d of MR (12 L/d). Outcomes of interest included age at first calving (n = 137), first-lactation mature-equivalent 305-d (ME305) milk yield (n = 132), and first-lactation ME305 energy-corrected milk (ECM) yield (n = 132). Linear models included the fixed effects of the daily …

College Of Natural Sciences Newsletter, November 2022 - January 2023, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volme 3, Issue 7

Page 1 Dean's Message
Page 2 Awards & Recognition
Page 3 Sioux Falls Middle School Visit
Page 4 Bio-Micro Day of Scholars
Page 5 GIS Day at USGS EROS
Page 6 Indigenous People's Festival, & Visiting Jack's Imagination Lab
Page 7 Media Coverage of CNS, & Research Highlights from Geography & Geospatial Sciences
Page 8 Media Coverage of CNS. cont.
Page 9 Open PRAIRIE Data
Page 10 Recent Publications from CNS
Page 11 Recent Publications from CNS. cont.
Page 12 CNS Holiday Snapshots
Page 13 & 14 Fall 2022 Dean's List
Page 12-14 Fall 2022 Outreach …

Covariance-Based Clustering For Classification, Theophilus Anim Bediak, Andrew Simpson, Semhar Michael

SDSU Data Science Symposium

Classification involves assigning observations to known classes based on some common features. Commonly known methods for solving classification problems include linear and quadratic discriminant analysis. Both methods assume each class follows a multivariate normal distribution with common covariance matrix for LDA and with class specific covariances for QDA. The equal covariance assumption in LDA is often described as almost unrealistic and simplistic in real-life applications, resulting in less flexibility and high bias. Estimating class-specific covariance matrices becomes a problem when there are large number of classes. This work proposes a method which is a compromise between LDA and QDA. Here …

2023 Sdsu Data Science Symposium Presentation Abstracts, Department Of Mathematics & Statistics

SDSU Data Science Symposium

This document contains abstracts for presentations and posters 2023 SDSU Data Science Symposium.

2023 Sdsu Data Science Symposium Presentation Abstracts, Department Of Mathematics & Statistics

SDSU Data Science Symposium

This document contains abstracts for presentations and posters 2023 SDSU Data Science Symposium.

Refining The Moose Serum Progesterone Threshold To Diagnose Pregnancy, Madeline Struck, William J. Severud, Yvette M. Chenaux-Ibrahim, Edmund J. Isaac, Janine L. Brown, Seth A. Moore, Tiffany M. Wolf

Natural Resource Management Faculty Publications

Pregnancy determination is necessary for sound wildlife management and understanding population dynamics. Pregnancy rates are sensitive to environmental and physiological factors and may indicate the overall trajectory of a population. Pregnancy can be assessed through direct methods (rectal palpation, sonography) or indicated using hormonal assays (serum progesterone or pregnancy-specific protein B, fecal progestogen metabolites). A commonly used threshold of 2 ng/ml of progesterone in serum has been used by moose biologists to indicate pregnancy but has not been rigorously investigated. To refine this threshold, we examined the relationship between progesterone concentrations in serum samples and pregnancy in 87 moose ( …

Receiver Mount Design, Transmitter Depth, And Wind Speed Affect Detection Probability Of Acoustic Telemetry Transmitters In A Missouri River Tributary, Tanner L. Carlson, Lindsey A. P. Labrie, Jeff S. Wesner, Steven P. Chipps, Alison A. Coulter, Benjamin J. Schall

Natural Resource Management Faculty Publications

Background One of the most important considerations for acoustic telemetry study designs is det:ection probability between the transmitter and the receiver. Variation in environmental (i.e., wind and flow) and abiotic (i.e., bathymetry) conditions among aquatic systems can lead to differences in detection probability temporally or between systems. In this study we evaluate the effect of distance, receiver mount design, transmitter depth, and wind speed on detection probabilities of two models of acoustic transmitters in a mid-sized river. InnovaSea V16-6H (hereafter V16) and V13-1L (hereafter V13) tags were deployed in the James River, SD at 0.36 m (deep) and 2.29 m …

Trophically Integrated Ecometric Models As Tools For Demonstrating Spatial And Temporal Functional Changes In Mammal Communities, Rachel A. Short, Jenny L. Mcguire, P. David Polly, A. Michelle Lawing

Natural Resource Management Faculty Publications

We are in a modern biodiversity crisis that will restructure community compositions and ecological functions globally. Large mammals, important contributors to ecosystem function, have been affected directly by purposeful extermination and indirectly by climate and land-use changes, yet functional turnover is rarely assessed on a global scale using metrics based on functional traits. Using ecometrics, the study of functional trait distributions and functional turnover, we examine the relationship between vegetation cover and locomotor traits for artiodactyl and carnivoran communities. We show that the ability to detect a functional relationship is strengthened when locomotor traits of both primary consumers (artiodactyls, n …

2023 Sdsu Data Science Symposium Schedule, South Dakota State University

SDSU Data Science Symposium Programs

No abstract provided.

Whole Genome Sequencing For Identification Of Putative Causative Alleles For Hemochromatosis In Horses, Anna M. Rauber-Ramos

Schultz-Werth Award Papers

Hemochromatosis is liver disorder in which excess iron is stored in the liver, leading to iron overload and extensive liver damage that can prove fatal. Based on human precedence, a genetic cause for idiopathic hemochromatosis in horses is suspected. Two horses with hemochromatosis were whole genome sequenced, with variants in candidate genes prioritized in analyses of potential pathogenicity. No clear putative variants were found to be present in both horses, suggesting an etiology more complex than the initially suspected Mendelian inheritance. A heterozygous nonsense mutation in STEAP3 metalloreductase (STEAP3) was identified as a potential contributor to hemochromatosis in one of …

Weed-Induced Crop Yield Loss: A New Paradigm And New Challenges, David Horvath, Sharon A. Clay, Clarence J. Swanton, James V. Anderson, Wun S. Chao

Agronomy, Horticulture and Plant Science Faculty Publications

Direct competition for resources is generally considered the primary mechanism for weed-induced yield loss. A re-evaluation of physiological evidence suggests weeds initially impact crop growth and development through resource-independent interference. We suggest weed perception by crops induce a shift in crop development, before resources become limited, which ultimately reduce crop yield, even if weeds are subsequently removed. We present the mechanisms by which crops perceive and respond to weeds and discuss the technologies used to identify these mechanisms. These data lead to a fundamental paradigm shift in our understanding of how weeds reduce crop yield and suggest new research directions …

A Case Study: Electronic Teaching Methods From The Pandemic Era That Students Still Appreciate, Douglas De Boer

ASEE North Midwest Section Annual Conference 2023 Publications

Background
The COVID-19 pandemic of 2020-2022 caused a rapid shift away from face-to-face instruction and toward online instruction. Due to the emergency speed with which the changes were rolled out results varied, desirable data on the quality of the changes was often not kept, and the retrospective study of what happened and the outcomes thereof is ongoing at the time this case study was written.
Purpose/Hypothesis
This case study is a comparison of the author’s experience with the current literature. It is hypothesized that some of the techniques used during the pandemic were effective and should be retained and/or further …

Dairy And Food Science Department Records, Sdsu Archives And Special Collections, Hilton M. Briggs Library

University Archives

South Dakota State University has a longstanding tradition of dairying education and research. Established in 1897, the Department has offered specialized coursework, short courses in creamery operations, and advanced degree programs in Dairy Science.

This collection offers a comprehensive view of the Department of Dairy and Food Science history and activities. The material includes a wide range of materials such as correspondence, reports, photographs, and miscellaneous items. Highlights include scrapbooks from the early 1900s, and photographs documenting the evolution of the dairy industry. The Dairy Husbandry records focus on correspondence and office files, providing insights into the department's interactions with …

Hilton M. Briggs Library Records, Sdsu Archives And Special Collections, Hilton M. Briggs Library

University Archives

The Library is a learning and research center that inspires academic excellence, creative scholarship, and student engagement. This collection is composed of Dean's office records, public services records, technical services records, South Dakota State University Archives and Special Collections, committee records, and faculty and staff meeting records.

A Review On Biogenic Silver Nanoparticles As Efficient And Effective Antidiabetic Agents, Maryam Wahab, Srinivas Janaswamy

Dairy Science and Food Science Faculty Publications: 2022 to Present

The frontiers of nanomedicine are consistently being challenged by the gradually expanding knowledge of the properties of nanoparticles. Toward this end, biogenic synthesis of silver nanoparticles utilizing natural compounds in plants as reducing and capping agents grabbed considerable attention, in lieu of synthetic hazardous physical and chemical techniques. Green synthesis of silver nanoparticles (AgNPs) has proven safe and effective in treating type 2 diabetes mellitus. Currently, biogenic silver nanoparticles have gained importance as safe and efficient antiglycation agents. Therapeutic strategies by employing nanomedicines from natural sources have been initiated to end the limitations of currently available medications for the treatment …

Southeast South Dakota Experiment Farm Annual Progress Report, 2023, Southeast South Dakota Research Farm

Agricultural Experiment Station and Research Farm Annual Reports

This is an annual report of the research program at the Southeast South Dakota Research Farm in cooperation with South Dakota Agricultural Experiment Station and the SDSU College of Agriculture, Food, and Environmental Sciences and has special significance for those engaged in agriculture and the agriculturally related businesses in the ten county area of Southeast South Dakota. The results shown are not necessarily complete or conclusive. Interpretations given are tentative because additional data resulting from continuation of these experiments may result in conclusions different from those based on any one year.

2023 South Dakota Rancher Survey Descriptive Results, Tong Wang, Sujan Ghimire, Stephan Cheye

Midwestern Farm and Producer Surveys and Policy Briefs

Researchers at South Dakota State University surveyed South Dakotan ranchers between January and March 2023 to better understand their beliefs and perspectives on various grazing techniques, which will allow programs to be tailored to better serve their needs in the future. A sample of 3,500 ranchers were purchased from DTN that contains 3,500 records from South Dakota with 50+ livestock and 100+ acres of pasture.

Effects Of Anthocyanin Supplementation In Diet On Glycemic And Related Cardiovascular Biomarkers In Patients With Type 2 Diabetes: A Systematic Review And Meta-Analysis Of Randomized Controlled Trials, Ting Mao, Fnu Akshit, Maneesha S. Mohan

Dairy Science and Food Science Faculty Publications: 2022 to Present

Purpose: This study is the first systematic review and meta-analysis based on RCTs on the effects of anthocyanins on patients with type 2 diabetes mellitus (T2DM) and the effect on T2DM-related cardiovascular disease. Methods: RCTs published in English from five electronic databases were evaluated for glycated hemoglobin (HbA1c), fasting blood glucose (FBG), 2-h postprandial blood glucose, fasting insulin, model assessment for insulin resistance, triglycerides (TG), total cholesterol (TC), high-density lipoprotein (HDL) cholesterol, low-density lipoprotein (LDL) cholesterol, systolic blood pressure, and diastolic blood pressure. The quality of the studies was rated (Cochrane Risk of Bias tool) and weighted mean differences were …

Ultrasound-Assisted Cavitation Effect On The Biofilm-Forming Ability Of Common Dairy Sporeformers, Taghreed Almalki, Sanjeev Anand

Dairy Science and Food Science Faculty Publications: 2022 to Present

Thermoduric sporeformers survive heat treatment and can form biofilm on contact food surfaces that is difficult to clean and may cause cross contamination to milk products. It was hypothesized that cavitation would influence sporeformers’ ability to attach to contact surfaces and form biofilm. Common dairy sporeformers of Geobacillus stearothermophilus, Bacillus licheniformis, and Bacillus sporothermodurans were individually inoculated in sterile skim milk at the levels of 6.0 log CFU/mL. Inoculated samples were treated by cavitation at 80% amplitudes for 10 min each. Pre and post samples were used to develop biofilms on stainless steel coupons under static conditions. Scanning electron micrograph …

The Effects Of Dexamethasone Administration On Physiological, Behavioral, And Production Parameters In Dairy Cows After A Difficult Calving, Turner H. Swartz, Dana Bryant, Hollie Schramm, Allison Duncan, Robin White, Cynthia Wood, Christina Petersson-Wolfe

Dairy Science and Food Science Faculty Publications: 2022 to Present

Dairy cows are predisposed to diseases during the postpartum period. Dystocia has been associated with increased risk for disease, which is likely the result of increased tissue trauma and stress during the prolonged parturition. To attenuate the inflammatory response seen in dystocic animals and improve well-being, we assessed the effects of a glucocorticoid, dexamethasone administered within 12 h after calving. Dystocia was defined as a difficult birth resulting in a prolonged calving (≥70 min after the amniotic sac appears) and was monitored through 3 video cameras in the close-up dry-cow pen. Cows meeting the dystocia definition were randomly …

Evaluation Of Reticuloruminal Temperature For The Prediction Of Clinical Mastitis In Dairy Cows Challenged With Streptococcus Uberis, Zelmer Rodriguez, Quinn K. Kolar, Kirby C. Krogstad, Turner H. Swartz, Llkyu Yoon, Barry J. Bradford, Pamela L. Ruegg

Dairy Science and Food Science Faculty Publications: 2022 to Present

Automated monitoring devices have become increasingly utilized in the dairy industry, especially for monitoring or predicting disease status. While multiple automated monitoring devices have been developed for the prediction of clinical mastitis (CM), limitations in performance or applicability remain. The aims of this study were to (1) detect variations in reticuloruminal temperature (RRT) relative to an experimental intramammary challenge with Streptococcus uberis and (2) evaluate alerts generated automatically based on variation in RRT to predict initial signs of CM in the challenged cows based on severity of clinical signs and the concentration of bacteria (cfu/mL) in the infected quarter separately. …

Impact Of A Respiratory Health Program On Attitudes, Knowledge, And Behaviors Related To Respirator Use In Farmers And Ranchers, Rebecca White

Doctor of Nursing Practice (DNP) Practice Innovation Projects

Background: Studies show an association between agricultural occupational hazards and respiratory illnesses. Personal protective equipment (PPE) has protective effects, but limited education and inadequate respiratory protection are common among agricultural workers.
Methods: A demographic questionnaire and two pre-intervention surveys were initially administered to farmers and ranchers. The surveys measured attitude, knowledge, and behaviors related to respiratory safety and PPE practices. Pulmonary function testing, educational handouts, and respirator fit testing was provided in a variety of settings, and one N95 mask was given to each participant. Two surveys were distributed 3 months post-intervention.
Results: The pre- and post-intervention surveys were matched …

South Dakota State University Graduate Catalog 2023-2024, South Dakota State University

South Dakota State University Catalogs and Bulletins: 1935 to present

No abstract provided.

South Dakota State University Undergraduate Catalog 2023-2024, South Dakota State University

South Dakota State University Catalogs and Bulletins: 1935 to present

No abstract provided.

Comparing Biofilm Forming Potential Of Listeria Species On Non-Food And Food-Contact Surfaces Of Importance To The Dairy Industry, Hannah Cooper

The Journal of Undergraduate Research

Listeria monocytogenes (Lm) is a foodborne pathogen of major safety concerns. This bacterium can resist/adapt to environmental stressors and persist through forming robust biofilms despite dairy plants following stringent surface cleaning protocols. Surface roughness is considered a major factor controlling bacterial attachment and biofilm formation. Food contact surfaces like stainless steel (SS) have low surface roughness for easy cleaning. On the other hand, non-contact surfaces like floors need a rougher surface to ensure employee safety. Hence, we hypothesized that Listeria biofilm formation would be lower on stainless steel compared to clay brick (CB; common flooring material in dairy plants). …

The Impact Of Increasing Dietary Levels Of Hybrid Rye On Growing-Finishing Pig Performance, Carcass Characteristics, And Meat Quality, Caitlyn Sullivan

Electronic Theses and Dissertations

The objective of this trial was to determine the effects of increasing dietary levels of hybrid rye on growth performance, carcass characteristics, and product quality of growing-finishing pigs. A total of 2,400 barrows and gilts (FAST x PIC 800, initial wt. 44.9 kg) were utilized, as pigs were randomly assigned to one of the four dietary treatments. Diets were corn-soybean based and hybrid rye replaced corn at 0, 40, 70, or 100%. All diets were formulated to meet or exceed the 2012 NRC requirements for all nutrients and fed through a five-phase feeding program (44.9 to 125 kg, respectively). Pigs …

Feeding Strategies To Improve Gastrointestinal Health And Growth Performance Of Confinement Fed Ruminants, Forest Laine Francis

Electronic Theses and Dissertations

The objective of this dissertation was to investigate how feed additives, orally administered direct fed microbials, and dietary management strategies may be beneficial in improving gastrointestinal health and growth performance of confinement fed ruminants. Four studies were conducted using confinement fed steers (n = 3) and wether lambs (n = 1) to determine the effects of the products and management strategies used. The first study was conducted on finishing steers to investigate the effects of increasing doses of an encapsulated butyric acid and zinc supplement (BZ) on growth performance, efficiency of dietary net energy utilization, carcass characteristics, and gastrointestinal health. …

Genome-Wide Association Studies And Advanced Genomic Selection Strategies: Towards The Optimization Of Oat (Avena Sativa L) Breeding, Girma Ayana

Electronic Theses and Dissertations

Oats are important cereal crops worldwide, primarily valued for their nutritional and health benefits. The primary goal of oat breeding programs is to accelerate genetic gain to develop oat varieties with the desired product profiles, with the aim of meeting the needs and expectations of growers, processors, and consumers. Achieving this goal involves conducting extensive and resource-intensive field trials, particularly for traits such as crop yield and grain quality, which are strongly influenced by environmental factors. The availability of cost-effective molecular markers and tools like genome-wide association studies (GWAS) and genomic selection have the potential to accelerate the oat breeding …

Develop Biochar-Based Control Release Nitogen Fertilizers Using Biodegradable Polypropylene, Abdulkarim Aldekhail

Electronic Theses and Dissertations

Nitrogen (N) is an indispensable key nutrient for crop plant growth, health, and yield, which significantly affects crop productivity. N fertilizers are wildly utilized in agriculture. Managing N application stands as a necessity to achieve optimal crop yield. Urea is one of the most common N fertilizers in agricultural practices due to its high N content and cost-effectiveness. Due to its commercial scale, feasibility, and reliability, it is demonstrating potential as a medium to improve agricultural sustainability. However, economic challenges, and environmental pollution remain as setbacks. This research focuses on selecting cost-effective and environmentally friendly coating materials for the fabrication …