Digital Commons Network^™

Reflections On Stem, Standards, And Disciplinary Focus, Philip A. Reed

STEMPS Faculty Publications

The article offers information concerning STEM education, technology education discipline, and standards for technological literacy. It discusses a revision of the "Standards for Technological Literacy" transcending the existing K-12 focus as well as including PreK, informal and extracurricular technology education, adult learning, and other settings.

Fostering Giftedness And Creativity: Implementing Engineering By Design In Kuwait, Nathan Mentzer, Philip A. Reed, Meshari Alnouri, Mohammad Barbarji

STEMPS Faculty Publications

The article offers information on a partnership between the International Technology & Engineering Educators Association (ITEEA) and the Sabah Al Ahmad Center for Giftedness and Creativity (SACGC) to support innovation and design education. The partnership is aimed towards the implementation of the Engineering byDesign (EbD) curriculum and contribute towards building a Kuwaiti society that fosters giftedness and creativity.

The Utility Of Storytelling Strategies In The Biology Classroom, Elizabeth Csikar, Jill E. Stefaniak

STEMPS Faculty Publications

Conveying scientific information with high intrinsic cognitive load to students is a challenge. Often, students do not have the existing schema to incorporate the information in a comprehensive manner. One method that has shown promise is storytelling. Storytelling has been successfully used to convey public health information to non-experts. Therefore, it was of interest to determine whether storytelling could be used in the classroom to present information with high intrinsic load to students in a meaningful manner. This study used a post-test only quasi-experimental study design to explore the utility of storytelling as an instructional strategy in anatomy and physiology …

Motivation As A Complex System: Semester-Long Recursive Dynamics Of Expectancy-Value Constructs In Undergraduate Biology, Avi Kaplan, Xi Hang Cao, Ting Dai, Zoran Obradovic, Tony Perez, Jennifer G. Cromley, Kyle Mara, Michael J. Balsai

STEMPS Faculty Publications

The predominant aggregate-statistical analyses in motivational research manifest assumptions that stand in tension with understandings of motivational phenomena as dynamic, contextual, and variable among individuals. Using constructs from expectancy-value theory, we collected 13 weekly waves of data from 145 undergraduate students during one semester of an introductory biology course. We analyzed the data using dynamic autoregressive mixed-effects modeling, which captures the individual-level recursive processes among constructs, and then examined patterns across individuals’ motivational trajectories to discern general principles by which the expectancy-value system operates. The findings contribute to robust theoretical understandings of expectancy-value processes, and demonstrate the application of an …

Does Channel Island Acmispon (Fabaceae) Form Cohesive Evolutionary Groups?, Mitchell E. Mcglaughlin, Lynn Riley, Kaius Helenurm, Lisa A. Wallace

Biological Sciences Faculty Publications

The California Channel Islands are unique relative to other island chains due to their close proximity to the California mainland and the fact that individual islands, or groups of islands, vary in their distance to the mainland and other islands. This orientation raises questions about whether island taxa with widespread distributions form cohesive evolutionary units, or if they are actually composed of several distinct evolutionary entities, either derived from independent mainland-to-island colonization events or divergence due to prolonged allopatric isolation. The 4 northern islands are clustered in a line (6-8 km separation among islands), while the 4 southern islands are …

Interesting, Provocative, And Enigmatic: Morphological Observations On Southeastern Quillworts (Isoetes Isoetaceae, Lycopodiophyta, Rebecca D. Bray, Peter W. Schafran, Lytton J. Musselman

Biological Sciences Faculty Publications

The unique morphology of quillworts has received limited attention, and such studies have been limited to only a few species. Our extensive field work during the past two decades has revealed variation in the structures of the plant, including the rhizomorph, scales, phyllopodia, and abscission caps. Polarity of the axes of southeastern quillwort rhizomorphs varies from discoid (most species), to elongate, to upright with axis branching in several species. In species of intermittent streams, these branched rhizomorphs produce plantlets that break off in running water. Scales are tiny brown or black structures in alternating whorls with sporophylls (leaves). They are …

Natural History Of The Southern Bog Lemming In Southeastern Virginia, Robert K. Rose

Biological Sciences Faculty Publications

The isolated subspecies of Southern Bog Lemming of southeastern Virginia, Synaptomys cooperi helaletes, has been studied extensively since its "rediscovery" in the Great Dismal Swamp in 1980. Multiple studies using pitfall traps, starting in the Great Dismal Swamp National Wildlife Refuge and then extending elsewhere in southeastern Virginia and adjacent northeastern North Carolina, have revealed lemmings to be much more widespread and often more common than previously believed, with their presence now confirmed as far west as Surry and Sussex counties, about 30 km east of Petersburg, Virginia. When present, lemmings often are among the most numerous members of …

Size-Dependent Inhibitory Effects Of Antibiotic Drug Nanocarriers Against Pseudomonas Aeruginosa, Feng Ding, Preeyaporn Songkiatisak, Pavan Kumar Cherukuri, Tao Huang, Xiao-Hong Nancy Xu

Chemistry & Biochemistry Faculty Publications

Multidrug membrane transporters (efflux pumps) are responsible for multidrug resistance (MDR) and the low efficacy of therapeutic drugs. Noble metal nanoparticles (NPs) possess a high surface-area-to-volume ratio and size-dependent plasmonic optical properties, enabling them to serve both as imaging probes to study sized-dependent MDR and as potential drug carriers to circumvent MDR and enhance therapeutic efficacy. To this end, in this study, we synthesized three different sizes of silver nanoparticles (Ag NPs), 2.4 ± 0.7, 13.0 ± 3.1, and 92.6 ± 4.4 nm, functionalized their surface with a monolayer of 11-amino-1-undecanethiol (AUT), and covalently conjugated them with antibiotics (ofloxacin, Oflx) …

Novel Survivin Inhibitor For Suppressing Pancreatic Cancer Cells Growth Via Downregulating Sp1 And Sp3 Transciption Factors, Myrna Hurtado, Umesh T. Sankpal, Aboubacar Kaba, Shahela Mahammad, Jaya Chhabra, Deondra T. Brown, Raj K. Gurung, Alvin A. Holder, Jamboor K. Vishwanatha, Riyaz Basha

Chemistry & Biochemistry Faculty Publications

Background/Aims: Targeting survivin, an anti-apoptotic protein and mitotic regulator, is considered as an effective therapeutic option for pancreatic cancer (PaCa). Tolfenamic acid (TA) showed anti-cancer activity in pre-clinical studies. A recent discovery demonstrated a copper(II) complex of TA (Cu-TA) can result in higher activity. In this study, the ability of Cu-TA to inhibit survivin and its transcription factors, Specificity protein (Sp) 1 and 3 in PaCa cell lines and tumor growth in mouse xenograft model were evaluated.

Methods: Cell growth inhibition was measured in MIA PaCa-2 and Panc1 cells for 2 days using CellTiter-Glo kit. Sp1, Sp3 and survivin expression …

A Purification And In Vitro Activity Assay For A (P)Ppgpp Synthetase From Clostridium Difficile, Astha Pokhrel, Asia Poudel, Erin B. Purcell

Chemistry & Biochemistry Faculty Publications

Kinase and pyrophosphokinase enzymes transfer the gamma phosphate or the beta-gamma pyrophosphate moiety from nucleotide triphosphate precursors to substrates to create phosphorylated products. The use of γ-³²-P labeled NTP precursors allows simultaneous monitoring of substrate utilization and product formation by radiography. Thin layer chromatography (TLC) on cellulose plates allows rapid separation and sensitive quantification of substrate and product. We present a method for utilizing the thin-layer chromatography to assay the pyrophosphokinase activity of a purified (p)ppGpp synthetase. This method has previously been used to characterize the activity of cyclic nucleotide and dinucleotide synthetases and is broadly suitable for …

Needlestick Injury Prevention Training Among Health Care Workers In The Caribbean, Muge Akpinar-Elci, Satesh Bisaisee, Praveen Durgampudi, Roger Radix, Julietta Rodriquez-Guzman, Myngoc Thuy Nguyen, Omur Cinar Elci

Center for Global Health Publications

The rate of human immunodeficiency virus (HIV), hepatitis B virus (HBV), and hepatitis C virus (HCV) infections among health care workers that is caused by sharps injuries is higher in the Caribbean and Latin America than in other regions of the world. To respond to and reduce occupational exposures to bloodborne pathogens while also strengthening capacities in the Caribbean, needlestick injury prevention training programs for health care workers were implemented, beginning in 2011. The programs included lectures, workshops, policy reviews, evaluations of safety devices, and workplace assessment. During the training, baseline data from health care workers on their personal history …

Modern American Extremism And Domestic Terrorism: An Encyclopedia Of Extremists And Extremist Groups, Robert Tench

Libraries Faculty & Staff Publications

Book review of Barry J. Ballec'sk, Modern American Extremism and Domestic Terrorism; An Encyclopedia of Extremists and Extremist Groups. (2018) Santa Barbara, California: ABC-CLIO, ISBN 9781440852749.

Nocturnally-Migrating Birds Traverse Earth's Most Light-Polluted Regions, And Bright Lights Confound Their Habitat Use En Route, Jeffrey J. Butler, James D. Mclaren, Sergio A. Cabrera-Cruz, Jaclyn A. Smolinsky, Timothy D. Schreckengost, Matthew E. Boone, E. Emiel Van Loon, Deanna K. Dawson, Eric L. Walters

Biological Sciences Faculty Publications

No abstract provided.

Comparison Between The Water Activation Effects By Pulsed And Sinusoidal Helium Plasma Jets, Han Xu, Dingxin Liu, Wenjie Xia, Chen Chen, Weitao Wang, Zhijie Liu, Xiaohua Wang, Michael G. Kong

Bioelectrics Publications

Comparisons between pulsed and sinusoidal plasma jets have been extensively reported for the discharge characteristics and gaseous reactive species, but rarely for the aqueous reactive species in water solutions treated by the two types of plasma jets. This motivates us to compare the concentrations of aqueous reactive species induced by a pulsed and a sinusoidal plasma jet, since it is widely reported that these aqueous reactive species play a crucial role in various plasma biomedical applications. Experimental results show that the aqueous H₂O₂, OH/O₂⁻, and O₂⁻/ONOO⁻ induced by the …

Plasma Medicine: A Brief Introduction, Mounir Laroussi

Electrical & Computer Engineering Faculty Publications

This mini review is to introduce the readers of Plasma to the field of plasma medicine. This is a multidisciplinary field of research at the intersection of physics, engineering, biology and medicine. Plasma medicine is only about two decades old, but the research community active in this emerging field has grown tremendously in the last few years. Today, research is being conducted on a number of applications including wound healing and cancer treatment. Although a lot of knowledge has been created and our understanding of the fundamental mechanisms that play important roles in the interaction between low temperature plasma and …

An Extensible Mathematical Model Of Glucose Metabolism. Part I: The Basic Glucose-Insulin-Glucagon Model, Basal Conditions And Basic Dynamics, Caleb L. Adams, D. Glenn Lasseigne

Mathematics & Statistics Faculty Publications

A basic model highlighting the counter-regulatory roles of insulin and glucagon is proposed to start a series of models designed to explore continuous rein control and major aspects of glucose metabolism. The three-by-three dynamical system uses black boxes to model unit processes such as the dependencies of insulin secretion rate and the glucagon secretion rate on blood glucose concentration. The dependency of basal conditions on insulin resistance and any defects in insulin or glucagon secretion are shown. Since over-production of hepatic glucose exists early in the history of diabetes, it is important that mathematical models should account for this effect …

A Dynamic Ocean Management Tool To Reduce Bycatch And Support Sustainable Fisheries, Elliot L. Hazen, Kylie L. Scales, Sara M. Maxwell, Dana K. Briscoe, Heather Welch, Steven J. Bograd, Helen Bailey, Scott R. Benson, Tomo Eguchi, Heidi Dewar

Biological Sciences Faculty Publications

Seafood is anessential sourceofprotein formore than3billionpeopleworldwide, yet bycatchof threatened species in capture fisheries remains a major impediment to fisheries sustainability. Management measures designed to reduce bycatch often result in significant economic losses and even fisheries closures. Static spatial management approaches can also be rendered ineffective by environmental variability and climate change, as productive habitats shift and introduce new interactions between human activities and protected species. We introduce a new multispecies and dynamic approach that uses daily satellite data to track ocean features and aligns scales of management, species movement, and fisheries. To accomplish this, we create species distribution models for …

Dialogical Numbers: Counting Humanimal Pain In J.M. Coetzee's Elizabeth Costello, Mike Piero

English Faculty Publications

This essay argues that J.M. Coetzee's Elizabeth Costello stages numerical sequences strategically, dialogically, and parodically in order to call attention to the ideological weight involved in counting. Focusing on how one counts - and accounts for - human and nonhuman animal pain, I contend that the repetition of numbers in the novel works to subvert the neoliberal faith put in numbers, quantification, and data. Without succumbing to some religious-mystical numerology, this reading attempts to expose the fiction involved in the act of counting and the need to pay more attention to numerical discourse in literary fiction. In tracking these numbers …

Gain-Of-Function Experiments With Bacteriophage Lambda Uncover Residues Under Diversifying Selection In Nature, Rohan Maddamsetti, Daniel T. Johnson, Stephanie J. Spielman, Katherine L. Petrie, Debora S. Marks, Justin R. Meyer

Biological Sciences Faculty Publications

Viral gain-of-function mutations frequently evolve during laboratory experiments. Whether the specific mutations that evolve in the lab also evolve in nature and whether they have the same impact on evolution in the real world is unknown. We studied a model virus, bacteriophage λ, that repeatedly evolves to exploit a new host receptor under typical laboratory conditions. Here, we demonstrate that two residues of λ’s J protein are required for the new function. In natural λ variants, these amino acid sites are highly diverse and evolve at high rates. Insertions and deletions at these locations are associated with phylogenetic patterns indicative …

The Mechanisms Shaping The Repertoire Of Cd4(+)Foxp3(+) Regulatory T Cells, Piotr Kraj, Leszek Ignatowicz

Biological Sciences Faculty Publications

Regulatory T (Treg) cells expressing Foxp3 transcription factor control homeostasis of the immune system, antigenic responses to commensal and pathogenic microbiota, and immune responses to self and tumour antigens. The Treg cells differentiate in the thymus, along with conventional CD4⁺ T cells, in processes of positive and negative selection. Another class of Treg cells is generated in peripheral tissues by inducing Foxp3 expression in conventional CD4⁺ T cells in response to antigenic stimulation. Both thymic and peripheral generation of Treg cells depends on recognition of peptide/MHC ligands by the T-cell receptors (TCR) expressed on thymic Treg precursors or …

Better Living Through Chemistry: Addressing Emerging Antibiotic Resistance, Nathan P. Coussens, Ashley L. Molinaro, Kayla J. Culbertson, Tyler Peryea, Gergely Zahoránszky-Köhalmi, Matthew D. Hall, Dayle A. Daines

Biological Sciences Faculty Publications

The increasing emergence of multidrug-resistant bacteria is recognized as a major threat to human health worldwide. While the use of small molecule antibiotics has enabled many modern medical advances, it has also facilitated the development of resistant organisms. This minireview provides an overview of current small molecule drugs approved by the US Food and Drug Administration (FDA) for use in humans, the unintended consequences of antibiotic use, and the mechanisms that underlie the development of drug resistance. Promising new approaches and strategies to counter antibiotic-resistant bacteria with small molecules are highlighted. However, continued public investment in this area is critical …

Characterizing Habitat Suitability For A Central‐Place Forager In A Dynamic Marine Environment, Dana K. Briscoe, Sabrina Fossette, Kylie L. Scales, Elliott L. Hazen, Steven J. Bograd, Sara M. Maxwell, Elizabeth A. Mchuon, Patrick W. Robibson, Carey Kuhn, Daniel P. Costa, Larry B. Crowder, Rebecca L. Lewison

Biological Sciences Faculty Publications

Characterizing habitat suitability for a marine predator requires an understanding of the environmental heterogeneity and variability over the range in which a population moves during a particular life cycle. Female California sea lions (Zalophus californianus) are central‐place foragers and are particularly constrained while provisioning their young. During this time, habitat selection is a function of prey availability and proximity to the rookery, which has important implications for reproductive and population success. We explore how lactating females may select habitat and respond to environmental variability over broad spatial and temporal scales within the California Current System. We combine near‐real‐time …

Eleven Strategies For Getting Into Graduate School In Ecology & Evolutionary Biology, Eric Walters

Biological Sciences Faculty Publications

Getting into graduate school can be tough if you have not done your homework. I outline eleven strategies for increasing your chances of successfully being accepted into an ecology or evolutionary biology lab. Try to get good grades as an undergraduate, do well on the Graduate Record Exam (if applicable), join a lab reading group or undertake an undergraduate thesis, take time to forge relationships so you can have strong reference writers, obtain relevant work experience, author a publication, read peer-reviewed literature, attend national meetings, come up with some good research ideas, develop a relationship with a potential advisor, and …

Production And Correlation Of Reactive Oxygen And Nitrogen Species In Gas- And Liquid-Phase Generated By Helium Plasma Jets Under Different Pulse Widths, Zhijie Liu, Chunxi Zhou, Dingxin Liu, Dehui Xu, Wenjie Xia, Qingjie Cui, Bingchuan Wang, Michael G. Kong

Bioelectrics Publications

In this paper, we present the effects of the pulse width (PW) on the plasma jet's discharge characteristics, particularly focusing on the production and correlation of the reactive oxygen and nitrogen species (RONS) in gas- and liquid-phase. It is found that the length of plasma jet plume first increases before the PW of 10 μs, then gradually decreases and finally almost remains unchanged beyond 150 μs. The plasma bullet disappears after the falling edge of the voltage pulse at low PW, while it terminates far ahead of the falling edge of voltage pulse at high PW. This is …

Probing The Wave Nature Of Light-Matter Interaction, D. E. Boone, C. H. Jackson, A. T. Swecker, J. S. Hergenrather, K. S. Wenger, O. Kokhan, Balša Terzić, I. Melnikov, I. N. Ivanov, E. C. Stevens, G. Scarel

Physics Faculty Publications

The wave-particle duality of light is a controversial topic in modern physics. In this context, this work highlights the ability of the wave-nature of light on its own to account for the conservation of energy in light-matter interaction. Two simple fundamental properties of light as wave are involved: its period and its power P. The power P depends only on the amplitude of the wave’s electric and magnetic fields (Poynting’s vector), and can easily be measured with a power sensor for visible and infrared lasers. The advantage of such a wave-based approach is that it unveils unexpected effects of light’s …

Lack Of Delayed-Type Hypersensitivity In Striped Bass (Morone Saxatilis), Jessica Shannon Miller

Biological Sciences Theses & Dissertations

Mycobacteriosis is a fatal disease in fishes caused by acid-fast bacteria in the genus Mycobacterium. This disease impacts aquaculture, aquariums, and wild fishes. Unfortunately, there are currently no non-lethal diagnostic tests for mycobacterial infection in fishes. Type IV delayed type hypersensitivity (DTH) responses in vivo and in vitro are currently used for the non-lethal detection of mycobacterial infections in humans and in animals; however, there is little information available on DTH responses in fishes. In this work, we examine in vivo DTH response in Striped Bass (Morone saxatilis), an important U.S. Eastern seaboard fish species, experimentally …

Development And Evaluation Of Post-Production Oxygenation Techniques For The Augmentation Of Biochar, Matthew David Huff

Chemistry & Biochemistry Theses & Dissertations

Biochar is the carbon rich solid by-product of biomass pyrolysis. Interest in biochar can be broken down to several main categories: use as a carbon sequestration agent, use as a medium for the removal via adsorption of unwanted materials in wastewater, and as a soil amendment for the increase of cation exchange capacity (CEC). In order to generate a biochar which is stable enough for carbon sequestration, higher temperature pyrolysis must be used in order to ensure a lower O:C ratio in order to increase the half-life of biochar in soil. This dissertation addresses the evaluation of biochars made from …

Structure Of The Picornavirus Replication Platform: A Potential Drug Target For Inhibiting Virus Replication, Meghan Suzanne Warden

Chemistry & Biochemistry Theses & Dissertations

Picornaviruses are small, positive-stranded RNA viruses, divided into twelve different genera. Members of the Picornaviridae family cause a wide range of human and animal diseases including the common cold, poliomyelitis, foot and mouth disease, and dilated cardiomyopathy. The picornavirus genome is replicated via a highly conserved mechanism involving a presumed cloverleaf structure located at the 5’ noncoding region of the virus genome. The 5’ cloverleaf consists of three stem loops (B, C, and D) and one stem (A), which interact with a variety of virus and host cell proteins during replication. In this dissertation, human rhinovirus serotype 14 (HRV-14) SLB …

Molecular Candidates For Blocking The Transmission Of Vector-Borne Diseases, Ashish Naresh Vora

Biological Sciences Theses & Dissertations

Vector-borne diseases (VBDs) require urgent attention as they have a high mortality rate, with 700,000 people dying in a year as of 2017. So far, extremely few reliable vaccination strategies and solutions have emerged. Transmission blocking vaccines are one among many solutions available to manage the control of VBDs. These require identification of both vector and pathogen molecules that play important roles in the transmission, dissemination and establishment of VBDs. Our strategy is to characterize these candidates that play important roles in vector-host-pathogen interactions. This manuscript presents two such studies identifying the participation of two arthropod molecules in vector-host-pathogen interactions. …

Adaptive Methods For Point Cloud And Mesh Processing, Zinat Afrose

Computational Modeling & Simulation Engineering Theses & Dissertations

Point clouds and 3D meshes are widely used in numerous applications ranging from games to virtual reality to autonomous vehicles. This dissertation proposes several approaches for noise removal and calibration of noisy point cloud data and 3D mesh sharpening methods. Order statistic filters have been proven to be very successful in image processing and other domains as well. Different variations of order statistics filters originally proposed for image processing are extended to point cloud filtering in this dissertation. A brand-new adaptive vector median is proposed in this dissertation for removing noise and outliers from noisy point cloud data.

The major …