Digital Commons Network^™

Modelling Silicate - Nitrate - Ammonium Co-Limitation Of Algal Growth And The Importance Of Bacterial Remineralisation Based On An Experimental Arctic Coastal Spring Bloom Culture Study, Tobias R. Vonnahme, Martial Leroy, Silke Thoms, Dick Van Oevelen, H. Rodger Harvey, Svein Kristiansen, Rolf Gradinger, Christoph Voelker

OES Faculty Publications

Arctic coastal ecosystems are rapidly changing due to climate warming, which makes modelling their productivity crucially important to better understand future changes. System primary production in these systems is highest during the pronounced spring bloom, typically dominated by diatoms. Eventually the spring blooms terminate due to silicon or nitrogen limitation. Bacteria can play an important role for extending bloom duration and total CO2 fixation through ammonium regeneration. Current ecosystem models often simplify the effects of nutrient co-limitations on algal physiology and cellular ratios and neglect bacterial driven regeneration, leading to an underestimation of primary production. Detailed biochemistry- and cell-based models …

Hydrothermal Activity And Seismicity At Teahitia Seamount: Reactivation Of The Society Islands Hotspot?, Christopher R. German, Joseph A. Resing, Guangyu Xu, Isobel A. Yeo, Sharon L. Walker, Colin W. Devey, James W. Moffett, Gregory A. Cutter, Olivier Hyvernaud, Dominique Reymond

OES Faculty Publications

Along mid-ocean ridges, submarine venting has been found at all spreading rates and in every ocean basin. By contrast, intraplate hydrothermal activity has only been reported from five locations, worldwide. Here we extend the time series at one of those sites, Teahitia Seamount, which was first shown to be hydrothermally active in 1983 but had not been revisited since 1999. Previously, submersible investigations had led to the discovery of low-temperature (≤30°C) venting associated with the summit of Teahitia Seamount at ≤1500 m. In December 2013 we returned to the same site at the culmination of the US GEOTRACES Eastern South …

The Impact Of Eddies On Nutrient Supply, Diatom Biomass And Carbon Export In The Northern South China Sea, Yung-Yen Shih, Chin-Chang Hung, Sing-How Tuo, Huan-Jie Shao, Chun Hoe Chow, Francois L.L. Muller, Yuan-Hong Cai

OES Faculty Publications

We have investigated the effect of eddies (cold and warm eddies, CEs and WEs) on the nutrient supply to the euphotic zone and the organic carbon export from the euphotic zone to deeper parts of the water column in the northern South China Sea. Besides basic hydrographic and biogeochemical parameters, the flux of particulate organic carbon (POC), a critical index of the strength of the oceanic biological pump, was also measured at several locations within two CEs and one WE using floating sediment traps deployed below the euphotic zone. The POC flux associated with the CEs (85 ± 55 mg-C …

Stimuli-Responsive Gelators From Carbamoyl Sugar Derivatives And Their Responses To Metal Ions And Tetrabutylammonium Salts, Dan Wang, Anji Chen, Joedian Morris, Guijun Wang

Chemistry & Biochemistry Faculty Publications

Carbohydrate-based low molecular weight gelators (LMWGs) are interesting compounds with a variety of applications. In this research, a library of nineteen carbamate derivatives of N-acetyl-D-glucosamine were synthesized and characterized, and several derivatives were found to be effective LMWGs. They formed gels in pump oils as well as mixtures of water with ethanol or water with DMSO. The structures of the carbamoyl chains played an important role in the gelation properties, short chain aliphatic derivatives and phenyl carbamates formed gels in more solvents than certain aromatic and dimeric carbamates. The phenyl carbamate gelator was also selected for the encapsulation of …

Classification Models Of Idiopathic Pulmonary Fibrosis Patients, Mohammed Alqawba, Luis R. Rodriguez, Norou Diawara, Rebecca T. Beuschel, Maryann Kaler, Amisha V. Barochia, Stewart J. Levine, Steven D. Nathan, Geraldine Grant

Mathematics & Statistics Faculty Publications

Idiopathic pulmonary fibrosis (IPF) is a chronic and fatal interstitial lung disease with no current cure. Progression of IPF is difficult to predict as the clinical course can be highly variable and range from a rapidly deteriorating state to a relatively stable state, or may be characterized by a slow progressive decline. Therefore, the need for an accurate diagnosis and improved tools for monitoring and managing IPF is of paramount importance, all for understanding the mitochondrial structure and the function played in the IPF. Mitochondrial DNA copy number (MtDCN) has been correlated with mortality in IPF patients and is a …

Pathways To Success In Anatomy And Physiology At The Community College: The Role Of Prerequisite Courses, Staci B. Forgey, Mitchell R. Williams, Shana Pribesh

Educational Leadership & Workforce Development Faculty Publications

Gatekeeper courses such as Anatomy and Physiology are often referenced in discussions regarding the national shortage of persons in allied health professions. In an attempt to bolster access to STEM professions, some community colleges are mandating prerequisite courses such as Natural Sciences and/or General Biology for STEM gatekeeping courses. In this study, we examined which of these prerequisite courses helped students to pass Anatomy and Physiology and whether the courses are an additional barrier to STEM field completion. This was the first study to evaluate whether a prerequisite course was predictive of success in Anatomy and Physiology, and it contributes …

Family Structure Stability And Transitions, Parental Involvement, And Educational Outcomes, Shana L. Pribesh, Jane Smith Carson, Mikaela J. Dufur, Yuanyuan Yue, Kathy Morgan

Educational Leadership & Workforce Development Faculty Publications

The family environments children live in have profound effects on the skills, resources, and attitudes those children bring to school. Researchers studying family structure have found that children who live with two married, opposite-sex, biological parents, on average, have better educational outcomes than children living in alternate family structures, perhaps due to higher resources, lower stressors, or different selectivity patterns. Socioeconomic stratification plays a major role in family structure, with low-income families seeing more instability. We argue that the impact of family structure is attenuated by transitions in and out of family structures that may decrease a specific resource important …

Systematic Review Of Adaptive Learning Research Designs, Context, Strategies, And Technologies From 2009 To 2018, Florence Martin, Yan Chen, Robert L. Moore, Carl D. Westine

STEMPS Faculty Publications

This systematic review of research on adaptive learning used a strategic search process to synthesize research on adaptive learning based on publication trends, instructional context, research methodology components, research focus, adaptive strategies, and technologies. A total of 61 articles on adaptive learning were analyzed to describe the current state of research and identify gaps in the literature. Descriptive characteristics were recorded, including publication patterns, instructional context, and research methodology components. The count of adaptive learning articles published fluctuated across the decade and peaked in 2015. During this time, the largest concentration of adaptive learning articles appeared in Computers and Education. …

Combined Cognitive-Motivational Modules Delivered Via An Lms Increase Undergraduate Biology Grades, Jennifer Cromley, Tony Perez, Avi Kaplan, Ting Dai, Kyle Mara, Michael J. Balsai

STEMPS Faculty Publications

Students’ success in undergraduate Science, Technology, Engineering, and Mathematics (STEM) courses requires effective studying behavior, but also the motivation to enact it. Promoting students’ achievement in STEM has commonly focused on either study strategies (cognitive) or motivational interventions; we hypothesized that combinations of these would be more effective. Using a learning management system (LMS) for delivery, we iteratively developed and tested the effect of different combinations of one of the four cognition-focused with one of the three motivation-focused intervention modules. Participants were 3,092 undergraduate introductory biology students tested in 10 studies at three universities over 4 years. They were randomly …

Participatory Mapping, E-Participation, And E-Governance: Applications In Environmental Policy, Pragati Rawat, Juita-Elena (Wie) Yusuf

School of Public Service Faculty Publications

This chapter focuses on participatory mapping as an e-governance tool to facilitate public participation. Public participation is a key component of democratic governance, and there is a growing reliance on digital government tools such as the internet and social networking sites and geographic information systems (GIS). This chapter focuses on public engagement using information and communication technology, namely participatory mapping, known by a variety of terms such as participatory GIS (PGIS), public participation GIS (PPGIS), and voluntary GIS. While the analysis involves use of participatory mapping related to environmental issues, the chapter brings together seminal work from various fields of …

Analysis Of Iron Sources In Antarctic Continental Shelf Waters, Michael S. Dinniman, Pierre St-Laurent, Kevin R. Arrigo, Eileen E. Hofmann, Gert L. Van Dijken

CCPO Publications

Previous studies showed that satellite‐derived estimates of chlorophyll a in coastal polynyas over the Antarctic continental shelf are correlated with the basal melt rate of adjacent ice shelves. A 5‐km resolution ocean/sea ice/ice shelf model of the Southern Ocean is used to examine mechanisms that supply the limiting micronutrient iron to Antarctic continental shelf surface waters. Four sources of dissolved iron are simulated with independent tracers, assumptions about the source iron concentration for each tracer, and an idealized summer biological uptake. Iron from ice shelf melt provides about 6% of the total dissolved iron in surface waters. The contribution from …

Spillover Of Sea Scallops From Rotational Closures In The Mid-Atlantic Bight (United States), Deborah R. Hart, Daphne M. Monroe, Joseph C. Caracappa, Dale Haidvogel, Burton V. Shank, David B. Rudders, John M. Klinck, Eileen E. Hofmann, Eric N. Powell

CCPO Publications

We examined evidence for larval spillover (increased recruitment outside the closures) of Atlantic sea scallops (Placopecten magellanicus) due to rotational closures in the Mid-Atlantic Bight using a 40-year fisheries survey time series and a larval transport model. Since the first closure of the Hudson Canyon South (HCS) area in 1998, mean recruitment in the two areas directly down-current from this closure, Elephant Trunk (ET) and Delmarva (DMV), increased significantly by factors of about 7 and 2, respectively. Stock–recruit plots indicate that low biomasses in HCS were associated with reduced mean recruitment in ET and DMV. Simulations indicate that larvae spawned …

The “Challenge" Of Depletion: Why The Oyster Fishery Is Not Self-Regulating, Eric N. Powell, John M. Klinck, Leanne M. Poussard

CCPO Publications

The possibility that the economics of the oyster fishery impose a self-limitation on overharvesting has been proffered on occasion. The inefficiency of harvesting by the fishery has been evaluated and estimates of the exploitation rate permissible under conditions of maximum sustainable yield have been obtained in previous studies. The question becomes to what extent does the inefficiency of harvest interact with the economics of the fishery to compromise ready detection of overfishing? This study explores the possibility that the constraint of economics on the fishery occurs at oyster exploitation rates that are higher than maximum sustainable yield, leading ineluctably to …

The Artificial University: Decision Support For Universities In The Covid-19 Era, Wesley J. Wildman, Saikou Y. Diallo, George Hodulik, Andrew Page, Andreas Tolk, Neha Gondal

VMASC Publications

Operating universities under pandemic conditions is a complex undertaking. The Artificial University (TAU) responds to this need. TAU is a configurable, open-source computer simulation of a university using a contact network based on publicly available information about university classes, residences, and activities. This study evaluates health outcomes for an array of interventions and testing protocols in an artificial university of 6,500 students, faculty, and staff. Findings suggest that physical distancing and centralized contact tracing are most effective at reducing infections, but there is a tipping point for compliance below which physical distancing is less effective. If student compliance is anything …

Phenotypic Variation Of Partridge Pea (Chamaecrista Fasciculata) From Mississippi Persists In A Common Garden, Lisa E. Wallace, Mahboubeh Hosseinalizadeh-Nobarinezhad, Robert Coltharp

Biological Sciences Faculty Publications

Intraspecific phenotypic variation occurs for many different reasons and understanding its basis has applications in taxonomy, ecology, and evolution. Chamaecrista fasciculata (partridge pea) is a widely distributed species with much phenotypic variation and varied interactions with other species in communities where it grows. Botanists have often noted that phenotypic variation in some traits of this species increases from north to south in the eastern United States. In this study, we grew seeds collected from five Mississippi populations in a common greenhouse environment to determine if the observed variation in leaf and stem traits is maintained in this environment. Interpopulation variation …

Standardized Short-Term Acute Heat Stress Assays Resolve Historical Differences In Coral Thermotolerance Across Microhabitat Reef Sites, Christian R. Voolstra, Carol Buitrago-López, Gabriela Perna, Anny Cárdenas, Benjamin C. C. Hume, Nils Rädecker, Daniel J. Barshis

Biological Sciences Faculty Publications

Coral bleaching is one of the main drivers of reef degradation. Most corals bleach and suffer mortality at just 1–2°C above their maximum monthly mean temperatures, but some species and genotypes resist or recover better than others. Here, we conducted a series of 18‐hr short‐term acute heat stress assays side‐by‐side with a 21‐day long‐term heat stress experiment to assess the ability of both approaches to resolve coral thermotolerance differences reflective of in situ reef temperature thresholds. Using a suite of physiological parameters (photosynthetic efficiency, coral whitening, chlorophyll a , host protein, algal symbiont counts, and algal type association), we assessed …

Workflow For Constructing Social Networks From Automated Telemetry Systems, Daizaburo Shizuka, Sahas Barve, Allison Johnson, Eric L. Walters

Biological Sciences Faculty Publications

1. Advances in datalogging technologies have provided a way to monitor the movement of individual animals at unprecedented spatial and temporal scales, both large and small. When used in conjunction with social network analyses, these data can provide insight into fine scale associative behaviors. The variety of technologies demand continuous progress in workflows to translate data streams from automated systems to social networks, based on biologically relevant metrics.

2. Here we present a workflow for generating flexible association matrices from automated radio-telemetry data that can be parsed into both spatial and temporal dimensions. These can then be used to generate …

Electrotransfer Of Il-15/Il-15rα Complex For The Treatment Of Established Melanoma, Shawna A. Shirley, Cathryn G. Lundberg, Richard Heller

Bioelectrics Publications

Gene electrotransfer (GET) is a safe, reliable, and effective method of delivering plasmid DNA (pDNA) to solid tumors. GET has been previously used to deliver interleukin-15 (IL-15) to mouse melanoma, resulting in long-term tumor regression and the survival of a percentage of treated animals after challenge. To enhance this effect, we evaluated modulating the expression levels of IL-15 and co-expressing its receptor, IL-15Rα. GET was used to deliver plasmids encoding IL-15 and IL-15Rα to established B16.F10 tumors on days 0, 4, and 7. Two delivery protocols that yielded different expression profiles were utilized. Mice that were tumor-free for 50 days …

Melatonin For The Treatment Of Sepsis: The Scientific Rationale, Ruben Manuel Luciano Colunga Biancatelli, Max Berrill, Yassen H. Mohammed, Paul E. Marik

Bioelectrics Publications

Sepsis affects 30 million people worldwide, leading to 6 million deaths every year (WHO), and despite decades of research, novel initiatives are drastically needed. According to the current literature, oxidative imbalance and mitochondrial dysfunction are common features of septic patients that can cause multiorgan failure and death. Melatonin, alongside its traditionally accepted role as the master hormonal regulator of the circadian rhythm, is a promising adjunctive drug for sepsis through its anti-inflammatory, antiapoptotic and powerful antioxidant properties. Several animal models of sepsis have demonstrated that melatonin can prevent multiorgan dysfunction and improve survival through restoring mitochondrial electron transport chain (ETC) …

Diagnosing Mild Traumatic Brain Injury Using Saliva Rna Compared To Cognitive And Balance Testing, Steven D. Hicks, Cayce Onks, Raymond Y. Kim, Kevin J. Zhen, Jayson Loeffert, Andrea C. Loeffert, Robert P. Olympia, Gregory Fedochak, Samantha Devita, Aakanksha Rangnekar, John Leddy, Mohammad N. Haider, Zofia Gagnon, Callan D. Mcloughlin, Matthew Badia, Jason Randall, Miguel Madeira, Aaron M. Yengo-Kahn, Justin Wenzel, Matthew Heller, Hallie Zwibel, Aaron Roberts, Samantha Johnson, Chuck Monteith, Michael N. Dretsch, Thomas R. Campbell, Rebekah Mannix, Christopher Neville, Frank Middleton

Rehabilitation Sciences Faculty Publications

BACKGROUND: Early, accurate diagnosis of mild traumatic brain injury (mTBI) can improve clinical outcomes for patients, but mTBI remains difficult to diagnose because of reliance on subjective symptom reports. An objective biomarker could increase diagnostic accuracy and improve clinical outcomes. The aim of this study was to assess the ability of salivary noncoding RNA (ncRNA) to serve as a diagnostic adjunct to current clinical tools. We hypothesized that saliva ncRNA levels would demonstrate comparable accuracy for identifying mTBI as measures of symptom burden, neurocognition, and balance.

METHODS: This case‐control study involved 538 individuals. Participants included 251 individuals with mTBI, enrolled …

Saliva Microrna Biomarkers Of Cumulative Concussion, Steven D. Hicks, Robert P. Olympia, Cayce Onks, Raymond Y. Kim, Kevin J. Zhen, Gregory Fedorchak, Samantha Devita, Aakanksha Rangnekar, Matthew Heller, Hallie Zwibel, Chuck Monteith, Zofia Gagnon, Callan D. Mcloughlin, Jason Randall, Miguel Madeira, Thomas R. Campbell, Elise Fengler, Michael N. Dretsch, Christopher Neville, Frank A. Middleton

Rehabilitation Sciences Faculty Publications

Recurrent concussions increase risk for persistent post-concussion symptoms, and may lead to chronic neurocognitive deficits. Little is known about the molecular pathways that contribute to persistent concussion symptoms. We hypothesized that salivary measurement of microribonucleic acids (miRNAs), a class of epitranscriptional molecules implicated in concussion pathophysiology, would provide insights about the molecular cascade resulting from recurrent concussions. This hypothesis was tested in a case-control study involving 13 former professional football athletes with a history of recurrent concussion, and 18 age/sex-matched peers. Molecules of interest were further validated in a cross-sectional study of 310 younger individuals with a history of no …

Editorial For The Special Issue On Micro/Nano-Chip Electrokinetics, Volume Iii, Shizhi Qian, Xiangchun Xuan

Mechanical & Aerospace Engineering Faculty Publications

No abstract provided.

Survival Of Enterococcus FaeciumIn Turkey Litter Under Different Temperature And Moisture Combinations, Steven G. Mcbride, Benjamin Holland, Pradeep Vasudevan, Joanna B. Mott

Virginia Journal of Science

Untreated poultry litter introduces a substantial load of fecal pathogens to the environment, impacting agriculture, public health and ecosystem function. There is substantial evidence that temperature and moisture are the primary drivers of fecal bacteria survival across ecosystems. However, both temperature and moisture effects have been shown to be modulated by the matrix in which the fecal bacteria are living. This context dependence highlights the importance of understanding fecal bacteria survival in a variety of matrices in order to implement effective waste management plans. In this study, we determined the survival patterns of Enterococcus faecium in post-use turkey litter under …

Guiding Students To Success: A Systematic Review Of Research On Guided Notes As An Instructional Strategy From 2009-2019, Bryan Biggers, Tian Luo

STEMPS Faculty Publications

Guided notes were introduced decades ago, but there is still debate over their efficacy in improving student outcomes. The purpose of this study is to examine peer-reviewed research on guided notes for adult learners in general populations since 2009, understanding the effects of guided notes on student learning, the knowledge and content areas supported by guided notes, and the impact of modality. Results of the 22 included studies indicate that students perceive guided notes in a positive light, and guided notes improve results in certain knowledge domains especially with complex content. However, modality does not influence the efficacy of guided …

Tunable-Focus Liquid Lens Through Charge Injection, Shizhi Qian, Wenxiang Shi, Huai Zheng, Zhaohui Liu

Mechanical & Aerospace Engineering Faculty Publications

Liquid lenses are the simplest and cheapest optical lenses, and various studies have been conducted to develop tunable-focus liquid lenses. In this study, a simple and easily implemented method for achieving tunable-focus liquid lenses was proposed and experimentally validated. In this method, charges induced by a corona discharge in the air were injected into dielectric liquid, resulting in “electropressure” at the interface between the air and the liquid. Through a 3D-printed U-tube structure, a tunable-focus liquid lens was fabricated and tested. Depending on the voltage, the focus of the liquid lens can be adjusted in large ranges (−∞ to −9 …

The Power Of Open: Benefits, Barriers, And Strategies For Integration Of Open Educational Resources, Tian Luo, Kirsten Hostetler, Candice Freeman, Jill Stefaniak

STEMPS Faculty Publications

Open Educational Resources (OER) are becoming a significant, mission-driven trend within educational literature. To help address rising costs, instructors and designers are looking to OER to effectively replace traditional instructional content, which requires more than just identify and replace. Drawing from 51 OER studies conducted in countries across the five continents, this systematic literature review explored the empirical themes evident in the current research on a global scale. This review found (1) discoverability, sustainability, and remixing are significant barriers that stand in the way of OER disrupting traditional textbook models; (2) there is no significant difference in learning outcomes when …

Patterns Of Genetic Diversity In Highly Invasive Species: Cogongrass (Imperata Cylindrica) Expansion In The Invaded Range Of The Southern United States (Us), Rima D. Lucardi, Lisa E. Wallace, Gary N. Ervin

Biological Sciences Faculty Publications

The spatial expansions of invasive organisms in the novel range are generally expected to follow an isolation-by-distance relationship (IBD) if the invasion is biologically driven; however, many invasions are facilitated anthropogenically. This research focused on the extant expansion patterns of cogongrass (Imperata cylindrica). Cogongrass is a widespread invasive species throughout the southern United States (US). Patterns of infestation vary among US states. Cogongrass is pyrogenic, and its invasion threatens softwood (Pinus spp.) plantations, a substantial economic market for this US region. Over 600 individuals were sampled from seven invaded US states, using amplified fragment length polymorphisms (AFLPs) …

Apparent Resilience To Fire Of Native Bee (Hymenoptera: Apoidea) Communities From Upland Longleaf Pine Forests In Louisiana And Mississippi, Sara A. Simmons, Janice L. Bossart

Biological Sciences Faculty Publications

Controlled burning is an essential tool for restoration and management of Pinus palustris (Longleaf Pine) habitats, yet effects of controlled burning on insect species, including pollinators, are rarely considered in conservation planning. We used blue vane traps to sample native bees (Hymenoptera: Apoidea) at recently burned and unburned sites in 2 Longleaf Pine upland forests in Mississippi and Louisiana. Our objective was to quantify short-term effects of controlled burns given fire-return intervals of 1-2 years are now regularly employed to manage Longleaf Pine woodlands. We sampled during 2016 and 2017 and collected 1777 native bees, representing 43 species. Recent fire …

Correlates Of Bird Collisions With Buildings Across Three North American Countries, Jared A. Elmore, Stephen B. Hager, Bradley J. Cosentino, Nastasha Hagemeyer, Eric Walters, Scott R. Loss, Et Al.

Biological Sciences Faculty Publications

Collisions with buildings cause up to 1 billion bird fatalities annually in North America. Bird-building collisions have recently received increased conservation, research, and policy attention. However, efforts to reduce collisions would benefit from studies conducted at large spatial scales across multiple study sites, with standardized methods, and with consideration of species- and life history-related variation and correlates of collisions. We addressed these research needs with a coordinated data collection effort at 40 sites across North America. We estimated collision vulnerability for 40 bird species by accounting for their North American population abundance, distribution overlap with study sites, and sampling effort. …

A Survey Of The Reptiles And Amphibians At The University Of Georgia Costa Rica Field Station In San Luis De Monteverde, Costa Rica, John David Curlis, Elliot Convery Fisher, W. Kody Muhic, James Moy, Martha Garro-Cruz, José Joaquín Montero-Ramírez

Biological Sciences Faculty Publications

Reptiles and amphibians are experiencing declines across the globe. In Monteverde, Costa Rica, these declines and their underlying causes have been relatively well studied since the early 1990s, and many protected areas have been set aside to conserve these species. However, thorough surveys of the herpetofaunal diversity in these areas have been scarce over the last 20 years. We conducted a survey of all reptile and amphibian species at the University of Georgia Costa Rica (UGACR), a field station in San Luis de Monteverde. Herein, we present an annotated checklist of the 48 species (35 reptiles and 13 amphibians) that …