Digital Commons Network^™

Multiple Stable Reference Points In Oyster Populations: Biological Relationships For The Eastern Oyster (Crassostrea Virginica) In Delaware Bay, Eric N. Powell, John M. Klinck, Kathryn A. Ashton-Alcox, John N. Kraeuter

CCPO Publications

In the first of two companion papers, a 54-yr time series for the oyster population in the New Jersey waters of Delaware Bay was analyzed to develop biological relationships necessary to evaluate maximum sustainable yield (MSY) reference points and to consider how multiple stable points affect reference point-based management. The time series encompassed two regime shifts, one circa 1970 that ushered in a 15-yr period of high abundance, and a second in 1985 that ushered in a 20-yr period of low abundance. The intervening and succeeding periods have the attributes of alternate stable states. The biological relationships between abundance, recruitment, …

Enso And Variability Of The Antarctic Peninsula Pelagic Marine Ecosystem, Valerie J. Loeb, Eileen E. Hofmann, John M. Klinck, Osmund Holm-Hansen, Warren B. White

CCPO Publications

The West Antarctic Peninsula region is an important source of Antarctic krill (Euphausia superba) in the Southern Ocean. From 1980-2004 abundance and concentration of phytoplankton and zooplankton, krill reproductive and recruitment success and seasonal sea ice extent here were significantly correlated with the atmospheric Southern Oscillation Index and exhibited three- to five-year frequencies characteristic of El Nino-Southern Oscillation (ENSO) variability. This linkage was associated with movements of the Southern Antarctic Circumpolar Current Front and Boundary, a changing influence of Antarctic Circumpolar Current and Weddell Sea waters, and eastward versus westward flow and mixing processes that are consistent with forcing by …

Southern Ocean Globec Research And The Future, Eileen Hofmann

CCPO Publications

(First paragraph) The International Global Ocean Ecosystems Dynamics (GLOBEC) Programme will end in early 2010, after almost 20 years. GLOBEC science has provided fundamental changes in our understanding of the scales of interactions in marine ecosystems, alternative views of marine food webs, and the influence of humans in marine ecosystem processes. Since Southern Ocean GLOBEC (SO GLOBEC) was one of the regional research programmes it is appropriate to reflect on i) its specific contributions, ii) how these might guide future Southern Ocean research, and iii) the key gaps for our future understanding of Southern Ocean ecosystems and the impact that …

Profiles Of Ocean Surface Heating (Posh): A New Model Of Upper Ocean Diurnal Warming, Chelle L. Gentemann, Peter J. Minnett, Brian Ward

CCPO Publications

Shipboard radiometric measurements of diurnal warming at the ocean surface and profiles through the diurnal thermocline were utilized to assess the temporal and vertical variability and to develop a new physics-based model of near-surface warming. The measurements and modeled diurnal warming were compared, with the goal of comprehensively evaluating differences between the data and model results. On the basis of these results, the diurnal model was refined while attempting to maintain agreement with the measurements. Simplified bulk models commonly do not provide information on the vertical structure within the warm layer, but this new model predicts the vertical temperature profile …

Water Treatment: Keeping It Pure, Petros Katsioloudis

STEMPS Faculty Publications

The article discusses the importance of water treatment in providing quality and safe drinking water. A historical background of the U.S. federal regulation of drinking water quality is presented. It was found by the Public Health Service in 1969 that only 60 percent of the systems surveyed delivered water that met all the Public Health Service standards. Filtration and chlorination are also cited as an effective treatment techniques for protecting U.S. water supplies from harmful microbes. An overview of the process of water treatment is presented.

Optimizing Computer-Aided Colonic Polyp Detection For Ct Colonography By Evolving The Pareto Front, Jiang Li, Adam Huang, Jack Tao, Jiamin Liu, Robert L. Van Uitert, Nicholas Petrick, Ronald Summers

Electrical & Computer Engineering Faculty Publications

A multiobjective genetic algorithm is designed to optimize a computer-aided detection (CAD) system for identifying colonic polyps. Colonic polyps appear as elliptical protrusions on the inner surface of the colon. Curvature-based features for colonic polyp detection have proved to be successful in several CT colonography (CTC) CAD systems. Our CTC CAD program uses a sequential classifier to form initial polyp detections on the colon surface. The classifier utilizes a set of thresholds on curvature-based features to cluster suspicious colon surface regions into polyp candidates. The thresholds were previously chosen experimentally by using feature histograms. The chosen thresholds were effective for …

Influence Of Irradiance And Iron On The Growth Of Colonial Phaeocystic Antarctica: Implications For Seasonal Bloom Dynamics In The Ross Sea, Antarctica, Nathan S. Garcia, Peter N. Sedwick, Giacomo R. Ditullio

OES Faculty Publications

Laboratory culture experiments were used to investigate the growth rate of colonial Phaeocystis anarctica as a function of irradiance and dissolved iron concentration. The experiments were conducted with a P. antarctica strain isolated from the southern Ross Sea, Antarctica, and made use of natural, low-iron (P. antarctica attained an average maximum cell-specific growth rate of 0.37 d^-1at an irradiance of 68 μE m^-2s^-1, above which growth rates decreased to 0.27 d^-1 at an irradiance of 314 μE m^-2s^-1. The dependence of growth rate on ambient dissolved iron concentration was …

Cross-Basin Comparison Of Phosphorus Stress And Nitrogen Fixation In Trichodesmium, Annette M. Hynes, P. Dreux Chappell, Sonya T. Dyhrman, Scott C. Doney, Eric A. Webb

OES Faculty Publications

We investigated the phosphorus (P) status and N₂ fixation rates of Trichodesmium populations from the North Pacific, western South Pacific, and western North Atlantic. Colonies of Trichodesmium were collected and analyzed for endogenous alkaline phosphatase (AP) activity using enzyme-labeled fluorescence ( ELF) and for nitrogenase activity using acetylene reduction. AP hydrolyzes dissolved inorganic phosphate (DIP) from dissolved organic phosphorus and is active in Trichodesmium colonies experiencing P stress. Across multiple stations in the subtropical North and South Pacific, there was low to moderate ELF labeling in Trichodesmium, although labeling was present in other taxa. In contrast, Trichodesmium ELF …

On The Interpretation Of Caribbean Paleo-Temperature Reconstructions During The Younger Dryas, Xiuquan Wan, Ping Chang, R. Saravanan, Rong Zhang, Matthew W. Schmidt

OES Faculty Publications

A conundrum exists regarding whether the sea-surface temperatures decreased or increased over the southern Caribbean and the western Tropical Atlantic region during the Younger Dryas when the North Atlantic cooled substantially and the Atlantic thermohaline circulation was weakened significantly. Despite the proximity of core locations, some proxy reconstructions record a surface cooling, while others indicate a warming. We suggest that this seemingly paradoxical finding may, at least partially, be attributed to the competing physical processes that result in opposing signs of temperature change in the region in response to weakened North Atlantic meridional overturning circulation. Our coupled ocean-atmosphere model experiments …

Cirene Air-Sea Interactions In The Seychelles-Chagos Thermocline Ridge Region, J. Vialard, J. P. Duvel, M. J. Mcphaden, P. Bouruet-Aubertot, B. Ward, E. Key, D. Bourras, R. Weller, P. Minnett, A. Weil

OES Faculty Publications

A field experiment in the southwestern Indian Ocean provides new insights into ocean-atmosphere interactions in a key climatic region.

Early Neoproterozoic Origin Of The Metazoan Clade Recorded In Carbonate Rock Texture: Reply, Fritz Neuweiler, Elizabeth C. Turner, David J. Burdige

OES Faculty Publications

We (Neuweiler et al., 2009) used scanning electron microscopic, fluorescence spectroscopic, fluorescence microscopic, and thin-section analytical work from modern, Cretaceous, Silurian, and early Neoproterozoic reefal material to make a geological case for an early Neoproterozoic origin of animals. In a modern analogue for ancient petrographic textures, degradative calcification of the extracellular collagenous matrix (ECM) of a modern siliceous sponge can be directly observed (Neuweiler et al., 2007).

Thin Layer Formation During Runaway Stratification In The Tidally Dynamic San Francisco Estuary, Alexander B. Bochdansky, Stephen M. Bollens

OES Faculty Publications

During the course of a year, we repeatedly collected high-resolution vertical fluorometer data timed to coincide with a specific state during the tidal cycle. The time (end of the ebb during neap tide) and the location (a deep channel half-way between the Golden Gate and the point of tidally averaged bottom salinity of 2 psu) were chosen with the goal to observe runaway stratification. We consistently found at least one pronounced chlorophyll peak in the water column; however, the vertical location of these peaks varied within three types including surface, bottom and subsurface maxima. Our results showed that heterogeneity of …

A Robust, Multisite Holocene History Of Drift Ice Off Northern Iceland: Implications For North Atlantic Climate, John T. Andrews, Dennis A. Darby, Dennis Eberle, Anne E. Jennings, Matthias Moros, Astrid Ogilvie

OES Faculty Publications

An important indicator of Holocene climate change is provided by evidence for variations in the extent of drift ice. A proxy for drift ice in Iceland waters is provided by the presence of quartz. Quantitative xray diffraction analysis of the < 2 mm sediment fraction was undertaken on 16 cores from around Iceland. The quartz weight (wt.)% estimates from each core were integrated into 250-yr intervals between −0.05 and 11.7 cal. ka BP. Median quartz wt.% varied between 0.2 and 3.4 and maximum values ranged between 2.8 and 11.8 wt.%. High values were attained in the early Holocene and minimum values were reached 6–7 cal. ka BP. Quartz wt.% then rose steadily during the late Holocene. Our data exhibit no correlation with counts on haematite-stained quartz (HSQ) grains from VM129-191 west of Ireland casting doubt on the ice-transport origin. A pilot study on the provenance of Fe oxide grains in two cores that cover the last 1.3 and 6.1 cal. ka BP indicated a large fraction of the grains between 1 and 6 cal. ka BP were from either Icelandic or presently unsampled sources. However, there was a dramatic increase in Canadian and Russian sources from the Arctic Ocean ~1 cal. ka BP. These data may indicate the beginning of an Arctic Oscillation-like climate mode.

Superfluid Turbulence From Quantum Kelvin Wave To Classical Kolmogorov Cascades, Jeffrey Yepez, George Vahala, Linda L. Vahala, Min Soe

Electrical & Computer Engineering Faculty Publications

The main topological feature of a superfluid is a quantum vortex with an identifiable inner and outer radius. A novel unitary quantum lattice gas algorithm is used to simulate quantum turbulence of a Bose-Einstein condensate superfluid described by the Gross-Pitaevskii equation on grids up to 5760³. For the first time, an accurate power-law scaling for the quantum Kelvin wave cascade is determined: k^-3. The incompressible kinetic energy spectrum exhibits very distinct power-law spectra in 3 ranges of k space: a classical Kolmogorov k^-(5/3) spectrum at scales greater than the outer radius of individual quantum vortex …

Quantum Algorithm For Bose-Einstein Condensate Quantum Fluid Dynamics: Twisting Of Filamentary Vortex Solitons Demarcated By Fast Poincare Recursion, Jeffrey Yepez, George Vahala, Linda L. Vahala

Electrical & Computer Engineering Faculty Publications

The dynamics of vortex solitons is studied in a BEC superfluid. A quantum lattice-gas algorithm (measurementbased quantum computation) is employed to examine the dynamical behavior vortex soliton solutions of the Gross-Pitaevskii equation (ø⁴ interaction nonlinear Schroedinger equation). Quantum turbulence is studied in large grid numerical simulations: Kolmogorov spectrum associated with a Richardson energy cascade occurs on large flow scales. At intermediate scales, a new k^-6 power law emerges, due to vortex filamentary reconnections associated with Kelvin wave instabilities (vortex twisting) coupling to sound modes and the exchange of intermediate vortex rings. Finally, at very small spatial scales a …

Electronic And Structural Properties Of Molybdenum Thin Films As Determined By Real Time Spectroscopic Ellipsometry, J. D. Walker, H. Khatri, V. Ranjan, Jian Li, R. W. Collins, S. Marsillac

Electrical & Computer Engineering Faculty Publications

Walker, J.D., Khatri, H., Ranjan, V., Li, J., Collins, R.W., & Marsillac, S. (2009). Electronic and structural properties of molybdenum thin films as determined by real-time spectroscopic ellipsometry. Applied Physics Letters, 94(14). doi: 10.1063/1.3117222

Potential Export Of Unattached Benthic Macroalgae To The Deep Sea Through Wind Driven Langmuir Circulation, H. M. Dierssen, Richard C. Zimmerman, Lisa A. Drake, David J. Burdige

OES Faculty Publications

Carbon export to the deep sea is conventionally attributed to the sinking of open ocean phytoplankton. Here, we report a Langmuir supercell event driven by high winds across the shallow Great Bahama Bank that organized benthic non-attached macroalgae, Colpomenia sp., into visible windrows on the seafloor. Ocean color satellite imagery obtained before and after the windrows revealed a 588 km² patch that rapidly shifted from highly productive macroalgae to bare sand. We assess a number of possible fates for this macroalgae and contend that this event potentially transported negatively buoyant macroalgae to the deep Tongue of the Ocean …

Anthropogenic Osmium In Rain And Snow Reveals Global-Scale Atmospheric Contamination, Cynthia Chen, Peter N. Sedwick, Mukul Sharma

OES Faculty Publications

Osmium is one of the rarer elements in seawater, with typical concentration of ≈10 x 10^-15 g g^-1 ( 5.3 x 10^-14 mol kg^-1. The osmium isotope composition (¹⁸⁷Os/¹⁸⁸Os ratio) of deep oceans is 1.05, reflecting a balance between inputs from continental crust (≈ 1.3) and mantle/cosmic dust (≈ 0.13). Here, we show that the ¹⁸⁷Os/¹⁸⁸Os ratios measured in rain and snow collected around the world range from 0.16 to 0.48, much lower than expected (>1), but similar to the isotope composition of ores (approximate to 0.2) …

Peptide Hydrolysis And The Uptake Of Dipeptides By Phytoplankton, Margaret R. Mulholland, Cindy Lee

OES Faculty Publications

Rates of peptide hydrolysis (using the fluorescent substrate, lucifer yellow anhydride-labeled tetra-alanine) and dipeptide uptake (using dually labeled, ¹⁵N and ¹³C, dialanine) were measured in phytoplankton cultures and in natural populations during algal blooms dominated by one or two taxa. During most sampling events, both peptide hydrolysis and dipeptide uptake were greatest in the size fraction containing the dominant phytoplankter, suggesting that phytoplankton contribute substantially to or may even dominate observed extracellular peptide hydrolysis and dipeptide uptake in the environment. These are the first data suggesting that dipeptides may be taken up directly by phytoplankton and this may …

Spatial Variation In Otolith Chemistry Of Atlantic Croaker Larvae In The Mid-Atlantic Bight, Jason J. Schaffler, Christian S. Reiss, Cynthia M. Jones

OES Faculty Publications

Larval Atlantic croaker Micropogonias undulatus (1 to 7 mm in standard length) were collected on the east coast of the United States from North Carolina to Delaware during 2000. We defined 3 water-mass boundaries for potential groups of spawning Atlantic croaker using temperature and salinity measured at each sampling station. We tested the hypothesis that distinct otolith chemistries existed among 3 groups of larval Atlantic croaker collected from these water masses using solution-based inductively coupled plasma-mass spectrometry. Multivariate analysis of variance indicated that otolith chemistry differed significantly among water masses. Using a quadratic discriminant function, we were able to correctly …

Geobiology: Evidence For Early Life On Earth And The Search For Life On Other Planets, Sherry L. Cady, Nora Noffke

OES Faculty Publications

Extensive research efforts in the subdisciplinary field of geobiology have focused on the interactions between Earth and life through time. As a consequence, gaps in our knowledge of Earth’s history are closing, and the search for life beyond Earth is expanding. A few examples of geobiology studies designed to advance our understanding of life on early Earth and to improve the chances of finding life on other planets are provided to highlight recent developments and research areas that are on the verge of new discoveries.

Rapid Sensor Technology: A Risk And System Complexity Analyses Of Early Detection Of Influenza-Like-Illnesses, Cesar Ariel Pinto, Ipek Bozkurt

Engineering Management & Systems Engineering Faculty Publications

The development of effective and reliable methods to defend the nation against biological terrorism remains an urgent challenge to researchers in the areas of risk, bio-defense, public health, and emergency medicine. The emerging threat of the avian flu pandemic also highlights the unpreparedness of our nation's health care system to meet a highly contagious and infectious disease outbreak. The implementation of a rapid sensor technology for early detection of influenza-like-illness provides possible opportunities, as well as problems. Bounding and defining such a complex problem is one of the first challenges this research addresses. Approaching this problem from various perspectives such …

Sensitivity Analysis Framework For Large And Complex Simulation Models, Ghaith Rabadi, Shannon Bowling, Charles Keating, Resit Unal

Engineering Management & Systems Engineering Faculty Publications

In this paper, a framework for conducting Sensitivity Analysis (SA) on large and complex simulation models is introduced. The framework consists of components that are designed to make the SA a systematic process that is easy to manage and follow by simulation analysts and practitioners. Unlike local SA (one-variable-at-a-time SA), the method presented here is variance-based and it is rooted in the field of Design of Experiments (DoE) where Input Variables are varied and Output Variables are measured. Based on the DoE results, a risk scoring system is developed to identify the sensitivity of the Input Variables, and as a …

The Impact Of Communication Medium On Team Performance Patterns, Pilar Pazos, Mario G. Beruvides

Engineering Management & Systems Engineering Faculty Publications

The increased impact of globalization and rapidly changing technologies are some of the biggest challenges facing 21st century organizations. Remote teams supported through computer-based systems have been identified as a key lever to help organizations adapt to this turbulent environment. This study sheds some light on how teams perform and adapt by evaluating performance and synergy over time for teams in two different settings: computer supported and face-to-face. Participants in the study were randomly assigned either to a computer-supported or a face-to face group. Each group met over three sessions to perform a series of tasks that were evaluated using …

Export Of Terrestrial Dissolved Organic Matter Along A River To Ocean Transect Of The Lower Chesapeake Bay Investigated By Advanced Analytical Techniques, Rachel Leigh Sleighter

Chemistry & Biochemistry Theses & Dissertations

Ultrahigh resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) has proved essential for the complete separation of the thousands of peaks present in natural organic matter (NOM), a complex assemblage of organic molecules present in water, soils, and sediments. An improved understanding of its composition is crucial to understand how pollutants interact with NOM and how NOM cycles through global carbon cycles.

Optimizing the acquisition and handling of the FTICR mass spectra is the first step to obtaining high quality data. A simple method to internally calibrate the peaks in the complex spectra, using naturally present fatty …

Light Scattering In Ultracold High Density Rubidium Vapor, Salim Balik

Physics Theses & Dissertations

Recent developments in laser cooling and trapping opened the door to a world full of new opportunities for research in atomic, molecular and optical physics as well as condensed matter physics. It became possible to do experiments under conditions that are hard to achieve in condensed matter systems but recently have been observed in atomic systems. Bose Einstein Condensation, the Mott insulator transition, and superfluidity are examples of such achievements. Another considerable interest to both condensed matter and atomic physics is Anderson localization of light. The localization phenomenon is named after P. W. Anderson who suggested the possibility of localization …

Measurement Of Semi-Inclusive Π+ Electroproduction Off The Proton, Clas Collaboration, M. J. Amaryan, H. Bagdasaryan, M. Bektasoglu, S. Bültmann, K. V. Dharmawardane, G. E. Dodge, G. Gavalian, N. Guler, C. E. Hyde-Wright, A. Klein, A. V. Klimenko, S. E. Kuhn, M. R. Niroula, L. M. Qin, L. B. Weinstein, J. Zhang

Physics Faculty Publications

Semi-inclusive π+ electroproduction on protons has been measured with the CLAS detector at Jefferson Lab. The measurement was performed on a liquid-hydrogen target using a 5.75 GeV electron beam. The complete five-fold differential cross sections were measured over a wide kinematic range including the complete range of azimuthal angles between hadronic and leptonic planes, ϕ , enabling us to separate the ϕ-dependent terms. Our measurements of the ϕ -independent term of the cross section at low Bjorken x were found to be in fairly good agreement with pQCD calculations. Indeed, the conventional current fragmentation calculation can account for almost all …

Interconnections Of Nonlinear Systems Driven By L₂-Itô Stochastic Processes, Luis A. Duffaut Espinosa

Electrical & Computer Engineering Theses & Dissertations

Fliess operators have been an object of study in connection with nonlinear systems acting on deterministic inputs since the early 1970's. They describe a broad class of nonlinear input-output maps using a type of functional series expansion, but in most applications, a system's inputs have noise components. In such circumstances, new mathematical machinery is needed to properly describe the input-output map via the Chen-Fliess algebraic formalism. In this dissertation, a class of L₂-Itô stochastic processes is introduced specifically for this purpose. Then, an extension of the Fliess operator theory is presented and sufficient conditions are given under which …

Effects Of 4-H Hand-On School Enrichment Lessons On Science Test Scores, Wendy Herdman

OTS Master's Level Projects & Papers

The problem of this study was to determine whether participation in 4-H hands-on in-school SOL enrichment lessons improved science SOL test scores for third and fifth graders.

Effects Of Computer Application Courses On Students At Menchville High School, Wardell Boyle

OTS Master's Level Projects & Papers

The problem of this study was to determine the effects of computer application courses on student academic achievement at Menchville High School in Newport News, Virginia.