Digital Commons Network^™

Contrasting Latitudinal Gradients Of Body Size In Helminth Parasites And Their Hosts, Tad Dallas, Alyssa Lois M. Gehman, A. Alonso Aguirre, Sarah A. Budischak, John M. Drake, Maxwell J. Farrell, Ria Ghai, Shan Huang, Ignacio Morales-Castilla

Faculty Publications

© 2019 John Wiley & Sons Ltd Aim: We examined body size scaling relationships for two developmental life stages of parasitic helminths (egg and adult) separately in relationship to latitude (i.e. Bergmann's rule), temperature and temperature seasonality. Given that helminth eggs experience environmental conditions more directly, whereas adults live inside infected host individuals, we predict stronger environmentally driven gradients of body size for eggs than for adults. Location: Global. Time period: Present day. Major taxa studied: Parasitic helminths. Methods: We compiled egg size and adult body size data (both minimum and maximum) for 265 parasitic helminth species from the literature, …

The Use Of Geospatial Modeling And Novel Diagnostics To Detect And Map Risk Factors Of Soil-Transmitted Helminths In Feira De Santana, Brazil, Ryan Harry Avery

LSU Doctoral Dissertations

Soil-transmitted helminth (STH) infections impact billions of people worldwide. The traditional STH control approach is a morbidity control strategy implementing mass drug administration (MDA) programs targeting school-aged children (SAC). In Brazil, this control strategy has decreased STH prevalence to less than 20% in most of the country and providing an opportunity to transition from the morbidity control program and towards a surveillance and response system geared towards STH elimination. Surveillance and response systems geared towards elimination require the implementation higher accuracy diagnostics to detect infection in low-transmission communities, surveillance of entire households, high-resolution modeling at the household-habitat scale, and targeted …

A Case-Study Approach To Investigate Transmission, Co-Infection, And Clinical Sequelae During Epidemics Of Dengue And Ebola Virus Disease, Jennifer Elizabeth Giovanni

LSU Doctoral Dissertations

From within their ecologic niches, zoonotic viruses emerge from animal reservoirs into the edges and centers of human habitation to exploit opportunities for unabated transmission within immunologically–naïve populations. Our understanding of where, in whom, and how these viruses emerge is under direct challenge, driving the evolution of modern infectious disease epidemiology within a rapidly-connected global community. The studies presented herein are based on analyses of both aggregate and case-level data, which, we argue, provide unique insight into the complexities of transmission, co-infection, and clinical sequelae occurring within, and arising from, epidemics of emerging zoonotic viruses. In Chapter II, we investigate …

Hsv-1 Live-Attenuated Vaccine Strain Vc2 Confers Complete Protection In Mice Against Ocular Immunipathogenesis By The Human Clinical Strain Hsv-1 (Mckrae), Shan Krishnan Naidu

LSU Doctoral Dissertations

Herpes simplex virus type-1 (HSV-1) can cause severe ocular infection and blindness. We have previously shown that the HSV-1 VC2 vaccine strain is protective in mice and guinea pigs against genital herpes infection following vaginal challenge with HSV-1 or HSV-2. In this study, we evaluated the efficacy of VC2 intramuscular vaccination in mice against herpetic keratitis following ocular challenge with the lethal human clinical strain HSV-1(McKrae). VC2 vaccination in mice produced superior protection and morbidity control in comparison to its parental strain HSV-1(F). Specifically, after HSV-1(McKrae) ocular challenge, all VC2- vaccinated mice survived, while 30% of the HSV-1(F)- vaccinated and …

Morphological And Physiological Characteristics Of Endornavirus-Infected And Endornavirus-Free Near-Isogenic Lines Of Bell Pepper (Capsicum Annuum), C. Escalante, R. A. Valverde

Faculty Publications

Plant endornaviruses are persistent viruses that infect plants without causing symptoms. Although endornaviruses have been reported in many economically important plant species, little is known about the effect they have on their hosts. Bell pepper endornavirus (BPEV) has been reported in cultivated peppers (Capsicum spp.). In commercial cultivars of bell pepper (C. annuum) grown in the United States, this virus is found at prevalence rates of 100%. Two bell pepper near-isogenic lines (NILs), one BPEV-infected and the other BPEV-free, were generated and used to investigate the type of symbiotic relationship between BPEV and bell pepper. Selected morphological and physiological characteristics …

Framework For Algorithmically Optimizing Longitudinal Health Outcomes: Examples In Cancer Radiotherapy And Occupational Radiation Protection, Lydia Joyce Wilson

LSU Doctoral Dissertations

Background: Advancements in the treatment of non-infectious disease have enabled survival rates to steadily increase in recent decades (e.g., diabetes, heart disease, and cancer). Epidemiological studies have revealed that the treatments for these diseases can have life-threatening and/or life–altering effects. Thus, realizing the full beneficial potential of advanced treatments necessitates new tools to algorithmically consider all major components of the health outcome, including benefit and detriment. The goal of this dissertation was to develop a framework for improving projected health outcomes following planned radiation exposures in consideration of all beneficial and detrimental, early and late, and fatal and non-fatal …

Amplification Dynamics Of Platy-1 Retrotransposons In The Cebidae Platyrrhine Lineage, Jessica M. Storer, Jackson R. Mierl, Sarah A. Brantley, Breanna Threeton, Yahor Sukharutski, Lydia C. Rewerts, Corey P. St Romain, Madeline M. Foreman, Jasmine N. Baker, Jerilyn A. Walker, Joseph D. Orkin, Amanda D. Melin, Kimberley A. Phillips, Miriam K. Konkel, Mark A. Batzer

Faculty Publications

© 2019 The Author(s). Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. Platy-1 elements are Platyrrhine-specific, short interspersed elements originally discovered in the Callithrix jacchus (common marmoset) genome. To date,only themarmoset genomehas been analyzed for Platy-1 repeat content.Here,we report full-length Platy-1 insertions in other NewWorld monkey (NWM) genomes (Saimiri boliviensis, squirrel monkey; Cebus imitator, capuchin monkey; and Aotus nancymaae, owl monkey) and analyze the amplification dynamics of lineage-specific Platy-1 insertions. A relatively small number of full-length and lineage-specific Platy-1 elements were found in the squirrel, capuchin, and owl monkey genomes compared with the …

Louisiana Agriculture Spring, 2019

Louisiana Agriculture

No abstract provided.

Amplification Dynamics Of Platy-1 Retrotransposons In The Cebidae Platyrrhine Lineage, Mark A. Batzer, Jessica M. Storer, Jackson R. Mierl, Sarah A. Brantley

Faculty Publications

Platy-1 elements are Platyrrhine-specific, short interspersed elements originally discovered in the Callithrix jacchus (common marmoset) genome. To date, only the marmoset genome has been analyzed for Platy-1 repeat content. Here, we report full-length Platy-1 insertions in other New World monkey (NWM) genomes (Saimiri boliviensis, squirrel monkey; Cebus imitator, capuchin monkey; and Aotus nancymaae, owl monkey) and analyze the amplification dynamics of lineage-specific Platy-1 insertions. A relatively small number of full-length and lineage-specific Platy-1 elements were found in the squirrel, capuchin, and owl monkey genomes compared with the marmoset genome. In addition, only a few older Platy-1 subfamilies were recovered in …

Virulence-Driven Trade-Offs In Disease Transmission: A Meta-Analysis*, Miguel A. Acevedo, Forrest P. Dillemuth, Andrew J. Flick, Matthew J. Faldyn, Bret D. Elderd

Faculty Publications

© 2019 The Author(s). Evolution © 2019 The Society for the Study of Evolution. The virulence–transmission trade-off hypothesis proposed more than 30 years ago is the cornerstone in the study of host–parasite co-evolution. This hypothesis rests on the premise that virulence is an unavoidable and increasing cost because the parasite uses host resources to replicate. This cost associated with replication ultimately results in a deceleration in transmission rate because increasing within-host replication increases host mortality. Empirical tests of predictions of the hypothesis have found mixed support, which cast doubt about its overall generalizability. To quantitatively address this issue, we conducted …

Analysis Of Hepatitis C Prevalence In A Justice-Involved Medicaid Population In Louisiana, William R. Boles Iii

Honors Capstones

No abstract provided.

Ale Beer Containing Free And Immobilized Lactobacillus Brevis, A Potential Delivery System For Probiotics, Kriza Faye Albacite Calumba

LSU Master's Theses

Probiotic products can improve gastrointestinal health and probiotics in ale beer may be attractive to health-conscious consumers. However, the alcohol in beer may decrease probiotic viability. A powder produced from durian fruit (Durio zibethinus) rind, a by-product that is currently unutilized, contains large amounts of fiber which can be used to immobilize probiotics. The objective of this study was to produce ale beer with free Lactobacillus brevis (FLB) and immobilized cells (ILB) on durian rind powder (DRP) as a potential delivery system for probiotics. L. brevis was immobilized in DRP then the morphology of FLB and ILB was …

Efficacy Of Aqueous And Gaseous Chlorine Dioxide In Reducing Salmonella, E. Coli O157:H7, And Listeria Monocytogenes On Sweet Potatoes, Strawberries, And Blueberries, Phillip Luu

LSU Master's Theses

Chlorine dioxide, a stronger oxidizing agent, is effective against a broad spectrum of microorganisms. This study evaluated the efficacy of chlorine dioxide on reducing Salmonella, E. coli O157:H7, and Listeria monocytogenes on sweet potato (aqueous ClO₂), strawberries and blueberries (gaseous ClO₂). Sweet potatoes inoculated with multi-strain cocktails of each bacterial pathogen (10⁷ CFU/cm²) were treated with 5 ppm aqueous ClO₂ or water for 10, 20, and 30 minutes. Strawberries and blueberries spot inoculated with multi-strain cocktails of each bacterial pathogen (10⁷ CFU/g) were treated with gaseous ClO₂ sachets (63 mg/l for strawberry and 30 mg/l for blueberry) …

Effects Of Dietary Sugars And Sugar Alcohols On Mortality And Thermal Tolerance In Culex Quinquefasciatus And Aedes Aegypti, Madeleine Chura

LSU Master's Theses

Aedes aegypti (L. 1762), the yellow fever mosquito, and Culex quinquefasciatus Say 1823, the southern house mosquito, are prevalent in tropical and subtropical areas worldwide and are responsible for the spread of a number of devastating diseases to humans and livestock. The development of new control methods, as well as continued study of mosquito biology, is vital for improving human health. This study aimed to examine the efficacy of sugar alcohols as a novel means for mosquito control, as well as how sugar alcohols and other factors are involved in thermal tolerance in mosquitoes.

No-choice tests with the sugar alcohols …

Effect Of Environmental Factors And Residual Sanitizers On Survival And Attachment Of Indicator Organism And Human Pathogens On Fresh Produce, Vijay Singh Chhetri

LSU Doctoral Dissertations

A comprehensive understanding of the behavior of microbial contaminants on produce surfaces in agricultural farms and during post-harvest activities is essential for the development of produce safety risk management strategies. Our studies investigated the survival and the attachment of E. coli on watermelon surfaces in agricultural settings with different levels of vegetation, and the effect of residual sanitizers on the survival and the attachment of E. coli O157: H7 and L. monocytogenes on spinach leaves. The attachment strength (S_R) of the E. coli cells on watermelon surfaces significantly increased (P<0.05) from 0.04 to 0.99 in the first 24 h, which was primarily due to the decrease in loosely attached population, given that the population of strongly attached cells was constant. The daily die-off rate of E. coli ranged from -0.12 …

Improving Coupled Enzyme Assays With Capillary Electrophoresis, Thu Hoai Nguyen

LSU Doctoral Dissertations

The goal of this project is to address limitations of coupled enzyme assays using capillary electrophoresis (CE). In some enzyme assays, it is ineffective to directly detect products and substrates spectroscopically (absorption or fluorescence). Coupling the enzyme-catalyzed reaction of interest with another enzyme-catalyzed reaction allows for indirect detection of product formation or substrate depletion for the target enzyme. While conventional coupled enzyme assays are facile for kinetic measurements, they can be problematic for inhibition screening due to spectral and inhibitor interferences. To address these limitations of coupled assays, CE has been used to develop enzyme assays for acetyl-coenzyme A carboxylase …

Mechanisms To Regulate Genes Encoding Clinically Relevant Multidrug Transporters At The Crossroads Of Antibiotic Resistance And Oxidative Stress Detection, Afsana Sabrin

LSU Doctoral Dissertations

Multiple Antibiotic Resistance Regulators (MarRs) are DNA binding proteins involved in bacterial survival and pathogenesis. My PhD dissertation focuses on a MarR homolog, OstR, which regulates genes encoding major multidrug transporters, a resistance-nodulation-division (RND) and an E. coli multidrug resistance B (EmrB) efflux pump homolog in Burkholderia thailandensis. The ostR gene is divergently oriented from genes encoding a hypothetical protein (Hyp) and an RND transporter and adjacent to a gene encoding an EmrB transporter. OstR binds to the promoters of each gene (K_d = 64.9 ± 8.0 nM, K_d = 126.1 ± 10.9 nM and K …

Can Assisted Reproductive Technologies Help Conserve 300 Million Years Of Evolution? A First Attempt At Developing These Technologies For Male Reptiles, Sean M. Perry

LSU Doctoral Dissertations

Biodiversity loss is the most critical environmental problem threatening ecosystem, animal, and human health today. Increases in extinction rates have been observed over the past 50 years, with reptile losses occurring twelve times faster than traditional extinction rates. This demonstrated biodiversity loss is secondary to climate change, habitat destruction, infectious disease, invasive species, poaching, and unsustainable trade. Approximately 20% of all reptiles are threatened with extinction and population declines are approaching rates similar to the current amphibian extinction crisis. Preventing the extinction of reptiles will require humans to acknowledge these losses and develop plans to preserve these evolutionary sentinel species. …

Duration Of Protection From Live Attenuated Vs. Sub Unit Hsv-2 Vaccines In The Guinea Pig Model Of Genital Herpes: Reassessing Efficacy Using Endpoints From Clinical Trials, David I. Bernstein, Rhonda D. Cardin, Derek A. Pullum, Fernando J. Bravo, Konstantin G. Kousoulas, David A. Dixon

Faculty Publications

© 2019 Bernstein et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Background Although herpes simplex viruses (HSV) are a major target for vaccine development no vaccine is currently licensed. Methods A live attenuated HSV virus vaccine, VC2 was compared to a subunit HSV vaccine, glycoprotein D (gD2) administered with the adjuvant, MPL/Alum using the Guinea pig model of genital herpes. Three doses of intramuscular (IM) vaccine were provided followed by intravaginal challenge …

On A Stochastic 2d Cahn-Hilliard-Navier-Stokes System Driven By Jump Noise, G. Deugoué, T. Tachim Medjo

Communications on Stochastic Analysis

No abstract provided.

Dominin And Segon Form Multiprotein Particles In The Plasma Of Eastern Oysters (Crassostrea Virginica) And Are Likely Involved In Shell Formation, Qinggang Xue, Jean Philipe Beguel, Jerome La Peyre

Faculty Publications

Copyright © 2019 Xue, Beguel and La Peyre. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. Dominin and segon are two proteins purified and characterized from the plasma of eastern oysters Crassostrea virginica, making up about 70% of the total plasma …

Impacts Of Experimental Flooding On Microbial Communities And Methane Fluxes In An Urban Meadow, Baton Rouge, Louisiana, Gary M. King, Katherine Henry

Faculty Publications

© 2019 King and Henry. The impacts of extended flooding on microbial communities and their activities in natural and agricultural wetlands have been well-documented, but there is little basis for predicting the responses of urban soil microbial communities to infrequent, short-term flooding. To assess these responses, surface soil samples (0–1 cm) and intact soil cores (10 cm depth) were collected from an urban meadow in Baton Rouge, LA subsequent to an unprecedented flood during August 2016. During the flood, a topographically low region of the meadow (LM) was inundated for at least several days, while an elevated area (upper meadow …

Children’S Environmental Health In South And Southeast Asia: Networking For Better Child Health Outcomes, Peter D. Sly, Brittany Trottier, David Carpenter, Ubon Cha’On, Stephania Cormier, Betsy Galluzzo, Samayita Ghosh, Fiona Goldizen, Michelle Heacock, Paul Jagals, Hari Datt Joshi, Prachi Kathuria, Le Thai Ha, Melina S. Magsumbol, Panida Navasumrit, Poornima Prabhakaran, Banalata Sen, Chris Skelly, Inoka Suraweera, Sathiarany Vong, Chador Wangdi, William A. Suk

Faculty Publications

© 2019 The Author(s). Children are particularly vulnerable to environmental hazards because they receive higher doses of pollutants in any given environment and often do not have equitable access to social protection mechanisms such as environmental and health care services. The World Health Organization established a global network of collaborating centres that address children’s environmental health (CEH). The network developed a focus on low- and middle-income countries (LMICs) and is broadening its reach by conducting regional workshops for CEH. Objective: This paper reports on the outcomes of a workshop held in conjunction with the 17th International Conference (November 2017) of …

Role Of Type I Interferon (Ifn) In The Respiratory Syncytial Virus (Rsv) Immune Response And Disease Severity, Diego R. Hijano, Luan D. Vu, Lawrence M. Kauvar, Ralph A. Tripp, Fernando P. Polack, Stephania A. Cormier

Faculty Publications

© 2019 Hijano, Vu, Kauvar, Tripp, Polack and Cormier. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. Respiratory syncytial virus (RSV) is the most common cause of lower respiratory tract disease in children patients, such as premature infants, patients with cardiac …

Bottom-Up Trait-Mediated Indirect Effects Decrease Pathogen Transmission In A Tritrophic System, Bret D. Elderd

Faculty Publications

© 2018 by the Ecological Society of America A plant's induction of secondary defenses helps to decrease herbivore damage by changing resource quality. While these chemical or physical defenses may directly decrease herbivory, they can also have indirect consequences. In a tritrophic system consisting of a plant, an insect herbivore, and an insect pathogen, plant based trait-mediated indirect effects (TMIEs) can alter host–pathogen interactions and, thereby, indirectly affect disease transmission. In a series of field experiments, individual soybean plants (Glycine max) were sprayed with either a jasmonic acid (JA) solution to trigger induction of plant defenses or a similar control …

Geometric Hawkes Processes With Graph Convolutional Recurrent Neural Networks, Jin Shang, Mingxuan Sun

Faculty Publications

Hawkes processes are popular for modeling correlated temporal sequences that exhibit mutual-excitation properties. Existing approaches such as feature-enriched processes or variations of Multivariate Hawkes processes either fail to describe the exact mutual influence between sequences or become computational inhibitive in most real-world applications involving large dimensions. Incorporating additional geometric structure in the form of graphs into Hawkes processes is an effective and efficient way for improving model prediction accuracy. In this paper, we propose the Geometric Hawkes Process (GHP) model to better correlate individual processes, by integrating Hawkes processes and a graph convolutional recurrent neural network. The deep network structure …

Gauging Support For Macroecological Patterns In Helminth Parasites, Tad A. Dallas, A. Alonso Aguirre, Sarah Budischak, Colin Carlson, Vanessa Ezenwa, Barbara Han, Shan Huang, Patrick R. Stephens

Faculty Publications

© 2018 John Wiley & Sons Ltd Aim: To explore spatial patterns of helminth parasite diversity, and to investigate three main macroecological patterns – (a) latitude–diversity relationships, (b) positive scaling between parasite and host diversity, and (c) species–area relationships – using a largely underutilized global database of helminth parasite occurrence records. Location: Global. Methods: We examined the London Natural History Museum’s collection of helminth parasite occurrence records, consisting of over 18,000 unique host species and 27,000 unique helminth parasite species distributed across over 350 distinct terrestrial and aquatic localities. Results: We find support for latitudinal gradients in parasite diversity and …

On A Stochastic 2d Simplified Liquid Crystal Model Driven By Jump Noise, T. Tachim Medjo

Communications on Stochastic Analysis

No abstract provided.

Understanding Fear Of Zika: Personal, Interpersonal, And Media Influences, Chun Yang, James Price Dillard, Ruobing Li

Faculty Publications

Fear of infectious disease often motivates people to protect themselves. But, it can also produce negative bio-social-psychological effects whose severity is on par with those of the disease. The WHO declaration of Zika as a world health crisis presented an opportunity to study factors that bring about fear. Beginning nine days after the WHO announcement, data were gathered from women aged 18–35 living in the southern United States (N = 719). Respondents reported experiencing fear of Zika at levels akin to those reported following other significant crises/disasters (e.g., the terrorist attacks of 9/11). Fear increased as a function of (1) …

Quality Of United States And Bangladesh Shrimp Due To Growth And Post-Harvest Practices, Murshida Khan

LSU Doctoral Dissertations

Shrimp is one of the most consumed and traded seafood, and due to its high demand, consumers depend on both wild caught and farmed products. Post-harvest practices can greatly affect health, safety, and quality, and the goal of this project was to study the effects of chemicals, bacteria, and antibiotics on shrimp from Louisiana and Bangladesh. Quality changes (proximate composition, color, texture and total plate count of bacteria) in shrimp from Louisiana (Farfantepenaeus aztecus and Litopenaeus setiferus) and Bangladesh (Penaeus monodon and Macrobrachium rosenbergii) were determined due to the application of melanosis preventing compounds (sulfite powder, …