Digital Commons Network^™

Transitional Justice And Counter-Productivity: A Case Study Of Serbia And Croatia, Michael F. Curry

Dissertations, Theses, and Capstone Projects

In the post-Cold War era, transitional justice emerged as a method to reconcile societies that had suffered large-scale human rights abuses through autocratic oppression and/or intra-state conflicts. During this time, the concept of what transitional justice meant and what problems it could resolve expanded exponentially. However, the empirical results of such initiatives have been mixed. Many states subject to transitional justice initiatives have failed to liberalize or develop domestic governance capacities. Why do transitional justice initiatives fail even under the most favorable conditions?

The most common answer to this question is that these initiatives are often ineffective, hindered by a …

Ai-Powered Multi-Omics Integration For Predictive Modeling Of Genotype-Environment-Phenotype Relationships, You Wu

Dissertations, Theses, and Capstone Projects

This dissertation presents a series of machine learning frameworks for modeling genotype–environment–phenotype relationships through integrative predictive modeling of multi-omics data. The work addresses three major axes of biological complexity: modeling biological information transmission cross-levels from genes to proteins to phenotypes, predicting molecular features cross-scale from cells to tissues to organisms, and translating phenotypes cross-species from model systems to humans. Each proposed method also tackles key machine learning (ML) challenges in the biomedical domain, including data scarcity, domain shift, out-of-distribution (OOD) generalization, and hierarchical modeling. Specifically, this dissertation introduces five novel deep learning algorithms: MultiDCP predicts drug-induced transcriptomic and viability responses …

In A Dark Wood Amid The Storm: Literary Representations Of Midlife In The Social And Political Turbulence Of A Kindred Era, Robert Mccreanor

Dissertations, Theses, and Capstone Projects

The apparent parallels between the social and political crises of the 19-teens’s to 1930’s and those of today is a source of popular fascination and commentary. Some have argued that much of our current anxieties about impending global doom harken back to the widespread doomsaying of exactly a century ago in relation to World War I, the 1918 Spanish Influenza and the rising authoritarianism of the 1930’s. Exploration of the midlife experience amid 21^st century political and social crises has been prolific and can also be seen to echo literary representations of this particular life stage from the seemingly …

Exploring The Role Of Ecological Traits In Shaping Spatial Patterns Of Genetic Diversity, Rilquer Mascarenhas Da Silva

Dissertations, Theses, and Capstone Projects

The field of comparative phylogeography aims at uncovering common underlying causes for shared patterns of diversity and diversification at the population level. However, it is now widely accepted that intraspecific genetic diversity patterns can differ considerably across co-occurring taxa due to ecological processes acting at the population level (and influencing individual movement and abundance). To model the processes underlying lineage diversification and demographic shifts in response to environmental changes, phylogeographers and population geneticists are now faced with the challenge of incorporating measurements of species ecological traits into their molecular studies. This dissertation aimed at investigating how different types of ecological …

Speaking From The Underground: Notes On Lois Elaine Griffith & The Nuyorican Poets Cafe Aesthetic, Joseph Anthony Cáceres

Dissertations, Theses, and Capstone Projects

Speaking from the Underground explores the work of Lois Elaine Griffith, an Afro-Caribbean diasporic visual and literary artist of Barbadian descent and one of the last surviving founders of the Nuyorican Poets Cafe, a Puerto Rican cultural institution grounded in Afro-Caribbean traditions located in Manhattan’s Lower East Side. In the common, cultural parlance, the Cafe has become synonymous with spoken word and slam poetry. Since 1973 it has been the place where artists of mostly African, Caribbean, Latinx descent gather to craft works centered around lived experiences to shape a language to counter a conventional understanding of history and a …

“Justice, Justice Pursue”: Coworker Reactions To Religious Workplace Accommodations, Joshua A. Nagel

Dissertations, Theses, and Capstone Projects

This study examines coworker reactions to religious accommodations in the workplace, a growing necessity as religious diversity increases, and recent legislation strengthens protections for religious observances. Religious accommodations can provoke perceptions of differential treatment, impacting coworker morale, cooperation, and organizational cohesion. While extensive research exists on disability accommodations, religious accommodations differ fundamentally as they often relate to moral beliefs and are viewed variably in terms of necessity and controllability. Drawing on organizational justice theories, this dissertation applies and modifies Colella’s (2001) and Colella et al.’s (2004) models for coworker perceptions of distributive and procedural fairness of disability accommodations to the …

Characterization Of The Attentional Profile In Women And Girls With A Fragile X Premutation Allele, Shira Russell-Giller

Dissertations, Theses, and Capstone Projects

The fragile X premutation (PM), characterized by 55 to 200 CGG repeats in the FMR1 gene, is associated with diverse clinical outcomes, including cognitive and neuropsychiatric changes. Despite most individuals with a PM presenting without overt clinical symptoms, adults face increased risks for conditions associated with a PM, including higher rates of attention and executive difficulties. This dissertation investigates the developmental trajectory of attention and executive functioning changes in females with a PM using a series of prospective studies employing the Attention Network Test (ANT). Study 1 re-analyzed prior data on sustained attention in women with a PM, revealing significant …

The Spaces Between: A Phenomenological Exploration Of Classical Music Performance Practice, Fifi Zhang

Dissertations, Theses, and Capstone Projects

In his theory of duration, the philosopher Henri Bergson (1859-1941) asserts that the present moment is “both a perception of the immediate past and a determination of the immediate future…a joint system of sensations and movements.” In an ideal musical performance, this sensori-motor apparatus guides every one of the performer’s decisions on stage, resulting in an aural experience that is spontaneous, visceral, and deeply personal. In practice, much of today’s classical music performance culture, which relies heavily on visual notation and prioritizes fidelity to the composer’s intent, is antithetical to fundamental artistic values such as creativity, individual self-expression, and direct …

Retinal Precursor Cell Enriched Multiomic And Pseudo-Time Analysis Of Developing And Reprogrammed Photoreceptors, Brendon M. Patierno

Dissertations, Theses, and Capstone Projects

The vertebrate retina is a complex tissue made up of seven major cell subtypes which during development must differentiate and localize into a highly organized structure. These neuronal cells do not regenerate if damaged or diseased, and the progressive deterioration of cone photoreceptor cells is the leading cause of age related blindness. Currently there are no cures for this disease, but one promising therapeutic avenue is cell transplantation research. If we can further elucidate the gene regulatory networks that define cone cell development, this knowledge could be applied to the generation of healthy cone cells in clinically relevant models.

The …

Nonlinear Diffusion, Hydrodynamic Cascades And Jamming In Kinetically Constrained Systems: Insights From Lattice Gas Models, Abhishek Raj

Dissertations, Theses, and Capstone Projects

This dissertation investigates non-linear diffusion processes and emergent dynamical phenomena in kinetically constrained lattice gases. Two central models are considered: a one-dimensional lattice gas exhibiting a diffusion cascade triggered by hydrodynamic nonlinearities and a triangular ladder exclusion model that undergoes a jamming transition. The former demonstrates stretched exponential decay consistent with non-perturbative long-time tails, while the latter illustrates how classical-quantum mappings yield insight into glassy dynamics and mobility constraints. Through a combination of numerical simulations, analytical perturbation theory, and mean-field approximations, the work uncovers mechanisms underlying anomalous transport, jamming transitions, and the breakdown of perturbative hydrodynamics.

The Question Of Money: State, Protest, And Informal Currencies In The Wake Of Greece’S Economic Crisis, Helen Panagiotopoulos

Dissertations, Theses, and Capstone Projects

Monetary unions are designed to foster political, social, and economic integration among member states by enabling the free movement of people, goods, services, and capital. Yet when a member nation faces economic crisis, citizens may respond by creating monetary systems of their own. This research asks whether such practices are simply demonstrations of human resiliency and adaptability, or whether they also challenge the very idea of a shared market and currency that do not align with national identity. Greece offers a crucial case for this inquiry. Following the 2008 debt crisis, austerity measures led to economic depression, mass unemployment, and …

Disability Theatre Communities: Engaging Artists And Audiences In Contemporary International Performance, Joseph Paul Hill

Dissertations, Theses, and Capstone Projects

“Disability Theatre Communities” examines how communities are constructed in, through, and around contemporary international disability theatre performances. It explores ideas of community formation and intersection across three case studies to elucidate the various ways in which disability theatre artists, productions, companies, and organizations attract, engage, and educate variable artist and audience communities. The project analyzes Rome, Italy’s Teatro Patologico and its Integrated Theatre of Emotion, a theatrical training program for neurodivergent performers; Wales-based writer, theatre-maker, and dramaturg Kaite O’Reilly, whose international collaborations center d/Deaf and disabled performers and foreground audience accessibility; and the biennial BIT (Blind in Theatre) International Festival …

Nonlinear Optics Through Femtosecond Light-Matter Interactions, Shah Faisal B. Mazhar

Dissertations, Theses, and Capstone Projects

This dissertation offers experimental and theoretical insights into nonlinear light-matter interactions induced by intense femtosecond (fs) laser pulses. It investigates key phenomena, including stimulated Raman scattering (SRS) from phonon and magnon quasiparticles, supercontinuum (SC) generation via self-phase modulation (SPM), conical emission (CE) arising from four-wave mixing (4WM), and modulation instability (MI) driven by cross-phase modulation (XPM) between SRS and SC processes. These effects are studied in diverse media using state-of-the-art femtosecond lasers.

The interplay among SRS, SC, 4WM, and MI is examined to probe vibrational modes and temperature-dependent magnetic excitations in condensed-matter systems. Experiments are conducted on anisotropic uniaxial calcite …

Choreographies Of Care: Disability And Relationality In Performance, Kiera Bono

Dissertations, Theses, and Capstone Projects

My dissertation explores enactments of what I am calling “choreographies of care” in interdisciplinary performance practices in the 21^st century. Working across disability studies, race and ethnicity studies, queer theory, and performance studies, I investigate the ways in which chronically ill and disabled artists have generated multisensorial movement, sound, and performance works that resist normative understandings of time, space, bodies, and interactions between bodies. Focusing mostly on performances and events that I have attended in New York City or virtually over the past decade, my project engages directly with disability arts communities in which I have been deeply embedded …

Teaching And Technology: "You Can't Just Do The Same Thing Online", Sakina Laksimi

Dissertations, Theses, and Capstone Projects

This dissertation examines how faculty at the City University of New York navigated the abrupt transition to online teaching during the COVID-19 pandemic, revealing how pedagogy is shaped by technological, institutional, and social conditions. Drawing on twenty-two interviews with twelve faculty across eight disciplines, I use a grounded theory approach to analyze how instructors adapted courses, reimagined assessment, and sustained connection with students amid crisis. Three overlapping pedagogical orientations emerged: improvisational, relational, and design-based teaching. These approaches highlight how faculty balanced responsiveness, care, and intentional course design in environments mediated by digital platforms and marked by inequity. The study situates …

Non-Linear Heart Rate Variability: Investigating Cardiac Complexity Of Psychopathic Traits, Khaya A. Roach

Dissertations, Theses, and Capstone Projects

Psychopathy is a complex personality disorder characterized by distinct emotional and interpersonal deficits, and affects approximately 25% of the prison population and 4.5% of nonincarcerated populations. The manifestation of psychopathy can be understood through two distinct variants, each demonstrating unique etiological pathways and clinical presentations. Primary psychopathy is characterized by core interpersonal and affective deficits, including shallow emotions and manipulativeness, while demonstrating reduced autonomic responsivity and lower anxiety levels. Secondary psychopathy presents with higher levels of impulsivity, anxiety, and emotional dysregulation, showing stronger associations with various psychopathologies. Treatment outcomes also vary between the variants, with primary psychopaths typically showing poor …

Towards Automated Evolution Of Imperative Deep Learning Programs, Tatiana Castro-Vélez

Dissertations, Theses, and Capstone Projects

Software engineering (SE) is increasingly intersecting with data-centric domains such as machine learning (ML) and deep learning (DL). Similar to bugs in traditional software systems, defects can emerge in ML and DL systems. ML, including DL, systems are now widespread and rely on dynamic models defined by input data. Developers face the challenge of building dependable systems while addressing the demand for scalable software.

Efficiency is essential to support responsiveness with respect to ever-growing datasets. Traditional DL frameworks achieve scalability through deferred execution, enabling symbolic, graph-based deep neural network (DNN) computation. While efficient, this approach is error-prone, cumbersome, and difficult …

Toward A Generalizable Perceptual Hashing Framework For Image Manipulation Detection, Priyanka Samanta

Dissertations, Theses, and Capstone Projects

This thesis contributes to research in adversarial image manipulation detection. The primary motivation is the increasing need to verify digital images, especially for legal evidence, journalistic proof, or social media content—where manipulated or fabricated images can mislead, defame, or distort reality. A key application and contribution of this work is the development of eWitness, a blockchain application that generates and registers image provenance at capture time to enable independent verification of authenticity. The secret sauce behind the system is SmartHash, a novel and efficient perceptual hashing algorithm designed for real-world deployment in systems like eWitness. Unlike existing algorithms, SmartHash targets …

Asian American Artists, Improvisation, And Collaboration, Johnna Wu

Dissertations, Theses, and Capstone Projects

The purpose of my dissertation is to explore how contemporary Asian Americans artist-performers have formulated their identities through collaborations with the Association for the Advancement of Creative Musicians (AACM). The project addresses issues in the existing literature on this topic and provides an alternative framework of cosmopolitanism to understanding the multidimensional aspects of artistic collaborations. The dissertation examines the history of the AACM and the Asian American improvisers and reveals ideological differences among its members on how music should reflect their identities. These histories paved the way for the artist subjects of my three case studies: Miya Masaoka, Vijay Iyer, …

The Effect Of Tbi On Working Memory And Anxiety In Rats, Mariola Sobolewska

Dissertations, Theses, and Capstone Projects

Traumatic Brain Injury (TBI) is a significant public health concern, often leading to cognitive and emotional impairments. This study examined the effects of TBI on working memory and anxiety-like behavior in young male Sprague-Dawley rats using the Radial Arm Maze (RAM) and Elevated Plus Maze (EPM), which are behavioral assessments. The RAM tests spatial working memory by evaluating the animal’s ability to remember and efficiently navigate multiple arms to retrieve rewards. The EPM assesses anxiety-like behavior based on the animal’s preference for open versus closed arms. The study utilized young male Sprague-Dawley rats, a well-established rodent model known for its …

Repurposing Atractylenolide Iii, A Natural Anti-Inflammatory Compound, For Alzheimer’S Disease, Angela M. Steele

Dissertations, Theses, and Capstone Projects

Alzheimer’s disease (AD) is a debilitating neurological condition ranked as the fifth leading cause of death in adults over the age of 65. Despite the severity, 98% of drugs have failed as treatments for AD. Current novel drug development approaches have been unable to produce a disease-modifying treatment as they often have a one-target approach, not accounting for the complex nature of the disease. One of the hallmarks of the disease, inflammation, may provide a better target for treatment because it interacts with multiple facets of the disease. Drug repurposing to identify compounds that mitigate inflammation in AD could provide …

Text-Based Propaganda Detection, Vivek Sharma

Dissertations, Theses, and Capstone Projects

In the digital age, the swift consumption of news and the widespread dissemination of propaganda significantly threaten democratic principles and informed decision-making. News organizations, often aligned politically, tailor their content to appeal to specific audiences, thereby perpetuating biases. Despite advancements in detecting propaganda through various computational techniques, including Large Language Models(LLM) and BERT-based approaches, significant challenges persist concerning data availability and the effectiveness of detection tools. This thesis explores the landscape of text-based propaganda and reviews related research in textual analysis. It introduces a novel method for collecting a social-media based dataset, which includes analysis of journalists' tweets to discern …

The Architecture Of Exclusion: Disability, Race, And The History Of New York City’S 600 Schools, Francine Almash

Dissertations, Theses, and Capstone Projects

This dissertation investigates the largely erased history of New York City’s 600 schools—segregated public schools created to house students labeled as emotionally disturbed or socially maladjusted. These institutions, operating throughout the mid-20th century, disproportionately served Black and Puerto Rican youth, many of whom were placed in these schools under vague behavioral criteria and with little to no pathway for return to general education settings.

Combining archival research, longitudinal policy analysis, historical media review, and critical race and disability studies frameworks—including DisCrit (Disability Critical Race Theory)—this project situates the 600 schools at the intersection of institutional racism and ableism. It argues …

Online Resources For Oral Communication Courses, Sean P. Palmer

Dissertations, Theses, and Capstone Projects

Online resources focusing on oral communication skills are lacking, even as online education itself expands. While I was aware of this lack, I didn’t realize its severity until LaGuardia Community College went fully remote during the 2020 global pandemic, and I was looking for online tutoring aids for oral communication. Furthermore, the information presented online is frequently unsuitable for the purposes of online pedagogy due to its specialized and jargony mode of presentation. Also, many existing assignments involving oral communication assume public speaking as the default model, despite the growing importance of emergent digital modes of oral performance, like podcasting …

Between The Buffer And The Black Box: Ed(1), Invisible Text, And Delegation In Word Processing, Kai Prenger

Dissertations, Theses, and Capstone Projects

This thesis provides a media archaeological and theoretical examination of ed(1), the Unix line editor developed by Ken Thompson at Bell Labs in 1969, arguing that its approach to "invisible text" processing established lasting patterns of human-computer collaboration that persist in contemporary digital systems. Through historical research, technical analysis, and critical interpretation, this study demonstrates how ed(1) embodied a particular epistemology of text processing that appears alien in a contemporary context, but proves insightful in the age of generative text creation.

ed(1) emerged from the unique convergence of Bell Labs' collaborative research culture, severe hardware constraints of early Unix systems, …

From Stories To Strategy: Oral Histories As Qualitative Evidence For Neighborhood Planning, Randip K. Parhar

Dissertations, Theses, and Capstone Projects

Developments in neighborhood planning have sought more grounded and community- engaged approaches to space and service design. This capstone project examines how oral history recordings can serve as a data source for neighborhood planning. It asks “How can computational methods of analysis be applied to oral history recordings to provide a source of information for neighborhood planning?” using Jamaica, Queens, as a testbed. Using R as a computational tool, the project applies foundational text mining techniques, such as term frequency analysis, n-gram analysis, and topic modeling, to explore patterns and themes within the recorded narratives. These methods can provide a …

Socioeconomic Stasis And Racial Immobility In The United States: How Does American Political Polarization Contribute To African American Poverty?, Carmel Agnant

Dissertations, Theses, and Capstone Projects

African Americans in the United States presently exist in a poverty-stasis, a perpetual social and economic underclass positioning despite a constantly evolving American economy, society, and bodies of legislations due to political polarization. This follows a lengthy history of racial immobility (preventing a racial group from economic mobility) and stagnation since America’s era of sectional polarization over slavery. African Americans lack access to build wealth and have always struggled with societal exclusion. Legislation created and enacted that would support them politically, legally, socially, and/or economically are consistently met with legislative gridlock or countervailing measures to reverse and nullify advancements in …

Re-Envisioning Digital Agency: From Representationalism To Interpretant-Driven Epistemology, Michael C. Lee

Dissertations, Theses, and Capstone Projects

This thesis examines the epistemological and ethical foundations of digital technologies, particularly code and algorithmic systems, by considering their entanglement with representationalism. Arguing that code now functions as a dominant social agent and epistemic subject, through the concept of the Code’s-eye view, I explore how automated datafication reduces human experience to quantifiable inputs, reinforcing epistemic closure and social fragmentation. Drawing on pragmatist philosophy, including Peirce’s semiotics, Dewey’s democratic ethics, and Rorty’s conversational inquiry, I propose an interpretant-driven epistemology grounded in communal inquiry and interpretive openness. This alternative framework resists the binary logic of algorithmic rationality by emphasizing conflict and the …

Starspot Inference Using Light Curve Inversion Techniques, Mohammad Refat

Dissertations, Theses, and Capstone Projects

Star spots are patches that are dark or bright on the surface of a star. They are tightly correlated to the magnetic activity of stars. One of the reasons we want to study star spots is to better understand where the active latitude of stars are located, which helps us understand planet habitability around low mass stars. The Starry package is a set of tools that can map the surface of stars and exoplanets using time series data, with spherical harmonics. Butterpy is a package that allows for the simulation of starspot evolution and their lightcurves. Fleck is a package …

Flotsam And Jetsam: The Role Of Mlb Integration In The Wreckage Of The Negro Leagues, Nastasia Pollas

Dissertations, Theses, and Capstone Projects

“We are the ship, all else the sea.” Adapted from a Frederick Douglass speech, this quote by Rube Foster became the slogan of the Negro Leagues, illustrating the resolve and determination to prosper alone during a time of segregation. Setting aside long-standing rivalry and strife, Black baseball teams united under a shared vision of forming the first professional Black baseball league.

This paper examines how Giddens' structuration theory, connecting social structures with individual actions, can explain both the development and success of the league under segregation and its eventual demise during integration.