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Swanton Pacific Ranch: Student Research Bibliography, Jeanine Marie Scaramozzino, Cameron Anvari, Bailey Kirby, Duncan Davis-Hall, Kate Tenley

Library Scholarship

Swanton Pacific Ranch (SPR) is a 3,200-acre ranch in Santa Cruz County, California, outside the town of Davenport. The ranch is an educational and research facility owned by the Cal Poly Corporation and managed by the California Polytechnic State University (Cal Poly) College of Agriculture, Food and Environmental Sciences. SPR is a learning laboratory that employs Cal Poly’s Learn By Doing philosophy. Many students have completed research projects at SPR but no complete list of student projects exists.

This bibliography includes Cal Poly authored student research and those co-authored with Cal Poly faculty and staff. Documents include senior projects, master’s …

Proteomic Analysis Of The Crustacean Molting Gland (Y-Organ) Over The Course Of The Molt Cycle, Talia B. Head

Master's Theses

Molting in crustaceans is a highly complex physiological process involving negative regulation by two paired endocrine glands, the X-organ/sinus gland complex (XO/SG) and the Y-organ (YO). The XO/SG complex is responsible for making molt-inhibiting hormone (MIH) which negatively regulates synthesis of the molting hormones, ecdysteroids, by the YO. Analysis of gene expression in the XOs and YOs has led to the development of a proposed molecular signaling pathway which regulates ecdysteroidogenesis and subsequent molting in crustaceans. In this study, changes in protein abundance in the YO were characterized over the course of a molt cycle (intermolt, early premolt, mid premolt, …

Sex Differences And The Effects Of Exercise Training On Functional Vasodilation Following Arterial Occlusion In The Balb/C Mouse Spinotrapezius, Britta Nelson

Master's Theses

Peripheral arterial occlusive disease (PAOD) often presents as intermittent claudication, which may be caused by impaired vasodilation. Impairment of resistance vessels may contribute to the pathogenesis of PAOD, and explain the poor correlation between resting blood flow and limb function. Collateral function following arterial occlusion is not well defined, however collaterals and arterialized collateral capillaries (ACCs) in male and female animal models exhibit impaired vasodilation following arterial occlusion, which can potentially be improved with exercise training. Furthermore, resistance vessels in the ischemic tree and stem are likely involved in the pathogenesis of PAOD, however the relative importance of each is …

Exploring The Relationship Of Urban Form And Mental Health In The 500 Largest Cities Of The United States, Daniel Sam Harrison

Master's Theses

Sustainable development efforts frequently focus on understanding and promoting the factors that influence health and wellbeing. Urban environments have received attention in recent years as spaces which can increase psychological distress. Despite hypothesized reports of urban environments being less conducive to good mental health then natural environments, few studies have investigated the effects of urban form characteristics (size, density, nuisances, transportation, and housing characteristics) and mental health measures at the city level. Using 2014 data from the 500 largest cities in the United States, this thesis evaluates the relationship between urban form and aggregate self-report scores of poor mental health. …

Characterization Of Reagent Pencils For Deposition Of Reagents Onto Paper-Based Microfluidic Devices, Cheyenne H. Liu, Isabelle C. Noxon, Leah E. Cuellar, Amanda L. Thraen, Chad Immoos, Andres W. Martinez, Philip J. Costanzo

Chemistry and Biochemistry

Reagent pencils allow for solvent-free deposition of reagents onto paper-based microfluidic devices. The pencils are portable, easy to use, extend the shelf-life of reagents, and offer a platform for customizing diagnostic devices at the point of care. In this work, reagent pencils were characterized by measuring the wear resistance of pencil cores made from polyethylene glycols (PEGs) with different molecular weights and incorporating various concentrations of three different reagents using a standard pin abrasion test, as well as by measuring the efficiency of reagent delivery from the pencils to the test zones of paper-based microfluidic devices using absorption spectroscopy and …

Designing An Authentic Behavioral Research Experience In The Classroom Using Siamese Fighting Fish, Betta Splendens, Gianne Souza, Ronald M. Coleman

STAR Program Research Presentations

Recently there have been major shifts in biology education towards emphasizing the teaching of the scientific process to more closely reflect actual scientific practices. Authentic research experiences require the development of many higher order cognitive skills. Creating an authentic research experience that appropriately scaffolds the development of these complex skills while engaging individual student motivation remains challenging in classroom settings. Some common challenges include limited time available for working with large numbers of students, cramped working areas, and limited funding and materials resources. Using the Siamese Fighting Fish, Betta splendens, we have created an economically viable authentic animal behavioral …

Ecological And Organic Life Safety Concerns Of Hfo-1234yf, Alberni V. Ruiz

STAR Program Research Presentations

While at NOAA my research was directed by the inquiry of whether or not HFO-1234yf, a new compound being introduced into coolant system and replacing greenhouse gases HFC, is harmful to organic life. Using the computer program Matlab I was able to develop figures that represented the concentration of HFO-1234yf (HFO) in 12 different tower locations throughout the country. Comparing and contrasting concentrations of this HFO compound at each site led me to the question the possible harmful side effects this compound could bring to organic life due to the fact that concentration levels are increasing, with one factor being …

Development And Implementation Of An Optimization Model To Improve Airport Security., Kassandra Guajardo, Angela Waterworth, Robert Brigantic Ph.D.

STAR Program Research Presentations

What if airport security teams across the world could quantify and then minimize the amount of risk throughout areas of an airport? The Operations Research Team at the Pacific Northwest National Laboratory is developing and implementing an optimization model called ARAM (Airport Risk Analysis Model) for the Seattle-Tacoma International Airport. ARAM will provide a recommended optimal deployment of security assets to reduce risk in areas of an airport. The model is based on a risk equation that considers consequences, vulnerabilities, and threat magnitudes at airports. ARAM will also provide the estimated risk buy down percentage, which is how much risk …

Investigation Of Ammonia And Nitrate Removal From Municipal Wastewater Using Biowish, Emily Holland

Master's Theses

This research entails investigation of ammonia, nitrate, and nitrite removal from wastewater using a proprietary blend of bacteria known as BiOWiSH^TM. The degradation rates of ammonia, nitrate, and nitrite for Aqua were determined using wastewater at the San Luis Obispo Water Resource Recovery Facility (SLO WRRF). Laboratory and field experiments were conducted to test how Aqua compared with natural bacteria for removal of nitrogen compounds. Preliminary data suggested that Aqua performed nitrate removal best in SLO WRRF wastewater at the secondary clarifier. Aqua could perform anoxic and aerobic denitrification in secondary clarifier wastewater. In mineral media, Aqua removed …

Removal Of Nitrates From Stormwater Using Nanoclays, Rubia Siddiqi

Master's Theses

Creeks and rivers are often polluted as a result of stormwater runoff that carries various contaminants in to open water bodies, causing adverse environmental and health effects. Low impact development (LID) techniques are currently employed to treat this runoff prior to discharge. Nitrate, however, is not consistently removed by these LID techniques. This study analyzed the ability of several nanoclays to remove nitrate in runoff and determined the feasibility of using them as a soil supplement for LID implementation. Six different nanoclays and HCl-treated clays were compared (pre-modified trimethyl stearyl ammonium nanoclay, pre-modified dimethyl dialkyl amine nanoclay, unmodified hydrophilic bentonite, …

Intuition: Role, Biases, Cognitive Basis, And A Hypothetical Synergistic Explanation Of Intuitive Brain Operations, Jens G. Pohl

Collaborative Agent Design (CAD) Research Center

This paper explores the characteristics of the intuitive responses that are generated by our brain continuously in an automatic and effortless manner. However, while intuition is a very powerful mechanism, it is also subject to many biasing influences. The author discusses the role of intuition, examines representative examples of biasing influences, compares cognitive theories of intuition advanced by Simon (2002), Klein (2003 and 1999), and Kahneman (2011), and then advances a hypothetical explanation of the neurological operations underlying intuition based on Hebbian rules (Hebb 1949) of plasticity in combination with synergetic principles.

A Letter From Dean Phil Bailey, Phil Bailey

Symposium

Dean Phil Bailey of the College of Science and Mathematics at California Polytechnic State University, San Luis Obispo discusses the tremendous impact the recent donation from Bill and Linda Frost will have on the university's "Learn by Doing" opportunities.

Radiation Exposure During Space Travel: Using Radioisotopes For A Comparative Study Of Human Feces And Urine As Integrated Shield Components, Noah L. Falck

Symposium

Earth’s atmosphere and magnetosphere deflect and absorb the majority of harmful radiation traversing Space; however, once outside Low Earth Orbit (LEO), payloads are exposed to Galactic Cosmic Rays (GCR) and Solar Particle Events (SPEs). While humans possess capabilities that hardware does not, we are uniquely vulnerable to radiation. Detrimental effects range from nausea and dizziness brought by intense, short term doses to increased cancer risk and impaired cognitive function associated with chronic exposure. This paper aims to explore the use of human waste (feces and urine) as radiation shields in a comparative study of urine v. water and hydrated v. …

Socioeconomic Status, Air Quality And Geographic Variation In Emergency Room Visits For Acute Bronchitis On The California Central Coast, Sean Lang-Brown, Heather W. Starnes, Gary B. Hughes

Symposium

IMPORTANCE: Analysis of geospatial variation in acute bronchitis due to socioeconomic and environmental factors can allow the efficient delivery of resources to populations most at risk.

OBJECTIVE: We sought to determine if small scale variation in socioeconomic factors and emergency room (ER) visits for acute bronchitis are associated in small cities or rural communities. We also modeled the effects of air quality on daily rates of ER visits for acute bronchitis in the context of socioeconomic factors to investigate modifying relationships.

DESIGN, SETTING, AND PARTICIPANTS: We examined ER visits for acute bronchitis in San Luis Obispo and Santa Barbara counties …

Editor's Note, Jenna Vacca

Symposium

A note from the Editor-In-Chief

Symposium Volume 4, Issue 1, California Polytechnic State University, San Luis Obispo

Symposium

Collection of research projects conducted by students of the College of Science and Mathematics at California Polytechnic State University

Heavy Metals In Seaweeds From A Polluted Estuary In Coastal Maine, Ian D. Medeiros, Arthur C. Mathieson, Nishanta Rajakaruna

Biological Sciences

Seaweeds (macroalgae) accumulate heavy metals from seawater and can therefore serve as biological monitors of marine pollution. In this paper, we present data on the tissue chemistry of seaweeds from the area of Callahan Mine, an intertidal copper and zinc mine in Brooksville, ME, USA, abandoned in the 1970s and now designated as a Superfund site. The mine is located on the Goose Pond estuary, which drains into the ocean via a tidal waterfall at Goose Falls. Seaweed tissue samples from this estuary had the same relative concentrations of metals as had been reported previously in water samples from this …

"Subjects-Of-A-Life," Entelechy, And Intrinsic Teleology, Josephine Donovan

Between the Species

Abstract

This article explores the question of what is a “subject-of-a-life,” Tom Regan’s celebrated term for a living entity to whom, he argued, we humans owe ethical duty. I return to ancient concepts of entelechy and teleological organization, arguing that, stripped of theological implications, they provide a usable basis for modern theorizing about organism and an ethical foundation for condemning such practices as transgenic engineering. Every creature, it is argued, has its own inherited formal identity, which it strives to sustain. This reality is ethically pertinent knowledge which humans are obliged to respect and honor.

Bonipak Produce Inc., Steven Partie, Grant Copeland, David Minney

Case Studies in Agribusiness

Bonipak grows, packs and ships fresh produce. As the 10th largest (by acreage) agricultural firm in the western US, it supplies a wide range of produce to national chain retailers such as Costco, Safeway, Kroger and Loblaw. The case discusses Bonipak’s Seed to Sale approach, in which they aim to satisfy their buyers, who demand consist, high quality produce for the final retail customer. Bonipak has dealt with issues including labor and water, and has worked with sustainability, in terms of “farming with the future in mind”.

Deconstructing Medicine: The Intersections Of Racism And Health Disparities Within Pre-Medical Education, Allison F. Dormanesh

Ethnic Studies

The purpose of this project is to evaluate ways in which historical racism and lack of it in pre- medical curriculum shapes future health professionals and results in negative medical treatment of under-represented groups. Research found in the literature review reveals a strong history of racism within medical practice and medical research, as well as unconscious bias that follows knowledge taught during undergraduate education and onwards. An intersectionality approach is used to show the affect of race and class on health disparities and unethical abuse. This research includes data analyzing the pre-medical curriculums of the ten pre-medical universities that produce …

Influence Of Silver Nanoparticle Surface Charge On Cytotoxic Efficacy Against Cancer Cells, Elliot Christian Frey

Materials Engineering

Silver and silver-based products are known to cause cytotoxic effects to both microbes and eukaryotic cells. Because of this property, silver nanoparticles (AgNPs) are being studied for their potential in targeted tumor treatments. Previous studies with microbes suggest that AgNPs with cationic capping agents possess enhanced cytotoxicity by virtue of Coulombic attraction between the nanoparticle and the negatively-charged cell wall. Since animal cells possess similar negatively-charged plasma membranes, this research hypothesized that human cells would be more susceptible to positively-charged AgNPs than to negatively-charged AgNPs. To investigate this theory, cancerous cervical cells (HeLa) and healthy fibroblast cells (3T3) were subjected …

Romberg Tiburon Center (Rtc) Theater Repurpose 2017, Thomas Fowler, Iv, Kevin Dong

Architecture

The team that worked on San Francisco State University’s Romberg Tiburon Center (RTC) for Environmental Studies was composed of a talented group of undergraduate and graduate students. We thank the RTC and John Kern for providing the opportunity to research and redesign this Building 54 Theater Project. The Project will restore the historical theater, provide RTC with an inspiring presentation space, and commemorate the history of the site.

Peromyscus Boylii And Peromysus Californicus Differ In Physical Characteristic Measurements, Puja M. Kasondra

Biological Sciences

I provide a comparison of physical characteristics between Peromyscus boylii and Peromyscus californicus. All mice compared were captured in the dominant regions of the Los Padres National Forest during three different years – 2005, 2011, and 2014. The dominant regions of the Los Padres National Forest include Riparian, Woodlands, and Chaparral. All characteristics, ear (from notch), head and body, hind foot, tail, and weights, were compared between males of each species and then between females of each species. All data were analyzed in JMP 12. Out of all the characteristics, tail and weight had the greatest difference between the …

The Relationship Between Structural Parameters And Mechanical Properties Of Cactus Spines, Jorge Armando Martinez, Pamela Liz Szeto, Theresa Mae Stewart

Materials Engineering

Considering an increasing interest in renewable, biodegradable resources that exhibit excellent mechanical properties, 24 species of cactus spines were investigated using three-point bend testing, X-ray diffraction (XRD) for structural parameters, and scanning electron microscopy (SEM) to analyze fracture surfaces. Additionally, a density of about 1.3 g/cm3 was measured for each spine utilizing the displacement method, closely matching existing data from literature. The flexural modulus varied greatly between species, ranging from 1.22 GPa (Echinocactus polycephalus) to 43.58 GPa (Stenocereus thurberi). In addition, flexural strength and strain to failure was also measured for each spine. XRD analysis of …

Linking Large Scale Ocean-Atmospheric Patterns With Recruitment In Kellet’S Whelk (Kelletia Kelletii), Katherine N. Rodriguez

Biological Sciences

Global warming influences the biogeography of many marine and terrestrial species. Understanding species range shifts is ecologically and socioeconomically important when guiding management decisions for ecosystems exposed to a rapidly changing climate. In this natural experiment, I follow Danielle Zacherl’s methods (Zacherl et al. 2003) to study the effects of large-scale ocean-atmospheric patterns on recruitment of a marine snail, Kellet’s whelk (Kelletia kelletii); these organisms recently expanded their range North past the geographic barrier of Point Conception to Monterey, CA, USA. I use shell length data collected at 32 subtidal rocky reef kelp forest sites in 2015 (before …

Design Of A Finger Lime Loading System, Joel Jameson Hitchen

Industrial and Manufacturing Engineering

Automation for post harvest processing of finger limes is required to meet demand for the new citrus fruit being introduced to United States of America food and agriculture market. As labor wages rise, and demand climbs for finger lime product a creative solution is needed to eliminate human labor and reduce the manual input needed to process finger limes. Building on an already successful processing tool, a semi-­automated loading system was designed and implemented to overcome the problem.

Poly Drop, Zachary T. Scott, Lilly J. Paul

Computer Engineering

Poly Drop is a software interface to control an Open Drop digital micro-fluidics system. We obtained a hardware system from Gaudi labs. Our task was to create a Graphical User Interface that made the control of the device easier and more automated for better testing. We created software that had 3 parts: a control GUI, arduino code to control the hardware, and Image Analysis that gives the user information such as location and color of liquid drops as they move across the electrode grid of the Open Drop system. The GUI was developed using Java Swing. The communication between the …

The Recovery Of Protein From Egg Yolk Protein Extraction Granule Byproduct, Irene Jennifer Kaufman

Master's Theses

In addition to proving an excellent source of nutrients, eggs are used in the food, cosmetic, and biotechnology industries for their rheological and bioactive properties. Much of the potential for the added value is in individual components of the egg, rather than the whole egg. At low speed centrifugation, yolk separates into two distinct fractions—granules and plasma. It is becoming increasingly popular in the industry to remove the plasma fraction of the egg yolk to use for its livetins, particularly immunoglobulin Y, leaving behind a granule by-product (“yellow cake”). Previous research has shown potential added-value from the granule fraction, especially …

The Design, Manufacture, And Testing Of A Novel Adhesion System For A Climbing Vehicle, Michael William Schier

Master's Theses

We present the design and fabrication of a prototype wall-climbing vehicle employing a unique combined locomotion and adhesion system in which the adhesive vacuum is transmitted through moving, perforated treads. Implementing the adhesion/drive system involved a broad range of design challenges, including: developing reliable sealing of sliding and static interfaces, understanding the frictional interactions between the drive treads and various vehicle components and surfaces on which they ride, as well as designing for lightness, manufacturability, and adjustability. The clean sheet design presented in this thesis was taken from concept to functioning prototype in less than 6 months, requiring a considered …

Ecg Classification Using Adaptive Neuro-Fuzzy Inference System, Jason N. Rivera, Kelsey C. Rodriguez

Electrical Engineering

ECG classification using Adaptive Neuro-Fuzzy Inference System (ANFIS), sponsored by Professor Yu, involves the diagnosis of six cardiovascular conditions by analyzing one single neural network. Today’s ECG signal instrumentation does not have the ability to characterize cardiovascular diseases without a doctor’s complete evaluation and diagnosis. Our project gives a promising solution to the inability in the current market’s ECG signal instrumentation to correctly evaluate and diagnose cardiovascular diseases. ECG signal reportings is a non-invasive process that will lead to many more applications of advanced signal processing and data analysis/diagnosis of cardiovascular diseases. The inputs to the ANFIS are annotations of …