Digital Commons Network^™

A Study Of Genetic Diversity Among Different Population Of Orthochirus Sp. Based On Cytochrome C Oxidase Subunit I And 16srrna Sequencing, Hedieh Jafari, Fatemeh Salabi, Alireza Forouzan

Turkish Journal of Zoology

Orthochirus sp. (Family: Buthidae) is widespread throughout the world. There are 17 species, 7 of which have been reported in Khuzestan Province of Iran, including the most diverse species related to the scorpion. In the present study, specimens of O. iranus, O. farzanpay, O. zagrosensis, and O. stockwelli were collected from different areas in this province. Phylogenetic analysis was conducted through duplicating and sequencing the cytochrome c oxidase subunit 1 (COXI) and 16SrRNA genes and comparing their genetic diversity. Orthochirus iranus had the highest genetic distance from O. stockwelli, while the lowest genetic distance was observed between O. farzanpay and …

First Contribution On Distribution, Abundance, And Species Richness Of Blowfly Species (Diptera) Of Isparta Province With Five New Records For The Turkish Fauna, Ozan Demi̇rözer, Gamze Pekbey, Rüstem Hayat, Azi̇me Herdoğan, Jelena Acanski, Marija Milicic, Asi̇ye Uzun

Turkish Journal of Zoology

Despite the increasing importance of species richness of blowfly fauna and their environmental, medical, and agricultural importance in the world they are poorly studied in Turkey. This study was carried out in 2014 and 2015 to determine the distribution, abundance, and species richness of blowfly species in Isparta Province of Turkey. A total of 15 species (10 from Calliphoridae, 4 from Polleniidae, and 1 from Rhiniidae) were identified from 13 different localities. The adult specimens were obtained from areas of organic and decayed organic matters, waste and dumpsite, surrounding waste water deposits, and flowering plants. While all the species were …

Ungulate Activity: Effects Of Season, Hunting Pressure, And Plant Type, Alex Capone Lopez

2020 Symposium Posters

Quaking Aspen (Populus tremulodies) is considered priority habitat because it supports diverse understory flora and provides critical nesting and foraging habitat for wildlife. Aspen populations in western North America have declined due to fire suppression and browsing. Turnbull National Wildlife Refuge in eastern Washington addressed declining aspen with prescribed burns. However, aspen growth stimulated by burning was offset by browsing, especially by Elk (Cervus elaphus). Increasing elk numbers prompted initiation of a limited hunt to cull and disperse elk off refuge. To address the impact of these management strategies, we used remote video cameras to monitor …

Identification Of Causes Of Death Of Baikal Seal (Pusa Sibirica Gmelin, 1788), Nina Ryadinskaya, Ivan Meltsov, Maria Tabakova, Inna Anikienko, Svetlana Sayvanova, Alena Molkova, Olga Ilyina, Tatyana Pomoinitskaya

Turkish Journal of Zoology

The Baikal seal is the only endemic mammal of Lake Baikal. In late October 2017, 132 dead Baikal seals were found on the shore of the lake. To identify causes of death, postmortem necropsy, virological, chemical toxicological, microbiological, and parasitological studies were carried out. Several hypotheses for explaining the causes of the deaths were put forward. The most probable causes are heart failure and asphyxia due to echo sounders (sonar). The causes were confirmed by the results of histological examination of the hearts and lungs of a large number of dead seals found on the southern shore of Lake Baikal …

A Literature Review Of Horn And Horn-Like Structures In Vertebrates To Correlate Placement To Function, Behavior, And Niche., J T. Cottingham

Biology Papers and Presentations

In this paper, the true horns of bovids are compared to the many horn-like structures found throughout the animal kingdom. Literary sources were reviewed for a variety of horn-like structures. The review was limited to extinct and extant terrestrial vertebrates. 3D models of these organisms' skulls and “horns” were created or acquired and 3D printed at the same scale to illustrate their differences and similarities and to analysis of their comparative size easier between large and small genera.

Possible Implications Of Weather Variation On Reproductive Phenology Of Europeancommon Toad In Southeastern Europe, Bogdan Jovanovic, Ethan J. Kessler, Marija Ilic, Jelena Corovic, Natasa Tomasevic-Kolarov, Christopher A. Phillips, Jelka Crnobrnja Isailovic

Turkish Journal of Zoology

We tracked yearly variation in breeding phenology in relation to weather parameters in a common European toad population from the southeastern part of its range. Phenological data were collected from 2001 to 2003 and from 2011 to 2017 and compared to open-access daily weather data from a nearby weather station. Data analysis revealed no significant effect of weather on initiation of breeding and a negative relationship between mean daily humidity and mean cloud cover on the duration of breeding season (P = 0.03). Further analysis showed a decreasing trend in breeding season humidity in the past 70 years. Our results …

Genetic Structure And Population Dynamics Of The Silver Pheasant(Lophura Nycthemera) In Southern China, Chaoying Zhu, Wenjing Lu, Guanglong Sun, Jiang Chen, Zhen Zhang, Liangjie Yu, Peng Chen, Yuqing Han, Zhifeng Xu, Junpeng Bai, Dongqin Zhao, Luzhang Ruan

Turkish Journal of Zoology

In southern China, the silver pheasant (Lophura nycthemera) is a widespread species due to complex topography and sufficient habitats and food resources. We investigated the microsatellite and mitochondrial DNA control region sequence of 115 individuals from 7 locations in China to study population dynamics of the silver pheasant during the Pleistocene. The neutrality test and mismatch distribution analyses showed that population expansion began in the interglacial period (76,053 years ago), and the latest common ancestor appeared approximately 970,300 years ago. Most populations exhibited a high level of genetic diversity as well as gene flow. Results of phylogenetic trees and network …

Taxonomic Investigation Of The Genus Ablepharus (Sauria; Scincidae) With Molecular Andmorphological Methods In Anatolian Populations, Emi̇n Bozkurt, Kurtuluş Olgun

Turkish Journal of Zoology

Ablepharus Lichtenstein, 1823, which includes ten species, is distributed in eastern Europe and Asia. Four species are recorded in Turkey: A. kitaibelii, A. chernovi, A. bivittatus, and A. budaki. After molecular and morphological studies in Anatolia, the phylogenetic relationship of the genus is still very complicated. Here, we investigate the taxonomic status of Ablepharus in Anatolia using morphological and molecular methods. The genetic structure of Ablepharus populations in Anatolia was analyzed using both the nuclear (CMOS) and mitochondrial (cyt b and COI) gene regions. The maximum likelihood and Bayesian inference methods were applied for phylogenetic tree reconstruction, together with calculation …

Length-Weight Relationships Of Invasive Mosquitofish(Gambusia Holbrooki Girard, 1859) In 23 River Basins Of Turkey, Irmak Kurtul, Hasan Musa Sari

Turkish Journal of Zoology

Gambusia holbrooki Girard, 1859 has established very strong populations in freshwater resources in Turkey after being introduced into Amik Lake (Hatay/Antakya) at the beginning of the 1920s. In this study, it was aimed to determine the female:male ratios and length-weight relationships of G. holbrooki populations in Turkey, which are considered as a threat, especially for endemic species. G. holbrooki specimen were sampled at total of 66 locations, including 39 lentic and 27 lotic locations, between 2016 and 2017. The female:male ratio was 1:0.39 for all of the investigated localities. Length-weight relationships were investigated at 44 sampling locations for the females …

Gulls As Sources Of Environmental Contamination By Colistin-Resistant Bacteria, Alan B. Franklin, Andrew M. Ramey, Kevin T. Bentler, Nicole L. Barrett, Loredana M. Mccurdy, Christina A. Ahlstrom, Jonas Bonnedahl, Susan A. Shriner, Jeffrey C. Chandler

United States Department of Agriculture Wildlife Services: Staff Publications

In 2015, the mcr-1 gene was discovered in Escherichia coli in domestic swine in China that conferred resistance to colistin, an antibiotic of last resort used in treating multi-drug resistant bacterial infections in humans. Since then, mcr-1 was found in other human and animal populations, including wild gulls. Because gulls could disseminate the mcr-1 gene, we conducted an experiment to assess whether gulls are readily colonized with mcr-1 positive E. coli, their shedding patterns, transmission among conspecifics, and environmental deposition. Shedding of mcr-1 E. coli by small gull flocks followed a lognormal curve and gulls shed one strain >101 …

Piscivorous Bird Use Of Aquaculture And Natural Water Bodies In Mississippi, Paul C. Burr, Jimmy I. Avery, Garrett M. Street, Bronson K. Strickland, Brian S. Dorr

United States Department of Agriculture Wildlife Services: Staff Publications

Double crested cormorants (Phalacrocorax auritus) and great egrets (Ardea alba) have an extensive history of human wildlife conflict with the aquaculture industry of western Mississippi, USA, due to

their depredation of cultured catfish (Ictalurus spp.). Although aquaculture is abundant, western Mississippi also contains naturally occurring water bodies that offer alternative forage opportunities to these species. How cormorants or egrets distribute themselves among these 2 foraging options is unknown, but it has been generally assumed each species uses aquaculture disproportionately more because of the high density of available prey. To test this assumption, we surveyed these …

Control Or Eradication: Problems In The Management Of Invasive Birds, Michael L. Avery, Chris J. Feare

United States Department of Agriculture Wildlife Services: Staff Publications

Humans have captured, transported and intentionally released wild birds for centuries (Blackburn et al., 2009). Motivations for such purposeful introductions include food (West and Zhou, 2007), religion (Agoramoorthy and Hsu, 2007), sport (McDowall, 1994), biocontrol (Bennett and Hughes, 1959; Kurdila, 1995) and aesthetics (Ryan, 1906; Thomson, 1922). Many purposeful bird introductions were the work of acclimatization societies, particularly in North America, New Zealand and Australia. These societies were formed in the 19th century by European settlers to transport bird species from their homelands in efforts to establish them in the newly settled regions (Thomson, 1922; Dunlap, 1997). As a result …

Ticks On Lizards: Parasite-Host Interactions Of The Southern Alligator Lizard (Elgaria Multicarinata) In Washington State, Emma Houghton

Undergraduate Honors Theses

I investigated interactions between ectoparasites (ticks) and their host, the southern alligator lizard (Elgaria multicarinata). Alligator lizards are capable of complement-mediated killing of the Lyme disease spirochete carried by ticks and may potentially reduce Lyme disease prevalence by cleansing pathogenic organisms from ticks. Despite this, little is known about host-parasite dynamics in alligator lizards. My goals were to 1) assess patterns of tick presence (i.e. parasite load) on alligator lizards and 2) investigate potential negative effects of ticks on alligator lizards. I sampled lizards during the summer of 2019 near Catherine Creek, along the Columbia River Gorge in southern Washington. …

Ticks On Lizards: Parasite-Host Interactions Of The Southern Alligator Lizard (Elgaria Multicarinata) In Washington State, Emma Houghton

All Undergraduate Projects

I investigated interactions between ectoparasites (ticks) and their host, the southern alligator lizard (Elgaria multicarinata). Alligator lizards are capable of complement-mediated killing of the Lyme disease spirochete carried by ticks and may potentially reduce Lyme disease prevalence by cleansing pathogenic organisms from ticks. Despite this, little is known about host-parasite dynamics in alligator lizards. My goals were to 1) assess patterns of tick presence (i.e. parasite load) on alligator lizards and 2) investigate potential negative effects of ticks on alligator lizards. I sampled lizards during the summer of 2019 near Catherine Creek, along the Columbia River Gorge in southern Washington. …

Invertebrates Should Be Given Ethical Consideration, Marie-Claire Cammaerts

Animal Sentience

Invertebrates are far more numerous than vertebrates. Most of them are essential to the survival of humanity. Their physiology, behavior, know-how, and cognitive abilities are often as complex as those of vertebrates. Invertebrates should be considered and studied as are vertebrates, i.e., ethically, and cautiously.

Problems With Basing Insect Ethics On Individuals’ Welfare, Susana Monsó, Antonio J. Osuna-Mascaró

Animal Sentience

In their target article, Mikhalevich & Powell (M&P) argue that we should extend moral protection to arthropods. In this commentary, we show that there are some unforeseen obstacles to applying the sort of individualistic welfare-based ethics that M&P have in mind to certain arthropods, namely, insects. These obstacles have to do with the fact that there are often many more individuals involved in our dealings with insects than our ethical theories anticipate, and also with the fact that, in some sense, some insects count as more than an individual and, in another sense, they sometimes count as less than an …

Lessons From Miniature Brains: Cognition Cheap, Memory Expensive (Sentience Linked To Active Movement?), Giorgio Vallortigara

Animal Sentience

Studies on invertebrate minds suggest that the neural machinery for basic cognition is cheap, and that bigger brains are probably associated with greater memory storage rather than more advanced cognition. Sentience may be linked to feedforward mechanisms (Reafferenzprinzip) that allow organisms with active movement to distinguish active and passive sensing. Invertebrates may offer special opportunities for testing these hypotheses.

Genetic Analysis Of The Endangered Gray Bat Species (Myotis Grisescens), Emma Fitzgerald

Lewis Honors College Capstone Collection

This study attempts to analyze the genetics using specific haplotype sequences of the endangered gray bat to determine genetic events that have happened in the past as well as determining how the species population has changed over time. We were able to conduct a Tajima’s D test to investigate whether a potential bottleneck has occurred. A linear regression of the genetic vs. geographical distance was produced to investigate the patterns of haplotype distribution. The species past distribution was compared to the current distribution using known collected specimens. A map of future predictions was constructed using present and future climate layers …

Spring Field Report, March-May 2020, W. Ross Silcock

Nebraska Bird Review

Although there were numerous early arrival dates, most were in the range of historically earliest expected dates; notable, however, was a lone record-early Whiterumped Sandpiper, nicely photographed. Record late by a month was a juvenile Redtailed (Harlan’s) Hawk, also confirmed by photo. Perhaps most prominent this spring were the large numbers of several species. Most eye-popping were record spring totals of 22 Glossy Ibises, 11 Yellow-bellied Flycatchers, 14 Veeries, including five in the Panhandle, 48 Gray-cheeked Thrushes, 20 Bay-breasted Warblers, not long ago a rare bird in spring, 45 Golden-winged Warblers and 27 Canada Warblers, both of which were about …

The Nebraska Bird Review, Volume 88 March 2020 Number 1

Nebraska Bird Review

Winter Field Report, Dec. 2019 - Feb. 2020, by W. Ross Silcock …2

2019-2020 Christmas Bird Counts …18, 27-41

Annual Color Photo Section …19-26

Annual Treasurer's Report for 2019, by Jan Johnson …42

Subscription and Organization Information …43

Regional Variation In Ventral Body Color And Pattern In The Western Ratsnake, Pantherophis Obsoletus (Reptilia: Serpentes: Colubridae), In Arkansas, Stanley E. Trauth

Journal of the Arkansas Academy of Science

Pantherophis obsoletus, the Western Ratsnake (a.k.a., black ratsnake or chicken snake), is a large colubrid species widely distributed throughout the central and southcentral United States west of the Mississippi River (Powell et al. 2016). This species has received considerable attention with its early taxonomic history found in Neill (1949) and Dowling (1952) and its current phylogeographic status examined by Burbrink et al. (2000), Burbrink (2001), and Gibbs et al. (2006). Dorsal body color and pattern played an important role in resolving the early taxonomic issues within this ratsnake species complex, whereas mtDNA was utilized in the more recent phylogeographic analyses …

Finding Fishers: Determining The Distribution Of A Rare Forest Mesocarnivore In The Northern Rocky Mountains, Jessica M. Krohner

Graduate Student Theses, Dissertations, & Professional Papers

The Northern Rocky Mountain fisher population (Pekania pennanti), is classified as a Species of Greatest Conservation Need and is of special concern to state, federal, and tribal entities. In this thesis, we present methods to effectively survey fishers across the northern Rockies of Idaho and Montana, and provide estimates of fisher distribution at a population range-wide scale through occupancy analyses. We also assess factors that influence fisher occurrence through covariate analyses and identify core fisher habitat in the northern Rockies through spatial occupancy modeling. By sampling broadly across the landscape, we provide baseline distributional data for comparison against …

Selection Of Forage And Avoidance Of Predation Risk By Partially Migratory Mule Deer, Collin Jeffrey Peterson

Graduate Student Theses, Dissertations, & Professional Papers

Migration by ungulates has traditionally been thought of as a strategy that increases access to forage quality or reduces exposure to risk of predation, but the benefits of migration may be waning globally. In partially migratory populations, the persistence of both migrant and resident strategies is an intriguing ecological phenomenon, because migrants and residents often face contrasting fitness consequences. Partial migration is common in mule deer (Odocoileus hemionus), a species that has experienced widespread declines across the western United States during recent decades. Mule deer seldom switch between migratory strategies throughout their lifetime, which may make them less resilient to …

Ecological And Evolutionary Dynamics Of Elephant Rewilding, Lysanne Snijders

Animal Sentience

Baker & Winkler make a thought-provoking contribution to the discussion of what role captive animals could play in nature conservation and how we could get there through rewilding. There certainly is potential for captive Asian elephants, Elephas maximus, to become targets of conservation efforts, but there are also many questions: (1) How much do (behavioral) traits of captive-origin animals differ from their free conspecifics? (2) What predicts the likelihood and strength of social reintegration of captive animals into free populations? (3) How much of an Asian elephant’s functional role in the environment can captive animals still fulfill and how …

Artificial Intelligence And Covid-19: Deep Learning Approaches For Diagnosis And Treatment, M. B. Jamshidi, A. Lalbakhsh, J. Talla, Z. Peroutka, F. Hadjilooei, P Lalbakhsh, M. Jamshidi, L. La Spada, M. Mirmozafari, M. Dehghani, A. Sabet, Sa. Roshani, So. Roshani, N. Bayat-Makou, B. Mohamadzade, Z. Malek, A. Jamshidi, S. Kiani, H. Hashemi-Dezaki, W. Mohyuddin

Faculty Publications

COVID-19 outbreak has put the whole world in an unprecedented difficult situation bringing life around the world to a frightening halt and claiming thousands of lives. Due to COVID-19 & x2019;s spread in 212 countries and territories and increasing numbers of infected cases and death tolls mounting to 5,212,172 and 334,915 (as of May 22 2020), it remains a real threat to the public health system. This paper renders a response to combat the virus through Artificial Intelligence (AI). Some Deep Learning (DL) methods have been illustrated to reach this goal, including Generative Adversarial Networks (GANs), Extreme Learning Machine (ELM), …

Granulosa Cell Proliferation Is Inhibited By Pge2 In The Primate Ovulatory Follicle, Patric S. Lundberg, Gil J. Moskowitz, Carmel Bellacose, Esra Demirel, Heidi A. Trau, Diane M. Duffy

Computer Science Faculty Publications

Prostaglandin E2 (PGE2) is a key paracrine mediator of ovulation. Few specific PGE2-regulated gene products have been identified, so we hypothesized that PGE2 may regulate the expression and/or activity of a network of proteins to promote ovulation. To test this concept, Ingenuity Pathway Analysis (IPA) was used to predict PGE2-regulated functionalities in the primate ovulatory follicle. Cynomolgus macaques underwent ovarian stimulation. Follicular granulosa cells were obtained before (0 h) or 36 h after an ovulatory dose of human chorionic gonadotropin (hCG), with ovulation anticipated 37-40 h after hCG. Granulosa cells were obtained from additional monkeys 36 h after treatment with …

Obituary: Thomas Henry Kunz (1938–2020), Allen Kurta, Winifred F. Frick, M. Brock Fenton, Polly Campbell, Gary F. Mccracken, Robert M. Timm, Hugh H. Genoways

University of Nebraska State Museum: Mammalogy Papers

Dr. Thomas Henry Kunz, an internationally recognized expert on the ecology and behavior of bats and Professor at Boston University, passed away on April 13, 2020 in Dedham, Massachusetts, at the age of 81 as the result of complications from COVID-19. “Tom,” to his many friends and colleagues, was born on June 11, 1938 in Independence, Missouri, to William H. and Edna F. (Dornfeld) Kunz. He married Margaret Louise Brown on December 27, 1962 in Faucett, Missouri, Margaret’s hometown. Two children were born to Margaret and Tom—Pamela Kunz (Jeffrey Kwan) and David Kunz (Nicole, née D’Angelo), and five grandchildren.

As …

Intraspecific Aggression Towards Common Bottlenose Dolphin Calves, Northern Gulf Of Mexico, Errol Ronje, Sarah Piwetz, Heidi Whitehead, Keith D. Mullin

Gulf and Caribbean Research

Infanticide has been widely documented throughout the animal kingdom, and has generally been viewed as an evolved, or adaptive behavior for the perpetrators. Infanticide motivated by increased sexual access to females with calves, or the elimination of potential genetic competition in the form of calf-directed aggression or infanticide, has been proposed for delphinids including killer whales, Indo-Pacific humpback dolphins, Guiana dolphins, and bottlenose dolphins. However, reports of intraspecific aggression towards bottlenose dolphin calves are relatively infrequent, and accounts of confirmed infanticide are rarer still. Reporting instances of intraspecific calf-directed aggression aids researchers to better understand the socio-behavioral context of these …

An Assessment Of Convergence In The Feeding Morphology Of Xiphactinus Audax And Megalops Atlanticus Using Landmark-Based Geometric Morphometrics, Edward Chase Shelburne

Master's Theses or Doctor of Nursing Practice

Convergence is an evolutionary phenomenon wherein distantly related organisms independently develop features or functional adaptations to overcome similar environmental constraints. Historically, convergence among organisms has been speculated or asserted with little rigorous or quantitative investigation. More recent advancements in systematics has allowed for the detection and study of convergence in a phylogenetic context, but this does little to elucidate convergent anatomical features in extinct taxa with poorly understood evolutionary histories. The purpose of this study is to investigate one potentially convergent system—the feeding structure of Xiphactinus audax (Teleostei: Ichthyodectiformes) and Megalops atlanticus (Teleostei: Elopiformes)—using a comparative anatomical approach to assess …

The Effects Of Prescribed Burning And Microhabitat Type On Ant (Formicidae) Functional Groups And A Survey Of Ants In The Dr. Howard Reynolds Nature Area (A Mixed Grass Prairie), Ashley N. Durr

Master's Theses or Doctor of Nursing Practice

This project sought to understand how prescribed burning and microhabitat type impacts Kansas ant functional groups and also whether prescribed burning in different microhabitat types altered the burn’s impact on those functional groups. The Dr. Howard Reynolds Nature Trail, located in Hays, Kansas, was burned in the spring of 2019. The area consists of 2 distinct habitat types: a dry, mixed-grass dominated uphill area and a moist, densely vegetated downhill area. Pitfall trapping was conducted during the summers of the year prior to the burn (2018) and the year following the burn (2019). 15 pitfall traps were spread across each …