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Peningkatan Produktivitas Tanaman Kedelai Kultivar Anjasmoro Asal Benih Terdeteriorasi Dengan Kompos Trichoderma Dan Bokashi, Sumadi, Denny Sobardini Sobarna, Pujawati Suryatmana, Meddy Rachmadi, Erni Suminar

Jurnal Kultivasi

Trichoderma spp merupakan golongan fungi yang bersifat antipatogen, khususnya layu kecambah, sedangkan bokashi merupakan kompos yang diperkaya dengan beberapa mikroba yang bermanfaat bagi pertumbuhan tanaman.Tulisan ini merupakan rangkuman penelitian pot menggunakan kompos Trichoderma spp sebagai pelapis benih terdeteriorasi disertai bokashi kotoran hewan yang dilakukan pada tanah lahan kering dan tanah sawah pada tahun 2014 dan 2017. Percobaan pertama membandingkan efektivitas beberapa agen hayati sebagai pelapis benih pengaruhnya terhadap vigor benih dan hasil tanaman. Hasil percobaan menunjukkan penggunaan kompos Trichoderma hasilnya lebih baik dibandingkan agen hayati lainnya. Hasil percobaan selanjutnya menunjukkan bahwa pelapisan benih dengan 1 sampai 3 g kompos Trichoderma …

Methanogens, Plausible Extraterrestrial Life Forms On Mars, And Their Tolerance To Increasing Concentrations Of Illite Clay, Chandler Kern

Biological Sciences Undergraduate Honors Theses

Methanogens, some of Earth’s most primitive prokaryotic organisms, are candidates for possible life forms capable of inhabiting Mars. Specifically, four different species (Methanobacterium formicicum, Methanococcus maripaludis, Methanosarcina barkeri, Methanothermobacter wolfeii) were analyzed for their tolerance to the presence of illite clay. Illite is a crystalline mineral that has been identified from regions of Mars’s surface. Results indicated that all four species grew with some success in the illite at different concentrations. This experimentation with methanogens’ abilities to survive and reproduce in the presence of illite allows for a more accurate understanding of the potential capability of microbial …

Carbon Sequestration In Grassland Soils Across Arkansas, Marya Jean Mckee

Graduate Theses and Dissertations

The capture, conversion, and long-term storage of carbon dioxide (CO2) as soil organic carbon (SOC), a process known as soil C sequestration, is a possible solution to the current and ever-increasing threat of rising greenhouse gas emissions and global climate change. Tallgrass prairies, which once historically covered the country, are known to accumulate and sequester large amounts of C from the atmosphere deep within the soil, due to their extensive rooting systems. The purpose of this research was to increase understanding of soil C sequestration dynamics and general functioning in disappearing native grassland ecosystems within Arkansas, as well as the …

Assessment Of Soil Properties And Vegetation In A Mounded Native Tallgrass Prairie With An Aquic And Udic Soil Moisture Regime In The Ozark Highlands Region Of Northwest Arkansas, Tyler Joseph Durre

Graduate Theses and Dissertations

Native tallgrass prairies were once considered to be the dominant pre-settlement vegetation type in the eastern third of the Great Plains, but are now designated as America’s most endangered ecosystem due to conversion to agricultural land. Prairie mounds are unique soil features still present in remnant native tallgrass prairies across the United States. The main objective was to determine the effects of soil moisture regime (i.e., aquic and udic), mound position, (i.e., mound summit, backslope, toeslope, inter-mound), soil depth (i.e., 10-cm intervals from 0 to 90 cm), and their interactions on soil physical, chemical, and hydraulic properties in a mounded …

Evaluation Of Soybean Maturity Group And Planting Date In A Soybean-Rice Rotation On Overall Crop Productivity, Carrie Ortel

Graduate Theses and Dissertations

Little is known about the effects of soybean (Glycine max L.) management techniques on soil-nitrogen (N) credit development and its impact on the subsequent rice (Oryza sativa L.) crop’s success. This study was conducted to determine how soybean maturity group (MG) and planting date effect overall soybean productivity and its influence on the following rice crop. Various soybean planting dates (optimum and late) and MGs (3.5, 4.7, 5.4, and 5.6) were grown and followed in rotation with a rice crop. Six rates of pre-flood fertilizer-N (0, 44, 89, 134, 179, 224 kg N ha-1) were applied to the rice crop. …

Reduced Carbon Use Efficiency And Increased Microbial Turnover With Soil Warming, Jianwei Li, Gangsheng Wang, Melanie A. Mayes, Steven D. Allison, Serita D. Frey, Zheng Shi, Xiao-Ming Hu, Yiqi Luo, Jerry M. Melillo

Agricultural and Environmental Sciences Faculty Research

Global soil carbon (C) stocks are expected to decline with warming, and changes in microbial processes are key to this projection. However, warming responses of critical microbial parameters such as carbon use efficiency (CUE) and biomass turnover (rB) are not well understood. Here, we determine these parameters using a probabilistic inversion approach that integrates a microbial-enzyme model with 22 years of carbon cycling measurements at Harvard Forest. We find that increasing temperature reduces CUE but increases rB, and that two decades of soil warming increases the temperature sensitivities of CUE and rB. These temperature sensitivities, which are derived from decades-long …

Modulation Of Auxin And Cytokinin Responses By Early Steps Of The Phenylpropanoid Pathway, Jasmina Kurepa, Timothy E. Shull, Sumudu S. Karunadasa, Jan A. Smalle

Plant and Soil Sciences Faculty Publications

Background: The phenylpropanoid pathway is responsible for the synthesis of numerous compounds important for plant growth and responses to the environment. In the first committed step of phenylpropanoid biosynthesis, the enzyme phenylalanine ammonia-lyase (PAL) deaminates L-phenylalanine into trans-cinnamic acid that is then converted into p-coumaric acid by cinnamate-4-hydroxylase (C4H). Recent studies showed that the Kelch repeat F-box (KFB) protein family of ubiquitin ligases control phenylpropanoid biosynthesis by promoting the proteolysis of PAL. However, this ubiquitin ligase family, alternatively named Kiss Me Deadly (KMD), was also implicated in cytokinin signaling as it was shown to promote the degradation of …

Spatial Variation In Throughfall, Soil, And Plant Water Isotopes In A Temperate Forest, Gregory R. Goldsmith, Scott T. Allen, Sabine Braun, Nadine Engbersen, Clara Romero González-Quijano, James W. Kirchner, Rolf T. W. Siegwolf

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Studies of stable isotopes of water in the environment have been fundamental to advancing our understanding of how water moves through the soil‐plant‐atmosphere continuum; however, much of this research focuses on how water isotopes vary in time, rather than in space. We examined the spatial variation in the δ¹⁸O and δ²H of throughfall and bulk soil water, as well as branch xylem and bulk leaf water of Picea abies (Norway Spruce) and Fagus sylvatica (Beech), in a 1 ha forest plot in the northern Alps of Switzerland. Means and ranges of water isotope ratios varied considerably …

Microbial Diversity In Urban Environments: Concern For Antibiotic Resistance, Ality Aghedo, Mangala Tawde, Nazrul I. Khandaker

Publications and Research

We are almost oblivious to the presence of microorganisms in our daily lives, but they exist and come into contact with us all the time. While some bacteria are harmless, and even beneficial, other bacteria can cause infections. A common treatment to bacterial infections is antibiotics and the success of an antibiotic depends on the resistance of the bacteria to the antibiotic. We conducted experiments to identify the types of bacteria that can be found on surfaces or within soil environments that come into contact with a vast number of people on a daily basis and how this can affect …

Managing Risk In Grazing Operations, Christopher D. Teutsch, Kenneth H. Burdine

Kentucky Grazing Conference

Risk is an inherent part of agricultural production systems. Crane and coworkers (2013) identified five primary areas of risk in grazing operations: 1) MARKETING risk, 2) PRODUCTION risk, 3) LEGAL risk, 4) HUMAN risk, and FINANCIAL risk. These types of risk are described in the accompanying publication entitled “Controlling Risk in Grazing-Based Production Systems” by J. Parsons. This article will discuss the risk associated with “production” in grazing systems, focusing specifically on managing drought in grass based production operations.

A Novel Shortwave Infrared Proximal Sensing Approach To Quantify The Water Stability Of Soil Aggregates, Azadeh Gholoubi, Hojat Emami, Scott B. Jones, Markus Tuller

Plants, Soils, and Climate Faculty Publications

Soil structure and aggregate stability (AS) are critical soil properties affecting water infiltration, root growth, and resistance to soil and wind erosion. Changes in AS may be early indicators of soil degradation, pointing to low organic matter (OM) content, reduced biological activity, or poor nutrient cycling. Hence, efficient and reliable AS measurement techniques are essential for detection, management, and remediation of degraded soil resources. Here we quantify soil AS by developing a novel proximal sensing technique based on shortwave infrared (SWIR) reflectance measurements. The novel approach is similar to the well-documented high energy moisture characteristic (HEMC) method, which yields a …

Nutrient Addition And Drought Interact To Change The Structure And Decrease The Functional Diversity Of A Mediterranean Grassland, Carla Nogueira, Alice Nunes, Miguel N. Bugalho, Cristina Branquinho, Rebecca L. Mcculley, Maria Conceição Caldeira

Plant and Soil Sciences Faculty Publications

Anthropogenic activities are increasing nutrient availability and altering precipitation regimes. This may lead to critical changes in grasslands functioning. This is particularly important for grasslands in the Mediterranean Basin that have evolved in nutrient poor soils, and where more frequent and prolonged droughts are projected to occur. However, there is limited knowledge regarding the interacting effects of multiple nutrient inputs and rainfall variability on the plant functional structure and diversity of Mediterranean grasslands. We conducted a nutrient addition experiment in a Mediterranean grassland during four contrasting precipitation years. We established four treatments that varied in the number of added nutrients, …

Iac Gene Expression In The Indole-3-Acetic Acid-Degrading Soil Bacterium Enterobacter Soli Lf7, Isaac V. Greenhut, Beryl L. Slezak, Johan H. J. Leveau

Plant and Soil Sciences Faculty Publications

We show for soil bacterium Enterobacter soli LF7 that the possession of an indole-3-acetic acid catabolic (iac) gene cluster is causatively linked to the ability to utilize the plant hormone indole-3-acetic acid (IAA) as a carbon and energy source. Genome-wide transcriptional profiling by mRNA sequencing revealed that these iac genes, chromosomally arranged as iacHABICDEFG and coding for the transformation of IAA to catechol, were the most highly induced (>29-fold) among the relatively few (iac cluster were genes for a major facilitator superfamily protein (mfs) and enzymes of the β-ketoadipate pathway (pcaIJD-catBCA), which channels …

Biomass Production Of Herbaceous Energy Crops In The United States: Field Trial Results And Yield Potential Maps From The Multiyear Regional Feedstock Partnership, Do Kyoung Lee, Ezra Aberle, Erik K. Anderson, William Anderson, Brian S. Baldwin, David Baltensperger, Michael Barrett, Jürg Blumenthal, Stacy Bonos, Joe Bouton, David I. Bransby, Charlie Brummer, Pane S. Burks, Chengci Chen, Christopher Daly, Josh Egenolf, Rodney L. Farris, John H. Fike, Roch Gaussoin, John R. Gill, Kenneth Gravois, Michael D. Halbleib, Anna Hale, Wayne Hanna, Keith Harmoney, Emily A. Heaton, Ron W. Heiniger, Lindsey Hoffman, Chang O. Hong, Gopal Kakani, David Williams, Linda Williams

Plant and Soil Sciences Faculty Publications

Current knowledge of yield potential and best agronomic management practices for perennial bioenergy grasses is primarily derived from small‐scale and short‐term studies, yet these studies inform policy at the national scale. In an effort to learn more about how bioenergy grasses perform across multiple locations and years, the U.S. Department of Energy (US DOE)/Sun Grant Initiative Regional Feedstock Partnership was initiated in 2008. The objectives of the Feedstock Partnership were to (1) provide a wide range of information for feedstock selection (species choice) and management practice options for a variety of regions and (2) develop national maps of potential feedstock …

Investigation Of Biogeochemical Mechanisms Of Greenhouse Gas Production In The Urban Hudson River Estuary, Brian Alan Brigham

Dissertations, Theses, and Capstone Projects

Coastal megacities deposit significant amounts of carbon (C), nitrogen (N) and other pollutants into surrounding waters. These inputs, including wastewater and surface water runoff, may affect estuarine and adjacent wetland biogeochemical cycles, microbial production and ultimately greenhouse gas (GHG) efflux. In many megacities pollutant loading is typically greatest after periods of precipitation when the volume of wastewater and storm water runoff exceeds local sanitation capacity, resulting in the discharge of raw sewage into adjacent waters. These combined sewage overflow (CSO) events have received considerable attention primarily due to their potential impact on human health and eutrophication. However, whether these events …

Engineered Nanoparticles Interact With Nutrients To Intensify Eutrophication In A Wetland Ecosystem Experiment, Marie Simonin, Benjamin P. Colman, Steven M. Anderson, Ryan S. King, Matthew T. Ruis, Astrid Avellan, Christina M. Bergemann, Brittany G. Perrotta, Nicholas K. Geitner, Mengchi Ho, Belen De La Barrera, Jason M. Unrine, Gregory V. Lowry, Curtis J. Richardson, Mark R. Wiesner, Emily S. Bernhardt

Plant and Soil Sciences Faculty Publications

Despite the rapid rise in diversity and quantities of engineered nanomaterials produced, the impacts of these emerging contaminants on the structure and function of ecosystems have received little attention from ecologists. Moreover, little is known about how manufactured nanomaterials may interact with nutrient pollution in altering ecosystem productivity, despite the recognition that eutrophication is the primary water quality issue in freshwater ecosystems worldwide. In this study, we asked two main questions: (1) To what extent do manufactured nanoparticles affect the biomass and productivity of primary producers in wetland ecosystems? (2) How are these impacts mediated by nutrient pollution? To address …

Invasive-Plant-Removal Frequency—Its Impact On Species Spread And Implications For Further Integration Of Forest-Management Practices, Bernabas Wolde, Pankaj Lal

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

For a given invasive plant species and control method, effective invasive plant eradication requires regular monitoring and management. While most previous studies characterize invasive plant species, develop appropriate control methods, or prioritize species for management using aggressiveness and other considerations, few study why some forestland owners are less likely than others to regularly remove invasive plant species. Such information is useful in prioritizing and targeting forestland owners who are at greater risk for invasion, with the stands threatening adjacent forestlands. Towards this end, we surveyed 1800 forestland owners in Virginia and Texas. We use data on forestland owners’ socioeconomics and …

Pengaruh Pupuk Hayati Dan Pengapuran Terhadap Produktivitas Kedelai Di Tanah Inceptisol Jatinangor, Aep Wawan Irwan, Tati Nurmala

Jurnal Kultivasi

Kedelai merupakan tanaman pangan dengan kandungan protein tinggi sebagai bahan baku utama berbagai makanan, sehingga kebutuhan kedelai di Indonesia selalu tinggi. Hasil kedelai dapat ditingkatkan melalui aplikasi pupuk hayati dan pengapuran. Penelitian ini dilaksanakan di Kebun Percobaan Fakultas Pertanian Universitas Padjadjaran, Jatinangor, Sumedang pada ordo tanah Inseptisol. Penelitian dilakukan dari Maret 2017 sampai Juni 2017. Rancangan percobaannya adalah Rancangan Acak Kelompok, terdiri dari sembilan perlakuan, yaitu tanpa pupuk hayati dan tanpa pengapuran (kontrol); pupuk hayati 5 liter/ha + tanpa pengapuran; pupuk hayati 8 liter/ha + tanpa pengapuran; tanpa pupuk hayati + pengapuran 140 kg/ha; pupuk hayati 5 liter/ha + pengapuran …

Pemanfaatan Beberapa Jenis Urin Ternak Sebagai Pupuk Organik Cair Dengan Konsentrasi Yang Berbeda Pada Tanaman Kelapa Sawit (Elaeis Guineensis Jacq.) Di Pembibitan Utama, Bisri Alvi, Mira Ariyanti, Yudithia Maxiselly

Jurnal Kultivasi

Pembibitan merupakan tahapan awal dalam budidaya tanaman kelapa sawit, kualitas bibit akan mempengaruhi hasil yang akan diperoleh nantinya. Faktor yang mempengaruhi pertumbuhan bibit diantaranya adalah ketersediaan unsur hara yang dapat diperoleh dari pemberian pupuk anorganik dan organik. Pemberian pupuk anorganik tanpa diimbangi pupuk organik dapat merusak sifat tanah, sehingga diperlukan pupuk organik yaitu dengan memanfaatkan urin ternak sebagai pupuk organik cair, dengan menambahkan pupuk organik cair pada tanah, maka dapat membantu proses pertumbuhan tanaman karena pupuk organik cair urin ternak mengandung hormon pertumbuhan bagi tanaman serta mudah diserap tanaman. Penelitian dilakukan di Kebun Percobaan Ciparanje, Fakultas Pertanian, Universitas Padjadjaran, Kabupaten …

Influence Of Cover Crop Species On Soil Physical Properties In A Corn-Soybean Rotation, Addison D. Jacobs

Student Theses and Dissertations

As crop land decreases and population increases, soil quality is becoming a concern. Utilizing cover crops in cropping systems could improve soil quality. This study examined 16 treatments of single-species cover crops, cover crop mixes, and two control treatments on a silt-loam soil, in a corn (Zea mays L.) - soybean (Glycine max L. Merr.) crop rotation under no-tillage, to determine their effect on soil physical properties. Cover crop biomass differed (p<0.10) among treatments and produced a maximum of 15.6 Mg ha-1 of biomass in the crimson clover treatment. Water infiltration rates increased as much as 282% in the complete-mix treatment compared to the fallow control. Differences in infiltration rates due to cover crop species were shown in two-years. However, these results suggest that it may take more time for cover crops to affect change in bulk density and aggregate stability.

The Evaluation Of Two Different Harvesting 'Topbunch' And 'Hi-Crop' Collards (Brassica Oleracea (L)) Leaves From Plants Grown In A Wiregrass Tunnel House, Edward Sparks, Raymon Shange, Jacquelyn Jackson, Victor Khan, James E. Currington, Ramble Ankumah, Nathaniel Ellison, George X. Hunter Jr., Jeffery L. Moore

Professional Agricultural Workers Journal

A study was conducted to determine if a 100% or 50% harvest intensity of ‘Topbunch’ collards leaves could be a recommended practice for Tunnel House producers. The experiment was conducted as a split-plot design with harvest dates as main plots, and harvesting intensity of 100% or 50% of leaves as sub-plots. All treatments were replicated three times, drip irrigated, and fertilized according to soil test recommendations. The results showed significant interactions between harvest methods and dates for number and weight of leaves harvested. There were also significant differences for the weight of leaves harvested and numbers. The leaf recovery rates …

Quantifying Plant Soluble Protein And Digestible Carbohydrate Content, Using Corn (Zea Mays) As An Exemplar, Carrie A. Deans, Gregory A. Sword, Paul A. Lenhart, Eric Burkness, William D. Hutchison, Spencer T. Behmer

Entomology Faculty Publications

Elemental data are commonly used to infer plant quality as a resource to herbivores. However, the ubiquity of carbon in biomolecules, the presence of nitrogen-containing plant defensive compounds, and variation in species-specific correlations between nitrogen and plant protein content all limit the accuracy of these inferences. Additionally, research focused on plant and/or herbivore physiology require a level of accuracy that is not achieved using generalized correlations. The methods presented here offer researchers a clear and rapid protocol for directly measuring plant soluble proteins and digestible carbohydrates, the two plant macronutrients most closely tied to animal physiological performance. The protocols combine …

Managing Herbicide Resistance: Listening To The Perspectives Of Practitioners. Procedures For Conducting Listening Sessions And An Evaluation Of The Process, Jill Schroeder, Michael Barrett, David R. Shaw, Amy B. Asmus, Harold Coble, David Ervin, Raymond A. Jussaume Jr., Micheal D. K. Owen, Ian Burke, Cody F. Creech, A. Stanley Culpepper, William S. Curran, Darrin M. Dodds, Todd A. Gaines, Jeffrey L. Gunsolus, Bradley D. Hanson, Prashant Jha, Annie E. Klodd, Andrew R. Kniss, Ramon G. Leon, Sandra Mcdonald, Don W. Morishita, Brian J. Schutte, Christy L. Sprague, Phillip W. Stahlman, Larry E. Steckel, Mark J. Vangessel

Plant and Soil Sciences Faculty Publications

Seven half-day regional listening sessions were held between December 2016 and April 2017 with groups of diverse stakeholders on the issues and potential solutions for herbicide-resistance management. The objective of the listening sessions was to connect with stakeholders and hear their challenges and recommendations for addressing herbicide resistance. The coordinating team hired Strategic Conservation Solutions, LLC, to facilitate all the sessions. They and the coordinating team used in-person meetings, teleconferences, and email to communicate and coordinate the activities leading up to each regional listening session. The agenda was the same across all sessions and included small-group discussions followed by reporting …

Flow Regime Influences On Stream And Riparian Soil Carbon Dynamics In The Ozark Highlands And Boston Mountains Of Arkansas, Allyn Dodd

Graduate Theses and Dissertations

The natural flow regime exerts primacy over lotic ecosystem patterns and processes. However, little work has examined the influence of flow regime on instream and riparian carbon (C) dynamics in minimally-impacted, temperate forested systems. To date, most research efforts have focused on characterizing C movement and transformations across biomes and land use categories; however, flow regime represents an overlooked, finer level of detail that may drive differences in ecosystem function. My dissertation objective was to measure C fixation and movement within and across multiple environmental spheres (e.g. within stream channels, between stream surfaces and the atmosphere, and from riparian soils …

Improvement Of Soil Structure Through Organic Crop Management, Conservation Tillage And Grass-Clover Ley, Viviana Loaiza Puerta, Engil Isadora Pujol Pereira, Raphaël Wittwer, Marcel G. A. Van Der Heijden, Johan Six

School of Earth, Environmental, & Marine Sciences Faculty Publications

Highlights

• Organic crop management combined with reduced tillage improved soil structure.
• The ley period improved soil structure for conventional intensive tillage.
• The ley period increased total carbon in organic crop management at 0–6 cm soil depth.

Abstract

Conventional intensive tillage is a widespread soil management practice that controls weeds and promotes nutrient mineralization at the expense of a degraded soil structure and soil carbon (C) loss. Alternative soil management practices such as no tillage, reduced tillage and temporary leys, however, can minimize the negative effects of intensive tillage on soil structure. To improve understanding of these management practices on …

Testing An Improved Method For Estimating The Unsaturated Hydraulic Conductivity Of Moderately Dry Soils, Sara Gedo

UNLV Theses, Dissertations, Professional Papers, and Capstones

Prediction of water movement in the vadose zone requires knowledge of either the unsaturated hydraulic conductivity, K(θ), or the hydraulic diffusivity, D(θ), of the soil as a function of the moisture content. However, both K(θ) and D(θ) are difficult to obtain for moderately dry soils because the tests are time consuming and expensive. In order to address this issue, Globus and Gee (1995) developed a “heat pipe” method that allowed for the direct estimation of D(θ) and K(θ) for moderately dry soils on relatively short time scales. They proposed that exposing a sealed horizontal soil column to a steady thermal …

Plant And Microbial Responses To Repeated Cu(Oh)2 Nanopesticide Exposures Under Different Fertilization Levels In An Agro-Ecosystem, Marie Simonin, Benjamin P. Colman, Weiyi Tang, Jonathan D. Judy, Steven M. Anderson, Christina M. Bergemann, Jennifer D. Rocca, Jason M. Unrine, Nicolas Cassar, Emily S. Bernhardt

Plant and Soil Sciences Faculty Publications

The environmental fate and potential impacts of nanopesticides on agroecosystems under realistic agricultural conditions are poorly understood. As a result, the benefits and risks of these novel formulations compared to the conventional products are currently unclear. Here, we examined the effects of repeated realistic exposures of the Cu(OH)₂ nanopesticide, Kocide 3000, on simulated agricultural pastureland in an outdoor mesocosm experiment over 1 year. The Kocide applications were performed alongside three different mineral fertilization levels (Ambient, Low, and High) to assess the environmental impacts of this nanopesticide under low-input or conventional farming scenarios. The effects of Kocide over time were …

Genome-Wide Atlas Of Alternative Polyadenylation In The Forage Legume Red Clover, Manohar Chakrabarti, Randy D. Dinkins, Arthur G. Hunt

Plant and Soil Sciences Faculty Publications

Studies on prevalence and significance of alternative polyadenylation (APA) in plants have been so far limited mostly to the model plants. Here, a genome-wide analysis of APA was carried out in different tissue types in the non-model forage legume red clover (Trifolium pratense L). A profile of poly(A) sites in different tissue types was generated using so-called ‘poly(A)-tag sequencing’ (PATseq) approach. Our analysis revealed tissue-wise dynamics of usage of poly(A) sites located at different genomic locations. We also identified poly(A) sites and underlying genes displaying APA in different tissues. Functional categories enriched in groups of genes manifesting APA between …

Differential Responses Of Carbon-Degrading Enzyme Activities To Warming: Implications For Soil Respiration, Ji Chen, Yiqi Luo, Pablo García-Palacios, Junji Cao, Marina Dacal, Xuhui Zhou, Jianwei Li, Jianyang Xia, Shuli Niu, Huiyi Yang, Shelby Shelton, Wei Guo, Kees Jan Van Groenigen

Agricultural and Environmental Sciences Faculty Research

Extracellular enzymes catalyze rate-limiting steps in soil organic matter decomposition, and their activities (EEAs) play a key role in determining soil respiration (SR). Both EEAs and SR are highly sensitive to temperature, but their responses to climate warming remain poorly understood. Here, we present a meta-analysis on the response of soil cellulase and ligninase activities and SR to warming, synthesizing data from 56 studies. We found that warming significantly enhanced ligninase activity by 21.4% but had no effect on cellulase activity. Increases in ligninase activity were positively correlated with changes in SR, while no such relationship was found for cellulase. …

Using Geological Facies To Estimate Chromate Sorption To Soils, Victoria Smith, Daja Scurlock, Chauntilena Butler, Eddie Hollins, Kennedy Smith, Tim Spearman, Christina Fulghum, John Dickson, Daniel I. Kaplan, Miles Denham, Garriet Smith

Journal of the South Carolina Academy of Science

Quantifying the extent to which contaminant metals bind to subsurface soils is important for risk assessment, the tendency for a contaminant to migrate, and developing environmental remediation strategies. Unfortunately, subsurface soils vary widely in their composition, which in turn affect their tendency to bind metals. The hypothesis of this study was predicated on how a better understanding of geological facies would reduce uncertainty associated with predicting contaminant metal sorption. Facies are layers of sediment deposited in the subsurface due to similar depositional conditions, including energy of an overlying waterway. As such, facies are expected to have similar assemblages of minerals, …