Digital Commons Network^™

Relationships And Generic Delimitation Of Eurasian Genera Of The Subtribe Asterinae (Astereae, Asteraceae) Using Molecular Phylogeny Of Its, Elena Korolyuk, Alexey Makunin, Tatiana Matveeva

Turkish Journal of Botany

The subtribe Asterinae (Astereae, Asteraceae) includes highly variable, often polyploid species. Recent findings based on molecular methods led to revision of its volume. However, most of these studies lacked species from Eurasia, where a lot of previous taxonomic treatments of the subtribe exist. In this study we used molecular phylogenetics methods with internal transcribed spacer (ITS) as a marker to resolve evolutionary relations between representatives of the subtribe Asterinae from Siberia, Kazakhstan, and the European part of Russia. Our reconstruction revealed that a clade including all Asterinae species is paraphyletic. Inside this clade, there are species with unresolved basal positions, …

Nebline, January 2015

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Feature: Extension 2014 Highlights

Food & Health

Family Living

Farm & Acreage

Horticulture

Pests & Wildlife

4-H & Youth

Extension Calendar

and other extension news and events

The Taurine Biosynthetic Pathway Of Microalgae, Rahul Tevatia, James Allen, Deepak Rudrappa, Derrick White, Thomas E. Clemente, Heriberto Cerutti, Yaşar Demirel, Paul H. Blum

Center for Plant Science Innovation: Faculty Publications

Taurine (2-aminoethanesulfonic acid) is an amino acid–like compound widely distributed in animals and an essential nutrient in some species. Targeted metabolomics of marine and freshwater microalgae combined with medium supplementation identified biosynthetic pathway intermediates and necessary catalytic activities. Genomic analysis was then used to predict the first taurine biosynthetic pathway in these organisms. MRM-based electrospray ionization (ESI) LC–MS/MS analysis demonstrated that taurine is synthesized using a carbon backbone from L-serine combined with sulfur derived from sulfate. Metabolite analysis showed a nonuniform pattern in levels of pathway intermediates that were both species and supplement dependent. While increased culture salinity raised taurine …

Striking The Balance: Challenges And Perspectives For The Protected Areas Network In Northeastern European Russia, Svetlana V. Degteva, Vasily I. Ponomarev, Sasha W. Eisenman, Vyacheslav Dushenkov

Publications and Research

Increasing anthropogenic pressure on the largest remaining tracts of old-growth boreal forest in Europe necessitates additional conservation of ecosystems and biodiversity in northeastern European Russia. In a regional network comprising 8 % of the Nenets Autonomous District and 13.5 % of the Komi Republic, 248 areas have varying protected statuses as state nature reserves (zapovedniks), national parks, reserves/sanctuaries (zakazniks), or natural monuments. Due to increased natural resource extraction in this relatively pristine area, designation of additional protected areas is critical for the protection of key ecological sites. The history of ecological preservation in these regions is herein described, and recent …

Nitrogen Management Of Forages In Relation To Gaseous Emissions – New Approaches And Considerations, Shabtai Bittman, Derek Hunt

IGC Proceedings (1977-2023)

Forages have a high N demand, a long growing season, and an effective root system all contributing to effective nutrient capture. However forages are restrictive in methods available for mitigating gaseous losses both as NH₃ and as N₂O, due to both practical and cost considerations. Strategies are needed to address the challenges of both N efficiency and N losses. Agronomic techniques in long term experiments can enhance estimates of N loss pathways and N efficiency, and demonstrate the importance of integrated multinutrient approaches. The dual manure stream concept divides manure into a thin fraction suitable as an …

Impact Of Market Forces On Product Quality And Grassland Condition, David L. Michalk, Jianping Wu, Warwick B. Badgery, David R. Kemp

IGC Proceedings (1977-2023)

Meeting demands for livestock products which are predicted to more than double during the next 20 years, is central to the challenge of feeding the world sustainably. Smallholders will play a key role in achieving global security in animal protein. However, this requires a shift from subsistence to market-oriented farming where production efficiency not the number of livestock is the key focus with the aim of producing ‘more from less’. For grassland-based ruminant production, reducing stocking rate from current unsustainable levels under subsistence management is an essential first step to producing more production and profit from fewer animals. This is …

Stakeholders Integration For Sustainable Use Of Temperate Forage/Livestock Agriculture, Garry D. Lacefield, Don Ball

IGC Proceedings (1977-2023)

Forage/livestock production is complex, and best management options are often site-specific, but some concepts have broad application. The intent of this article is to provide an overview of research-based management approaches that the authors believe are necessary to ensure the sustainability of forage/livestock farms. This overview discussion is needed because livestock agriculture is changing, thus creating both challenges and opportunities for producers. In the last 30 years, beef numbers in the USA have declined by 20%, but production per cow has more than doubled, resulting in increased total production on less land with fewer animals. Similar statistics exist for the …

Socio-Cultural Factors Challenging Development Interventions In Cattle Production In The Remote Areas Of Vietnam, Duong-Nam Ha, Pham-Van Hung, Tran-The Cuong, Ninh-Xuan Trung, Tran-Van Long, Laurie Bonney, Peter A. Lane, Guillaume Duteurtre, Stephen Ives

IGC Proceedings (1977-2023)

The northwest highlands of Vietnam are characterized by high altitude, low infrastructure, and low population densities composed of a wide diversity of different ethnic groups. Their socio-cultural characteristics strongly influence their lifestyle and production systems, including agricultural activities. The majority of these people have suffered from slow economic development, with the highest poverty rate in the country. This is a real need for plausible interventions where behavioral changes of smallholders throughout local value chains would be a critical foundation. Our project implemented in this context of development in the Northwest highlands of Vietnam aims to understand the role of socio-cultural …

Changing Grassland Scenario In Developing Countries--Economical And Social Perspective, Abule Ebro

IGC Proceedings (1977-2023)

Grasslands are mainly used for livestock production in developing countries although they have been facing contradictory pressures, i.e., increased demand for natural resources and animal products to cope with rising human populations. On the other, there is a need to preserve the environment and ecosystem. This paper reviewed the causes of grassland changes, the economic and social perspective of changing grasslands with more emphasis on dry lands. Different indicators were used to assess the economic (livestock production, wildlife and tourism, crop production, ecosystem services) and social (traditional institutions, mobility, land tenure and grazing systems) perspectives of changing grassland. The major …

Conservation Of Grassland Plant Genetic Resources Through People Participation, D. R. Malaviya, Ajoy K. Roy, P. Kaushal

IGC Proceedings (1977-2023)

Agrobiodiversity provides the foundation of all food and feed production. Hence, need of the time is to collect, evaluate and utilize the biodiversity globally available. Indian sub-continent is one of the world’s mega centers of crop origins. India possesses 166 species of agri-horticultural crops and 324 species of wild relatives. India is reported to have five grass covers identified. There have been almost nil human interference in terms of selection pressure; hence, the biodiversity is well conserved in these grazing lands. There is need of a system approach to understanding biodiversity that moves significantly beyond taxonomy and species observations. In …

Breeding Strategies To Improve Fodder Legumes With Special Emphasis On Clover And Medics, Ajoy K. Roy, D. R. Malaviya, P. Kaushal

IGC Proceedings (1977-2023)

In India, Forage has a unique integration of agriculture and animal industry in diversified rich cultural environment. Greater part of rural economy in India relies much upon mixed farming system, a well-knit combination of crop production and livestock rearing. In India, grazing-based livestock husbandry plays an important role in the rural economy as around 50% of animals depend on grazing. Pasturelands over an area of 12 Mha constitute the main grazing resources that are available. Nearly 30 pastoral communities in hilly or arid/semi-arid regions in northern and western parts of India, depend on grazing-based livestock production. Nomadic pastoralism, a traditional …

Front Matter [23rd International Grassland Congress Proceedings], National Organizing Committee, International Grassland Congress

IGC Proceedings (1977-2023)

No abstract provided.

United In Diversity: Mechanosensitive Ion Channels In Plants, Eric S. Hamilton, Angela M. Schlegel, Elizabeth S. Haswell

Biology Faculty Research

Mechanosensitive (MS) ion channels are a common mechanism for perceiving and responding to mechanical force. This class of mechanoreceptors is capable of transducing membrane tension directly into ion flux. In plant systems, MSion channels have been proposed to play a wide array of roles, from the perception of touch and gravity to the osmotic homeostasis of intracellular organelles. Three families of plant MS ion channels have been identified: the MscS-like (MSL), Mid1-complementing activity (MCA), and two-pore potassium (TPK) families. Channels from these families vary widely in structure and function, localize to multiple cellular compartments, and conduct chloride, calcium, and/or potassium …

Occurrence Of Arbuscular Mycorrhizal Fungi And Fusarium In Tc Banana Rhizosphere Inoculated With Microbiological Products In Different Soils In Kenya, R. W. Mukhongo, M. A. Kavoo-Mwangi, M. E. Kahangi, E. M. Ateka, A. B. Were, J. R. Okalebo, M. E. Mutegi, K. E. Mwangi, T. T. Tepeni, K. S. Njuguini, J. M. Onguso, S. A. Okoth, J. M. Jefwa

All Peer-Reviewed Publications

The impact of microbiological commercial products (PHC Biopak, Rhizatech and ECO-T) on the occurrence of mycorrhizae and Fusarium in the rhizosphere of tissue culture banana (Gros Mitchel cv.) was assessed. Tissue cultured banana plantlets were inoculated with PHC Biopak (Bacillus), Rhizatech (mycorrhiza) and ECO-T (T. harzianum) under greenhouse conditions using a completely randomized design in a Vertisol, Rhodic Ferralsol and Humic Nitisol sampled from the major banana growing regions in Kenya. Potted plants were later established under field conditions in the three agro ecological zones. Roots and soils sampled at end of potting and at flowering were assessed for AM …

Latitudinal Gradient Facilitates Adaptive Population Differentiation Of Campanulastrum Americanum (American Bellflower), Marisa L. Naciuk

Theses and Dissertations

Local adaptation is characterized by higher reproductive fitness by individuals present in their native habitats relative to nonlocals. This study utilized Campanulastrum americanum as a model for assessing whether an environmental gradient can facilitate local adaptation. In particular, I determined if a latitudinal gradient across eastern United States has influenced the phenology and reproductive fitness of five northern and four southern C, americanum populations. These populations were reciprocally transplanted into two common garden sites positioned in the most northern and southern extent of the species distribution: Hastings, MI and Columbus, GA. I observed adaptive population differentiation of northern and southern …

Characterization Of Terrestrial Dissolved Organic Matter Fractionated By Ph And Polarity And Their Biological Effects On Plant Growth, Rachel L. Sleighter, Paolo Caricasole, Kristen M. Richards, Terry Hanson, Patrick G. Hatcher

Chemistry & Biochemistry Faculty Publications

Background: Humic substances are ubiquitous in the environment, complex mixtures, and known to be beneficial to plant growth. To better understand and identify components responsible for plant growth stimulation, a terrestrial aquatic DOM sample was fractionated according to pH and polarity, obtaining acid-soluble and acid-insoluble portions, as well as acid-soluble hydrophobic and hydrophilic fractions using C18. The various fractions were characterized then evaluated for their biological effects on plant growth using bioassays with corn at two carbon rates.

Results: Approximately 43% and 57% of the carbon, and 31% and 69% of the iron, was found in the acid-insoluble and acid-soluble …

Nitrogen Release And Disease Suppressive Activity Of Four Compost Amendments On Three Vegetable Farms, Lori Hoagland, Elizabeth Maynard, Dan Egel, Natasha Cerruti, Jeff Evard, Ben Nava, Steve Spencer

Midwest Vegetable Trial Reports

No abstract provided.

Bumpers College Students In Action, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Pack Factor Measurements For Corn In Grain Storage Bins, Rumela Bhadra, Aaron P. Turner, Mark E. Casada, Michael D. Montross, Sidney A. Thompson, Josephine M. Boac, Samuel G. Mcneill, Ronaldo G. Maghirang

Biosystems and Agricultural Engineering Faculty Publications

Shelled yellow corn is commonly stored in concrete or corrugated steel bins. Granular materials compact under their own weight, primarily due to particle rearrangement, leading to an increase in bulk density and a change in volume when stored. Reliable grain pack factors are needed to estimate storage capacities and to accurately monitor grain inventories. A science-based model (WPACKING) of pack factors is available that uses the differential form of Janssen's equation and takes into account the variation in density caused by pressure variation with height and moisture content of the grain and accounts for the effects of grain type, test …

European Frogbit (Hydrocharis Morsus-Ranae) In The Champlain/Adirondack Region: Recent Inferences, Chris Martine, Stephen Langdon, Timothy Shearman, Casey Binggeli, Timothy B. Mihuc

Faculty Journal Articles

As part of its north-south movement following introduction to Canada, Hydrocharis morsus-ranae L. (Hydrocharitaceae) has recently become established in slow-moving waters of the Champlain/Adirondack region of the northeastern US. The species is present on both the New York and Vermont shores of Lake Champlain and, so far, at a single location in the interior of the Adirondack Park. The southernmost Champlain/Adirondack occurrence is in the Champlain Canal south of Whitehall, NY (L. Eichler, Darrin Freshwater Institute, pers. comm.), within 25 miles of the Hudson River watershed—a population first recorded around 2006. Entry into the Hudson watershed, whether from the canal …

Development Of Aflp Markers Associated With Zucchini Yellow Mosaicvirus Resistance In Cucumber (Cucumis Sativus L.), Hasan Özgür Şiğva, Ahmet Fi̇kret Firat, Gülden Hazarhun, Ahmet İpek

Turkish Journal of Botany

Zucchini yellow mosaic virus (ZYMV) is one of the most important pathogens that cause significant yield losses in many cucurbit crops including cucumber (Cucumis sativus L). ZYMV resistance in cucumber is inherited by a single recessive gene. The purpose of this study was to identify molecular markers linked to the gene conferring ZYMV resistance in cucumber. We developed a population of 188 F2 plants derived from inbred cucumber lines. Individual F2 plants were self-pollinated to generate F3 populations. Ten randomly selected plants from each F3 population were tested for ZYMV resistance. We used a bulk segregant analysis method to identify …

Overexpression Of A Soybean Expansin Gene, Gmexp1, Improvesdrought Tolerance In Transgenic Tobacco, Thanh Son Lo, Hoang Duc Le, Vu Thanh Thanh Nguyen, Hoang Ha Chu, Van Son Le, Hoang Mau Chu

Turkish Journal of Botany

The EXP1 gene encodes expansin, which has the ability to loosen the plant cell wall. The soybean expansin gene GmEXP1 is activated specifically during the root elongation process, and thus it plays important roles in root development. During the drought period, changes in pressure within the cell and the fast development of the root allow plants to collect water from deep soil, which in turn helps plants grow and develop. In this study, we have successfully cloned and generated a GmEXP1 construct expressing recombinant expansin protein in tobacco plants. GmEXP1 is expressed in transgenic tobacco plants and passed on to …

Aquaporins As Targets For Stress Tolerance In Plants: Genomic Complexity And Perspectives, Wonkeun John Park, Benjamin Todd Campbell

Turkish Journal of Botany

As a multigene family, plant aquaporins function not only in water transport but also in transport of small elements that are important for vegetative and reproductive growth of plants. Increasing evidence exhibits the relevance of aquaporins to tolerance against abiotic and biotic stresses such as drought, nutrient deficiency, and herbivore attack. With the accumulation of crop genome sequencing, it is suggested that several aquaporin genes are conserved in subchromosomal locations as tandem duplicated members. In this review, we will discuss the compelling nature of aquaporins as multifunctional transport channels that are often encoded in clustered regions of genomes and relevant …

Application Of Data Analysis In Cold Stress: A Case Study Of Nicotiana Benthamiana, İbrahi̇m Koç, Zi̇hni̇ Onur Çalişkaner, Ertuğrul Fi̇li̇z

Turkish Journal of Botany

Cold stress is a major environmental factor in plant life cycles. Nicotiana benthamiana, which belongs to the family Solanaceae, is one of the most commonly used model species in plant-microbe interaction studies. In total, 5205 differentially expressed genes were identified under cold stress in N. Benthamiana. Of these, 5029 were upregulated and 176 were downregulated within four time periods (4 h, 12 h, 24 h, and 48 h). The common up- and downregulated genes were identified as 692 and 6, respectively. The functional annotations of these genes were studied and these common genes involved in protein, RNA, miscellaneous enzyme families, …

Systematic Placement Of The Turkish Endemic Genus Ekimia (Apiaceae) Based On Morphological And Molecular Data, Dmitry Lyskov, Galina Degtjareva, Tahir Samigullin, Michael Pimenov

Turkish Journal of Botany

The systematic position of the monotypic genus Ekimia H.Duman and M.F.Watson (Apiaceae), a narrow endemic to Turkey, was evaluated on the basis of morphological data and nrDNA ITS sequences. Ekimia bornmuelleri (Hub.-Mor. And Reese) H.Duman and M.F.Watson was initially described in Prangos Lindl. Due to the unique fruit morphology uncommon for this genus it was later shifted to an independent genus. In the Bayesian and most parsimonious trees, E. Bornmuelleri is sister to Laserpitium petrophilum Boiss. And Heldr and Laserpitium glaucum Post within the Daucinae clade. This result is consistent with its morphology: the presence of the primary and secondary …

Molecular Phylogeny And Biogeography Of The South American Genus Metrodorea (Rutaceae), Pedro Dias, Renata Giassi Udulutsch, Jose Rubens Pirani

Turkish Journal of Botany

The genus Metrodorea (Rutaceae), with 6 species, has representatives that vary from small shrubs to tall trees, and its leaf sheaths make it unique in the family; it is restricted to South America, with species diversity concentrated in Brazil. In this study, we applied Bayesian and parsimony methods to infer the molecular phylogeny of Metrodorea, and cladistic biogeographic methods to propose an area cladogram for the genus. All results supported Metrodorea as monophyletic, and the presence of leaf sheaths is reinforced as its key diagnostic feature. Bayesian and parsimony trees were identical for relationships within Metrodorea. The crown clade (M. …

Aristolochia Altanii (Aristolochiaceae), A New Species From Turkey, Ahmet İlçi̇m, Lütfi̇ Behçet, Aycan Tosunoğlu

Turkish Journal of Botany

Aristolochia altanii İlçim and Behçet sp. Nov. İs described from Turkey and illustrated. The specimens were collected from Kahramanmaraş in South Anatolia. The new species is closely related to A. Guichardii and A. Brevilabris. However, this species differs in some important characteristics, such as the length of the pedicel and the perianth, the indument of the perianth limb, and the micromorphology of the pollen and the seeds. The diagnostic characters are discussed and taxonomic comments are presented.

The Phytoplankton Functional Group Concept Provides A Reliable Basis For Ecological Status Estimation In The Çaygören Reservoir (Turkey), Kemal Çeli̇k, Tuğba Ongun Sevi̇ndi̇k

Turkish Journal of Botany

The phytoplankton functional group (FG) concept has been successfully used to determine water quality states in both lake and river systems, but is not yet stressed in regular studies in reservoir environments. The purpose of our study was to estimate the ecological status of the temperate Çaygören Reservoir (2007-2009) using the Q(r) FG composition metric, and to test whether it is able to follow the main structuring of the physical and chemical parameters studied. The main occurring coda were codon C (Cyclotella meneghiniana Kützing, Stephanodiscus neoastraea Hakansson and Hickel), codon T (Gloeotila subconstricta (G.S. West) Printz, Mougeotia sp.), codon X2 …

Notes On Astragalus Sect. Hymenostegis (Fabaceae) From Turkey, Seher Karaman Erkul, Ali Bagheri, Ali Asghar Maassoumi, Mohammad Reza Rahiminejad

Turkish Journal of Botany

Astragalus rubrostriatus Bunge and Astragalus qoturensis Podlech, belonging to Astragalus sect. Hymenostegis Bunge, are recorded here for the first time from Turkey. In addition, Astragalus chrysostachys Boiss. is excluded from the list of Turkish species of Astragalus.

Paracaryum Bingoelianum (Boraginaceae), A New Species From Turkey, Lütfi̇ Behçet, Ahmet İlçi̇m

Turkish Journal of Botany

Paracaryum bingoelianum Behçet & İlçim is described as a new species. It is confined to Bingöl in Eastern Anatolia, Turkey. Paracaryum bingoelianum is closely similar to P. cristatum subsp. cristatum and P. kurdistanicum. It mainly differs from them in that it has a shrub-like woody base and numerous stems with sterile shoots, longer corolla, and bigger nutlets. The diagnostic characters are discussed and taxonomic comments are presented. Seed and pollen characteristics were investigated using light and scanning electron microscopy. Notes on its ecology are also presented. A distribution map of the new and related species is provided.