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Biology: Weird Science?, Ao Liu, Elizabeth Stephenson, Audrey Hendrickson

Collin College Undergraduate Interdisciplinary Student Research Conference

Papers Presented:

"The Relationship of the Second Light Treatment to Cell Germination and Polarization in Ceratopteris Fern Spores" by Ao Liu

Abstract: This research about the Ceratopteris richardii fern spores, which is part of the Discovery Lab in Plant Biology course at UT Austin led by Dr. Stan Roux. We focused on the relationship between the second light treatment and germination as well as polarization of the spores. Several groups of students tested different amounts of light and darkness on the influence of germination rate and the gravity response of the germinated spores.

"A Mathematical Model of Skeletal Muscle Regeneration" …

Respons Pertumbuhan Tanaman Aren (Arenga Pinnata Merr.) Dengan Pemberian Pupuk Organik Dan Pupuk Anorganik Berbeda Dosis, Mira Ariyanti, Mochamad Arief Soleh, Yudithia Maxiselly

Jurnal Kultivasi

Tanaman aren (Arenga pinnata Merr.) adalah salah satu tanaman perkebunan yang bernilai ekonomis tinggi dan potensial untuk terus dikembangkan. Salah satu upaya untuk meningkatkan produktivitas aren di Indonesia adalah dengan pemupukan. Pupuk anorganik yang lazim diaplikasikan pada tanaman aren memiliki kecenderungan untuk merusak kualitas tanah. Oleh karena itu, perlu dilakukan usaha untuk untuk mengembalikan kesehatan tanah dengan cara mengimbangi pemberian pupuk anorganik dengan pupuk organik. Penelitian ini dilakukan di kebun percobaan Ciparanje, Fakultas Pertanian Universitas Padjadjaran, Kecamatan Jatinangor Kabupaten Sumedang, Jawa Barat pada Oktober 2016 - Desember 2016. Penelitian menggunakan rancangan acak kelompok terdiri dari enam kombinasi perlakuan dan diulang …

Variabilitas Genetik, Kemajuan Genetik, Dan Pola Klaster Populasi Tegakan Benih Paraserianthes Falcataria (L.) Nielsen Setelah Seleksi Massa Berdasarkan Marka Morfologi, Sopandie Sunarya, Murdaningsih Haeruman Karmana, Neni Rostini, Sumadi

Jurnal Kultivasi

Informasi variabilitas genetik, kemajuan genetik dan pola kluster fennotipik merupakan dasar pada penelitian pemuliaan pohon yang akan meningkatkan peluang diperolehnya pohon superior. Tujuan penelitian adalah mendapatkan beberapa parameter genetic dan pola kluster dari populasi tegakan benih Paraserianthes falcataria (L.) Nielsen menggunakan seleksi massa berdasarkan marker morfologi. Percobaan disusun menggunakan Rancangan Acak Kelompok (RBD) dengan lima perlakuan yang diulang empat kali. Materi percobaan adalah individu pohon pada tegakan benih P. falcataria. Pengamatan dilakukan terhadap karakter diameter setinggi dada (DBH), tinggi total (Ttot), tinggi bebas cabang (Tbc), kekekaran pohon (KPhn), tinggi tajuk (Ttjk), jumlah cabang (JCbg) dan volume pohon (VPhn). Variabilitas genetik …

Dark-Adapted Fluorescence And Stomatal Conductance After Dcmu (3-(3,4-Dichlorophenyl)-1, 1-Dimethylurea)) Exposure On Malva Parviflora Plants, Piueti Maka, Mia Bryant, Isabelle Sarwono

Featured Research

The purpose of this experiment was to determine the disturbance effect of indirect exposure to DCMU (3-[3,4-dichlorophenyl]-1,1-dimethylurea), a popular herbicide, on dark adapted fluorescence and stomatal conductance in Malva parviflora plants. We utilized a test site exposed to sunlight and free from other external interference. Two main apparatuses were used to collect data; stomatal conductance was measured by a leaf porometer, and dark-adapted fluorescence (Fv/Fm) was measured using a Pulse Modulated Fluorometer. Our data yielded significant comparison results for dark-adapted fluorescence (P0.05). Additionally, observations six days after disturbance showed a drastic presence of hollyhock rust (Puccinia malvacearum) and …

Photoprotection Adaptiveness In Native (Lupinus 
Succulentus) And Invasive (Malva Parviflora) Heliotropic Plants, Joseph Davidson, Cameron Juarez, Collin Scott

Featured Research

Addressed here is the question of whether invasive heliotropic plants can adapt better than native heliotropic plants, to conditions in which their solar tracking capabilities are hindered. In order to test this, a heliotropic species native to Southern California (Lupinus succulentus) was compared to a weedy heliotropic species invasive to Southern California (Malva parviflora). We hypothesized that the photoprotection mechanisms of M. parviflora would adapt better to being restrained as it is an invasive species and it was more abundant in the area. Values of Fv’/Fm’ and qN were measured in order to compare the efficacy …

Reflectance, Transmittance, And Absorbance Values In Salvia Apiana
 Result In Better Performance Than Salvia Mellifera In Drought- Like Conditions, Haley Bekins, Caroline Boone, Kristen Hardin

Featured Research

Salvia apiana, due to the physically lighter color and thickness of the leaves, will have higher reflectance values, lower transmittance values, and lower absorbance values than Salvia mellifera. These measurements exemplify characteristics of a better adapted species for droughts, and then the absorption values can be used to calculate more information on the species like ERT. We measured transmittance and reflectance of six leaves from randomly selected plants of both species through the use of an integrating sphere. After obtaining the R and T value of each plant, we calculated the leaf absorbance,α. This was done by using the …

A Comparative Study Of Adults Vs. Resprouts’ Stomatal Conductance And Xylem Water Potential In Malosma Laurina, Lauren Dam, Brinna Lee, Sarah Dahlberg, Stephen Davis

Featured Research

The purpose of this study is to compare the stomatal conductance and xylem water potential between adults and resprouts of Malosma laurina growing at the Drescher Campus at Pepperdine University. Our data suggest that stomatal conductance and xylem water potential of adult and resprout M. laurina are not significantly different (p = 0.09312, p = 0.7064 respectively), implying that M. laurina at that study site has had sufficient time to recover from the drought due to the increased levels of rainfall.

A Comparison Of Photoprotection In C3 Plants Between A Native And An Invasive Species, T. Cao, M. Field, K. Godon

Featured Research

Now more so than ever with the increasing demands placed upon plant species as a direct result of climate change, competition between native and invasive species determines which species are able to survive and reproduce. Biologically the two species, native and invasive, carry out the same functions yet it is in how they carry out said functions that they differ. Prior to the commencement of the study the belief was held that the invasive species (here Avena) would contain increased photoprotection than the native species (here Elymus) for it to possess a competitive advantage. Testing of the stated hypothesis including …

Comparative Fitness Of Transplanted Nassella Pulchra: A Study Of Native And Invasive Grasses, Grace Palmer, Yash Pandey, Isabelle Panos

Featured Research

Previous study of the fitness of California, perennial N. pulchra was conducted at the transplant garden on the Drescher campus of Pepperdine University in the spring of 2016. A follow up study was conducted to understand how the recent increase in rainfall has affected the comparative health of N. pulchra in the transplant garden and in the wild, as well as the health of the invasive, annual grass A. fatua. The height, water potential, photoprotection, and stomatal conductance were measured in transplant N. pulchra, wild N. pulchra, and the competing A. fatua. It was hypothesized that A. fatua …

Solar Tracking Fitness In Native Lupulinus Succulentus Vs. Non-Native Malva Sylvestris, Kathryn Maidlow, Logan Scott

Featured Research

For this experiment, we hypothesized, that while both native and non-native species use solar tracking, the native species Lupulinus succulentus (bluebonnet) will solar track to increase light levels with low leaf temperatures; however, the non-native species Malva sylvestris (cheeseweed) will solar track to increase light levels with an elevated leaf temperature over the native species. Solar tracking was also hypothesized as a significant benefit to each plant species, thus we assumed that if a leaf was prevented from solar tracking that we would see a difference between the solar trackers and non-solar trackers of each species. We decided to use …

Respons Tanaman Jagung (Zea Mays L.) Akibat Pemberian Pupuk Fosfat Dan Waktu Aplikasi Pupuk Hayati Mikroba Pelarut Fosfat Pada Ultisols Jatinangor, Agus Wahyudin, Betty Natalie Fitriatin, Fiky Yulianto Wicaksono, Ruminta, A. Rahadiyan

Jurnal Kultivasi

Jagung merupakan salah satu komoditas tanaman pangan yang mempunyai peranan strategis dalam pembangunan pertanian dan perekonomian Indonesia karena memiliki potensi dalam kebutuhan pangan, pakan, bahan baku industri, dan kerajinan tangan. Penelitian ini bertujuan untuk mengetahui pengaruh jenis pupuk fosfat dan waktu pengaplikasian pupuk hayati mikroba pelarut fosfat (MPF) terhadap pertumbuhan dan hasil tanaman jagung pada Ultisols Jatinangor. Percobaan dilaksanakan di Kebun Percobaan Ciparanje Fakultas Pertanian Universitas Padjadjaran, Jatinangor, Kabupaten Sumedang, Jawa Barat dengan ketinggian tempat +_ 750 meter di atas permukaan laut dan ordo tanah Ultisol, curah hujan rata-rata termasuk tipe C3 menurut Oldeman, dan temperatur udara berkisar antara 22,00 …

Pengaruh Jarak Tanam Berbeda Dan Berbagai Dosis Pupuk Kandang Ayam Terhadap Pertumbuhan Dan Hasil Tanaman Hanjeli Pulut (Coix Lacryma-Jobi L.) Di Dataran Tinggi Punclut, Aep Wawan Irwan, Tati Nurmala, Tia Dian Nira

Jurnal Kultivasi

Penelitian ini bertujuan untuk melihat bagaimana pengaruh jarak tanam yang berbeda dan berbagai dosis pupuk kandang ayam serta memperoleh salah satu kombinasi jarak tanam dengan dosis pupuk kandang ayam yang memberikan pengaruh terbaik pada pertumbuhan dan hasil hanjeli pulut. Percobaan dilaksanakan dari bulan Desember 2015 sampai bulan Mei 2016 di Punclut, Lembang, Kabupaten Bandung dengan ketinggian tempat mencapai 1095 m di atas permukaan laut, dengan tanah Latosol dan tipe iklim C2 menurut klasifikasi Oldeman. Rancangan yang digunakan dalam penelitian ini adalah Rancangan Acak Kelompok (RAK) yang terdiri dari 9 perlakuan dan diulang sebanyak 3 kali, dengan perlakuan kombinasi jarak tanam …

Overestimasi Penggukuran Gas Exchange Tanaman Dengan Menggunakan Photosynthesis Analyzer Li-6400, Mochamad Arief Soleh

Jurnal Kultivasi

Salah satu tujuan penelitian adalah dihasilkannya data penelitian yang valid dan terpercaya. Semuanya itu tentu memerlukan usaha keras dalam memahami topik penelitian, serta memahami cara kerja alat penelitian yang akan digunakan. Beberapa kesalahan yang penulis temui dalam mengukur laju fotosintesis tanaman atau gas exchange dengan alat LI-6400 adalah ditemukannya overestimasi pengukuran. Seperti ditemukan pada dua publikasi jurnal, misalnya laju fotosintesis tanaman bawang merah mencapai 97-158 μmol CO2 m-2 s-1 dan laju fotosintesis jangung mencapai 85 – 100 μmol CO2 m-2 s-1. Secara umum tanaman C4 (Jagung) memiliki laju fotosintesis jauh lebih tinggi dibanding tanaman C3 (Bawang). Ada dua faktor kemungkinan …

Oxidation Of Substituted Catechols At The Air-Water Interface: Production Of Carboxylic Acids, Quinones, And Polyphenols, Elizabeth A. Pillar, Marcelo I. Guzman

Chemistry Faculty Publications

Anthropogenic activities contribute benzene, toluene, and anisole to the environment, which in the atmosphere are converted into the respective phenols, cresols, and methoxyphenols by fast gas-phase reaction with hydroxyl radicals (HO(•)). Further processing of the latter species by HO(•) decreases their vapor pressure as a second hydroxyl group is incorporated to accelerate their oxidative aging at interfaces and in aqueous particles. This work shows how catechol, pyrogallol, 3-methylcatechol, 4-methylcatechol, and 3-methoxycatechol (all proxies for oxygenated aromatics derived from benzene, toluene, and anisole) react at the air-water interface with increasing O3(g) during τc ≈ 1 μs contact time and contrasts their …

Link Between Local Phenology And Climate Change, Blake Steiner, Tatyana Lobova

Virginias Collegiate Honors Council Conference

The SouthEast Virginia Phenology Project was initiated as collaboration between Norfolk Botanical Garden and Old Dominion University in 2010 to document phenology of seven native plants and potential effects of the climate change on their life cycle. The air temperature in Norfolk has increased on average by 0.02ºC per year since 1980. Four out of seven of taxonomically diverse plant species (Mayapple, Flowering Dogwood, Highbush Blueberry, and Common ButtonBush) exhibited significant sensitivity to warming temperatures. Of these four, only Common Buttonbush (Cephalanthus occidentalis) had shown significant phenophases shift. Specifically, first flowering and first fruiting dates had shifted 2.7 …

Testing Effectiveness Of Aqueous Phases From Struvite And Hydroxyapatite Mineral Precipitation As Algal Nutrient Sources, Aaron Lyons

Virginias Collegiate Honors Council Conference

As interest in algal biofuel grows, the need to explore diverse nutrient sources for growing algae becomes apparent. Struvite and Hydroxyapatite (HAP) were precipitated after flash hydrolysis. The leftover aqueous phase (AP) could serve as nutrients source for algae cultivation and the potential reuse of this waste stream is promising. To test this, 12 bottles of Scenedemus sp., four of Struvite, four of HAP, and four control AM-14 synthetic media were cultivated. 10% of the Phosphorus in the synthetic media was replaced with phosphorous from the struvite AP, and 10% of the nitrogen in the synthetic media was replaced …

Comparison Of Physiological Measurements And Water Potential Of Malosma Laurina During And After The Drought In Southern California, Nicolette Jessen, Kirstin Van Fleet, Rachel White

Featured Research

After 5 years of drought, southern California has recently experienced increases in precipitation. Malosma laurina is a chaparral shrub that displays vulnerability to fungal infection during severe drought conditions, particularly in its adult branches, resulting in severe dieback throughout the Santa Monica Mountains. M. laurina is known to produce resprout leaves during times of environmental stress that are less affected by the fungus based on its ability to maintain water status and thus are more capable of displaying resilience in more favorable environmental conditions. We hypothesize that the increase in rain will not be enough to alter the vitality of …

Predicting Trait-Environment Relationships For Venation Networks Elong An Andes-Amazon Elevation Gradient, Benjamin Blonder, Norma Salinas, Lisa Patrick Bentley, Alexander Shenkin, Percy O. Chambi Porroa, Yolvi Valdez Tejeira, Cyrille Violle, Nikolaos M. Fyllas, Gregory R. Goldsmith, Roberta E. Martin, Gregory P. Asner, Sandra Diaz, Brian J. Enquist, Yadvinder Malhi

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Understanding functional trait-environment relationships (TERs) may improve predictions of community assembly. However, many empirical TERs have been weak or lacking conceptual foundation. TERs based on leaf venation networks may better link individuals and communities via hydraulic constraints. We report measurements of vein density, vein radius, and leaf thickness for more than 100 dominant species occurring in ten forest communities spanning a 3,300 m Andes-Amazon elevation gradient in Peru. We use these data to measure the strength of TERs at community scale and to determine whether observed TERs are similar to those predicted by physiological theory. We found strong support for …

Ultramafic Geoecology Of South And Southeast Asia, M.L. Galey, A. Van Der Ent, M.C.M. Iqbal, N. Rajakaruna

Biological Sciences

Globally, ultramafic outcrops are renowned for hosting foras with high levels of endemism, including plants with specialised adaptations such as nickel or manganese hyperaccumulation. Soils derived from ultramafic regoliths are generally nutrient-deficient, have major cation imbalances, and have concomitant high concentrations of potentially phytotoxic trace elements, especially nickel. The South and Southeast Asian region has the largest surface occurrences of ultramafic regoliths in the world, but the geoecology of these outcrops is still poorly studied despite severe conservation threats. Due to the paucity of systematic plant collections in many areas and the lack of georeferenced herbarium records and databased information, …

Ultramafic Geoecology Of South And Southeast Asia, Nishanta Rajakaruna, M. Galey, Van Der Ent, M. Iqbal

Faculty Publications, Biological Sciences

Globally, ultramafic outcrops are renowned for hosting floras with high levels of endemism, including plants with specialised adaptations such as nickel or manganese hyperaccumulation. Soils derived from ultramafic regoliths are generally nutrient-deficient, have major cation imbalances, and have concomitant high concentrations of potentially phytotoxic trace elements, especially nickel. The South and Southeast Asian region has the largest surface occurrences of ultramafic regoliths in the world, but the geoecology of these outcrops is still poorly studied despite severe conservation threats. Due to the paucity of systematic plant collections in many areas and the lack of georeferenced herbarium records and databased information, …

Sterol Binding By The Tombusviral Replication Proteins Is Essential For Replication In Yeast And Plants, Kai Xu, Peter D. Nagy

Plant Pathology Faculty Publications

Membranous structures derived from various organelles are important for replication of plus-stranded RNA viruses. Although the important roles of co-opted host proteins in RNA virus replication have been appreciated for a decade, the equally important functions of cellular lipids in virus replication have been gaining full attention only recently. Previous work with Tomato bushy stunt tombusvirus (TBSV) in model host yeast has revealed essential roles for phosphatidylethanolamine and sterols in viral replication. To further our understanding of the role of sterols in tombusvirus replication, in this work we showed that the TBSV p33 and p92 replication proteins could bind to …

Dna Barcoding Reveals A New Morphotype Of The Sugar Kelp, Saccharina Latissima, Dallin Brimley, Zakery Ford, Travis Gould, Brandon Guerra, Emily Haggett, Ian Jones, Elyse Johnson, Ken Peterson, Matthew Prout

Thinking Matters Symposium Archive

Phytoplankton blooms follow predictable annual cycles in the Gulf of Maine, characterized by a large spring bloom and a smaller bloom in the fall. Marine phytoplankton form the foundation of primary production in Gulf of Maine waters, and thus community changes in composition, and abundance could have cascading effects on our coastal ecosystems.

We set out to monitor the community composition, diversity, and abundance of the spring micro-phytoplankton bloom, at a Friends of Casco Bay water quality monitoring site, in South Portland, Maine. The Gulf of Maine is experiencing accelerated warming rates, and this type of monitoring can aid in …

Accelerated Increase In The Arctic Tropospheric Warming Events Surpassing Stratospheric Warming Events During Winter, Shih-Yu (Simon) Wang, Yen-Heng Lin, Ming-Ying Lee, Jin-Ho Yoon, Jonathan D.D. Meyer, Philip J. Rasch

Plants, Soils, and Climate Faculty Publications

In January 2016, a robust reversal of the Arctic Oscillation (AO) took place associated with a rapid tropospheric warming in the Arctic region; this was followed by the occurrence of a classic sudden stratospheric warming in March-April. The succession of these two distinct Arctic warming events provides a stimulating opportunity to examine their characteristics in terms of similarities and differences. Historical cases of these two types of Arctic warming were identified and validated based upon tropical linkages with the Madden-Julian Oscillation and El Niño as well as those documented in previous studies. Our results indicate a recent and accelerated increase …

Utilization And Accessibility Of Securinega Virosa For Medical Use In Morogoro Municipality, Sasha Friedrich

Independent Study Project (ISP) Collection

Approximately 80% of rural communities in Tanzania utilize the services of traditional healers. This is largely because modern medicine is often expensive, inaccessible, or has undesirable side effects. This study investigates use of traditional medicine in Morogoro Urban district where people do have access to hospitals. In particular, this study aims to assess the utilization and accessibility the plant species Securinega virosa for medicinal use by identifying and interviewing the actors involved in the supply chain from harvester to consumer. I conducted semi-structured interviews with eight traditional healers and one herbal medicine shopkeeper. I expected harvesters to express a decline …

Nebline, April 2017

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Feature: Emerald Ash Borer — Next Steps

Food & Health

Farm & Acreage

Pests & Wildlife

Horticulture

Early Childhood

4-H & Youth

and other extension news and events

Special Pullout Section: Weed Awareness

Black Bugbane & The Blues: Interactions Between Our Wildflower Of The Year And The Insect World, W. John Hayden

Biology Faculty Publications

No, this article has nothing to do with American Roots music. Black Bugbane is one of several common names for the 2017 VNPS Wildflower of the Year, Actaea racemosa. And Blues refers to a subfamily of lycaenid butterflies, commonly referred to as Blues or Azures. The interactions between Black Bugbane, a.k.a., Black Cohosh, Appalachian Azure butterflies (Celastrina neglectamajor), and ants was recently summarized by VNPS charter member and past president Nicky Staunton (2015). In brief, Black Bugbane is the sole food source for caterpillars of Appalachian Azure butterflies, a situation that, superficially, might seem like any other caterpillar and host …

Abiotic Conditions Of Rare Pitcher's Thistle Attract Selection By An Invasive Weevil, Monica Paniagua Montoya

Lawrence University Honors Projects

Plant associations occur when host selection of a focal plant is reduced or increased by the presence of another plant species. Larinus planus is an invasive weevil whose larvae feed in the flower heads of native and federally threatened Pitcher’s thistle (Cirsium pitcheri). Studies have linked the presence of neighboring plants to increased host selection of Pitcher’s thistle by the weevil, but the factors contributing to host selection remain unknown. In our study, we determined if there were differences among abiotic factors, host selection and weevil behavior at Pitcher’s thistles surrounded by beach grass, sand and at high …

Impact Of Fertilizer, Corn Residue, And Cover Crops On Mycorrhizal Inoculum Potential And Arbuscular Mycorrhizal Fungi Associations, Rachel Brockamp

Undergraduate Research Symposium 2017

Arbuscular Mycorrhizal Fungi (AMF) can associate with roots of most land plants, helping to take up water and nutrients. Intensive agricultural practices like fallow treatments and adding inorganic nutrients reduce soil AMF. The purpose of my research was to examine whether three factors influenced AMF-crop associations: 1) fertilizer type and application rate 2) inclusion of cover crops that do or do not associate with AMF, and 3) impacts of corn residue. Soil Mycorrhizal Inoculum Potential (MIP) was measured to test treatment differences. MIP is the ability for soil AMF to infect roots. Roots grown in soil from the different treatments …

High Throughput In Vivo Analysis Of Plant Leaf Chemical Properties Using Hyperspectral Imaging, Piyush Pandey, Yufeng Ge, Vincent Stoerger, James C. Schnable

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

The possibility of predicting plant leaf chemical properties using hyperspectral images was studied. Sixty maize and 60 soybean plants were used, and two experiments were conducted: one with water limitation and the second with nutrient limitation, with the purpose of creating wide ranges of these chemical properties in plant leaf tissues. A hyperspectral imaging system with a spectral range from 550 to 1700 nm was used to acquire plant images in a high throughput fashion (plants placed on an automated conveyor belt). Leaf chemical properties were measured in the laboratory. Partial least squares regression was implemented on spectral data to …

Ecological And Genetic Variation Among Populations Of Boechera Caeruleamontana Sp. Nov. (Brassicaceae) From Blue Mountain And Dinosaur National Monumentin Eastern Utah And Western Colorado, Melissa Snyder

Theses and Dissertations

Boechera is a large genus of flowering plants whose taxa are found primarily in North America. Boechera vivariensis (S.L. Welsh) W.A. Weber (the Park rockcress) is restricted to the Uintah Basin on Weber sandstone substrates in the vicinity of Dinosaur National Monument and Blue Mountain. The nomenclature of Park rockcress is significantly impacted by the discovery that the type collections of the taxon represent a rare, apomictic diploid resulting from the hybridization between B. thompsonii and an undescribed sexual diploid (to be called Boechera caeruleamontana sp. nov. Allphin and Windham). As a result, greater information is needed regarding how B. …