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Growing South Dakota (Winter 2018), College Of Agriculture &. Biological Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

[Page] 2 Learn About Our Leaders
[Page] 4 Academic Programs at a Glace
[Page] 6 New Precision Ag Major Takes Off
[Page] 9 Raven Gives $5 Million Gift
[Page] 10 New Plant Science Research Facility
[Page] 13 Technical Training to Four-Year Degree
[Page] 15 Ag-Bio Career Fair Hits Record
[Page] 16 Breaking Ground : SD ADRDL
[Page] 19 Distinguished Professor Eric Nelson
[Page] 20 SDSU’s Veterinary Students
[Page] 24 Conservation Planning and Park Management
[Page] 25 Natural Resource Law Enforcement
[Page] 26 Medical Stethoscope Ceremony
[Page] 29 Master’s Degree in Human Biology
[Page] 30 Scott Pedersen Prepares Students
[Page] 32 …

Physiological Evaluation Of Cantaloupe Fruit Using Near-Infrared Spectroscopy, Theerawat Ruenkam

Chulalongkorn University Theses and Dissertations (Chula ETD)

Cantaloupe (Cucumis melo L.) is an important fruit for the economy of Thailand. The major problem is the non-uniformity of fruit quality. The objective of this research was to study the feasibility of using near infrared spectroscopy (NIRS) for the non-destructive evaluation of cantaloupe quality. Total of 130 ‘Sunlady’ cantaloupe samples were collected for NIR spectral data by 4 different instruments including FT-NIR (MPA) (800-2500 nm), FQA-NIRGUN (700-1100 nm), NIR spectrometer (model 1, 800-1200 nm) and NIR spectrometer (model 2, 650-1100 nm) and analyzed for quality values such as total soluble solids, firmness, total antioxidant capacity, ascorbic acid and glutathione …

Remobilization Of Heavy Metals By Mangrove Leaves, Hanan Almahasheer, Oscar Serrano, Carlos M. Duarte, Xabier Irigoien

Research outputs 2014 to 2021

Several studies have been carried out on heavy metal pollution in mangrove ecosystems. However, the role of mangroves in heavy metal remobilization is still relatively unknown. On one side, mangrove woody organs and soils sequester heavy metals for long time periods, but on the other hand, senescence of mangrove leaves may return these metals collected by roots to the upper layers of the soil. Here, we analyzed the concentration of chemical elements (Al, As, Cd, Cr, Cu, Fe, Mn, Mo, Ni, Pb, Sr, V, and Zn) as a function of age in mangrove leaves to understand heavy metals retention by …

The Effects Of Nutrient Resorption, Photosynthetic Rate, And Leaf Longevity On The Success Of Typha × Glauca, Clarissa Marie Ruiz

Dissertations and Theses @ UNI

The hybrid cattail Typha × glauca is invasive in the Midwestern United States, and outcompetes wetland natives and its parent species, Typha angustifolia and Typha latifolia under high nutrient conditions. Typha × glauca’s large size and copious litter production are the main factors known to contribute to its success, although research is lacking on physiological processes that contribute to its nitrogen use efficiency.

Nitrogen resorption was investigated as a mechanism of dominance in Typha × glauca. Due to nitrogen resorption being a nutrient conservation strategy, nitrogen resorption should be high in areas of low nitrogen availability. Since nitrogen …

Environmental Risk, Resource And Production, Nancye Gannaway

Farm Systems and Economics published reports

Plan Prepare Prosper - workshop

Aims

• To identify and plan for projected changes in weather patterns and in the physical resources that underpin the productivity of the farm enterprise.
• To develop initiatives to manage observed and likely threats from the environment to farm enterprises.
• To support the achievement of long-term economic viability of land under production

Today's content will help develop risk management strategies for agricultural production systems.

Application Of Crispr/Cas9 Genome Editing Technology For The Improvement Of Crops Cultivated In Tropical Climates: Recent Progress, Prospects, And Challenges, Effi Haque, Hiroaki Taniguchi, Md. Mahmudul Hassan, Pankaj Bhowmik, M. Rezaul Karim, Magdalena Śmiech, Kaijun Zhao, Mahfuzur Rahman, Tofazzal Islam

Faculty & Staff Scholarship

The world population is expected to increase from 7.3 to 9.7 billion by 2050. Pest outbreak and increased abiotic stresses due to climate change pose a high risk to tropical crop production. Although conventional breeding techniques have significantly increased crop production and yield, new approaches are required to further improve crop production in order to meet the global growing demand for food. The Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/Cas9 (CRISPR-associated protein9) genome editing technology has shown great promise for quickly addressing emerging challenges in agriculture. It can be used to precisely modify genome sequence of any organism including plants …

Organic Versus Conventional Cropping Sustainability: A Comparative System Analysis, Tiffany L. Fess, Vagner Benedito

Faculty & Staff Scholarship

We are at a pivotal time in human history, as the agricultural sector undergoes consolidation coupled with increasing energy costs in the context of declining resource availability. Although organic systems are often thought of as more sustainable than conventional operations, the lack of concise and widely accepted means to measure sustainability makes coming to an agreement on this issue quite challenging. However, an accurate assessment of sustainability can be reached by dissecting the scientific underpinnings of opposing production practices and crop output between cropping systems. The purpose of this review is to provide an in-depth and comprehensive evaluation of modern …

Plant Probiotic Bacteria Bacillus And Paraburkholderia Improve Growth, Yield And Content Of Antioxidants In Strawberry Fruit, Mosaddiqur Rahman, Abdullah As Sabir, Julakha Akter Mukrta, Mohibul Alam Khan, Mohammed Mohi-Ud-Din, Giashuddin Miah, Mahfuzur Rahman, M. Tofazzal Islam

Faculty & Staff Scholarship

Strawberry is an excellent source of natural antioxidants with high capacity of scavenging free radicals.

This study evaluated the effects of two plant probiotic bacteria, Bacillus amylolequefaciens BChi1 and Paraburkholderia fungorum BRRh-4 on growth, fruit yield and antioxidant contents in strawberry fruits. Root dipping of seedlings (plug plants) followed by spray applications of both probiotic bacteria in the field on foliage significantly increased fruit yield (up to 48%) over non-treated control. Enhanced fruit yield likely to be linked with higher root and shoot growth, individual and total fruit weight/plant and production of phytohormone by the probiotic bacteria applied on plants. …

Morphological, Genetic And Biochemical Characterization Of The Anti-Malarial Herb, Artemisia Annua Germplasm Collection At West Virginia University, Delini K. Samarasinghe

Graduate Theses, Dissertations, and Problem Reports (ETD)

Malaria is one of the deadliest diseases in human history. Nearly half of the world’s population, is at the risk in 106 countries. Only in 2016, this disease killed about 445,000 people, 72% of them being children under age five. It also accounts for US $12 billion dollars of direct costs in Africa alone. Five different species of Plasmodium cause malaria but P. falciparum is the most detrimental one, causing 50% of all malaria cases and is considered as the deadliest parasite in humans. Artemisinin (ART), a 15 C sesquiterpenoid is currently the only precursor to the most effective anti-malarial …

Exploring Technological Strategies For Valorization Of Solid Sisal Waste: A Research Review, Amelia Kivaisi, Anthony Mshandete

Tanzania Journal of Science

The sisal industry in Tanzania generates large amounts of waste which is an un-tapped bioresource. Research was undertaken to establish appropriate technologies  for its valorisation to mushrooms, biogas and biogas manure (BGM).Physical and biological pre-treatments achieved methane yield increments of 23-30% whereas co-digestion with fish waste achieved methane yield increments of 59-94%. Sisal fibre waste was demonstrated to be a novel biofilm-carrier for treating sisal pulp leachate. With a loading rate of 9.0 kgVS/m3/day, the packed-bed bioreactor was operated without process stress. Sisal decortication waste (SLDW) and sisal boles (SBW) were found to be suitable for oyster mushroom cultivation. With …

Conservation And Variation Of Dna Methylation In Lactuca Sativa And Lactuca Serriola, Trudi A. Baker

Graduate Doctoral Dissertations

Molecular techniques for guiding plant breeding have successfully used wild progenitors of domestic crops as sources of genetic variants conveying desirable traits. However, epigenetic variation, in particular DNA methylation, is a significant source of phenotypic variation and epigenetic effects of plant domestication are poorly understood. Described herein are the first single-base pair resolution methylomes of the highly valued crop iceberg lettuce (Lactuca sativa cv. Salinas) and its close relative, and ubiquitous weed, L. serriola. This work suggests several roles for acquisition and inheritance of methylation in the evolution of Lactuca spp. in response to stress. The Lactuca spp. have conserved …

Provitamin A Biofortification Of Cassava Enhances Shelf Life But Reduces Dry Matter Content Of Storage Roots Due To Altered Carbon Partitioning Into Starch, Getu Beyene, Felix R. Solomon, Raj D. Chauhan, Eliana Gaitán-Solis, Narayanan Narayanan, Jackson Gehan, Dimuth Siritunga, Robin L. Stevens, John Jifon, Joyce Van Eck, Edward Linsler, Malia Gehan, Muhammad Ilyas, Martin Fregene, Richard T. Sayre, Paul Anderson, Nigel Taylor, Edgar B. Cahoon

Center for Plant Science Innovation: Faculty Publications

Storage roots of cassava (Manihot esculenta Crantz), a major subsistence crop of sub-Saharan Africa, are calorie rich but deficient in essential micronutrients, including provitamin A β-carotene. In this study, β-carotene concentrations in cassava storage roots were enhanced by coexpression of transgenes for deoxy-d-xylulose-5-phosphate synthase (DXS) and bacterial phytoene synthase (crtB), mediated by the patatin-type 1 promoter. Storage roots harvested from field-grown plants accumulated carotenoids to ≤50 lg/g DW, 15- to 20-fold increases relative to roots from nontransgenic plants. Approximately 85%–90% of these carotenoids accumulated as all-trans-β-carotene, the most nutritionally efficacious carotenoid. β-Carotene-accumulating storage roots displayed delayed onset of postharvest …

Inhibition Of Growth And Ammonia Production Of Ruminal Hyper Ammonia-Producing Bacteria By Chinook Or Galena Hops After Long-Term Storage, Michael D. Flythe, Brittany E. Harlow, Glen E. Aiken, Gloria L. Gellin, Isabelle A. Kagan, Jesse Pappas

Animal and Food Sciences Faculty Publications

Surplus hops (Humulus lupulus L.) that are not needed by the brewing industry could be used as a feed supplement for cattle and other ruminants. Previous research indicates that antimicrobial hops plant secondary metabolites (i.e., α- and β-acids) inhibit methane and ammonia production and promote the growth of ruminant animals. The goal was to determine that hop pellets produced for brewing still possessed the requisite antimicrobial activity after 5-year storage. HPLC (high performance liquid chromatography) analysis indicated that the α- and β-acid concentrations in two varieties of hops were relatively stable after 5 years of storage under N_{2 …}

Respons Pertumbuhan Dan Hasil Tanaman Hanjeli Batu (Coix Lacryma-Jobi L.) Akibat Pupuk Silika Cair Dan Paclobutrazol, Tati Nurmala, Agus Wahyudin, Ruminta

Jurnal Kultivasi

Hanjeli batu (Coix lacryma-jobi L.) merupakan salahsatu tanaman pangan alternatif yang memiliki banyak manfaat. Permasalahan utama tanaman ini adalah rendahnya produksi yang disebabkan oleh kurangnya ketersediaan unsur hara dan tinggi tanaman yang terlalu tinggi. Oleh karena itu dilakukan suatu upaya untuk meningkatkan pertumbuhan dan hasil hanjeli batu dengan pupuk silika cair dan paclobutrazol. Penelitian ini bertujuan untuk mengetahui interaksi konsentrasi pupuk silika cair dan konsentrasi paclobutrazol yang memberikan pengaruh terbaik untuk pertumbuhan dan hasil tanaman hanjeli batu (Coix lacryma-jobi L.).Percobaan dilaksanakan di Desa Pasigaran, Kecamatan Tanjungsari, Kabupaten Sumedang, pada November 2016 sampai Mei 2017. Percobaan menggunakan Rancangan Acak Kelompok (RAK) …

A Study On Organic Tomatoes: Effect Of A Biostimulator On Phytochemical And Antioxidant Activities, Varinder Sidhu, Dilip Nandwani, Li Wang, Ying Wu

Agricultural and Environmental Sciences Faculty Research

The objective of the present study is to investigate nutritional and antioxidant activity of four types of organic tomato cultivars. The differences in tomato quality are also tested between groups with or without treatment using an organic biostimulator, Stimplex. Total phenolic compounds (TPC), lycopene, 𝛽-carotene, DPPH free radical scavenging activity, reducing power, and color parameters were investigated in the current study. The results showed that there was no significant difference in TPC among cultivars regardless of Stimplex treatment. Higher lycopene and 𝛽-carotene were obtained in Stimplex treated tomatoes. Lycopene and -carotene contents were significantly different among cultivars (𝑃<0.05). DPPH scavenging activity in controlled group was significantly higher than that in the Stimplex treated tomatoes (𝑃<0.05). No significant difference in reducing power was detected among cultivars treatment groups. The study showed that the darker the tomato color, the higher the lycopene and 𝛽-carotene contents and the stronger the reducing power.

Identifikasi Keragaman Genetik Plasma Nutfah Ubi Kayu Liar (Manihot Glaziovii Muell) Berdasarkan Karakter Morfo-Agronomi, Agung Karuniawan, Hendi N. Wicaksono, Debby Ustari, Tia Setiawati, T Supriatun

Jurnal Kultivasi

Plasma nutfah tanaman merupakan sumber bahan genetik bagi program pemuliaan tanaman. Penelitian ini bertujuan untuk mengidentifikasi keragaman genetik plasma nutfah ubi kayu liar berdasarkan karakter morpho-agronomy. Percobaan dilaksanakan pada bulan Desember 2014 hingga Juni 2015. Rancangan percobaan menggunakan Rancangan Acak Kelompok (RAK) dengan perlakuan 23 aksesi ubi kayu liar dan diulang sebanyak dua kali. Analisis komponen utama menghasilkan biplot dengan nilai PC1 dan PC2 yang memiliki kontribusi terbesar terhadap variasi yaitu masing-masing sebesar 27.98% dan 19.45%. Analisis klaster menghasilkan gambar dendogram terdiri dari dua klaster utama yaitu I dan II. Pada gambar dendogram terdapat jarak euclidean antara 0.00 hingga 3.32. …

Morphological Variation And Inter-Relationships Of Quantitative Traits In Enset (Ensete Ventricosum (Welw.) Cheesman) Germplasm From South And South-Western Ethiopia, Zerihun Yemataw, Alemayehu Chala, Daniel Ambachew, David J. Studholme, Murray R. Grant, Kassahun Tesfaye

Agricultural and Environmental Sciences Student Research

Enset (Ensete ventricosum (Welw.) Cheesman) is Ethiopia’s most important root crop. A total of 387 accessions collected from nine different regions of Ethiopia were evaluated for 15 quantitative traits at Areka Agricultural Research Centre to determine the extent and pattern of distribution of morphological variation. The variations among the accessions and regions were significant (p ≤ 0.01) for all the 15 traits studied. Mean for plant height, central shoot weight before grating, and fermented squeezed kocho yield per hectare per year showed regional variation along an altitude gradient and across cultural differences related to the origin of the collection. Furthermore, …

Strengths And Limitations Of Nitrogen Rate Recommendations For Corn And Opportunities For Improvement, Thomas F. Morris, T. Scott Murrell, Douglas B. Beegle, James J. Camberato, Richard B. Ferguson, John H. Grove, Quirine Ketterings, Peter M. Kyveryga, Carrie A.M. Laboski, Joshua M. Mcgrath, John J. Meisinger, Jeff Melkonian, Bianca N. Moebius-Clune, Emerson D. Nafziger, Deanna Osmond, John E. Sawyer, Peter C. Scharf, Walter Smith, John T. Spargo, Harold M. Van Es, Haishun Yang

Plant and Soil Sciences Faculty Publications

Nitrogen fi xation by the Haber–Bosch process has more than doubled the amount of fi xed N on Earth, significantly influencing the global N cycle. Much of this fi xed N is made into N fertilizer that is used to produce nearly half of the world’s food. Too much of the N fertilizer pollutes air and water when it is lost from agroecosystems through volatilization, denitrification, leaching, and runoff. Most of the N fertilizer used in the United States is applied to corn (Zea mays L.), and the profitability and environmental footprint of corn production is directly tied to N …

Human-Bear Interactions Among Black Bears In Bryce Canyon National Park, Utah, And Polar Bears On Alaska's North Slope, Wesley G. Larson

Theses and Dissertations

Human-bear interactions are an important consideration of bear biology, as interactions can lead to destruction of property as well as injury or death for both human and bear. Successful analysis of why these interactions occur can lead to appropriate preventative measures and mitigation of further conflict. Bryce Canyon National Park (BRCA) is comprised of relatively poor bear habitat, but a black bear population exists on the Paunsaugunt Plateau, on which the park occupies the eastern edge. Park managers expressed interest in learning more about bear movements and, specifically, bear use of anthropogenic features following a number of human-bear incidents located …

Horticulture For Pollinator Conservation, Carter M. Westerhold

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Pollinators worldwide are declining. Consequently, the agricultural and ecological services these insects provide are in danger of being lost. Land use intensification, via urbanization, has greatly influenced this decline in pollinators. Luckily, through targeted horticultural practices, stable populations of pollinators can be sustained within urban areas. The horticultural practices of planting diverse floral resources and managing pollinator habitat in urban areas can sustain these populations. Two studies were conducted with the intent to identify horticultural knowledge gaps that could be reduced to aid in pollinator conservation efforts. First, a study to compare Nebraska native and non-native ornamental plants was conducted. …

Horizontal Transmission Of Helicoverpa Armigera Nucleopolyhedrovirus (Hearnpv) In Soybean Fields Infested With Helicoverpa Zea (Boddie), Joseph Lee Black

Graduate Theses and Dissertations

Helicoverpa armigera Nucleopolyhedrovirus (HearNPV) is a commercially available viral biopesticide that targets Heliothines, including Helicoverpa zea (Boddie) (Lepidoptera: Noctuidae), the most damaging pest of soybean (Glycine max (L.) Merrill) in the Mid-South. Previous formulations of HearNPV have been well studied; however, no research has been published on current formulations. The first objective of this thesis was to assess the rate of horizontal transmission of HearNPV in a soybean field infested with H. zea when HearNPV was applied as a bio-insecticide, and to identify arthropods that are important obligate carriers in dissemination. HearNPV spread 200 feet in 3 fields, and was …

In The Field The Women Saved The Crop: The Women’S Land Army Of World War Ii, Denna M. Clymer

Graduate Theses and Dissertations

The Women’s Land Army brought together rural and urban sectors of the United States in a climate of national and regional crisis. By the time the country was cast into war, the agricultural sector was already caught in a downward economic spiral that drove away laborers. With demand falling, and farms propped up only by experiments in subsidy and parity, when military and industrial jobs emerged in urban areas, farm laborers became scarce. At the same time the war created jobs for men outside of the agricultural sector, farm prices recovered and demand soared, forcing farmers to look to women …

Shallow Aggregate Ebb-And-Flow System For Greenhouse Lettuce Production, Joseph Chidiac

Graduate Theses and Dissertations

A novel soilless technique for the production of lettuce was developed and evaluated for its viability for ornamental greenhouse growers adapting their ebb-and-flood irrigation benching systems to diversify into growing lettuce, without having to purchase the conventional nutrient film technique (NFT) or deep flow technique (DFT) hydroponic systems. The experimental design was a three by four factorial, with three treatments for aggregate depth (19, 38, and 57 mm) and four treatments for irrigation frequency (once every 1, 2, 4, or 8 hours), for a total of twelve treatment combinations. Each treatment was replicated three times in a randomized complete block …

Using Remote Cameras To Estimate The Abundance Of Ungulates, Jace C. Taylor

Theses and Dissertations

Many wildlife populations globally are experiencing unprecedented declines, and without accurate and precise estimates of abundance, we will not be able to conserve these vulnerable species. Remote cameras have rapidly advanced as wildlife monitoring tools and may provide accurate and precise estimates of abundance that improve upon traditional methods. Using remote cameras to estimate abundance may be less expensive, less intrusive, less dangerous, and less time consuming than other methods. While it is apparent that remote cameras have a place in the future of wildlife monitoring, research, and management, many questions remain concerning the proper use of these tools. In …

Assembly, Annotation And Optical Mapping Of The A Subgenome Of Avena, Rebekah Ann Lee

Theses and Dissertations

Common oat (Avena) has held a significant place within the global crop community for centuries; although its cultivation has decreased over the past century, its nutritional benefits have recently garnered increased interest for human consumption. No published reference sequences are available for any of the three oat subgenomes. Here we report a quality sequence assembly, annotation and hybrid optical map of the A-genome diploid Avena atlantica Baum and Fedak. The assembly is composed of a total of 3,417 contigs with an N50 of 11.86 Mb and an estimated completeness of 97.6%. This genome sequence will be a valuable research tool …

The Effect Of Preflood Nitrogen And Flood Establishment Timing On Rice Development, Nitrogen Uptake And Grain Yield, Tyler Richmond

Graduate Theses and Dissertations

Urea-N fertilizer is typically applied at the 5-leaf stage to rice (Oryza sativa L.) grown in a dry-seeded, delayed-flood production system. How long the preflood-N can be delayed without adverse effects on yield potential is poorly understood. The research objective was to determine the effects of preflood-N application and flood establishment timing on aboveground-N content, 50% heading, yield components, and grain yield. Trials were established on silt loam soils at the Pine Tree Research Station (PTRS) and Rice Research and Extension Center (RREC) during 2015 and 2016. Urea-N was applied at 0, 45, 90, 135, and 180 kg N ha-1 …

Evaluation Of The Impact Of Tart Cherries Polyphenols On The Human Gut Microbiota And Phenolic Metabolites In Vitro And In Vivo, Alba Claudia Mayta-Apaza

Graduate Theses and Dissertations

Tart cherries are polyphenol abundant stone fruits claimed to exert health benefits further of its nutritional properties. The abundant phytochemicals content in tart cherries also referred as dietary polyphenols have been considered as an effective natural antioxidant when added in daily diet. However, it has been hypothesized the intervention of gut microbiota on the overall functionality of such compounds. This thesis contains a wide-ranging literature review focused on tart cherry as a crop, current market, functional food, and several health benefits. Furthermore, the research done describes and in vitro and in vivo assays of a short-term dietary intervention of tart …

Strong Spatial-Temporal Patterns In Maize Yield Response To Nutrient Additions In African Smallholder Farms, Samuel Njoroge, Antonius G.T. Schut, Ken E. Giller, Shamie Zingore

All Peer-Reviewed Publications

Large variability in crop responses to macronutrient application at various spatial scales present challenges for developing effective fertilizer recommendations for crop production in smallholder farming systems of sub-Saharan Africa. We assessed maize yield responses to nitrogen (N), phosphorus (P) and potassium (K) application and evaluated relationships between crop responses to N, P and K application and soil analysis data. Nutrient omission trials were conducted on 23 farms located in Sidindi, Western Kenya, selected to be representative of the main soil and management factors in maize based systems in Siaya County. Treatments included a control and PK, NK, NP and NPK …

Economic Impact Of The Sugarcane Aphid Outbreak In South Texas, Samuel D. Zapata, Rebekka Dudensing, Danielle Sekula, Gabriela Esparza-Díaz, Raul Villanueva

Entomology Faculty Publications

The objective of this study was to estimate the economic impact of the sugarcane aphid (SCA) outbreak in the Rio Grande Valley (RGV), Texas. Local producers were surveyed to gather detailed information about crop production and pest control practices. Collected data were used to estimate the reduction in profit associated with the SCA infestation, as well as the monetary value of the prevented loss attributed to control efforts. Sorghum industry losses were then used to assess the overall economic impact of the SCA outbreak in the RGV economy.

Diversity In Grain Amaranths And Relatives Distinguished By Genotyping By Sequencing (Gbs), Xingbo Wu, Matthew W. Blair

Agricultural and Environmental Sciences Faculty Research

The genotyping by sequencing (GBS) method has become a molecular marker technology of choice for many crop plants because of its simultaneous discovery and evaluation of a large number of single nucleotide polymorphisms (SNPs) and utility for germplasm characterization. Genome representation and complexity reduction are the basis for GBS fingerprinting and can vary by species based on genome size and other sequence characteristics. Grain amaranths are a set of three species that were domesticated in the New World to be high protein, pseudo-cereal grain crops. The goal of this research was to employ the GBS technique for diversity evaluation in …