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Tripartite Interactions Of Legumes With Arbuscular Mycorrhizal Fungi And Rhizobial Bacteria: Insight Into Plant Growth, Seed Yield, And Resource Exchange, Arjun Kafle

Electronic Theses and Dissertations

Under natural conditions, legumes, such as alfalfa (Medicago) and soybean (Glycine max) are colonized with arbuscular mycorrhizal (AM) fungi and rhizobial bacteria forming tripartite interactions. Legumes are important crop species due to their high nutritional and economic values. Most of the previous literatures focused on experiments with an individual symbiont: either AM fungi or rhizobial bacteria, but not with both symbionts at the same time, thus our current understanding of resource exchange in tripartite interactions is limited. It has been reported that AM fungi primarily provide phosphate (P), nitrogen (N), and other nutritional and non-nutritional benefits while rhizobial bacteria solely …

Genetic Component Effects Of Two Loci On Seed Dormancy, Awn, Low-Temperature Germination, Plant Height, And Flowering Time In Rice (Oryza Sativa L.), Ugur Korkmaz

Electronic Theses and Dissertations

Seed dormancy (SD) is an adaptive trait of both ecological and agricultural importance. Cereal crops have been selected for reduced SD to promote germination, which also caused the pre-harvest sprouting (PHS) problem in crop production. The previous research identified a set of quantitative trait loci (QTL) for SD, including qSD1- 2 and qSD8, in the conspecific weedy and cultivated rice (Oryza sativa). qSD1-2 carries a dormancy-enhancing allele from the cultivated rice and has a pleiotropic effect on plant height. qSD8 carries a dormancy-enhancing allele from the weedy rice and tightly links to qAL8 for awn length. The …

Exploiting The Genetic Diversity Of Wild Ancestors And Relatives Of Wheat For Its Improvement, Jagdeep Singh Sidhu

Electronic Theses and Dissertations

Wheat is the third most staple food worldwide but current 1% annual improvement in the wheat production is insufficient to meet the growing demands in future. The narrow genetic base of wheat limits continuous improvement in wheat productivity and tolerance to biotic and abiotic stresses under changing climate. Wild ancestors and relatives of wheat hold a potential in widening the genetic pool of wheat and enhance its resilience to biotic and abiotic stresses. This study was focused towards characterizing the genetic diversity in wild relatives of wheat for disease resistance and efficient association with diazotrophs. In the first study, we …

Improving The Nutritional Characteristics Of Plant Feedstuff By-Products Using Fungal Metabolism, Jacob Zahler

Electronic Theses and Dissertations

Plant feedstuff by-products such as soy processing wastewater, guar korma meal, and sorghum hominy are very different, however, all possess a rich nutrient profile. Lessening their value is the presence of lignocellulose, plant anti-nutritional factors, and unfavorable protein profiles. Fungal conversion processes are an attractive approach to improving the value of these by-products by degrading detrimental fractions of each while simultaneously creating nutrient-rich cell mass. The aim of this research was to improve the value of each by-product for potential application in monogastric diets such as fish. Fungal organisms, both yeast and filamentous fungi, were examined for their ability to …

Characterization Of Neofabraea Actinidiae And N. Brasiliensis As Causal Agents Of Apple Bull’S-Eye Rot In Southern Brazil, Amauri Bogo, Carla C. Comparin, Rosa M. Valdebenito Sanhueza, Patricia Ritschel, Ricardo T. Casa, Fábio N. Silva, Sydney E. Everhart

Department of Plant Pathology: Faculty Publications

The causal agents of apple bull’s-eye rot in southern Brazil have recently been described as Neofabraea actinidiae and N. brasiliensis. Isolates of both species were evaluated for response of mycelial growth index (MGI) to different temperatures, enzyme production, mycelial growth inhibition and effective concentrations (EC₅₀ and EC₁₀₀) of the fungicides triflumizole, pyrimethanil and thiophanate methyl, as well as aggressiveness on fruits of ‘Fuji’ hybrid and ‘Pink Lady’. There was significantly lower mycelium growth in N. brasiliensis compared with N. actinidiae at all temperatures tested. Neither species grew at 3 and 32°C. There were minor differences in …

Medicinal Properties Of Cyperus Species (Sedge Family, Cyperaceae), Lata Maishaya Udari

Masters Theses

The grasses that yield therapeutically important products are among the least studied in the Cyperaceae family. Herb-based medicine from ancient times have played a vital role in ailments of various disease and nowadays it has been a particular area of interest in medicine. Phytochemicals are inherent compounds derived from plants that are biologically active, non-nutritive chemicals that act as a defensive or prophylactic medicine in humans. Their extracts have proven to show inhibition properties against different microbes. Despite the prevalence of Cyperus species and their traditional use in medicine, the chemical components responsible for their attributes remain largely unknown. This …

Impacts Of Diverse Crop Rotations And Integrated Crop-Livestock System On Soil Quality In South Dakota, Atilla Polat

Electronic Theses and Dissertations

Crop diversification can be beneficial in improving soil quality parameters. Diverse crop rotations and integrated crop-livestock systems (ICLS), are two examples of crop diversification used in this study to assess soil quality. The objectives of this study were to: (i) assess the impacts of diverse rotations on soil quality parameters, and (ii) assess the impacts of low and high stocking density on soil quality parameters. Both of the studies were conducted separately and are presented as two different chapters. To accomplish objective (i), a long-term experiment was selected which was established near Brookings, South Dakota, USA at USDA-ARS lab in …

Soybean Iron Deficiency Chlorosis: Quantitative Trait Locus Validation And Grain Yield Evaluation, Ahmed Charif

Electronic Theses and Dissertations

Soybean production in most of the Northern Great Plain area has been challenged by iron deficiency chlorosis (IDC), which is a physiological problem with a plant grown in high pH, calcareous soil. Developing IDC-resistant cultivars is the best approach to meet this challenge. Currently, this approach is limited by lack of knowledge about genetic resources and mechanisms for resistance to IDC. The objectives of this research were to validate quantitative trait loci (QTL) associated with IDC and to evaluate the effect of IDC on yield in soybean cultivars. To validate the QTL, a population of 201 recombinant inbred lines, which …

Stability Analysis Of Immunogenic Gliadin Accumulation In Hard Red Spring Wheat (Triticum Aestivum L.), Stacy Lindblom-Dreis

Electronic Theses and Dissertations

Misconceptions regarding plant breeding objectives have led to speculation regarding the increasing prevalence of gluten intolerance, wheat allergy, and celiac disease. It is thought that contemporary wheat cultivars accumulate more immunogenic proteins than older cultivars because of supposed genetic changes effected through plant breeding strategies. This study evaluated the stability of gliadin accumulation in 191 hard red spring wheat cultivars grown in 12 location-years. Two enzyme-linked immunosorbent assays (ELISAs) were developed. A paired t test (N = 34) failed to find a statistically significant difference between the experimental ELISAs and the commercial R5 assay measures of mean gliadin (t = …

Soybean Aphid Biotype 4 Resistance In Soja And Soybean Plant Introductions, Sophia R. Conzemius

Electronic Theses and Dissertations

Soybean aphid, Aphis glycines Matsumura, is a major pest to soybean, Glycine max (L.) Merr. Host plant resistance is a management tactic that uses naturally occurring soybean plant defenses to limit soybean aphid pest damage. Virulent soybean aphid biotypes are able to successfully colonize on certain aphid resistant soybean. Soybean aphid biotype 4 is most virulent, overcoming all commercially available soybean aphid resistant soybeans (Rag1, Rag2, and Rag1+Rag2). Additional sources of resistance to avirulent biotypes have been identified in soja and soybean plant introductions (PIs). This study examined those resistant soja and soybean for resistance to the newly found soybean …

Microbial Communities And Their Impact On Bioenergy Crops In Dynamic Environments, Brandon Monier

Electronic Theses and Dissertations

Native perennial grasses, such as prairie cordgrass (PCG, Spartina pectinata Link), and switchgrass (SG, Panicum virgatum L.) have a great potential as bioenergy crops, because they require fewer inputs, produce more energy, and reduce greenhouse gas emissions in comparison to annual cropping systems such as corn and soybean. SG has been selected by the U.S. Department of Energy for development as bioenergy crop, but studies have shown that PCG can outcompete switchgrass in terms of biomass production. These crops can also form associations with a wide variety of plant growth promoting microbes including arbuscular mycorrhial (AM) fungi. In CHAPTER 2, …

Application Of Machine Learning Methodologies For Predicting Corn Economic Optimal Nitrogen Rate, Zhisheng Qin, D. Brenton Myers, Curtis J. Ransom, Newell R. Kitchen, Sang-Zi Liang, James J. Camberato, Paul R. Carter, Richard B. Ferguson, Fabian G. Fernandez, David W. Franzen, Carrie A. M. Laboski, Brad D. Malone, Emerson D. Nafziger, John E. Sawyer, John F. Shanahan

Department of Agronomy and Horticulture: Faculty Publications

Determination of in-season N requirement for corn (Zea mays L.) is challenging due to interactions of genotype, environment, and management. Machine learning (ML), with its predictive power to tackle complex systems, may solve this barrier in the development of locally based N recommendations. The objective of this study was to explore application of ML methodologies to predict economic optimum nitrogen rate (EONR) for corn using data from 47 experiments across the US Corn Belt. Two features, a water table adjusted available water capacity (AWC_wt) and a ratio of in-season rainfall to AWC_wt (RAWC_wt), were …

Plant Growth Promoting Properties Of Phosphate Solubilizing Bacillus Species Isolated From The Aegean Region Of Turkey, Pinar Sözer Bahadir, Fakhra Li̇aqat, Rengi̇n Eltem

Turkish Journal of Botany

Bacillus species, due to their soil amendment properties, are important members of plant-growth-promoting rhizobacteria (PGPR). In this study, with the aim to discover potential biofertilizers, 440 Bacillus isolates from different sources were screened qualitatively for phosphate solubilizing and positive isolates were processed for quantitative estimation of solubilized phosphate and organic acid production. Organic acid production was initially detected by pH change of the media, whereas further confirmation and quantitative estimation were done by gas chromatography (GC). The results indicate that phosphate solubilization ranges from 6.9 ± 1.00 to 95.5 ± 1.83 µg mL$^{-1}$ for Bacillus isolates and most of the …

Determination Of Soil Nutrient Status In Vuralia Turcica Populations Growing At Different Locations In The Central Anatolia Region Of Turkey, Di̇lek Tekdal, Burçi̇n Çingay, Mehmet Seli̇m Çeti̇ner

Turkish Journal of Botany

This study is an overview of the importance of soil nutrients for the maintenance of Vuralia turcica, which is an endemic in Turkey due to its natural habitats. Electrical conductivity, pH, and mineral element content (macroelements: nitrogen, phosphorus, potassium, calcium, magnesium, and sodium, and microelements: boron, cadmium, copper, iron, manganese, nickel, lead, and zinc) were analyzed in 21 soil samples taken at 30?60 m depth at 21 points from 8 different locations where V. turcica was growing to determine nutrient content, which is important for soil fertility and controls the crop yield. According to pH analysis, all samples were strongly …

Bioinformatics Prediction And Annotation Of Cherry (Prunus Avium L.) Micrornas And Their Targeted Proteins, Iftekhar Ahmed Baloch, Muhammad Younas Khan Barozai, Muhammad Din

Turkish Journal of Botany

MicroRNAs (miRNAs) are important noncoding regulatory RNAs. They are expressed endogenously and are 18-26 nucleotides in length. These small molecules are conserved evolutionarily within the same kingdom and their conserved nature becomes an important logical tool for the quest of conserved miRNAs in other species by homology search using bioinformatics tools. Cherry (Prunus avium L.) is one of the important and nutritious species of the family Rosaceae, mainly distributed in temperate climate. This research is an attempt to identify and characterize conserved miRNAs in cherry from express sequence tags (ESTs). Bioinformatics analysis of cherry ESTs resulted in the identification of …

Diversity And Functional Traits Of Spontaneous Plant Species In Algerian Rangelands Rehabilitated With Prickly Pear (Opuntia Ficus-Indica L.) Plantations, Souad Neffar, Taha Menasria, Haroun Chenchouni

Turkish Journal of Botany

The prickly pear (Opuntia ficus-indica L. Miller) is a xerophytic cactus species widely cultivated in arid and semiarid regions worldwide and used in rehabilitation programs of rangelands in Algeria since 1990. This study analyzed the diversity and functional traits of plant species established in prickly pear plantations growing under arid and semiarid climates. A 3-year plant assessment (2008-2010) was carried out using ecological descriptors (abundance, species richness, diversity indices, disturbance index, and Jaccard index) and plant functional traits (life forms, chorological types, dispersal types, Grime's, Noy-Meir's strategies, and morphological types). The results revealed 36 and 31 species in arid and …

Gamma Irradiation Enhancement Of Biofilm Production In Bacillus Amyloliquifaciensand Effect Of Mutants' Inoculation On Apx1 Expression In Salt-Stressed Egyptian Barley, Reda Gaafar, Wedad Kasim, Rania Abou-Ali, Mohamed Omar, Heba Hewait

Turkish Journal of Botany

Gamma rays are known to induce random mutations, which are used to enhance the production of biofilms in bacteria. Therefore, to improve the activity of biofilm formation in wild Bacillus amyloliquefaciens (HM6), this bacterial strain was mutated using five doses of gamma irradiation. Sixteen mutants and their wild strain B. amyloliquefaciens (HM6) were tested for biofilm formation under two different (250 and 350 mM) NaCl concentrations. Only six mutants exhibited a significant increase in biofilm formation under 350 mM NaCl. Inoculation of salt-stressed Giza123 barley seedlings with the two mutants (M1 and M7), which showed distinguishable rep-PCR patterns, and their …

Identification Of Qtl Modifying The Activity Of The Tcb1-S Locus And Characterization And Sequencing Of Two Plutonium-Beryllium Induced Reduced Gametophyte Transmission Mutants In Maize, Merritt Bryer Burch

Electronic Theses and Dissertations

This thesis is split into two independent projects both involving the male gametophyte generation of maize. The first project looks at how pollen interacts with the female gametophyte to reduce its transmission in cross-incompatible reactions controlled by the unilateral cross-incompatibility system, teosinte crossing barrier 1. The second project explores two plutonium-beryllium induced male gametophyte mutants and attempts to uncover their genetic basis.

Identification of QTL Modifying the Activity of the Tcb1-s Locus
Teosinte crossing barrier 1 (Tcb1) is a unilateral cross-incompatibility system present in maize that provides a pre-zygotic pistil barrier to plants carrying Tcb1-s (strong allele) from pollen …

Relationship Between New Farming Practices And Chemical Use And The Consumption Of Giant Cricket (Brachytrupes Membranaceus Drury, 1770), F. O. Miantsia, F. Meutchieye, S. Niassy

All Peer-Reviewed Publications

The current work is aimed at generating information on giant crickets and the impact of commonly used pesticides on the natural population of these crickets. Data was collected based on interviews and complemented with field observations. Out of 319 respondents surveyed, 290 were aware of the use of the giant cricket as a food source, and 161 were active consumers. Regarding the availability of the giant cricket, respondents reported that the crickets' populations were diminishing because of farming practices. About 219 persons reported that commonly used herbicides harm giant crickets at different stages. This could be attributed to the scarcity …

Evaluation Of Photosynthesis Process Under Drought-Stress Condition Of Chromosome Segment Substitution Line Populations With ‘Khao Dawk Mali 105’ Rice Genetic Background For Drought-Responsive Gene Identification And Characterization, Kansinee Hungsaprug

Chulalongkorn University Theses and Dissertations (Chula ETD)

This research aims to evaluate the photosynthesis-related parameters in chromosome segment substitution lines (CSSL), containing drought tolerant region from DH212 in a ‘KDML105’ genetic background. Screening at seedling stage indicated that CSSL4 was more tolerant to drought stress than ‘KDML105’ with the higher maximum quantum yield of Photosystem II (Fv/Fm). At vegetative stage, CSSL4 tended to have the higher level of light-saturated net photosynthetic rate (PNmax), stomatal conductance (gs), electron transport rate (ETR) and effective quantum yield of photosystem II photochemistry (FPSII), when compared to the ‘KDML105’ after 9 days of water withholding. Moreover, the flag leaves of CSSL4 and …

Contents, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Agricultural Information Needs And Food Access In The Stann Creek District Of Belize, Sam E. Harris, Donna L. Graham

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

The purpose of this study was to describe agricultural information sources available to farmers and to describe food access and availability for the people of Dangriga, Stann Creek, Belize. This study used descriptive survey research methods with convenience sampling of the general public (n=22) and of farmers (n = 38) in the summer of 2017. Farmers use a variety of agricultural information sources with the extension service cited most often, followed by friends and fellow farmers. Weather, lack of information, pests, and inadequate access to capital were of primary concern for farmers. Face-to-face meetings were used most often by extension …

Letter From The Dean, Deacue Fields

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Evaluating Consumer Sensory And Composition Attributes Of Arkansas-Grown Fresh-Market Blackberries, Aubrey N. Dunteman, Renee T. Threlfall, John R. Clark, Margaret L. Worthington

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Blackberries are grown worldwide for commercial fresh markets. Three Arkansas-grown fresh-market blackberry genotypes (‘Natchez’, ‘Ouachita’, and A-2418) were evaluated for consumer sensory and compositional attributes at the University of Arkansas Food Science Department, Fayetteville. The compositional attributes of the blackberries were within an acceptable range for commercial markets (soluble solids=8.20-11.90%, pH=2.79-3.18, titratable acidity=1.09-1.32%). In terms of soluble solids to titratable acidity ratio, ‘Ouachita’ (10.92) had the highest ratio, followed by ‘Natchez’ (8.93) and A-2418 (6.25). A consumer sensory panel (n=80) evaluated fresh-market blackberry attributes using a 9-point hedonic scale for overall impression, overall flavor, sweetness, and sourness and a 5-point …

Pollinator Power: Supporting Bees Through Ecoregion Specific Planting Guides, Maya Thomas

Scripps Senior Theses

The pollination of flowering crops by bees is an invaluable ecosystem service that supports biodiversity and much of the global agricultural system. Pollinators move pollen between the male structures of a plant to the female structures of a plant of the same species. This fertilizes the female plant, which then produces the next generation. This process also provides the pollinator with the nectar or pollen it needs to survive. While some plants transfer pollen through different means, the majority of plants need help from pollinators to reproduce. Depending on the means of pollination, pollination can be classified as abiotic or …

Evaluation Of Tannins And Anthocyanins In Marquette, Frontenac, And St. Croix Cold-Hardy Grape Cultivars, Somchai Rice, Jacek A. Koziel, Murlidhar Dharmadhikari, Anne Fennell

Agronomy, Horticulture and Plant Science Faculty Publications

Cold-hardy grape cultivars have become popular in northern regions. Wines from these cultivars are low in tannins and lighter in color compared to Vitis vinifera. The northern regions are striving to enhance desired ″full body″ and red color qualities in the wine produced from cold-hardy grapes. The objective of this study was to compare tannin and pigment content in skins and seeds of three cold-hardy red grape cultivars, at two time points, from two locations, using the Adams-Harbertson (A-H) assay. The A-H assay is based on protein precipitation and spectrophotometry. Total tannin concentrations detected in Frontenac, Marquette, and St. Croix …

Corn Grain Yield Components And Nutrient Accumulation In Response To Nitrogen, Plant Density And Hybrid, Maria Julia Santoro

Theses and Dissertations--Plant and Soil Sciences

Modern maize hybrids exhibit higher yields, increased biomass production, stress tolerance and greater nitrogen (N) use efficiency. Increased biomass accumulation can influence nutrient uptake and lead to increased nutrient removal. Hybrids were tested at seeding rates (SR) of 74000 (low) and 148000 (supraoptimal) plants ha^-1 and at N rates of 0 (deficient) and 390 (non-limiting) kg N ha^-1. Plants were sampled at V7, V14, R3, R5 and R6 and separated into vegetative and reproductive fractions for determination of dry matter and N accumulation. Grain yield was harvested at R6.

The high SR and high N treatment combination …

Growth, Fitness, And Overwinter Survival Of A Shattercane (Sorghum Bicolor Ssp. Drummondii) × Grain Sorghum (Sorghum Bicolor Ssp. Bicolor) F2 Population, Jared J. Schmidt, Melinda K. Yerka, Jeffrey F. Pedersen, John L. Lindquist

Department of Agronomy and Horticulture: Faculty Publications

Although sorghum [Sorghum bicolor (L.) Moench ssp. bicolor] is the fifth most important grain crop in terms of global production, no commercial hybrids carry genetically engineered (GE) traits for resistance to insect pests or herbicides due to regulatory concerns about gene flow to weedy relatives. However, non-GE herbicide resistance currently is being developed in grain sorghum and will likely transfer to related weeds. Monitoring the impact of this new nuclear technology on the evolution and invasiveness of related weeds requires a baseline understanding of the population biology of grain sorghum genes once they transfer to in situ weed …

Hunger In The Land Of Plenty: Local Responses To Food Insecurity In Iowa, Gabrielle E. Roesch-Mcnally, Jacqueline Ann Nester, Andrea D. Basche, Eric Christianson, Emily Zimmerman

Department of Agronomy and Horticulture: Faculty Publications

Story County (estimated population 92,406 in 2013) lies in the heart of central Iowa, a state renowned for its remarkable agricultural productivity. Iowa leads all states for production of corn, soybean, and hogs. Revenues from agricultural products in Iowa total more than $30 billion annually according the 2012 Agricultural Census (USDA-NASS 2014). This productivity stems from a favorable natural and political environment. The temperate climate, productive soils, and gentle topography are ideal for our production system of commodity agriculture facilitated by federal policies, which include subsidized crop insurance and commodity payments (Horrigan, Lawrence, and Walker 2002). Despite this productivity and …

Engineering Linear, Branched-Chain Triterpene Metabolism In Monocots, Chase Kempinski, Zuodong Jiang, Garrett Zinck, Shirley J. Sato, Zhengxiang Ge, Thomas E. Clemente, Joe Chappell

Department of Agronomy and Horticulture: Faculty Publications

Triterpenes are thirty-carbon compounds derived from the universal five-carbon prenyl precursors isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Normally, triterpenes are synthesized via the mevalonate (MVA) pathway operating in the cytoplasm of eukaryotes where DMAPP is condensed with two IPPs to yield farnesyl diphosphate (FPP), catalyzed by FPP synthase (FPS). Squalene synthase (SQS) condenses two molecules of FPP to generate the symmetrical product squalene, the first committed precursor to sterols and most other triterpenes. In the green algae Botryococcus braunii, two FPP molecules can also be condensed in an asymmetric manner yielding the more highly branched triterpene, botryococcene. Botryococcene …