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Small Rnas Meet Their Targets: When Methylation Defends Mirnas From Uridylation, Guodong Ren, Xuemei Chen, Bin Yu

Center for Plant Science Innovation: Faculty Publications

Small RNAs are incorporated into Argonaute protein-containing complexes to guide the silencing of target RNAs in both animals and plants. The abundance of endogenous small RNAs is precisely controlled at multiple levels including transcription, processing and Argonaute loading. In addition to these processes, 3' end modification of small RNAs, the topic of a research area that has rapidly evolved over the last several years, adds another layer of regulation of their abundance, diversity and function. Here, we review our recent understanding of small RNA 3' end methylation and tailing.

Landscape Mulches, Recycling Yard Waste, And Fertilizing Appropriately, Adam Pitcher, John J. Pipoly Iii

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

No abstract provided.

Botanists In The Canyonlands Of The Colorado Plateau – 1950–1983 & Prior, Stanley L. Welsh, Glen Moore

Books by Faculty of the Monte L. Bean Life Science Museum

Abstract

This paper provides an overview of botanical investigations in southeastern Utah, but is not so-restricted geographically. It grew out of the discovery of decades-old manuscripts on the flora of what became Canyonlands National Park in 1964, but from those typescript copies the coverage grew outward geographically and backward in time to the earliest inhabitants of what is today known as the Four Corners Region of the American Southwest. Reviewed is the account of utilization of the region and its natural resources by aboriginal inhabitants who were familiar with all of it. That early, and to an extent, continuous occupation …

Hanging Gardens Of The Colorado: Jewels In The Crown—Canyonlands Versus Zion Canyon, Stanley L. Welsh

Books by Faculty of the Monte L. Bean Life Science Museum

Abstract

Descriptions and types of Utah’s hanging gardens. This work includes a comparison of hanging gardens in Canyonlands versus Zion Canyon, as well as the plant and animal assemblages found there. Five types of gardens and alcoves are defined and the different types found in both national parks are described. Maps of hanging garden locations and extensive photographs of the flora and fauna are provided.

Table of Contents (abridged)

Prolog

Canyonlands Gardens

Geomorphology

Types of Gardens and Alcoves

Zion Canyon Gardens

Terrace-type Gardens

Plant Communities

Stream Courses

Geographic Affinities of Hanging Gardens

Restricted or Unusual Plants

Plant Succession

Appendix I: …

2014 Greatplants Gardener, Jan Riggenbach, Rachel Anderson, Ryan Armbrust, Laura Armbrust, Bob Henrickson, Louise Lynch, Doug Golick

Nebraska Statewide Arboretum: Publications

One of the goals of the GreatPlants program is to promote tough plants for the landscape, plants that are more resilient in the extreme weather of the Great Plains. With so many plants to choose from, it can be overwhelming for gardeners to decide what to plant. We hope GreatPlants can be your guide to some staggeringly beautiful—and long-lived—plants.

Bioeconomic Factors Of Beef Heifer Maturity To Consider When Establishing Criteria To Optimally Select And/Or Retain Herd Replacements, M. C. Stockton, R. K. Wilson, D. M. Feuz, L. A. Stalker, R. N. Funston

West Central Research and Extension Center, North Platte

Understanding the biology of heifer maturity and its relationship to calving difficulty and subsequent breeding success is a vital step in building a bioeconomic model to identify optimal production and profitability. A limited dependent variable probit model is used to quantify the responses among heifer maturities, measured by a maturity index (MI), on dystocia and second pregnancy. The MI account for heifer age, birth BW, prebreeding BW, nutrition level, and dam size and age and is found to be inversely related to dystocia occurrence. On average there is a 2.2% increase in the probability of dystocia with every 1 point …

Caracterización Morfoagronómica De 15 Accesiones De Sorgo (Sorghum Bicolor L Moench) Con Bajo Contenido De Lignina, Dora Antonia Villeda Castillo

INTSORMIL Scientific Publications

La presente investigación se realizó durante los meses de diciembre de 2011 a marzo de 2012, en la Estación Experimental San Andrés 1, del Centro Nacional de Tecnología Agropecuaria y Forestal (CENTA), del Ministerio de Agricultura y Ganadería ubicado en el municipio de Ciudad Arce, departamento de La Libertad, con el objetivo de caracterizar 15 accesiones de sorgo bmr, con bajo porcentaje de lignina; utilizando descriptores morfoagronómicos para definir su identidad, utilizando descriptores sugeridos por el Instituto Internacional de Investigación de Cultivos para las Zonas Tropicales Semiáridas (ICRISAT), ocho de los cuales son cuantitativos y 17 cualitativos. La metodología utilizada …

Principles Of Florida-Friendly Landscaping(Tm), John J. Pipoly Iii

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Florida-Friendly Landscaping(Tm) Right Plant, Right Place; Integrated Pest Management; And Attracting Wildlife, John J. Pipoly Iii

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Key Roles Of Sub-Cellular Membranes And Co-Chaperone In Tombusvirus Replication, Kai Xu

Theses and Dissertations--Plant Pathology

Positive strand RNA viruses, inculding tombusviruses, are known to utilize cellular membranes to assemble their replicase complexes (VRCs). Two tombusviruses , Tomato bushy stunt virus (TBSV) and Carnation Italian ringspot virus (CIRV), replicate on different organellar membranes, peroxisomes or endoplasmic reticulum (ER) for TBSV and mitochodria outer membranes in case of CIRV. I showed that both TBSV and CIRV replicase proteins could assemble VRCs and replicate viral RNA on purified microsomes (ER) and mitochondria. Different efficiencies of assembly was shown determined by multiple domains on TBSV or CIRV replication proteins.

To study why VRC assembly could occur on an alternative …

H3k27me3 And H3k4me3 Chromatin Environment At Super-Induced Dehydration Stress Memory Genes Of Arabidopsis Thaliana, Ning Liu, Zoya Avramova, Michael Fromm

School of Biological Sciences: Faculty Publications

Pre-exposure to a stress may alter the plant’s cellular, biochemical, and/or transcriptional responses during future encounters as a “memory” from the previous stress. Genes increasing transcription in response to a first dehydration stress, but producing much higher transcript levels in a subsequent stress, represent the super-induced “transcription memory” genes in Arabidopsis thaliana. The chromatin environment (histone H3 tri-methylations of Lys 4 and Lys 27, H3K4me3, and H3K27me3) studied at five dehydration stress memory genes revealed existence of distinct memory-response subclasses that responded differently to CLF deficiency and displayed different transcriptional activities during the watered recovery periods. Among the most …

Effects Of Virus On Plant Fecundity And Population Dynamics, Holly R. Prendeville, Brigitte Tenhumberg, Diana Pilson

Brigitte Tenhumberg Papers

Microorganisms are ubiquitous and thought to regulate host populations. Although microorganisms can be pathogenic and affect components of fitness, few studies have examined their effects on wild plant populations. As individual traits might not contribute equally to changes in population growth rate, it is essential to examine the entire life cycle to determine how microorganisms affect host population dynamics. In this study, we used data from common garden experiments with plants from three Cucurbita pepo populations exposed to three virus treatments. These data were used to parameterize a deterministic matrix model, which allowed us to estimate the effect of virus …

Forage News [2014-01], Department Of Plant And Soil Sciences, University Of Kentucky

Forage News

• Grazing, Health & Animal Rights
• Forage Workers Heading for Memphis
• Forage Variety Reports Now Available
• Heart of America Grazing Conference will help Producers Improve Forages
• Dugger Brings Cotton Council Experience to National Hay Association
• Bermudagrass Stem Maggot found in Allen County
• Farmland Value Reaches Historic $8,716 Statewide Average
• Farmer-to-Farmer Mentoring - Delivering Real Change in Practice on UK Livestock Farms
• Novel Approaches to Developing On-farm Biomass Production Systems

Ether Bridge Formation And Chemical Diversification In Loline Alkaloid Biosynthesis, Juan Pan

Theses and Dissertations--Plant Pathology

Loline alkaloids, found in many grass-Epichloë symbiota, are toxic or feeding deterrent to invertebrates. The loline alkaloids all share a saturated pyrrolizidine ring with a 1-amine group and an ether bridge linking C2 and C7. The steps in biosynthesis of loline alkaloids are catalyzed by enzymes encoded by a gene cluster, designated LOL, in the Epichloë genome. This dissertation addresses the enzymatic, genetic and evolutionary basis for diversification of these alkaloids, focusing on ether bridge formation and the subsequent modifications of the 1-amine to form different loline alkaloids.

Through gene complementation of a natural lolO mutant and comparison …

Beta Diversity Of Urban Floras Among European And Non-European Cities, Frank A. La Sorte, Myla F.J. Aronson, Nicholas S.G. Williams, Laura Celesti-Grapow, Sarel Cilliers, Bruce D. Clarkson, Rebecca W. Dolan, Andrew Hipp, Stefan Klotz, Ingolf Kühn, Pter Pyšek, Stefan Siebert, Marten Winter

Scholarship and Professional Work - LAS

Aim- Cities represent an ideal study system for assessing how intensive land-use change and biotic interchange have altered beta diversity at broad geographic extents. Here we test the hypothesis that floras in cities located in disparate regions of the globe are being homogenized by species classified as invasive (naturalized species that have spread over a large area) or as a European archaeophyte (species introduced into Europe before ad 1500 from the Mediterranean Basin). We also test the prediction that the global influences of European activities (colonization, agriculture, commerce) have supported this outcome.

Location- One hundred and ten cities …

Characterization Of Putative Defense Genes In Nonvascular Plants, Blaine Harlan

Undergraduate Honors Thesis Collection

Vascular plants have many known defenses against herbivory and pathogen infection. One inducible defense system that has been extensively studied in vascular plants is systemic acquired resistance (SAR), which is a plant-wide response that results in resistance to a wide range of pathogens Many genes that play a role in SAR have been characterized. Although several studies of plant-pathogen interactions in non-vascular plants have occurred, it was not until recently that the existence of SAR was shown in these plants. The goal of the present study was to confirm the presence of homologous defense genes in moss, and to study …

Chemical Control Of Turfgrass Diseases 2014, Paul Vincelli, Gregg Munshaw

Agriculture and Natural Resources Publications

Turfgrasses under intensive management are often subject to outbreaks of infectious diseases. Diseases usually are most damaging when weather or cultural conditions favor the disease-causing agent but not plant growth and vigor. Cultural conditions that predispose turfgrass to diseases include close mowing, inadequate or excessive nitrogen fertility, light or frequent irrigation, excessive thatch, poor drainage, and shade.

Good turf management practices often greatly reduce the impact of disease by promoting healthy plants that are better able to resist infections. Even under good management, however, diseases sometimes cause excessive damage to highly managed turfgrasses. The proper use of fungicides in these …

Plant Community Composition And Structure Monitoring For Agate Fossil Beds National Monument, 2013 Annual Report, Isabel W. Ashton, Michael Prowatzke

United States National Park Service: Publications

Introduction

During the last century, much of the prairie within the Northern Great Plains has been plowed for cropland, planted with non-natives to maximize livestock production, or otherwise developed, making it one of the most threatened ecosystems in the United States. Within Nebraska, greater than 77% of the area of native mixed-grass prairie has been lost since European settlement (Samson and Knopf 1994). The National Park Service (NPS) plays an important role in preserving and restoring some of the last pieces of intact prairies within its boundaries. The stewardship goal of the NPS is to “preserve ecological integrity and cultural …

Sudden Aspen Decline Report For Spruce Beetle Epidemic And Aspen Decline Management Response Eis, Jim Worrall, Suzanne Marchetti, Gerald E. Rehfeldt

Aspen Bibliography

Aspen is an important component of GMUG’s forests. Over 288,000 ha (712,000 acres) of aspendominated forest type (TAA) occur across the GMUG (Table 1). Just over half (55%) of the aspen forest type is outside wilderness and roadless areas.

Letter From The Dean, Michael Vayda

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Palatability Of Teff Grass By Horses, Rachel R. Cummins, Kenneth Coffey, Nancy Jack, Kathleen Jogan, Edward Gbur, Robert Rhein, Dirk Philipp, Melissa Adams, William Smith, Katherine Clayton

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Most forages commonly used to feed horses have potential detriments including blister beetles or excessive fiber concentrations. Teff grass (T), a warm-season annual forage, has the potential to be a good alternative for horses because of its lack of observed disorders. Our objective was to compare preference by horses for T harvested under different conditions with that of bermudagrass (B) harvested at two maturities. Six different forages were evaluated: T harvested at the late vegetative stage (TLV), at late bloom but that incurred 33 mm of rainfall between mowing and baling (TLBR), with caryopsis visible (TES), or at soft dough …

Steer Stress Response As Affected By Genotype And Transportation, Megan Wary, Marites Sales, Ben Williamson, Ken Coffey, Michael Looper, Charles Rosenkrans Jr.

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Bovine cytochrome P450 3A28 is responsible for metabolizing ergot alkaloids that cattle ingest when feeding on endophyte-infested tall fescue grass. The objective of this research was to determine associations among genotype, transportation, and stress responses. Angus crossbred steers (n = 47) were genotyped (CC, CG, or GG) for a single-nucleotide polymorphism (C994G) in cytochrome P450 3A28. Genotypes were determined by polymerase chain reaction (PCR) amplification followed by restriction enzyme (Alu1) digestion. Steers were backgrounded on a mixed-cultivar tall fescue pasture. Following the stocker phase, steers were transported to the feedlot for finishing. Stress responses were determined 27 h prior to, …

Society Islands: Tahiti, Raiatea, Huahine, Bora Bora, Maupiti, French Polynesia, Stanley L. Welsh

Books by Faculty of the Monte L. Bean Life Science Museum

This account details five trips to the Society Islands and the plants collected there, along with the author’s personal experiences during those years. The resulting publication that aids in Society Island plant identification is Flora Societensis. Welsh and his wife became acquainted with the islands through a Tahitian girl that lived with them for a few years, and who they kept in contact with for years after. The Welshes were invited to Tahiti through these connections, and thus the following research and adventures occurred. The account includes details of island culture along with descriptions of species found there. Plant …

Soil And Biosolid Nano- And Macro-Colloid Properties And Contaminant Transport Behavior, Jessique L. Ghezzi

Theses and Dissertations--Plant and Soil Sciences

Despite indications that they are potential contaminant transport systems and threats to groundwater quality, very little effort has been invested in comparing contaminant transport behavior of natural environmental nanocolloids and their corresponding macrocolloid fractions in the presence of As, Se, Pb, and Cu contaminants. This study involved physico-chemical, mineralogical, stability and contaminant-transport characterizations of nano- (< 100 nm) and macro-colloids (100-2000 nm) fractionated from three Kentucky soils and one biosolid waste. Particle size was investigated with SEM/TEM and dynamic light scattering. Surface reactivity was estimated using CEC and zeta potential. Mineralogical composition was determined by XRD, FTIR, and thermogravimetric analyses. Sorption isotherms assessed affinities for Cu²⁺, Pb²⁺, AsO₃^-, and SeO₄^-2 contaminants, while settling kinetics experiments of suspensions at 0, 2 and 10 mg/L contaminants determined stability and transportability potential. Undisturbed 18x30 cm KY Ashton Loam soil monoliths were also used for …

Characterization Of The Role Of Salicylic Acid In Plant-Pathogen Interactions In Moss, Erica Grabinski

Undergraduate Honors Thesis Collection

The central objective of this project is to explore defense systems that are induced in two moss species, Amblystegium serpens and Physcomitrella patens, upon inoculation with the fungus, Pythium irregulare. In vascular plants, systemic defense is associated with the plant hormone salicylic acid (SA). I hypothesize that when the moss are treated exogenously with SA, the organisms will undergo a systemic defense response, which will involve the induction of defense-related genes and increased resistance to future P. irregulare infection, that is directly correlated with the amount of hormone applied. If the role of SA in plant defense in A. serpens …

Saudi Arabian Students In Detroit Use Natural Health Products More So Than Other University Students In Detroit, Samiah Naji Alqahtani

Wayne State University Theses

Natural Health Products (NHP), are defined as products that derive from organisms and may include supplements and herbal/traditional remedies. Prior research indicates that females use NHP more than males. We have unpublished data to show that students use NHP for health maintenance with significantly different use of NHP by Native/Aboriginal students vs. other students. Less is known about Saudi students. We hypothesize that: (1) There are gender differences in NHP used; and (2) There are geo-ethnic differences in NHP used. We also determine the predictor variables that influence NHP use by students. Students from Wayne State University (n=560; 193 …

Uncovering Organosulfur Natural Products In The "Shy-Plant" Mimosa Pudica Via Direct Analysis In Real Time Mass Spectrometry : Volatiles Emission From Touch Sensitive Roots, Max Jacob Maron

Legacy Theses & Dissertations (2009 - 2024)

Mimosa pudica L. (Mimosaceae) is a small shrub endemic to South America, now pantropically distributed. M. pudica displays the properties of seismonasty where the leaves fold and stems droop in response to both touch, as well as nyctinasty, a type of circadian rhythm. It was previously reported that the principal component of the odor that is produced when M. pudica is uprooted is caused by CS2 and COS, both of which were detected by GC-MS. The present study has found that the roots emit a foul odor in response to direct root stimulation. Further, neither CS2 nor COS were observed …

Glycine Betaine-Induced Lead Toxicity Tolerance Related To Elevated Photosynthesis, Antioxidant Enzymes Suppressed Lead Uptake And Oxidative Stress In Cotton, Saima Aslam Bharwana, Shafaqat Ali, Muhammad Ahsan Farooq, Naeem Iqbal, Amjad Hameed, Farhat Abbas, Muhammad Sajid Aqeel Ahmad

Turkish Journal of Botany

Anthropogenic activities contaminate soils with heavy metal concentrations including lead (Pb), cadmium (Cd), copper (Cu), and chromium (Cr). Pb has higher potential for ready accumulation, sedimentation, and poisoning of the soil than other heavy metals. The present study was conducted to induce Pb tolerance, in solution culture-grown cotton, by exogenous glycinebetaine (GB) application using 3 levels of Pb (0, 50, and 100 µm) and 2 GB levels (0 and 1 mM). The results revealed that Pb stress decreased gas exchange characteristics (net photosynthetic rate, stomatal conductance, transpiration rate, water use efficiency, chlorophyll, carotenoids, and SPAD value) and the performance of …

Identification Of Stable Sources For Surrogate Traits In Arachis Glabrata And Marker-Trait Association For Tolerance To Water Deficit Stress, Sandip Kumar Bera, Ajay Basapur Chandrashekar, Sneha Patel, Vrajlal Kanji Sojitra, Anil Maurya

Turkish Journal of Botany

Diploid and tetraploid wild relatives of cultivated peanut are genetically diverse, providing rich sources of genetic resources for tapping resistance to various biotic and abiotic stresses. Arachis glabrata Benth. is a tetraploid (2n = 40) rhizomatous species that is reported to be tolerant to water deficit stress. Identification of A. glabrata accessions with high SPAD chlorophyll meter reading (SCMR) and low specific leaf area (SLA) values would be an option for improving water deficit stress tolerance in peanut. An investigation was undertaken to study the genetic diversity of A. glabrata accessions using molecular markers as well as surrogate traits (SLA …

Heavy Metal Accumulation And Genotoxicity Indicator Capacity Of The Lichen Species Ramalina Pollinaria Collected From Around An Iron Steel Factory In Karabük, Turkey, Demet Cansaran Duman, Ersi̇n Altunkaynak, Emi̇ne Sümer Aras

Turkish Journal of Botany

In the present work, Ramalina pollinaria (Westr.) Ach. specimens collected from around an iron steel factory in Karabük were analyzed due to their heavy metal accumulation by atomic absorption spectrometry. The specimens were also evaluated for pollution-induced DNA damage by random amplified polymorphic DNA (RAPD) assay. Genomic template stabilities were calculated from the changes in RAPD profiles and compared with heavy metal content in R. pollinaria. The results obtained from chemical analysis suggest that R. pollinaria is a particularly suitable lichen species for the detection of air quality. Results of RAPD assay showed significant differences in band patterns in R. …