Digital Commons Network^™

Engineering Plant Biomass Lignin Content And Composition For Biofuels And Bioproducts, Cassie Marie Welker, Vimal Kumar Balasubramanian, Carloalberto Petti, Krishan Mohan Rai, Seth Debolt, Venugopal Mendu

Horticulture Faculty Publications

Lignin is an aromatic biopolymer involved in providing structural support to plant cell walls. Compared to the other cell wall polymers, i.e., cellulose and hemicelluloses, lignin has been considered a hindrance in cellulosic bioethanol production due to the complexity involved in its separation from other polymers of various biomass feedstocks. Nevertheless, lignin is a potential source of valuable aromatic chemical compounds and upgradable building blocks. Though the biosynthetic pathway of lignin has been elucidated in great detail, the random nature of the polymerization (free radical coupling) process poses challenges for its depolymerization into valuable bioproducts. The absence of specific …

Sustaining The Saco Estuary: Final Report 2015, Christine B. Feurt Ph D, Pamela A. Morgan, Mark D. O. Adams, Anna L. Bass, Carrie J. Byron, Michael C. Daley, Michael O. Esty, Noah G. Perlut, Kayla Smith, Tyler Spillane, Michelle M. Steen-Adams, James Sulikowski, Stephan I. Zeeman, Jacob Aman, Michele Dionne, Jeremy Miller, Kristin Wilson

Environmental Studies Faculty Publications

This study focuses on the Saco estuary, the tidal portion of the Saco River, which drains the largest watershed in southern Maine. With headwaters in the White Mountains of New Hampshire, the watershed encompasses more than 4,400 km², and provides clean healthy drinking water to over 100,000 people living and working in communities in southern Maine.

When the study began in 2009, very little was known about the ecology of the Saco estuary. Researchers at the University of New England and the Wells National Estuarine Research Reserve employed the process of collaborative learning to bring together people who …

Transport Regimes And Spread Of The Common Reed, Phramites Australis, In The Saco River, Me, Usa, Michelle A. Slater

All Theses And Dissertations

Allee effects are important to species invasions because population growth may be limited by low outcrossing potential in newly founded populations leading to depressed levels of fitness. Non-native Phragmites australis (common reed) has been present in the United States for over 200 years, but has been slow to reach some areas, possibly owing to the Allee phenomenon, whereby young or isolated Phragmites patches with initially low genotypic richness are slow to recruit viable seedlings due to inbreeding, which limits the rate of patch expansion. In order to explore the importance of the Allee effect in a recently invaded system, the …

Occurrence Of An Herbicide-Resistant Plant Trait In Agricultural Field Margins, Karla L. Gag, David J. Gibson, Bryan G. Young, Julie M. Young, Joseph L. Matthews, Stephen C. Weller, Robert G. Wilson

Department of Agronomy and Horticulture: Faculty Publications

Agricultural environments allow study of evolutionary change in plants. An example of evolution within agroecological systems is the selection for resistance to the herbicide glyphosate within the weed, Conyza canadensis. Changes in survivorship and reproduction associated with the development of glyphosate resistance (GR) may impact fitness and influence the frequency of occurrence of the GR trait. We hypothesized that site characteristics and history would affect the occurrence of GR C. canadensis in field margins. We surveyed GR occurrence in field margins and asked whether there were correlations between GR occurrence and location, crop rotation, GR crop trait rotation, crop type, …

Plant Species' Origin Predicts Dominance And Response To Nutrient Enrichment And Herbivores In Global Grasslands, Eric W. Seabloom, Elizabeth T. Borer, Yvonne M. Buckley, Elsa E. Cleland, Kendi F. Davies, Jennifer Firn, W. Stanley Harpole, Yann Hautier, Eric M. Lind, Andrew S. Macdougall, John L. Orrock, Suzanne M. Prober, Peter B. Adler, T. Michael Anderson, Jonathan D. Bakker, Lori A. Biederman, Dana M. Blumenthal, Cynthia S. Brown, Lars A. Brudvig, Marc Cadotte, Chengjin Chu, Kathryn L. Cottingham, Michael J. Crawley, Ellen I. Damschen, Carla M. Dantonio, Nicole M. Decrappeo, Guozhen Du, Philip A. Fay, Paul Frater, Daniel S. Gruner, Nicole Hagenah, Andy Hector, Helmut Hillebrand, Kirsten S. Hofmockel, Hope C. Humphries, Virginia L. Jin, Adam Kay, Kevin P. Kirkman, Julia A. Klein, Johannes M. H. Knops, Kimberly J. La Pierre, Laura Ladwig, John G. Lambrinos, Qi Li, Wei Li, Robin Marushia, Rebecca L. Mcculley, Brett A. Melbourne, Charles E. Mitchell, Joslin L. Moore, John Morgan, Brent Mortensen, Lydia R. O'Halloran, David A. Pyke, Anita C. Risch, Mahesh Sankaran, Martin Schuetz, Anna Simonsen, Melinda D. Smith, Carly J. Stevens, Lauren Sullivan, Elizabeth Wolkovich, Peter D. Wragg, Justin Wright, Louie Yang

Plant and Soil Sciences Faculty Publications

Exotic species dominate many communities; however the functional significance of species' biogeographic origin remains highly contentious. This debate is fuelled in part by the lack of globally replicated, systematic data assessing the relationship between species provenance, function and response to perturbations. We examined the abundance of native and exotic plant species at 64 grasslands in 13 countries, and at a subset of the sites we experimentally tested native and exotic species responses to two fundamental drivers of invasion, mineral nutrient supplies and vertebrate herbivory. Exotic species are six times more likely to dominate communities than native species. Furthermore, while experimental …

Growing South Dakota (Summer 2015), College Of Agriculture &. Biological Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

[Page] 2 Exciting New Era Underway: New Facilities & New Degree Offerings Coming To Fruition
[Page] 5 USDA Report Touts Agriculture Among Best Fields For College Grads
[Page] 6 Critical Need: Essential Services Of ADRDL Need Support For Modernized Facility
[Page] 8 Quarterly Colloquium: State's Ag Leaders Collaborate
[Page] 9 Profiles In Leadership: Developing A Museum To Enrich And Transform Lives
[Page] 10 Productive Partnerships: Collaboration Between Producers & Researchers Guides Research Farm Efforts
[Page] 12 Coordinated Effort: SDSU's John Ball Serves Dual Role To Benefit South Dakota's Trees
[Page] 14 Progressive Perspective: Dan Oedekoven Reflects On Extension's Evolution
[Page] …

Ua24 Mcicsl Newsletter - July 2015, Shannon R. Trimboli Education Coordinator

MCICSL Newsletter

This issue includes the following:

Interns with The Nature Conservancy Participate in Research at Mammoth Cave

Renaissance in Cave Biology Research Underway

as well as Summer research projects, in the news and White-nose Syndrome workshop

Nebline, July 2015

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Feature: Reduce Bullying and Cyberbullying Through Social and Emotional Learning

Food & Health

Family Living

Farm & Acreage

Horticulture

Pests & Wildlife

4-H & Youth

Extension Calendar

and other extension news and events

Alliaria Petiolata (M.Bieb.) Cavara & Grande [Brassicaceae], An Invasive Herb In The Southern Ozark Plateaus: A Comparison Of Species Composition And Richness, Soil Properties, And Earthworm Composition And Biomass In Invaded Versus Non-Invaded Sites, Jennifer D. Ogle

Graduate Theses and Dissertations

Invasive species are widely recognized as organisms that severely alter ecosystem processes in the habitats to which they are introduced. Alliaria petiolata is one of the most important invasive plants in forests of the northern United States. This study examined the geographic distribution of the plant in the southern Ozarks, as well as the effect that it may be having on natural processes within forests of the region by comparing plant species richness, plant cover, and soil properties in invaded and non-invaded plots. It was found that A. petiolata is not significantly altering species richness, cover, or soil properties in …

Introducing Green Manures In An Organic Soybean–Winter Wheat–Corn Rotation: Effects On Crop Yields, Soil Nitrate, And Weeds, Katja Koehler-Cole

School of Natural Resources: Dissertations, Theses, and Student Research

In organic soybean– winter wheat – corn rotations, animal manure is a common choice to maintain high yields, but leguminous crops grown as green manures after wheat harvest and incorporated into the soil before corn planting, can be an alternative when animal manure is not accessible. Forage legumes with high dry matter (DM) production and high biological N fixation have been shown to meet corn N demand. However, in Eastern Nebraska, lack of precipitation can reduce green manure growth and N fixation, leading to an insufficient N supply for corn, but corn growth can also be impacted by green manure …

Early Weaning Reduces Rangeland Herbage Disappearance, Patricia Johnson, Kenneth C. Olson, Roger N. Gates, Hubert H. Patterson, Mindy Hubert, Douglas Landbloom, Janna J. Kincheloe, Heather A. Richter, Allison V. Grove

Natural Resource Management Faculty Publications

Early weaning of beef calves reduces nutrient and forage demand in a cow–calf enterprise, potentially contributing to reduction in forage utilization on the pasture from which calves are removed by a nonlactating cow vs. a cow–calf pair. Research was conducted to evaluate weaning beef calves 90 days early (EW) vs. normal weaning (NW) on pasture herbage disappearance in mixed-grass prairie pastures in the northern Great Plains. Spring-calving cows (n = 48) were utilized in each study year (2003, 2004, and 2006) from the date of early weaning (August) until the date of normal weaning (November). Cow–calf pairs were randomly …

Functional Analysis Of The Mms19 Gene In Carica Papaya, Jorge A. Trujillo

Theses and Dissertations - UTB/UTPA

All organisms face DNA-damaging radiation in the form of UV light and must have mechanisms to repair or undo damage. Plants being stationary organisms must cope with damaging UV rays in a molecular fashion and so have developed many forms of resistance. MMS19 is implicated in DNA repair indirectly as a nuclear encoded gene that binds onto protein assembly complexes in the cytosol. A mutant within the SunUp variety of Carica papaya has a large deletion for MMS19 and presents a diminutive phenotype. Deficient DNA repair mechanisms will shunt cells out of the natural cell cycle and reduce cell proliferation …

Development Of A Dna Barcoding Reference Library For Identification Of Medicinal Plant Materials Used In The Rio Grande Valley Of Texas: A Representative Case Study Using Arnica (Asteraceae), Hector G. Aguilar De Alba

Theses and Dissertations - UTB/UTPA

DNA barcoding is a technique that uses a short DNA fragment to identify a specimen to the species level. This technique is essential in situations where a lack of distinguishing morphological characteristics makes identification impossible. In the Río Grande Valley a variety of herbal supplements are cheap, readily available and sold as “Arnica” with no information to identify the contents. The appearance of dried and shredded material suggests that a variety of plant species are involved, belonging to the family Asteraceae. Arnica montana, also part of Asteraceae, is found in Europe and has anti-inflammatory properties used to externally treat bruises …

Effects Of Management Practices On Grassland Plant And Bird Community Composition In Kane County Forest Preserves, Colleen R. Zumpf

All Student Theses and Dissertations

Loss of grassland ecosystems over the past century has increased importance of efforts to improve and restore habitat for native plant species and the biotic communities they support. As a result of these efforts, biotic and abiotic conditions and interactions with the environment are altered. Species evolution based on these particular environmental conditions has caused many species to be mapped onto various environmental gradients which can be defined as niche separation. This study attempted to determine what environmental gradients had the strongest impact upon grassland bird and plant species niche separation, particularly those gradients defined by management activities such as …

Alternative Restoration Treatments To Maximize Growth And Survival Of Tamaulipan Thornscrub Species During Seeding Establishment, Jennifer Lynn Vela

Theses and Dissertations - UTB/UTPA

Anthropogenic activities that destroy, degrade, or fragment terrestrial ecosystems have long-lasting detrimental impacts on ecosystem function, services, and biodiversity. The Tamaulipan thornscrub ecoregion of south Texas and northeastern Mexico has sustained considerable loss, degradation, and fragmentation due land conversion for agriculture, urbanization, and introduction of invasive flora and fauna. In an attempt to restore habitat for endangered and migratory animals, United States Fish and Wildlife Service has undertaken a large-scale thornscrub revegetation effort in south Texas. The goal of this study was to develop effective restoration techniques to promote growth and survival of Tamaulipan thornscrub species during seedling establishment. Beginning …

Biochemical And Proteomic Profiling Of Maize Endosperm Texture And Protein Quality, Kyla J. Morton

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The research described herein, focuses on the biochemical and proteomic analysis of the maize endosperm and what influences kernel texture. Quality Protein Maize (QPM) is a hard endosperm version of the high-lysine opaque2 (o2) mutant but the genes involved in modifying the soft o2 endosperm are unknown. Pyrophosphate (PPi)-dependent fructose 6-phosphate 1-phosphotransferase (PFP) catalyzes the ATP-independent conversion of fructose 6-phosphate to fructose 1, 6-bisphosphate in glycolysis. We found a large increase in transcript and protein levels of the alpha regulatory subunit of PFP (PFPα) in QPM endosperm. In vitro enzyme assays show a significant increase in forward PFP …

Long-Term Effects Of Alternative Residue Management Practices On Near-Surface Soil Properties And Soybean Production In A Wheat-Soybean, Double-Crop System In Eastern Arkansas, Christopher Ryan Norman

Graduate Theses and Dissertations

Adoption of management practices that maintain or increase soil organic matter (SOM), which contains 58% carbon (C) on average, may help to mitigate climate change by sequestering atmospheric C. Therefore, the main objective of this study was to determine the long-term trends in SOM, soil C and nitrogen (N), bulk density, various soil chemical properties (i.e., pH, electrical conductivity [EC], and Mehlich-3-extractable nutrients) in the top 10 cm, and soybean yield as affected by residue burning (burning and non-burning), tillage (conventional and no-tillage), irrigation (irrigated and non-irrigated), and N-fertilization/residue level (high and low) in a wheat (Triticum aestivum L.)-soybean [Glycine …

Prokaryotic Diversity In The Rhizosphere Of Organic, Intensive, And Transitional Coffee Farms In Brazil, Adam Caldwell, Livia Silva, Cynthia Da Silva, Cleber Ouverney

Faculty Publications, Biological Sciences

Despite a continuous rise in consumption of coffee over the past 60 years and recent studies showing positive benefits linked to human health, intensive coffee farming practices have been associated with environmental damage, risks to human health, and reductions in biodiversity. In contrast, organic farming has become an increasingly popular alternative, with both environmental and health benefits. This study aimed to characterize and determine the differences in the prokaryotic soil microbiology of three Brazilian coffee farms: one practicing intensive farming, one practicing organic farming, and one undergoing a transition from intensive to organic practices. Soil samples were collected from 20 …

Predicting The Impact Of Temperature Change On The Future Distribution Of Maize Stem Borers And Their Natural Enemies Along East African Mountain Gradients Using Phenology Models, Sizah Mwalusepo, Henri E.Z. Tonnang, Estomih S. Massawe, Gerphas O. Okuku, Nancy Khadioli, Tino Johansson, Paul André Calatayud, Bruno Pierre Le Ru

All Peer-Reviewed Publications

Lepidopteran stem borers are among the most important pests of maize in East Africa. The objective of the present study was to predict the impact of temperature change on the distribution and abundance of the crambid Chilo partellus, the noctuid Busseola fusca, and their larval parasitoids Cotesia flavipes and Cotesia sesamiae at local scale along Kilimanjaro and Taita Hills gradients in Tanzania and Kenya, respectively. Temperature-dependent phenology models of pests and parasitoids were used in a geographic information system for mapping. The three risk indices namely establishment, generation, and activity indices were computed using current temperature data record from local …

Clonal Integration And Ramet Development In Quaking Aspen, Anson Call, Dr. Samuel St. Clair

Journal of Undergraduate Research

Clonal plants are important contributors to natural environments and can have disproportionate effects on ecosystem function. In the mountain west, the clonal species Populus tremuloides (quaking aspen) is critical in helping to regulate ecosystem function; healthy aspen stands support a diverse group of plants and animals. Aspen are in decline across the west, due to climate change (increased drought), changing fire cycles, and increasing pressure from herbivores like deer and elk. Understanding the natural processes that enable aspen to survive and grow will help us protect aspen in the future. Clonality, or the ability to reproduce asexually through root suckering, …

Cpsf30 At The Interface Of Alternative Polyadenylation And Cellular Signaling In Plants, Manohar Chakrabarti, Arthur G. Hunt

Plant and Soil Sciences Faculty Publications

Post-transcriptional processing, involving cleavage of precursor messenger RNA (pre mRNA), and further incorporation of poly(A) tail to the 3' end is a key step in the expression of genetic information. Alternative polyadenylation (APA) serves as an important check point for the regulation of gene expression. Recent studies have shown widespread prevalence of APA in diverse systems. A considerable amount of research has been done in characterizing different subunits of so-called Cleavage and Polyadenylation Specificity Factor (CPSF). In plants, CPSF30, an ortholog of the 30 kD subunit of mammalian CPSF is a key polyadenylation factor. CPSF30 in the model plant Arabidopsis …

Factors Constraining The Reproductive Output Of Baptisia Alba Macrophylla, Ashley Morgan Hembrough

Theses and Dissertations

Baptisia alba macrophylla, a native, herbaceous perennial legume, produces inflorescences with a large number of flowers, yet matures relatively few fruits. We hypothesized that the number of seeds matured by B. alba macrophylla is maximized based on resource availability at each stage of development, but this optimal number is further compromised by extrinsic factors including pollen limitation and pre-dispersal seed predation by the weevils Apion rostrum and Tychius sordidus. To test this hypothesis, we conducted a field experiment at two sites: (i) the John English Prairie, located in Hudson, IL, and also (ii) the Sugar Grove Nature Center and Funks …

Flowers In Space Attacked By Aliens: Understanding The Spatial Ecology Behind The Devastating Damage By A Thistle Bud Weevil On Pitcher’S Thistle At Whitefish Dunes State Park, Wi, Zechariah D. Meunier

Lawrence University Honors Projects

One of the most threatened plants in the Great Lakes region is Pitcher’s thistle (Cirsium pitcheri), which inhabits sand dunes along the shorelines of Lakes Michigan, Huron, and Superior. In addition to risks from habitat loss and invasive species, C. pitcheri are imperiled by a thistle bud weevil (Larinus planus) that was originally distributed for biological control of nonnative thistles. During the summer of 2014, we empirically studied the devastating damage caused by L. planus on a population of C. pitcheri at Whitefish Dunes State Park, WI, to determine what factors influence the distribution and intensity …

Plant Community Associations Of Two Invasive Thistles, Emily S.J. Rauschert, Katriona Shea, Sarah Goslee

Biological, Geological, and Environmental Faculty Publications

In order to combat the growing problems associated with biological invasions, many researchers have focused on identifying which communities are most vulnerable to invasion by exotic species. However, once established, invasive species can significantly change the composition of the communities that they invade. The first step to disentangling the direction of causality is to discern whether a relationship with other vegetation exists at all. Carduus nutans and C. acanthoides are similar invasive thistles, which have caused substantial economic damage worldwide. We assessed the associations between the thistles and the standing flora in four sites in central Pennsylvania in which they …

Ua24 Mcicsl Newsletter - June 2015, Shannon R. Trimboli Education Coordinator

MCICSL Newsletter

This issue includes the following:

Dayton Regional STEM School participates in 5 citizen science projects over 2 days

Public dye traces provide valuable research knowledge and public engagement

Barren County Middle School students collect dragonfly larvae for multi-park citizen science project

as well as Summer research projects, in the news and new interns.

Nebline, June 2015

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Feature: After-Harvest Care Of Asparagus

Food & Health

Family Living

Farm & Acreage

Horticulture

Pests & Wildlife

4-H & Youth

Extension Calendar

and other extension news and events

Bot Fly Infestation Of Thirteen-Lined Ground Squirrels In Colorado Shortgrass Steppe, Kim Conway, Paul Stapp

The Prairie Naturalist

We studied prevalence of bot fly infestation of thirteen-lined ground squirrels (Ictidomys tridecemlineatus) trapped during 13 years of population monitoring in shrub and grassland habitats in northern Colorado. We also investigated effects of prescribed burning, a common habitat management practice in grasslands, on bot fly prevalence. Infested squirrels were rarely located on shrub sites and during spring (May–Jun) trapping. Across all summers, mean prevalence in grasslands was 7.9% (range: 2.1–23.8%), with years of highest prevalence corresponding to years when the fewest hosts were captured in spring. Infested squirrels had from one to seven warbles, with 46.7% having only one warble. …

Habitat-Related Differences In Necroph- Ilous Species Composition: Implications For Resource Competition, Adrienne L. Conley, Elisabeth K. Jorde, Rachel E. Jorde, Lauren K. Yares, Kenzie K. Lee, Carrie L. Hall, Daniel R. Howard

The Prairie Naturalist

Competition for resources is one of the most important selective factors influencing the expression of life history traits in both plants and animals (Darwin 1859). In grasslands, competition for resources such as nutrients, water, and space often is constrained by stochastic processes (Axelrod 1985). Disturbance factors such as fire, grazing by large herbivores, and fluctuating climatic conditions tend to alter the structure and magnitude of competition for limited resources among grassland communities more frequently than in other ecosystems (Snaydon 1987, van der Maarel 1993). Vertebrate carrion is one important resource used by both plants and animals in grasslands, providing a …

Genetic Engineering Online Lessons Improve Teaching And Increase Knowledge And Accepting Attitudes Among Students, Grace Troupe

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Genetic engineering has been used in the production of food in the U.S. for nearly three decades, however, science literacy in genetic engineering among consumers is still low. To address this problem, an online resource called The Journey of a Gene (passel.unl.edu/ge) was created to help incorporate genetic engineering education in high school and college curriculums. Here we report two studies conducted to evaluate the effectiveness of The Journey of a Gene in 1) improving student knowledge and attitudes about genetic engineering and 2) helping teachers increase their knowledge as well as quantity and quality of genetic engineering instruction. In …

The Biological Consequences Of Kaolin Geophagia, Deloris Alexander, Desire Richardson, Lakisha Odom, Kara Cromwell, Dejuana Grant, Micoya Myers, Eddy Cadet, Hamid Mahama, Vijaya Rangari, Ralphenia Pace, Ramble Ankumah, Kokoasse Kpomblekou-A, Curtis Fluker

Professional Agricultural Workers Journal

Abstract

Kaolin geophagia is associated with the relief of gastrointestinal distress, but it may also cause adverse health effects on the body. This study was designed to: assess kaolin composition; test if 129SvEv mice would consume kaolin and determine the consequences of consumption; and assess rotational stress modulation of consumption. Thirteen kaolin samples were purchased from Alabama and Georgia stores. Chemical and physical properties were characterized for each sample using a Munsell chart, pH meter, Energy Dispersive Spectroscopy, Transmission Electron Microscopy, Visible Near-InfraRed Spectra, and Inductively Coupled Plasma-Optical Emission Spectrometry. Kaolin was then given to mice as food supplements and …