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The Stability Of Epigenetic Variants That Can Act As Loci Causing Phenotypic Change, Raul Faburrieta

Biology Theses

Epigenetic variations are a possible source of heritable phenotypic variation. In this study I focus on phenotypic alterations seen in epigenetic Recombinant Inbred Lines (epiRILs) of Arabidopsis thaliana. These epiRILs allow me to study the effects differentially methylated regions (DMRs) have on phenotypic variance. In a study performed in 2014 by Cortijo et al., they found that DMR’s affect flowering time and root length when grown under greenhouse conditions. In this study, I replicated the Cortijo et al. (2014) study, with some changes, to see whether the same significant eQTL regions are found. I found that, some of the eQTLs …

The Influence Of Stage Of Ripeness On Consumer Perceptions Regarding Selected Aspects Of Non-Astringent Asian Persimmons (Diospyros Kaki Thunb), Robert A. Mirabello Jr

LSU Doctoral Dissertations

Asian Persimmon (Diospyros kaki Thunb.) is an important fruit crop in Asia and in recent decades has experienced expanding production around the world. Non-astringent cultivars are highly desirable in world markets. In the United States the Asian Persimmon is lesser known and consumed although it can be successfully grown in California and the Southeastern United States.This novel study examined the physical/chemical properties of the non-astringent Asian Persimmon ‘Jiro’ grown in Southern Louisiana at three distinct stages of ripeness described as Green (mid-September harvest), Light Orange (mid-October harvest) and Dark Orange (mid-November harvest). Data collected included color, weight, size, soluble …

Effects Of Fast And Slow-Wilting Soybean Genotypes On Fall Armyworm (Spodoptera Frugiperda) Growth And Development, Jessica Ayala, Alejandro Vasquez, Devi Balakrishnan, Evelyn Madrigal, Justin George, Rupesh R. Kariyat

School of Integrative Biological & Chemical Sciences Faculty Publications

Soybean (Glycine max) is the most important plant protein source, and Fall Armyworm (FAW, Spodoptera frugiperda) is considered a major pest. This study aimed to examine the impact of FAW feeding on soybean accessions that vary in their water use efficiency (WUE) traits, by examining FAW growth and life history parameters along with plant growth response to pest damage. Soybean accessions were grown in a greenhouse and exposed to FAW larval feeding for 48 h at three different soybean growth stages: V3, R3, and R6. The growth and development of the FAW and soybeans were monitored. Results showed …

Assessing The Use Of Regenerative Agriculture In California Almonds As Climate Change Resilience, Skyler M. Seamons

Master's Projects and Capstones

The agriculture sector is responsible for 10% of the United States’ greenhouse gas emissions. In turn, anthropogenic climate change threatens crops. With its Mediterranean climate, California is the country’s largest agricultural-producing state. Many California crops are at risk due to increasing temperatures and changed precipitation patterns. This paper investigates regenerative farming techniques as a tool to protect California crops from a changing climate. Almonds are used as a case study to analyze the soil management practices, finances, and policies underlying regenerative agriculture in California. A literature review and comparative analysis are used to compare regenerative and conventional soil management practices …

Comparing Long‑Term Patterns Of Spread Of Native And Invasive Plants In A Successional Forest, Matthew H. Yamamoto, Chad C. Jones

Botany Faculty Publications

A fundamental question in invasive plant ecology is whether invasive and native plants have different ecological roles. Differences in functional traits have been explored, but we lack a comparison of the factors affecting the spread of co-occurring natives and invasives. Some have proposed that to succeed, invasives would colonize a wider variety of sites, would disperse farther, or would be better at colonizing sites with more available light and soil nutrients than natives. We examined patterns of spread over 70 years in a regenerating forest in Connecticut, USA, where both native and invasive species acted as colonizers. We compared seven …

Adopting Yield-Improving Practices To Meet Maize Demand In Sub-Saharan Africa Without Cropland Expansion, Fernando Aramburu-Merlos, Fatima A. M. Tenorio, Nester Mashingaidze, Alex Sananka, Stephen Aston, Jonathan J. Ojeda, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Maize demand in Sub-Saharan Africa is expected to increase 2.3 times during the next 30 years driven by demographic and dietary changes. Over the past two decades, the area croppedwithmaize has expanded by 17million hectares in the region, with limited yield increase. Following this trend could potentially result in further maize cropland expansion and the need for imports to satisfy domestic demand. Here, we use data collected from 14,773 smallholder fields in the region to identify agronomic practices that can improve farm yield gains. We find that agronomic practices related to cultivar selection, and nutrient, pest, and crop management can …

Eco-Assessment Of Phytoplankton Composition In Relation To Environmental Conditions Of Saltwater And Freshwater Lakes In The Konya Closed Basin (Türkiye), Abuzer Çelekli, Ömer Lekesiz, Tolga Çetin

Turkish Journal of Botany

Great importance is given to maintaining lentic ecosystems, threatened by human-induced consequences worldwide. The present study hypothesized to assess differences in species-environment relationships and ecological status of 15 lakes (saline water systems, high-altitude freshwater lakes, and other freshwater lakes) in the Konya Closed River Basin using phytoplankton indices throughout wet and dry periods. Results of canonical correspondence analysis separated saline and freshwater (high-altitude) habitats, which were characterized by different phytoplankton species. Total phosphorus (TP), electrical conductivity (EC), nickel-Ni, and altitude were the most influential environmental factors affecting phytoplankton dispersal in these ecosystems. Saline lakes were under pressure of high EC, …

Two New Species Of Inocybe (Inocybaceae: Agaricomycetes) From Turkey Based On Morphological Characteristics And Phylogenetic Evidence, Oğuzhan Kaygusuz, Ditte Bandini, Henning Knudsen, Meike Piepenbring

Turkish Journal of Botany

During a survey of agarics in the Mediterranean region of southwestern Turkey, some noteworthy mushrooms were collected. Among the specimens, two represent new species of Inocybe which are proposed and illustrated in this study as Inocybe pseudogeophylla and I. succinea. Molecular phylogenetic analyses based on a nuc rDNA ITS1-5.8S-ITS2 (ITS) and partial 28S rDNA (LSU) dataset reveal that these species belong to the Inocybe geophylla group. The sequences of the new species form two independent lineages and differ from the known species of Inocybe by a unique combination of morphological characteristics. Detailed macro- and micromorphological features, colour photographs, habitat and …

And Food Justice For All: Advancing Access To Just And Sustainable Food Systems, Makenna Grace Landry

Graduate Student Portfolios, Professional Papers, and Capstone Projects

A collection of work exploring food justice and food access programming in Western Montana, as well as a critique of the Bayer-Monsanto merger.

With Love, ; An Interdisciplinary And Intersectional Look At Why Creativity Is Essential, Theo Starr Gardner

Whittier Scholars Program

My Whittier Scholars Program self-designed major, Teaching Creativity, is a mixture of Art, Literature, and Education classes. My research and praxis classes have been focused on the ‘how?’s and 'why?’s of creativity, so it felt only right that my project should be a constructivist, generative project. The project I have been working on throughout my time at Whittier, and that has just fully come to fruition on April 11th, 2024, was a solo art gallery/open mic event entitled ‘With Love,’. With Love, was conceptually inspired by the research I’ve conducted on creativity and creative arts education over the past few …

Assessing Structural Variation In And Out Of The Classroom: Characterizing Structural Variation Within Campanula Americana And Effects Of Long Read Sequencing On Students Learning, Tyler Gandee

Masters Theses, 2020-current

Cytonuclear incompatibilities are proposed to be one of the first genetic barriers to arise during speciation, so understanding the underlying evolutionary forces that contribute to cytonuclear incompatibilities is important. Many studies have looked at SNP level variation in the plastid genome and its relationship with cytonuclear incompatibility, but no studies have examined structural variation and its relationship to cytonuclear incompatibility, particularly at the early stages of speciation, i.e. within species. Campanula americana is a great system for this because it exhibits cytonuclear incompatibility and the family in which it is found, the Campanulaceae, exhibits rapidly evolving plastid genomes, including …

The Ecology And Genetic Diversity Of Buckleya Distichophylla (Santalaceae), Montana Hill

Masters Theses, 2020-current

Piratebush (Buckleya distichophylla) is a native, rare, shrub found along the Blue Ridge mountains in North Carolina, Virginia, and Tennessee. Research on its ecology and genetic diversity is limited due to its rarity; only one population on Poor Mountain has been studied extensively in the past. To determine if there are ecological differences between populations of B. distichophylla, research on sex distribution, floral visitors, individual length, leaf area, and amount of light that reached each specimen were conducted and then compared between a population located on Dragon’s Tooth Trail and a population on Poor Mountain, both located …

Creating Sustainable School And Home Gardens: Welcoming Pollinators, Kaitlin Cambell, Rita Hagevik, Kathy Cabe Trundle

All Current Publications

This fact sheet is part of a series about creating sustainable school and home gardens. It focuses on welcoming pollinators to the garden by providing a safe and effective habitat, and lists recommended plantings and resources.

New York City’S Rising Sea Level And Coastal Erosion: Approaches To Resiliency, Ryder D. Isidro

Student Theses 2015-Present

No abstract provided.

Lmpact Of Salmonella Enterica Effector Proteins On Plant Physiology And Immunity, Sara Qader

Honors Theses

Salmonella enterica serovar Typhimurium are primarily recognized as pathogens associated with foodborne illnesses in humans. Salmonella also can colonize plant tissue effectively. The pathogen relies on type III secretion systems (T3SS) to infect mammals and plants successfully and counteract the immune response. Understanding the molecular mechanisms underlying Salmonella’s interactions with plants is essential for developing effective strategies to reduce its impact on human health and agriculture. Effector proteins, known for their role in modulating host-pathogen interactions, have been implicated in the virulence and pathogenicity of Salmonella. However, their specific functions and contributions to Salmonella’s interactions with plants remain largely unknown. …

Identifying High-Value Tactical Livestock Decisions On A Mixed Enterprise Farm In A Variable Environment, Michael Young, John Young, Ross S. Kingwell, Philip E. Vercoe

Animal production and livestock research articles

Context

Australia is renowned for its climate variation, featuring years with drought and years with floods, which result in significant production and profit variability. Accordingly, to maximise profitability, dryland farming systems need to be dynamically managed in response to unfolding weather conditions.

Aims

The aim of this study is to identify and quantify optimal tactical livestock management for different weather-years.

Methods

This study employed a whole-farm optimisation model to analyse a representative mixed enterprise farm located in the Great Southern region of Western Australia. Using this model, we investigated the economic significance of five key livestock management tactics. These included …

Annual Pasture Quantity And Quality In South West Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

The productivity of sheep is largely governed by the amount of pasture they eat and this is influenced by the quantity of the pasture on offer and its quality. Assessing pasture quantity and quality throughout the growing season gives managers the information they need to manage animal performance and pasture condition.

The Department of Primary Industries and Regional Development provides this information for farmers to help improve the productivity and profitability of the livestock industry in Western Australia.

Changes In Soil Chemical Attributes, Horticultural Performance And Fruit Yield Of Peach Cultivars Following Preplant And Annual Applications Of Composted Mulch Amendments, Jeffrey Hopkins

All Theses

Southeastern peach orchards often have poor soil quality due to native soil composition, intensive farming practices and generational replanting of trees in the same locations. This study investigated using mulch amendments to improve the chemical and physical quality of soil prior to planting a new peach orchard. At the beginning of the four-year study, a single-ground municipal composted mulch was incorporated into the soil at two different rates and three cultivars of peaches, ‘Rubyprince’, ‘Julyprince’, and ‘BigRed’ were planted on berms. Thereafter, the same mulch product was annually applied to the top of the berms at two different rates to …

Barley Production: Effects Of Weather Damage And Varietal Purity On Quality, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

Australian barley is regarded for its quality and suitability for both malting and animal feed, although varietal differences and environmental conditions during production can influence its quality.

Reconnecting With Nature One Classroom At A Time, Bianca Apuzzo

Senior Honors Projects

Environmental science is more important to today’s society than it has ever been, and developing basic ecoliteracy is the easiest way we can work towards a more sustainable future. Ecoliteracy allows us to connect deeper to nature and provides us with the information needed to protect and restore our beautiful planet. We are rolling downhill, picking up speed as we go, through a silent mass extinction. The scariest part of it all: nobody seems to care.

In response to the lack of environmental education provided to today’s students, I have created a syllabus for a high school level science course …

Forage News [2024-05], University Of Kentucky

Forage News

No abstract provided.

Nebline, May 2024

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Weed Control in Pastures and Hayfields by John Nelson

Navigating Nutrition Information: Separating Fact from Fiction by Alyssa Havlovic

Recipe of the Month: Pepper Steak Sandwich by Alyssa Havlovic

Care for New Bedding Plants by Sarah Browning

Garden Guide: Things to Do This Month

Cash Rent Survey

No Matter Where You Live, Submit a Request Before You Dig! by Becky Schuerman

4-H Achievement Celebration

8 Lancaster County 4-H’ers Modeled Their Sewn Garments at Omaha Fashion Week

4-H Events Open to All Youth

Support 4-H by Eating Out, May 1 & 2

Support 4-H During “Give to Lincoln Day,” May 30 …

Using Annual Forages To Replace Declining Cool-Season Grass Pasture Availability, Jonathon Matthew Jenkins

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

As land area in grain crop production increases in the US Midwest, perennial pasture availability decreases but the demand increases. Matching the seasonal growth patterns of C₃ and C₄ plant species to grow forages that are complementary allows producers to fill production gaps in otherwise monoculture systems and possibly increase overall productivity. One way to fill the forage production gap of C₃ grass dominated pastures is by producing a warm-season, annual forage in a separate field. However, with continual reductions in land availability, this may not be an option. Using two studies, our objectives were to improve …

Combining Temperature-Dependent Life Table Data Into Insect Life Cycle Model To Forecast Fall Armyworm Spodoptera Frugiperda (Je Smith) Distribution In Maize Agro-Ecological Zones In Africa, Marian Adan, Henri E.Z. Tonnang, Cojdo E.F. Kassa, Klaus Greve, Christian Borgemeister, Georg Goergen

All Peer-Reviewed Publications

The fall armyworm (FAW), Spodoptera frugiperda (JE Smith) (Lepidoptera: Noctuidae), an invasive agricultural pest, has significantly impacted crop yields across Africa. This study investigated the relationship between temperature and FAW life history traits, employing life cycle modeling at temperatures of 20, 25, 28, 30, and 32̊C. The development time for eggs, larvae, and pupae varied from 0–3 days, 10–18 days, and 7–16 days, respectively. The optimal temperature range for immature stage survival and female fecundity was identified as 21–25̊C, with the intrinsic rate of increase (rm) and gross reproductive rate (GRR) peaking at 25–28̊C. Model validation confirmed the accuracy of …

Yield And Nutritive Quality Of Fresh And Ensiled Reduced Lignin Alfalfa In Monoculture And Diculture With Novel Tall Fescue, Morgan Boss

All Theses

The objectives of this research were to: (1) evaluate the yield, nutritional value, and digestibility of fresh and ensiled reduced lignin alfalfa (RLA; Medicago sativa L.) in monoculture and when mixed with novel endophyte-infected tall fescue (F; Festuca arundinacea) in comparison to a conventional alfalfa (CA) cultivar; and (2) evaluate ensiled samples under varying DM concentrations; with or without inoculant. A trial was prepared as a randomized complete block design with 4 replicates per treatment. Treatments included reduced lignin alfalfa (RLA), conventional alfalfa (CA) and tall fescue (F) plots as well as RLA/F and CA/F plots. Plots were harvested on …

Impact Of Plant Defenses And Aphid-Associated Microbes In Modulating Sorghum–Sugarcane Aphid Interactions, Edith Ikuze

Department of Entomology: Dissertations, Theses, and Student Research

Sorghum (Sorghum bicolor) is a vital cereal crop globally, facing challenges from invasive pests such as the sugarcane aphid (SCA; Melanaphis sacchari). To elucidate mechanisms of sorghum resistance to SCA, we examined the role of plant defenses and the influence of aphid-associated microbes in modulating sorghum defenses. Lignin is a complex heterogenous polymer present in nearly all plant cell walls that plays a critical role in protecting plants from various stresses. In this study, we investigated the role of the caffeoyl coenzyme-A O-methyltransferase (CCoAOMT), one of the core enzymes in monolignol biosynthesis pathway that leads to lignin …

Next-Generation Crop Monitoring Technologies: Case Studies About Edge Image Processing For Crop Monitoring And Soil Water Property Modeling Via Above-Ground Sensors, Nipuna Chamara

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Artificial Intelligence (AI) has advanced rapidly in the past two decades. Internet of Things (IoT) technology has advanced rapidly during the last decade. Merging these two technologies has immense potential in several industries, including agriculture.

We have identified several research gaps in utilizing IoT technology in agriculture. One problem was the digital divide between rural, unconnected, or limited connected areas and urban areas for utilizing images for decision-making, which has advanced with the growth of AI. Another area for improvement was the farmers' demotivation to use in-situ soil moisture sensors for irrigation decision-making due to inherited installation difficulties. As Nebraska …

What's In A Name? Plant Naming As Cultural Artifact And Story In The Midwestern United States, Sophie Wesseler

Undergraduate Theses

This project sought to collect and contextualize the historical and contemporary names given to plants by inhabitants of the Midwestern United States, understanding plant names as cultural artifacts that can offer insight into the communities in which they were created and evolved. Formatted as a series of entries, this collection gathered these names and contextualized them within other artifacts of cultural significance, such as art or poetry, and alongside historical research on their origins and cultural environments. Examining plant names through the fields of linguistics, semiology, anthropology, cultural studies, taxonomy, and ethnobotany, this work traces the names of various plants …

Identifying Grassland Cores In The Southeast: Relating Spatial Covariance To Avian Communities And Vegetation Structure, Lauren L. Berry

Graduate Theses and Dissertations

Globally, grasslands are declining in range, which is leading to a decline in grassland-dependent taxa. These declines can be attributed to a variety of issues, a major one being the encroachment of woody species into historic grasslands. There is a new framework for strategizing grassland management, referred to as “Defend the Core,” which calls for proactive management of intact grasslands, meaning conserving remaining grasslands by preventing woody encroachment in the first place. To successfully defend the core, it is imperative that we develop rapid methods to identify intact grassland cores for management priority. One method that can be used for …

Plant-Plant Interaction In Early- Vs. Late-Successional Varieties Of The Hawaiian Landscape-Dominant Tree, Metrosideros Polymorpha, Tomoko Sakishima

UNLV Theses, Dissertations, Professional Papers, and Capstones

Plant-plant interactions play an important role in assembling plant communities. Interactions between neighboring plants can vary as a result of the genetic relatedness of neighbors, impacting rates of growth and patterns of resource allocation. When growing alongside close relatives, some species decrease their growth in a form of cooperation, while others grow faster through facilitation. A complication of plant interaction studies arises because decreased growth in the presence of close relatives can also be due to competition for resources, which increases with phenotypic similarity. Further complicating matters, mycorrhizal fungi, through their connections with plant roots, may strongly influence plant interactions. …