Digital Commons Network^™

Isolates Of Uromyces Appendiculatus With Specific Virulence To Landraces Of Phaseolus Vulgaris Of Andean Origin, Craig M. Sandlin, James R. Steadman, Carlos M. Araya, Dermot P. Coyne

Department of Plant Pathology: Faculty Publications

Five isolates of the bean rust fungus Uromyces appendiculatus were shown to be specifically virulent on bean genotypes of Andean origin. This specificity was demonstrated by the virulence of five pairs of isolates on a differential set of 30 Phaseolus vulgaris landraces. Each isolate pair was from a different country in the Americas and consisted of one Andean-specific isolate and one nonspecific isolate. Of the differential P. vulgaris landraces, 15 were of Middle American origin and 15 were of Andean origin. The Andean-specific rust isolates were highly virulent on Andean landraces but not on landraces of Middle American origin. …

The Pseudomonas Syringae Pv. Tomato Hrpw Protein Has Domains Similar To Harpins And Pectate Lyases And Can Elicit The Plant Hypersensitive Response And Bind To Pectate, Amy O. Charkowski, James R. Alfano, Gail Preston, Jing Yuan, Sheng Yang He, Alan Collmer

Center for Plant Science Innovation: Faculty Publications

The host-specific plant pathogen Pseudomonas syringae elicits the hypersensitive response (HR) in nonhost plants and secretes the HrpZ harpin in culture via the Hrp (type III) secretion system. Previous genetic evidence suggested the existence of another harpin gene in the P. syringae genome. hrpW was found in a region adjacent to the hrp cluster in P. syringae pv. tomato DC3000. hrpW encodes a 42.9-kDa protein with domains resembling harpins and pectate lyases (Pels), respectively. HrpW has key properties of harpins. It is heat stable and glycine rich, lacks cysteine, is secreted by the Hrp system, and is able to elicit …

Interactions Between The Structural Domains Of The Rna Replication Proteins Of Plant-Infecting Rna Viruses, Erin K. O'Reilly, Zhaohui Wang, Roy C. French, C. Cheng Kao

Department of Plant Pathology: Faculty Publications

Brome mosaic virus (BMV), a positive-strand RNA virus, encodes two replication proteins: the 2a protein, which contains polymerase-like sequences, and the 1a protein, with N-terminal putative capping and C-terminal helicase-like sequences. These two proteins are part of a multisubunit complex which is necessary for viral RNA replication. We have previously shown that the yeast two-hybrid assay consistently duplicated results obtained from in vivo RNA replication assays and biochemical assays of protein-protein interaction, thus permitting the identification of additional interacting domains. We now map an interaction found to take place between two 1a proteins. Using previously characterized 1a mutants, a perfect …

A Sensitive Elisa For Pythium Ultimum Using Polyclonal And Species-Specific Monoclonal Antibodies, G. Y. Yuen, J. Q. Xia, C. L. Sutula

Department of Plant Pathology: Faculty Publications

A double-antibody sandwich indirect enzyme-linked immunosorbent assay (ELISA) was developed for the detection and quantification of Pythium ultimum. A polyclonal antibody produced to cell walls of P. ultimum was used as the capture antibody, while a P. ultimum-specific monoclonal antibody (MAb E5) was used for recognition of the fungus. In the ELISA, culture extracts of 7 isolates of P. ultimum exhibited strong positive reactions, whereas none of the 37 isolates of other Pythium spp. and fungal genera had positive reactions. P. ultimum was detected by ELISA in roots of bean, cabbage, and sugar beet seedlings grown in pathogen-infested …

Mutational Analysis Of Area, A Transcriptional Activator Mediating Nitrogen Metabolite Repression In Aspergillus Nidulans And A Member Of The “Streetwise” Gata Family Of Transcription Factors, Richard A. Wilson, Herbert N. Arst Jr.

Fungal Molecular Plant-Microbe Interactions

Details a mutational analysis of AREA, a transcriptional activator mediating nitrogen metabolite repression in Aspergillus nidulans and a member of the “streetwise” GATA family of transcription factors.

A Partial Host Range Of The High Plains Virus Of Corn And Wheat, Dallas L. Seifers, Tom L. Harvey, T. J. Martin, Stanley G. Jensen

Department of Plant Pathology: Faculty Publications

Barley (Hordeum vulgare), cheat (Bromus secalinus), corn (Zea mays), oat (Avena sativa), rye (Secale cereale), and wheat (Triticum aestivum) were infected by a Kansas isolate of the High Plains virus (HPV) in greenhouse experiments, but several other grass species were not. Infection of a host was dependent upon wheat curl mite numbers. Although both green foxtail (Setaria viridis) and yellow foxtail (S. glauca) are found naturally infected by HPV, only yellow foxtail could be infected in greenhouse experiments. Field sampling (1994 to 1996) of …

Phylogenetic Relationships Within The Family Potyviridae: Wheat Streak Mosaic Virus And Brome Streak Mosaic Virus Are Not Members Of The Genus Rymovirus, Drake C. Stenger, Jeffrey S. Hall, Il-Ryong Choi, Roy C. French

Department of Plant Pathology: Faculty Publications

The complete nucleotide sequence of wheat streak mosaic virus (WSMV) has been determined based on complementary DNA clones derived from the 9,384-nucleotide (nt) RNA of the virus. The genome of WSMV has a 130-nt 5&#;&#;leader and 149-nt 3&#;-untranslated region and is polyadenylated at the 3&#;&#;end. WSMV RNA encodes a single polyprotein of 3,035 amino acid residues and has a deduced genome organization typical for a member of the family Potyviridae (5&#;-P1/HC-Pro/P3/6K1/CI/6K2/VPg-NIa/NIb/CP-3&#;). Because WSMV shares with ryegrass mosaic virus (RGMV) the biological property of transmission by eriophyid mites, WSMV has been assigned to the genus Rymovirus, of which RGMV is …

Expression Of Human Lactoferrin Cdna Confers Resistance To Ralstonia Solanacearum In Transgenic Tobacco Plants, Zhanyuan Zhang, Dermot P. Coyne, Anne K. Vidaver, Amitava Mitra

Department of Plant Pathology: Faculty Publications

A construct containing a human lactoferrin cDNA was used to transform tobacco (Nicotiana tabacum) using an Agrobacterium-mediated DNA-transfer system to express this human protein in transgenic plants. Transformants were analyzed by Southern, Northern, and Western blots to determine integration of the cDNA into the plant genome and lactoferrin gene expression levels. Most transgenic plants demonstrated significant delays of bacterial wilt symptoms when inoculated with the bacterial pathogen Ralstonia solanacearum. Quantification of the expressed lactoferrin protein by enzyme-linked immunosorbent assay in transgenic plants indicated a significant positive relationship between lactoferrin gene expression levels and levels of disease …

Physiologic Specialization Of Puccinia Recondita F. Sp. Tritici In Nebraska During 1995 And 1996, J. E. Watkins, S. S. Rutledge, P. Stephen Baenziger, W. Youngquist

Department of Plant Pathology: Faculty Publications

Field samples of Puccinia recondita f. sp. tritici, collected from four wheat-growing regions in Nebraska in 1995 and from three in 1996, were characterized for virulence. Twenty virulence phenotypes were identified in 1995 and 18 in 1996. Virulence phenotypes MBR-10,18 (virulent on Lr genes, 1, 3, 3ka, 10, 11, 18, and 30) and MDR-10,18 (virulent on Lr genes 1, 3, 3ka, 10, 11, 18, 24, and 30) were the most prevalent, with each phenotype comprising 21.6% of the isolates characterized in 1995. Of the 1995 isolates, 24% were virulent on 10 or more host genes. No virulence to Lr16 and …

Polymerase Chain Reaction Detection And Phylogenetic Characterization Of An Agent Associated With Yellow Vine Disease Of Cucurbits, Francisco J. Avila, Benny D. Bruton, Jacqueline Fletcher, J. L. Sherwood, Sam D. Pair, Ulrich Melcher

Department of Plant Pathology: Faculty Publications

Diagnosis of yellow vine disease (YVD) in cucurbits, an important disease in the south-central United States, relies on external symptom appearance, phloem discoloration, and the presence of bacterium-like organisms (BLOs) in phloem. Polymerase chain reaction (PCR) amplification of BLO nucleotide sequences was explored as a means to improve diagnostic techniques. PCR, using a primer pair based on sequences of the citrus-greening BLO, amplified a 0.15-kilobase (kb) fragment from the DNA of symptomatic plants, but not from that of asymptomatic plants. Its nucleotide sequence suggested that the DNA amplified was of prokaryotic origin. A primer pair, designed to amplify nonspecific prokaryotic …

Studies On The Biology Of Striga Aspera (Scrophulariaceae) In Nigeria, Emmanuel Izaka Aigbokhan

Biological Sciences Theses & Dissertations

Studies on Striga aspera are few and little information exists on its relationship with the morphologically similar and much studied S. hermonthica. Both species are sympatric in West Africa and if they hybridize, may serve as virulent gene reservoirs for each other.

The primary focus of this study was on the biology of S. aspera in Nigeria. The research focussed on its distribution, phenology, cytology, hybridization, seed dormancy, viability and germination in relation to S. hermonthica. Related studies involving the hybrids include genetic and morphological variability, pathogenicity and the simultaneous dual infection of a maize plant by both species.

In …

Managing Spring Dead Spot Of Bermudagrass, Paul C. Vincelli, David Williams

Agriculture and Natural Resources Publications

Spring dead spot is the most destructive disease of bermudagrass in Kentucky. The most serious outbreaks occur under high maintenance conditions; e.g., high nitrogen fertility, low mowing height, and frequent traffic. Moderate to severe outbreaks can occur under low-maintenance conditions as well.

High levels of resistance to spring dead spot in bermudagrass varieties have not yet been demonstrated experimentally. Limited data suggest that those varieties with best winter hardiness are somewhat less susceptible to the disease. To date, no confirmed cases of spring dead spot have been documented in “Quickstand” bermudagrass, which may indicate that this variety will suffer less …

Lindsay M. Black, 1907 To 1997, Myron K. Brakke, D. V. R. Reddy

Department of Plant Pathology: Faculty Publications

Plant pathology and virology lost a pioneer when Lindsay MacLeod Black died on 23 December 1997. We lost a friend and mentor. Black was noted for proving conclusively that a plant virus can multiply in both leafhopper vectors and plants; characterizing unstable, leafhopper-transmitted viruses; and developing insect tissue cultures for studying plant viruses.

Management Of Red Squirrel Feeding Damage To Lodgepole Pine By Stand Density Manipulation And Diversionary Food, Thomas P. Sullivan

Vertebrate Pest Conference Proceedings: 18th (1998)

The red squirrel (Tamiasciurus hudsonicus) feeds on the vascular tissues of sapling lodgepole pine (Pinus contorta) during spring periods in forests of interior British Columbia and Alberta, Canada. This damage may lead to mortality and reduced growth of crop trees in managed stands. Manipulation of stand density by pre-commercial thinning to densities < 1,000 stems/ha is an effective method to lower squirrel populations and feeding damage. Lowering stand density enhances the growth of crop trees, and understory herbs and shrubs as wildlife habitat, while protecting trees from squirrel feeding. This approach has been successful in several forest ecological zones. An alternative management tool is provision of diversionary food (sunflower seed) for those stands susceptible to feeding damage, and where stand thinning has already been completed. Diversionary food can be applied aerially and is very cost effective for protecting managed stands. These techniques may be used to maintain or even enhance species diversity of small mammal communities in those forest stands requiring protection.

Characterization Of The Large (L) Rna Of Peanut Bud Necrosis Tospovirus, S. Gowda, Satyanarayana Tatineni, R. A. Naidu, A. Mushegian, W. O. Dawson, D. V. R. Reddy

Department of Plant Pathology: Faculty Publications

The nucleocapsids purified from peanut plants systemically infected with peanut bud necrosis virus (PBNV), a member of the genus Tospovirus, contained both viral(v) and viral complementary(vc) sense L RNAs. Defective forms of L RNA containing ‘core polymerase region’ were observed. The full length L RNA of PBNV was sequenced using overlapping cDNA clones. The 8911 nucleotide L RNA contains a single open reading frame (ORF) in the vc strand, and encodes a protein of 330 kDa. At the 50 and 30 termini of the v sense RNA there were 247 and 32 nt untranslated regions, respectively, containing an 18 …

Northern Australia Quarantine Strategy. Weeds Target List, B. M. Waterhouse, A A. Mitchell

Biosecurity published reports

Second edition.

The Northern Australia Quarantine Strategy (NAQS) was established in 1989 as an outcome of a major evaluation of quarantine in Australia (AGPS 1987, 1988). NAQS activities include surveying for weeds,insect pests and diseases of plants; and pests and diseases of animals in northern Australia, Papua New Guinea and Indonesia. The primary goal is to provide early detection and warning of new quarantine threats or incursions.

A targetted approach was adopted for all pests, diseases and weeds. For each category of pest, experts in the discipline compiled lists of organisms not known from Australia but known to occur in …

A Phylogenetic Analysis Of Heterorhabditis (Nemata: Rhabditidae) Based On Internal Transcribed Spacer 1 Dna Sequence Data, B. J. Adams, A. M. Burnell, Thomas O. Powers

Department of Plant Pathology: Faculty Publications

Internal transcribed spacer 1 sequences were used to infer phylogenetic relationships among 8 of the 9 described species and one putative species of the entomopathogenic nematode genus Heterorhabditis. Sequences were aligned and optimized based on pairwise genetic distance and parsimony criteria and subjected to a variety of sequence alignment parameters. Phylogenetic trees were constructed with maximum parsimony, cladistic, distance, and maximum likelihood algorithms. Our results gave strong support for four pairs of sister species, while relationships between these pairs also were resolved but less well supported. The ITS1 region of the nuclear ribosomal repeat was a reliable source of …

Peanut Yellow Spot Virus Is A Member Of A New Serogroup Of Tospovirus Genus Based On Small (S) Rna Sequence And Organization, Satyanarayana Tatineni, S. Gowda, K. Lakshminarayana Reddy, S. E. Mitchell, W. O. Dawson, D. V. R. Reddy

Department of Plant Pathology: Faculty Publications

Peanut yellow spot virus (PYSV) represents a distinct tospovirus species based on serology and nucleic acid hybridization. The sequence of the S RNA was 2 970 nucleotides with 22 nucleotide long inverted repeats (with three mismatches) at the termini. The coding was ambisense with a long open reading frame (ORF) in each strand. The 5'-large ORF (1 440 nucleotides in the viral sense (v) strand) encoded a protein with a predicted size of 53.2 kDa that was identified as the nonstructural (NSs) protein based on 16–21% sequence identity and 42– 48% sequence similarity with other tospoviruses. A 3' ORF (741 …

Hyaluronan Synthase Of Chlorella Virus Pbcv-1, Paul L. Deangelis, Wei Jing, Michael V. Graves, Dwight E. Burbank, James L. Van Etten

Department of Plant Pathology: Faculty Publications

Sequence analysis of the 330-kilobase genome of the virus PBCV-1 that infects a chlorella-like green algae revealed an open reading frame, A98R, with similarity to several hyaluronan synthases. Hyaluronan is an essential polysaccharide found in higher animals as well as in a few pathogenic bacteria. Expression of the A98R gene product in Escherichia coli indicated that the recombinant protein is an authentic hyaluronan synthase. A98R is expressed early in PBCV-1 infection and hyaluronan is produced in infected algae. These results demonstrate that a virus can encode an enzyme capable of synthesizing a carbohydrate polymer and that hyaluronan exists outside of …

Identification Of The Wheat Curl Mite As The Vector Of The High Plains Virus Of Corn And Wheat, Dallas L. Seifers, Tom L. Harvey, T. J. Martin, Stanley G. Jensen

Department of Plant Pathology: Faculty Publications

Wheat with virus-like symptoms (extracts containing a 33-kDa protein in sodium dodecyl sulfate- polyacrylamide gel electrophoresis, negative in enzyme-linked immunosorbent assay to wheat streak mosaic virus, and not infectious in a backassay to other wheat) reacted positively to antiserum made against a protein purified from symptomatic corn infected with the High Plains virus (HPV), indicating a serological relationship between the corn and wheat pathogens. The wheat curl mite (WCM, Aceria tosichella Keifer) was identified as the vector of the virus and caused persistent infection of barley (Hordeum vulgare L.) and wheat (Triticum aestivum L.) in greenhouse experiments. The …

Characteristics Of Beet Soilborne Mosaic Virus, A Furo-Like Virus Infecting Sugar Beet, G.B. Heidel, C.M. Rush, T.L. Kendall, S.A. Lommel, Roy C. French

Department of Plant Pathology: Faculty Publications

Beet soilborne mosaic virus (BSBMV) is a rigid rod-shaped virus transmitted by Polymyxa betae. Particles were 19 nm wide and ranged from 50 to over 400 nm, but no consistent modal lengths could be determined. Nucleic acids extracted from virions were polyadenylated and typically separated into three or four discrete bands of variable size by agarose-formaldehyde gel electrophoresis. RNA 1 and 2, the largest of the RNAs, consistently averaged 6.7 and 4.6 kb, respectively. The sizes and number of smaller RNA species were variable. The molecular mass of the capsid protein of BSBMV was estimated to be 22.5 kDa. …

The Aspergillus Nidulans Sepa Gene Encodes An Fh1/2 Protein Involved In Cytokinesis And The Maintenance Of Cellular Polarity, Steven D. Harris, Lisbeth Hamer, Kathryn E. Sharpless, John E. Hamer

Department of Plant Pathology: Faculty Publications

Cytokinesis (septation) in the fungus Aspergillus nidulans occurs through the formation of a transient actin ring at the incipient division site. Temperature-sensitive mutations in the sepA gene prevent septation and cause defects in the maintenance of cellular polarity, without affecting growth and nuclear division. The sepA gene encodes a member of the growing family of FH1/2 proteins, which appear to have roles in morphogenesis and cytokinesis in organisms such as yeast and Drosophila Results from temperature shift and immunofluorescence microscopy experiments strongly suggest that sepA function requires a preceding mitosis and that sepA acts prior to actin ring formation. Deletion …

United States Patent, Number: 5,633,447: Plant Tissue Comprising A Subgenomic Promoter, Paul G. Ahlquist, Roy C. French

Department of Plant Pathology: Faculty Publications

A subgenomic promoter of a positive strand RNA virus is disclosed which directs the amplified expression of a structural gene in plant tissue. The core region and an upstream activating domain of the subgenomic promoter are identified. This promoter can be utilized in a modified virus. or in an appropriate engineered recombinant DNA derivative which may be chromosomally integrated or maintained as an episome in transformed cells.

Comparison Of Avrd Alleles From Pseudomonas Syringae Pv. Glycinea, Lisa Wolfson Keith, Carol Boyd, Noel T. Keen, J. E. Patridge

Department of Plant Pathology: Faculty Publications

Avirulence gene D alleles resided on indigenous plasmids in races 0, 2, 3, 4, 5, and 6 of Pseudomonas syringae pv. glycinea (Psg), but the allele in race 1 appeared to be chromosomal. These were all nonfunctional avirulence genes because they neither induced the avirulence phenotype on Rpg4 soybean cultivars nor directed the production of syringolide elicitors when expressed in Escherichia coli cells. The predicted proteins encoded by the seven Psg avrD genes were very similar to that of a functional class II allele from P. syringae pv. phaseolicola G50 race 2, but contained mutations collectively …

Chlorella Virus Pbcv-1 Encodes A Homolog Of The Bacteriophage T4 Uv Damage Repair Gene Denv, Masakazu Furuta, John Schrader, Holly Schrader, Tyler Kokjohn, Simon Nyaga, Amanda Mccullough, R. Stephen Lloyd, Dwight Burbank, Dorit Landstein, Leslie C. Lane, James L. Van Etten

Department of Plant Pathology: Faculty Publications

The bacteriophage T4 denV gene encodes a well-characterized DNA repair enzyme involved in pyrimidine photodimer excision. We have discovered the first homologs of the denV gene in chlorella viruses, which are common in fresh water. This gene functions in vivo and also when cloned in Escherichia coli. Photo-damaged virus DNA can also be photoreactivated by the host chlorella. Since the chlorella viruses are continually exposed to solar radiation in their native environments, two separate DNA repair systems, one that functions in the dark and one that functions in the light, significantly enhance their survival.

Characterization Of An Atp-Dependent Dna Ligase Encoded By Chlorella Virus Pbcv-1, C. Kiong Ho, James L. Van Etten, Stewart Shuman

Department of Plant Pathology: Faculty Publications

We report that Chlorella virus PBCV-1 encodes a 298-amino-acid ATP-dependent DNA ligase. The PBCV-1 enzyme is the smallest member of the covalent nucleotidyl transferase superfamily, which includes the ATP-dependent polynucleotide ligases and the GTP-dependent RNA capping enzymes. The specificity of PBCV-1 DNA ligase was investigated by using purified recombinant protein. The enzyme catalyzed efficient strand joining on a singly nicked DNA in the presence of magnesium and ATP (K_m, 75 μM). Other nucleoside triphosphates or deoxynucleoside triphosphates could not substitute for ATP. PBCV-1 ligase was unable to ligate across a 2-nucleotide gap and ligated poorly across a 1-nucleotide …

United States Patent , Number: 5,602,242: Hybrid Rna Virus, Paul G. Ahlquist, Roy C. French, Robert F. Sacher

Department of Plant Pathology: Faculty Publications

A recombinant RNA virus is provided allowing encapsidation of genetically engineered viral sequences in heterologous, preferably rod-shaped coat, protein capsids. Since icosahedral viruses are limited in the amount of RNA they can carry, and rod-shaped viruses are expansible, this invention allows the size of recombinant virus RNA components to be increased (or decreased). Methods of making and using such recombinant viruses are also provided, specifically with respect to the transfection of plants to bring about genotypic and phenotypic changes.

Genetic Variability Among Maize Inbred Lines For Resistance To The High Plains Virus–Wheat Streak Mosaic Virus Complex, A. Marçon, S. M. Kaeppler, S. G. Jensen

Department of Plant Pathology: Faculty Publications

High plains virus (HPV) is a pathogen that causes a severe disease, especially in susceptible corn genotypes. The virus is transmitted by the eriophyid mite Aceria tosichella, which also transmits wheat streak mosaic virus (WSMV). This often results in a mixed infection by these two viruses. Genetic variability for resistance to the HPV exists among maize inbred lines but has not been characterized. The disease reaction of 30 maize inbred lines to the mixed infection and to WSMV alone was characterized in this study. Evaluation was based on symptom expression and virus titer (HPV and WSMV), as measured by …

Identification Of Cyst Nematodes Of Agronomic And Regulatory Concern With Pcr-Rflp Of Its1, Allen L. Szalanski, Dezhi D. Sui, T. S. Harris, Thomas O. Powers

Department of Plant Pathology: Faculty Publications

The first internally transcribed spacer region (ITS1) from cyst nematode species (Heteroderidae) was compared by nuc.leotide sequencing and PCR-RFLP. European, Asian, and North American isolates of five heterodefid species were examined to assess intraspecific variation. PCR-RFLP patterns of amplified ITS1 DNA from pea cyst nematode, Heterodera goettingiana, from Northern Ireland were identical with patterns from Washington State. Sequencing demonstrated that ITS1 heterogeneity existed within individuals and between isolates, but did not result in different restriction patterns. Three Indian and two U.S. isolates of the corn cyst nematode, Heterodera zeae, were compared. Sequencing detected variation among ITS1 clones from …

The Rdna Internal Transcribed Spacer Region As A Taxonomic Marker For Nematodes, Thomas O. Powers, T. C. Todd, A. M. Burnell, P. C. B. Murray, C. C. Flemming, Allen L. Szalanski, B. A. Adams, T. S. Harris

Department of Plant Pathology: Faculty Publications

The ITS region from a wide taxonomic range of nematodes, including secernentean and adenophorean taxa, and free-living, entomopathogenic, and plant-parasitic species, was evaluated as a taxonomic marker. Size of the amplified product aided in the initial determination of group membership, and also suggested groups that may require taxonomic reevaluation. Congeneric species often displayed identically sized ITS regions, but genera such as Pratylenchus and Tylenchorhynchus had species with large differences in size. ITS heterogeneity in individuals and populations was identified in several nematode taxa. PCR-RFLP of ITS1 is advocated as a method of taxonomic analysis in genera such as Helicotylenchus that …