Digital Commons Network^™

Non-Destructive Imaging Of Phytosulfokine Trafficking In Plants Using Fiber-Optic Fluorescence Microscopy, Bernard Abakah

Electronic Theses and Dissertations

Plants secrete peptide ligands and use receptor signaling to respond to stress and control development. Understanding these phenomena is key to improving plant health and productivity for food, fiber, and energy applications. Phytosulfokine (PSK), a sulfated peptide hormone, regulates plant cell division, growth, and stress tolerance via specific phytosulfokine receptors (PSKRs). This study uses fiber-optic fluorescence microscopy to elucidate trafficking of PSK in live plants. The microscope features two-color optics and an objective lens connected to a 1-m coherent imaging fiber mounted on either a conventional upright microscope body or 5-axis positioning system (X–Y–Z plus pitch and yaw). PSK and …

The Nature Of Lobal Qsos. Ii. Hst/Wfc3 Observations Reveal Host Galaxies Dominated By Mergers, Mariana S. Lazarova, Gabriela Canalizo, Mark Lacy, Wyatt Behn, Kaitlyn Raub, Vardha N. Bennert, Duncan Farrah

Physics

Low-ionization broad absorption line QSOs (LoBALs) are suspected to be merging systems in which extreme, active galactic nucleus-driven outflows have been triggered. Whether or not LoBALs are uniquely associated with mergers, however, has yet to be established. To characterize the morphologies of LoBALs, we present the first high-resolution morphological analysis of a volume-limited sample of 22 Sloan Digital Sky Survey (SDSS)-selected LoBALs at 0.5 < z < 0.6 from Hubble Space Telescope Wide Field Camera 3 observations. Host galaxies are resolved in 86% of the systems in F125W, which is sensitive to old stellar populations, while only 18% are detected in F475W, which traces young, unobscured stellar populations. Signs of recent or ongoing tidal interaction are present in 45%–64% of the hosts, including double nuclei, tidal tails, bridges, plumes, shells, and extended debris. Ongoing interaction with a companion is apparent in 27%−41% of the LoBALs, with as much as 1/3 of the sample representing late-stage mergers at projected nuclear separations <10 kpc. Detailed surface brightness modeling indicates that 41% of the hosts are bulge dominated while only 18% are disks. We discuss trends in various properties as a function of merger stage and parametric morphology. Notably, mergers are associated with slower, dustier winds than those seen in undisturbed/unresolved hosts. Our results favor an evolutionary scenario in which quasar-level accretion during various merger stages is associated with the observed outflows in low-z LoBALs. We discuss differences between LoBALs and FeLoBALs and show that selection via the traditional balnicity index would have excluded all but one of the mergers.

Microscopic And Spectroscopic Analysis Of Nordihydroguaiaretic Acid Effect On Astrocytes, Lizbeth Vanessa Martinez Lopez

Open Access Theses & Dissertations

Astrocytes, one of the most abundant cell components in the central nervous system (CNS), have been a research target in the last few years. Several studies have found that astrocytes are not only mere supporters of neurons but also of essential processes developed in the CNS. Their malfunction could induce neurodegenerative diseases and brain tumors. Thus, further understanding of astrocytes and their role is of high interest to develop possible new treatments and methods of disease diagnosis, especially in brain cancer. The plant Larrea tridentata (La Gobernadora in Mexico or Creosote bush in the United States) is known to have …

Light Scattering From Periodic, Conducting Nanostructures, Wesley Kenneth Mills

Undergraduate Honors Capstone Projects

A material with broadband light absorbing capabilities has the potential for much usefulness in devices such as photovoltaics and thermoelectrics. By energy conservation, a non-transparent material with low reflectance will be highly absorbing. Thus, much research has been devoted to understanding what makes material having low reflectance across a wide wavelength spectrum.

The importance of a material’s electronic structure in determining reflectance is well-established. Current research is revealing the additional importance of surface architecture in the reflective properties of a material. A metasurface is a two-dimentional material with physical features at or smaller than the wavelength of light considered. These …

Analysis Of The Electrostatic Characteristics Of The Zika Virus Capsid Using Computational Methods, Cassandra Guadalupe Del Rio De Avila

Open Access Theses & Dissertations

Zika virus (ZIKV) is a flavivirus that is usually transmitted through the bite of infected mosquitoes. This virus can cause a variety of neurological disorders, the most common being Guillain-Barré syndrome in adults. Moreover, it is of great concern in pregnant women, since can cause deformities in the brain and other organs of newborns.Studying the structural characteristics of the virus during its mature and infectious phase can provide crucial information on the mechanisms by which it enters and replicates within host cells, as well as its evolution, transmission, and interaction with other living organisms. The symmetric pattern present in the …

Methods For Preparing And Characterizing Granular Materials For Electron Yield Measurements, Tom Keaton

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

This work presents a systematic study on sample preparation methods and accuracy of electron yield (EY) measurements of highly insulating, granular materials. EY measurements of highly insulating materials, especially those with high EY, are challenging due to the effects of sample charging even for very low fluence electron probe beams. EY measurements of particulates are complicated by: (i) roughness effects from particulate size, shape, coverage, and compactness; (ii) particle adhesion; (iii) substrate contributions; and (iv) electrostatic repulsion and potential barriers from charged particles and substrates. Numerous methods were explored to rigidly affix particles on conducting substrates at varying coverages for …

Development Of Multi-Configuration Methods On Density Functional Theory Orbitals And Application On The Study Of Dimers, Jose Gustavo Bravo Flores

Open Access Theses & Dissertations

The configuration interaction (CI) methods is an exact method to solve the non relativistic Schrodinger equation, describing the wave function as a linear combination of Slater determinants. Because the computation time grows factorially as the number of electrons, CI is mostly used for relatively small systems. Density functional theory (DFT) rose as one of the most used methods for computational quantum chemistry in the last 30 years. DFT can describe a system's properties with the electron density, which only depends of of three coordinates. Due to its low computational costs it allows one to study bigger systems than CI, however …

A Classification Of Tensors In Ecsk Theory, Joshua James Leiter

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

You might have heard of Einstein’s theory of General relativity (GR): it is the one where mass and energy curve the fabric of spacetime to create gravity. This is the major theory which allows communication through satellites and our GPS to work too! Wormholes have interested me, but there are some issues about forming them in GR. Interestingly enough, elementary particles are also characterized by their spin in the standard model. However, intrinsic spin is nowhere geometrically coupled to the geometry of spacetime in Einstein’s theory. Later, Élie Cartan, Dennis Sciama, and Tom Kibble all flushed out adding different aspects …

Asymptotic Properties And Separation Rates For Navier-Stokes Flows, Patrick Michael Phelps

Graduate Theses and Dissertations

In this dissertation, we investigate asymptotic properties of local energy solutions to the Navier-Stokes equations and develop an application which controls the separation of non-unique solutions in this class. Specifically, we quantify the rate at which two, possibly unique solutions evolving from the same data may separate pointwise away from a singularity. This is motivated by recent results on non-uniqueness for forced and unforced Navier-Stokes and analytical and numerical evidence suggesting non-uniqueness in the Leray class. Our investigation begins with discretely self-similar solutions known to exist globally in time and to be regular outside a space-time paraboloid. We prove decay …

Understanding And Tuning Magnetism In Van Der Waals Magnetic Compounds, Rabindra Basnet

Graduate Theses and Dissertations

The recently discovered two-dimensional (2D) magnetism has attracted intensive attention due to possible magnetic phenomenon arising from 2D magnetism and their promising potential for spintronics applications. The advances in 2D magnetism have motivated the study of layered magnetic materials, and further enhanced our ability to tune their magnetic properties. Among various layered magnets, tunable magnetism has been widely investigated in metal thiophosphates MPX3. It is a class of magnetic van der Waals (vdW) materials with antiferromagnetic ordering persisting down to atomically thin limit. Their magnetism originates from the localized moments due to 3d electrons in transition metal ions. So, their …

Simulating Radial Ring Structure With An Ambipolar Elsasser (Am) Bump In Non-Ideal Magnetohydrodynamics Of Protoplanetary Disks, Aleksey S. Mohov

UNLV Theses, Dissertations, Professional Papers, and Capstones

Rings are one of the most ubiquitous substructures observed in protoplanetary disks. They are known to be a robust site for planetesimal formation; thus we look for mechanisms that can originate stable rings. From chemical modelling of snow lines, we expect a bump in the Ambipolar Diffusion (AD) Elssaser number (Am) in the radial direction. We use the Athena++ code to model the non-ideal Magentohydrodynamics (MHD) behavior of an Am bump. We explore a parameter space of Gaussian bumps with Am = 5, 1, 0.5 peak strength and σ = 0.25, 1, 5. The Gaussian profile is inserted into the …

Response Of The Isothermal Mode Grüneisen Tensor Across Phase Boundaries, Jasmine K. Hinton

UNLV Theses, Dissertations, Professional Papers, and Capstones

The assumptions for the 1912 Grüneisen parameter are reviewed, particularly in the cases of anisotropy, high temperatures, and across phase boundaries. Two main case studies are shown: β-Sn, and Cd. The main techniques of this work involve resistively heated diamond anvil cells with both optical Raman spectroscopy and x-ray diffraction. It is found in Sn that the isothermal mode Grüneisen tensor along increasing isotherms diverges from the single-valued temperature aggregate at the onset of melt, and this is proposed to use as a method of exploring melt phase boundaries in other systems. This method is examined once again on another …

Studies Of The Ionosphere-Thermosphere Responses To Multi-Scale Energy Deposition Processes, Haonan Wu

All Dissertations

The Ionosphere-Thermosphere (I-T) system is greatly affected by the magnetospheric energy deposition from above and subjected to forcing from the lower atmosphere simultaneously. A central problem in studying the coupled I-T system is to analyze the multi-scale processes naturally embedded in both ways. Magnetospheric energy input such as auroral precipitation and electric field demonstrates multi-scale structures during magnetic storms, resulting in multi-scale I-T responses when deposited into the I-T system. To better quantify the multi-scale aurora and electric field, we developed a new data assimilation model based on a multi-resolution Gaussian process model to synthesize empirical models and observational data …

Designing Noncentrosymmetric Multifunctional Materials, Ebube Oyeka

All Dissertations

Noncentrosymmetric (NCS) materials with crystal lattices lacking spatial inversion symmetry display a wide range of exciting functionalities. This dissertation covers two classes of functional NCS materials: magnetic skyrmion-host compounds and multifunctional materials. Magnetic skyrmion and multifunctional materials combining optical and magnetic responses are providing avenues for developing and optimizing the performance of electronic devices that can have uses in memory storage, laser technology, medicine, sensors, etc. The formation of skyrmions is driven by asymmetric Dzyaloshinskii–Moriya (DM) interaction facilitated by broken spatial inversion symmetry and large spin-orbit coupling (SOC), while multiple functionalities arise when spin carriers and optical chromophores are optimally …

The Search For Heavily Obscured Active Galactic Nuclei In The Local Universe, Ross Silver

All Dissertations

Active galactic nuclei (AGN) are supermassive black holes (SMBHs) in the center of galaxies that accrete surrounding gas and emit across the entire electromagnetic spectrum. They are the most energetic persistent emitters in the Universe, capable of outshining their host galaxies despite their emission originating from a region smaller than our Solar System. AGN were some of the first sources discovered that helped teach us that there were galaxies outside of our own, and they proved the existence of black holes. Moreover, AGN can give us valuable insights into other branches of astrophysics. For example, they can be used to …

Machine Learning-Based Data And Model Driven Bayesian Uncertanity Quantification Of Inverse Problems For Suspended Non-Structural System, Zhiyuan Qin

All Dissertations

Inverse problems involve extracting the internal structure of a physical system from noisy measurement data. In many fields, the Bayesian inference is used to address the ill-conditioned nature of the inverse problem by incorporating prior information through an initial distribution. In the nonparametric Bayesian framework, surrogate models such as Gaussian Processes or Deep Neural Networks are used as flexible and effective probabilistic modeling tools to overcome the high-dimensional curse and reduce computational costs. In practical systems and computer models, uncertainties can be addressed through parameter calibration, sensitivity analysis, and uncertainty quantification, leading to improved reliability and robustness of decision and …

Another Shipment Of Six Short-Period Giant Planets From Tess, Joseph E. Rodriguez, Samuel N. Quinn, Andrew Vanderburg, George Zhou, Jason D. Eastman, Erica Thygesen, Bryson Cale, David R. Ciardi, Phillip A. Reed, Ryan J. Oelkers

Physics & Astronomy Faculty Publications

We present the discovery and characterization of six short-period, transiting giant planets from NASA’s Transiting Exoplanet Survey Satellite (TESS) -- TOI-1811 (TIC 376524552), TOI-2025 (TIC 394050135), TOI-2145 (TIC 88992642), TOI-2152 (TIC 395393265), TOI-2154 (TIC 428787891), and TOI-2497 (TIC 97568467). All six planets orbit bright host stars (8.9 <G < 11.8, 7.7 <K < 10.1). Using a combination of time-series photometric and spectroscopic follow-up observations from the TESS Follow-up Observing Program Working Group, we have determined that the planets are Jovian-sized (R_P = 0.99--1.45 R_J), have masses ranging from 0.92 to 5.26 M_J, and orbit F, G, and K stars (4766 ≤ T_eff ≤ 7360 K). We detect a significant orbital …

Measurements Of Magnetic Field Penetration Of Materials For Superconducting Radiofrequency Cavities, Iresha Harshani Senevirathne

Physics Theses & Dissertations

Superconducting Radio Frequency (SRF) cavities used in particle accelerators are typically formed from or coated with superconducting materials. Currently high purity niobium is the material of choice for SRF cavities which have been optimized to operate near their theoretical field limits. This brings about the need for significant R&D efforts to develop next generation superconducting materials which could outperform Nb and keep up with the demands of new accelerator facilities. To achieve high quality factors and accelerating gradients, the cavity material should be able to remain in the superconducting Meissner state under high RF magnetic field without penetration of quantized …

Spectra Of Atmospheric And Astronomical Molecules, W. D. Cameron

Physics Theses & Dissertations

Spectroscopy techniques are focused on spectra of molecules of interest to the Earth’s atmosphere and/or astronomy and astrophysics. Laboratory spectroscopy as well as remote satellite sensing are applied. Using the Fourier transform spectrometer aboard the Atmospheric Chemistry Experiment (ACE) satellite to measure the absorption spectra of the Earth’s atmosphere through solar occultation limb observation demonstrates that volcanic eruption plumes can be located and tracked through their SO₂ content. The presence of those plumes is corroborated by overlaying infrared atmospheric aerosol extinction observed by the 1 μm imager on the same satellite. Tracking atmospheric aerosol movement with the ACE …

Nb3Sn Coating Of Twin Axis Cavity And Other Complex Srf Cavity Structures, Jayendrika Kumari Tiskumara

Physics Theses & Dissertations

In the field of Accelerator Science, for the low cost and increased quality factor, thin films coated niobium cavities are used in the modern SRF research. Within the potential substances, Nb₃Sn has shown higher critical temperature than niobium. Here the tin vapor diffusion method is used as the preferred technique to coat niobium cavities. So far, only elliptical cavities have been coated with Nb₃Sn and this technique has not yet been applied to cavities with complex geometries, which are also helpful in the accelerator science field. The Half-wave resonator could provide us data across frequencies of …

Design And Construction Of A Longitudinally Polarized Solid Nuclear Target For Clas12, Victoria Lagerquist

Physics Theses & Dissertations

A new polarized nuclear target has been developed, constructed, and deployed at Jefferson Laboratory in Newport News, VA for use with the upgraded 12 GeV CEBAF (Continuous Electron Beam Accelerator Facility) accelerator and the Hall B CLAS12 (12 GeV CEBAF Large Acceptance Spectrometer) detector array. This ‘APOLLO’ (Ammonia POLarized LOngitudinally) target is a longitudinally polarized, solid ammonia, nuclear target which employs DNP (Dynamic Nuclear Polarization) to induce a net polarization in samples of protons (NH3) and deuterons (ND3) cooled to 1K via helium evaporation, held in a 5T polarizing field supplied by the CLAS12 spectrometer, and irradiated with 140 GHz …

Exploring The Dependence Of Bulges In Spiral Galaxies On Their Environment, William Jackson Clark

Physics Theses & Dissertations

Recent research has shown a relationship between spiral galaxy satellite populations and the size of spiral bulges. The modern cosmological model of our universe (ΛCDM), does not predict this. Instead, ΛCMD predicts that only the total dynamical mass of a host galaxy should be correlated with satellite populations. We investigate this relationship in regimes other than satellites. In this study we compare the bulge to total mass ratios of spiral galaxies to the number of nearby galaxies within “n” Mpc. We use four papers from literature that calculate bulge to total mass ratios of 189 spiral galaxies using …

Search For Photons Above 1019ev With The Surface Detector Of The Pierre Auger Observatory, P. Abreu, M. Aglietta, I. Allekotte, K. Almeida Cheminant, A. Almela, J. Alvarez-Muñiz, B. Fick, D. Nitz, I. Norwood, A. Puyleart, Et Al.

Michigan Tech Publications, Part 1

We use the surface detector of the Pierre Auger Observatory to search for air showers initiated by photons with an energy above 1019 eV. Photons in the zenith angle range from 30° to 60° can be identified in the overwhelming background of showers initiated by charged cosmic rays through the broader time structure of the signals induced in the water-Cherenkov detectors of the array and the steeper lateral distribution of shower particles reaching ground. Applying the search method to data collected between January 2004 and June 2020, upper limits at 95% CL are set to an E-2 diffuse flux of …

An Intercomparison Of Large-Eddy Simulations Of A Convection Cloud Chamber Using Haze-Capable Bin And Lagrangian Cloud Microphysics Schemes, Fan Yang, Fabian Hoffmann, Raymond Shaw, Mikhail Ovchinnikov, Andrew M. Vogelmann

Michigan Tech Publications, Part 1

Recent in situ observations show that haze particles exist in a convection cloud chamber. The microphysics schemes previously used for large-eddy simulations of the cloud chamber could not fully resolve haze particles and the associated processes, including their activation and deactivation. Specifically, cloud droplet activation was modeled based on Twomey-type parameterizations, wherein cloud droplets were formed when a critical supersaturation for the available cloud condensation nuclei (CCN) was exceeded and haze particles were not explicitly resolved. Here, we develop and adapt haze-capable bin and Lagrangian microphysics schemes to properly resolve the activation and deactivation processes. Results are compared with the …

Constraining The Sources Of Ultra-High-Energy Cosmic Rays Across And Above The Ankle With The Spectrum And Composition Data Measured At The Pierre Auger Observatory, A. Abdul Halim, P. Abreu, M. Aglietta, I. Allekotte, K. Almeida Cheminant, A. Almela, B. Fick, D. Nitz, I. Norwood, A. Puyleart, Et. Al

Michigan Tech Publications, Part 1

In this work we present the interpretation of the energy spectrum and mass composition data as measured by the Pierre Auger Collaboration above 6 × 1017 eV. We use an astrophysical model with two extragalactic source populations to model the hardening of the cosmic-ray flux at around 5 × 1018 eV (the so-called "ankle"feature) as a transition between these two components. We find our data to be well reproduced if sources above the ankle emit a mixed composition with a hard spectrum and a low rigidity cutoff. The component below the ankle is required to have a very soft spectrum …

Simulating Mass Extinctions In An Agent-Based Evolutionary Model, Emily Vastola, Will Hayes, Joe Milliano, Tyler Hanke, Ian Heye, Dawn M. King, Sonya Bahar

Undergraduate Research Symposium

In an agent-based model of evolutionary dynamics which has been shown to undergo a nonequilibrium phase transition from extinction to survival, we apply coalescent theory to investigate the responses of population lineages to simulated mass extinctions. In the model, organisms reproduce via assortative mating on a neutral fitness landscape; parameters including the mutability (distance offspring may be distributed away from their parents in the fitness landscape) and the death parameter (percentage of organisms randomly removed during each generation) control the phase transition. Lineage structure can be characterized using the time to most recent common ancestor (TMRCA). We examine how this …

Mathematical Modeling Of Egain Droplets Sliding Down An Inclined Plane, Shawn Koohy, Kathryn Massey, Luis Schneegans, Megan Vezzetti, Keith Hillaire, Souradip Chattopadhyay, Jessie Chen, Carmen Lee, Karen Daniels

Undergraduate Research Symposium

Eutectic Gallium-Indium (EGaIn) is a room-temperature liquid metal alloy that dramatically changes its surface tension and dynamics under an applied electric field. EGaIn has been used heavily in soft electronics engineering due to its high conductivity, malleability, and safety. However, the absence of mathematical modeling in the current literature makes its behavior difficult to understand and predict. In this study, we present a one-dimensional lubrication model for the dynamics of an EGaIn droplet moving along an inclined plane. Our model incorporates essential physical effects and parameters including oxidation, capillary action, diffusion, gravity, and Marangoni effects. In particular, we incorporate effects …

Going All-In With Vector Representations Of Electric And Magnetic Fields In Introductory Calculus-Based Physics, Craig Looney

Physics Faculty Publications

While most introductory calculus-based textbooks introduce a fully-vectorized expression for the electric field due to a point charge, they rarely – if ever – introduce a fully-vectorized expression for the magnetic field due to an infinitely long current, and corresponding field superposition problems are normally solved by the method of components (find magnitudes, break magnitudes into components, sum the respective components). In this poster I will explain why I teach a fully-vectorized approach – starting with the fully-vectorized field expressions and summing the fields vector-algebraically – alongside the more traditional method of components in my introductory calculus-based physics course, and …

Cloud Microphysical Response To Entrainment And Mixing Is Locally Inhomogeneous And Globally Homogeneous: Evidence From The Lab, Jaemin Yeom, Ian Helman, Prasanth Prabhakaran, Jesse Anderson, Fan Yang, Raymond Shaw, Will Cantrell

Michigan Tech Research Data

The effects of entrainment-mixing on the cloud droplet size distribution are examined in the Pi cloud chamber that creates a turbulent supersaturated environment for cloud formation. The experiments are conducted with a temperature-controlled flange to mimic the entrainment-mixing process. The entrainment zone is created at the center of the top surface of the chamber, allowing dry air of controlled temperature (T_e) and flow rate (Q_e) to flow into the mixing cloud region. Due to the large-scale circulation, the downwind region is directly affected by entrained dry air from the flange, whereas the upwind region is representative …

Constraining H0 Via Extragalactic Parallax, Nicholas Ferree

Honors Theses

We examine the prospects for measurement of the Hubble parameter 𝐻₀ via observation of the secular parallax of other galaxies due to our own motion relative to the cosmic microwave background rest frame. Peculiar velocities make distance measurements to individual galaxies highly uncertain, but a survey sampling many galaxies can still yield a precise 𝐻₀ measurement. We use both a Fisher information formalism and simulations to forecast errors in 𝐻₀ from such surveys, marginalizing over the unknown peculiar velocities. The optimum survey observes ∼ 102 galaxies within a redshift 𝐻₀max = 0.06. The required errors …