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Computational Modeling Of Superconductivity From The Set Of Time-Dependent Ginzburg-Landau Equations For Advancements In Theory And Applications, Iris Mowgood

Computational and Data Sciences (PhD) Dissertations

A full review of the research conducted and published during my PhD studies in Computational and Data Sciences at Chapman University, under the advisement of Dr. Armen Gulian, are presented. Using the set of time-dependent Ginzburg-Landau (TDGL) equations with inclusion of the interference current and the non-equilibrium phonon term, we modeled the dynamics of superconductors in various theory revealing states and practical purposes. A review of the history and phenomenon of superconductivity, including modern applications, is introduced. The Josephson effect and associated Josephson junction are discussed for comparison to our analogous results with the 1-D superconducting wire. The mathematics of …

Metasurfaces For Holography, Scott Howell

Physics Capstone Projects

Holography uses the interference of light waves to store information about an object, which can then be seen from different angles to create a partial 3D view. A simple experiment can be done using a laser diode, photographic plate, and a set of dice to create a holographic image. The holographic film is thin and can only hold a single image. Reflection holography can create a 3D diffraction pattern and allows more information to be packed into a single medium. Computer generated holograms can be designed to create holograms without a real object to be used in augmented reality. High …

Engineering Lab Building Telescope Manual, Aidan L. Tueller

Physics Capstone Projects

In partnership with Dr. Jan Sojka, head of the Physics Department, a plan was created to make the telescope on top of the Engineering Lab building operational again for either staff, students, classes, or labs to use. The telescope was purchased through funds by Utah NASA Space Grant Consortium. This paper will contain basic information about how to operate the telescope and use its equipment. There is an online manual from Meade that is much longer but goes into much more detail about individual pieces and specific parts of the telescope.

Self-Consistent Effects Of The Recirculating Plasmapshere On The Development Of Storm Time Dynamics In The Inner Magnetosphere., Christian-Andrew Bagby-Wright

Physics Dissertations - Archive

The near Earth space environment is a highly coupled system. The Interplanetary Magnetic Field (IMF) interacts with the magnetosphere in myriad ways depend on the orientation of the IMF to the magnetosphere. The magnetic fields of the magnetosphere and the IMF trap plasma and carry the plasma with it as both magnetic fields evolve over time. This plasma can in turn interact with other plasmas, carried by other field lines, affecting the dynamics of the other population and the magnetic field lines of both populations. The nature, frequency, and importance of interactions between different plasma, or magnetic fields, varies greatly …

Microscopic And Spectroscopic Analysis Of Nordihydroguaiaretic Acid Effect On Astrocytes, Lizbeth Vanessa Martinez Lopez

Open Access Theses & Dissertations

Astrocytes, one of the most abundant cell components in the central nervous system (CNS), have been a research target in the last few years. Several studies have found that astrocytes are not only mere supporters of neurons but also of essential processes developed in the CNS. Their malfunction could induce neurodegenerative diseases and brain tumors. Thus, further understanding of astrocytes and their role is of high interest to develop possible new treatments and methods of disease diagnosis, especially in brain cancer. The plant Larrea tridentata (La Gobernadora in Mexico or Creosote bush in the United States) is known to have …

Non-Destructive Imaging Of Phytosulfokine Trafficking In Plants Using Fiber-Optic Fluorescence Microscopy, Bernard Abakah

Electronic Theses and Dissertations

Plants secrete peptide ligands and use receptor signaling to respond to stress and control development. Understanding these phenomena is key to improving plant health and productivity for food, fiber, and energy applications. Phytosulfokine (PSK), a sulfated peptide hormone, regulates plant cell division, growth, and stress tolerance via specific phytosulfokine receptors (PSKRs). This study uses fiber-optic fluorescence microscopy to elucidate trafficking of PSK in live plants. The microscope features two-color optics and an objective lens connected to a 1-m coherent imaging fiber mounted on either a conventional upright microscope body or 5-axis positioning system (X–Y–Z plus pitch and yaw). PSK and …

The Nature Of Lobal Qsos. Ii. Hst/Wfc3 Observations Reveal Host Galaxies Dominated By Mergers, Mariana S. Lazarova, Gabriela Canalizo, Mark Lacy, Wyatt Behn, Kaitlyn Raub, Vardha N. Bennert, Duncan Farrah

Physics

Low-ionization broad absorption line QSOs (LoBALs) are suspected to be merging systems in which extreme, active galactic nucleus-driven outflows have been triggered. Whether or not LoBALs are uniquely associated with mergers, however, has yet to be established. To characterize the morphologies of LoBALs, we present the first high-resolution morphological analysis of a volume-limited sample of 22 Sloan Digital Sky Survey (SDSS)-selected LoBALs at 0.5 < z < 0.6 from Hubble Space Telescope Wide Field Camera 3 observations. Host galaxies are resolved in 86% of the systems in F125W, which is sensitive to old stellar populations, while only 18% are detected in F475W, which traces young, unobscured stellar populations. Signs of recent or ongoing tidal interaction are present in 45%–64% of the hosts, including double nuclei, tidal tails, bridges, plumes, shells, and extended debris. Ongoing interaction with a companion is apparent in 27%−41% of the LoBALs, with as much as 1/3 of the sample representing late-stage mergers at projected nuclear separations <10 kpc. Detailed surface brightness modeling indicates that 41% of the hosts are bulge dominated while only 18% are disks. We discuss trends in various properties as a function of merger stage and parametric morphology. Notably, mergers are associated with slower, dustier winds than those seen in undisturbed/unresolved hosts. Our results favor an evolutionary scenario in which quasar-level accretion during various merger stages is associated with the observed outflows in low-z LoBALs. We discuss differences between LoBALs and FeLoBALs and show that selection via the traditional balnicity index would have excluded all but one of the mergers.

Effect On Focusing Fields By Ferromagnetic Cell Cores In Linear Induction Accelerators, Cooper Guillaume

Senior Honors Theses

In the Los Alamos National Laboratories DARHT facility, there are two perpendicular linear induction accelerators, LIAs. The LIAs’ solenoids produce magnetic fields which focus the electron beam. Simultaneously, the accelerating pulse creates a magnetic field. These two field intensities act upon a ferromagnetic material in the cells to enhance magnetic flux density. Due to the nonlinearity of the material, this flux density will reach a saturation point. In turn, the magnetic field intensity of the axial solenoidal magnetic field will be affected and slightly altered. The width of the electron beam will increase, causing a decrease in effectiveness. Through simulation, …

Quantum Phases Of Lattice Dipolar Bosons Coupled To A High-Finesse Cavity, Yaghmorassene Hebib, Chao Zhang, Jin Yang, Barbara Capogrosso-Sansone

Physics

Two types of long-range interactions, dipolar interaction and cavity-mediated interaction, lead to exotic quantum phases. Both interactions were realized and observed in optical lattice setups. Here, we study quantum phases of dipolar bosons trapped in optical lattices and coupled to a high-finesse cavity where both dipolar interaction and cavity-mediated interaction coexist. We perform quantum Monte Carlo simulations and find that the checkerboard solid is enhanced and the checkerboard supersolid phase can exist in a wide range of densities (e.g., 0.27≲n≲0.73). Our unbiased numerical results suggest that both solid and supersolid phases can be achieved experimentally with magnetic atoms coupled to …

Photon Correlation Measurements And Second Harmonic Generation Using Pulsed Lasers, Apoorva Bisht

Physics Undergraduate Honors Theses

Correlation measurements are one of the fundamental ways to understand the photon statistics/distribution for a source of light. It is also an important method to confirm single photon sources by confirming the anitbunching nature. This project developed a correlation measurement system, utilized field programmable gate arrays, and non-linear crystals for processes like second harmonic generation and down conversion.

Apparatus And Instrumentation Design For Investigation Of Surface Impact Effects On Superconductivity, Austin Back

All Theses

The effects of ion irradiation on the physical properties of materials make EBITs an invaluable tool for many scientific and engineering fields. Many experiments rely on the use of these lab setups to test for device reliability, explore surface physics phenomena, and replicate the environment for many physical systems that are not readily accessible. We seek to extend the capabilities of these experiments using the CUEBIT and a new sample holder installed in section 3.

This thesis begins by presenting an overview of the CUEBIT and the basic operations of the equipment. This is followed by a brief explanation of …

The Characterization Of Atmospheric Turbulence And Its Effect On Laser Beam Propagation, Michael Cox

All Theses

Having a controlled environment to measure atmospheric turbulence is essential to understanding its effects on different laser beam characteristics. The Clemson Variable Turbulence Generator (VTG) has the capability to propagate a laser beam up to 100 m and be able to dial many turbulence settings up to a heat flux of 357 W/m². A high-speed camera, power detector, and high-resolution temperature probes characterize the VTG with theoretical turbulence spectrums. The exponent associated with the Rayleigh-Bénard (RB) temperature structure constant equation is studied. Two different laser beam profiles are used throughout this work: Gaussian and Asymmetric Perfect Vortex (APV). …

Boundaries And Currents Of The Dayside Magnetosphere: Mhd Simulations And Observations, Pauline Marie Dredger

Physics Dissertations - Archive

The solar wind streams through space at supersonic speeds, carrying plasma and the interplanetary magnetic field (IMF) from the sun. Earth’s magnetosphere presents a magnetosonic obstacle to the solar wind flow, which slows down suddenly, creating a bow shock. Between the bow shock and Earth’s magnetic field is the region of space called the magnetosheath, which contains the dense plasma and turbulent IMF of the shocked solar wind. The magnetopause is the boundary between the magnetosheath and the region of near-Earth space dominated by the terrestrial magnetic field; its location is determined by the competing pressures of the plasma in …

Investigation Of Optical And Electrical Properties Of Noble Metal And Superconducting Thin Films And Design And Fabrication Of Metamaterial Solar Absorbers, Vivek Khichar

Physics Dissertations - Archive

An extensive study of light-matter interactions leading to the generation of photon drag voltage under surface plasmon resonance conditions in noble metal thin films was undertaken by performing a series of experimental measurements and numerical simulations. The drag voltage originates from a force that arises because of the transfer of momentum from incident light to electrons. This transfer of photon momentum leads to an electric current, which in turn results in the generation of drag voltage. The effect is particularly enhanced under surface plasmon resonance conditions and thereby reinforces the interaction between light and collective oscillations of the surface charges. …

Exploring Ferroelectric Phenomena In Batio3, Linbo3, And Liznsb: From Extended Oxygen Vacancies To Tri-Stable Polarization And Giant Hyperferroelectricity, Shaohui Qiu

Graduate Theses and Dissertations

This dissertation presents three projects that investigate the complex phenomena of ferroelectricity under different conditions in BaTiO3, LiNbO3, and LiZnSb using first-principles density functional calculations. Extended defects in ferroelectric solids play a crucial role in reducing the lifetime and performance of ferroelectric devices by causing fatigue, domain pinning, and aging. Thus, understanding their impact is of critical importance for the development of reliable and high-performance ferroelectric devices. In addition, hyperferroelectricity is an intriguing phenomenon that has attracted much attention in recent years. Despite the existence of depolarization field, spontaneous polarization persists under an open-circuit boundary condition (OCBC), making hyperferroelectric materials …

Search For Photons Above 1019ev With The Surface Detector Of The Pierre Auger Observatory, P. Abreu, M. Aglietta, I. Allekotte, K. Almeida Cheminant, A. Almela, J. Alvarez-Muñiz, B. Fick, D. Nitz, I. Norwood, A. Puyleart, Et Al.

Michigan Tech Publications, Part 1

We use the surface detector of the Pierre Auger Observatory to search for air showers initiated by photons with an energy above 1019 eV. Photons in the zenith angle range from 30° to 60° can be identified in the overwhelming background of showers initiated by charged cosmic rays through the broader time structure of the signals induced in the water-Cherenkov detectors of the array and the steeper lateral distribution of shower particles reaching ground. Applying the search method to data collected between January 2004 and June 2020, upper limits at 95% CL are set to an E-2 diffuse flux of …

An Intercomparison Of Large-Eddy Simulations Of A Convection Cloud Chamber Using Haze-Capable Bin And Lagrangian Cloud Microphysics Schemes, Fan Yang, Fabian Hoffmann, Raymond Shaw, Mikhail Ovchinnikov, Andrew M. Vogelmann

Michigan Tech Publications, Part 1

Recent in situ observations show that haze particles exist in a convection cloud chamber. The microphysics schemes previously used for large-eddy simulations of the cloud chamber could not fully resolve haze particles and the associated processes, including their activation and deactivation. Specifically, cloud droplet activation was modeled based on Twomey-type parameterizations, wherein cloud droplets were formed when a critical supersaturation for the available cloud condensation nuclei (CCN) was exceeded and haze particles were not explicitly resolved. Here, we develop and adapt haze-capable bin and Lagrangian microphysics schemes to properly resolve the activation and deactivation processes. Results are compared with the …

Constraining The Sources Of Ultra-High-Energy Cosmic Rays Across And Above The Ankle With The Spectrum And Composition Data Measured At The Pierre Auger Observatory, A. Abdul Halim, P. Abreu, M. Aglietta, I. Allekotte, K. Almeida Cheminant, A. Almela, B. Fick, D. Nitz, I. Norwood, A. Puyleart, Et. Al

Michigan Tech Publications, Part 1

In this work we present the interpretation of the energy spectrum and mass composition data as measured by the Pierre Auger Collaboration above 6 × 1017 eV. We use an astrophysical model with two extragalactic source populations to model the hardening of the cosmic-ray flux at around 5 × 1018 eV (the so-called "ankle"feature) as a transition between these two components. We find our data to be well reproduced if sources above the ankle emit a mixed composition with a hard spectrum and a low rigidity cutoff. The component below the ankle is required to have a very soft spectrum …

What Does The Geometry Of The Hβblr Depend On?, Lizvette Villafaña, Peter R. Williams, Tommaso Treu, Brendon J. Brewer, Aaron J. Barth, Vivian U, Vardha N. Bennert, Hengxiao Guo, Misty C. Bentz, Gabriela Canalizo, Alexei V. Filippenko, Elinor Gates, Michael D. Joner, Matthew A. Malkan, Jong-Hak Woo, Bela Abolfathi, Thomas Bohn, K. Azalee Bostroem, Goni Halevi, Carol E. Hood, J. Chuck Horst, Maxime De Kouchkovsky, Benjamin Kuhn, Douglas C. Leonard, Raúl Michel, Melanie Kae B. Olaes, Daeseong Park, Jordan N. Runco, Remington O. Sexton, Isaac Shivvers, Chance L. Spencer, Benjamin E. Stahl, Samantha Stegman, Jonelle L. Walsh, Weikang Zheng

Physics

We combine our dynamical modeling black-hole mass measurements from the Lick AGN Monitoring Project 2016 sample with measured cross-correlation time lags and line widths to recover individual scale factors, f, used in traditional reverberation-mapping analyses. We extend our sample by including prior results from Code for AGN Reverberation and Modeling of Emission Lines (CARAMEL) studies that have utilized our methods. Aiming to improve the precision of black-hole mass estimates, as well as uncover any regularities in the behavior of the broad-line region (BLR), we search for correlations between f and other AGN/BLR parameters. We find (i) evidence for a …

Joint Constraints On Kepler-36 From Kepler And New Keck-Hires Data, Nicholas Juliano

UNLV Theses, Dissertations, Professional Papers, and Capstones

I analyze new HIRES Radial Velocity (RV) data in conjunction with transit mid-times and uncertainties from the full 17 quarters of Kepler data to reassess the orbital parameters of the Kepler-36 system. Six additional RV measurements were taken by the Keck-HIRES spectrograph from September 21, 2021 to October 11, 2021. I carry out a differential evolution Markov Chain Monte Carlo-based (DEMCMC) analysis to infer improved orbital elements for the two known planets in the system. Leveraging additional information provided by the new RV measurements, I extend this DEMCMC analysis to a possible three-planet configuration. I explore the likelihood of a …

Tdcosmo - Xii. Improved Hubble Constant Measurement From Lensing Time Delays Using Spatially Resolved Stellar Kinematics Of The Lens Galaxy, Anowar J. Shajib, Pritom Mozumdar, Geoff C.-F. Chen, Tommaso Treu, Michele Cappellari, Shawn Knabel, Sherry H. Suyu, Vardha N. Bennert, Joshua A. Frieman, Dominique Sluse, Simon Birrer, Frederic Courbin, Christopher D. Fassnacht, Lizvette Villafaña, Peter R. Williams

Physics

Strong-lensing time delays enable the measurement of the Hubble constant (H₀) independently of other traditional methods. The main limitation to the precision of time-delay cosmography is mass-sheet degeneracy (MSD). Some of the previous TDCOSMO analyses broke the MSD by making standard assumptions about the mass density profile of the lens galaxy, reaching 2% precision from seven lenses. However, this approach could potentially bias the H₀ measurement or underestimate the errors. For this work, we broke the MSD for the first time using spatially resolved kinematics of the lens galaxy in RXJ1131−1231 obtained from the Keck Cosmic …

Spatial Metabolomics Reveals Glycogen As An Actionable Target For Pulmonary Fibrosis, Lindsey R. Conroy, Harrison A. Clarke, Derek B. Allison, Samuel Santos Valenca, Qi Sun, Tara R. Hawkinson, Lyndsay E. A. Young, Juanita E. Ferreira, Autumn V. Hammonds, Jaclyn B. Dunne, Robert J. Mcdonald, Kimberly J. Absher, Brittany Dong, Ronald C. Bruntz, Kia H. Markussen, Jelena A. Juras, Warren J. Alilain, Jinze Liu, Matthew S. Gentry, Peggi M. Angel, Christopher M. Waters, Ramon C. Sun

Saha Cardiovascular Research Center Faculty Publications

Matrix assisted laser desorption/ionization imaging has greatly improved our understanding of spatial biology, however a robust bioinformatic pipeline for data analysis is lacking. Here, we demonstrate the application of high- dimensionality reduction/spatial clustering and histopathological annotation of matrix assisted laser desorption/ionization imaging datasets to assess tissue metabolic heterogeneity in human lung diseases. Using metabolic features identified from this pipeline, we hypothesize that metabolic channeling between glycogen and N-linked glycans is a critical metabolic process favoring pulmonary fibrosis progression. To test our hypothesis, we induced pulmonary fibrosis in two different mouse models with lysosomal glycogen utilization deficiency. Both mouse models displayed …

Sexual Dimorphism Of Glomerular Capillary Morphology In Rats, Zackarias Coker

Undergraduate Honors Theses

Chronic kidney disease (CKD) progresses faster in males than females; however, the underlying mechanisms remain poorly understood. Sex differences in glomerular capillary morphology has been hypothesized to contribute, in part, to the increased susceptibility to hypertension-induced renal injury and CKD progression in males, but this has not been investigated. The goal of the present study was to assess glomerular capillary morphology in male vs. female rats with intact kidneys and after uninephrectomy (UNX). We hypothesized that glomerular capillary radii (R_CAP) and length (L_CAP) would be greater in male rats.

Male (n=4) and female (n=4) with intact …

Representations Of Time In Time-Based Media: An Exploration Of The Human Experience Of Temporality In Film And Tv, Nelea Fong

Honors Thesis

Time is an aspect of the human experience that fascinates us but eludes our understanding. Humans have turned to science, philosophy, and theology in our endeavor to understand time, but our shared love and history of storytelling drives us to explore temporality through visual medias that have a structural foundation in time. Expanding our understanding of the human experience of time through time-based media such as movies and TV can point us toward comprehending various forms of time and how each person can perceive said time differently. Using film and TV theory, informed by scientific and philosophical explorations in the …

College Of Natural Sciences Newsletter, March - May 2023, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 4, Issue 2

Page 1 Dean's Message
Page 2-7 Awards and Recognition
Page 8 March 3rd Corothers Seminar
Page 9 54th Geography Convention
Page 10 Spring 2023 Day of Scholars
Page 11 2023 URSCAD Snaps
Page 12-14 Media Coverage of CNS
Page 15 Open PRAIRIE Data

Extending The Lifetime Of Optically Stimulated Dosimeters For Use In Output Checks At Iroc- Houston, Hayden Scott

Dissertations and Theses (Open Access)

Purpose: Optically Stimulated Luminescent Dosimeters (OSLDs) are a prominent form of in-vivo dosimeter used both in clinics as well as for the audits of radiological
equipment at the Imaging and Radiation Oncology Core (IROC)-Houston. These
dosimeters have a recommended dose limit of 10 Gy due to a change in signal response with dose. To assist with the OSLD operation at IROC-Houston, evaluating the signal response of these dosimeters with IROC’s methodologies offers the potential to extend the dose limit past 10 Gy, improve the efficiency of handling OSLDs, and reduce the cost and time spent on commissioning OSLDs.
Methods: The …

Determination Of Effective Index Of Refraction Of Structured Materials (Photonic Crystals), Md Arafat Hossain

Theses and Dissertations

Photonic crystals have been widely studied by researchers due to their ability to control light propagation in all spatial directions. For example, 2D photonic crystals can be made of dielectric rods arranged in a square lattice. When light propagates through 2D photonic crystals, it experiences multiple scatterings by the crystal centers. The superposition of all scattered waves forms the transmitted field largely dependent upon the effective index of refraction of the structured material. We propose a method to determine the effective index of refraction through such materials with the Finite-Difference Time-Domain (FDTD) model. We set up the interface of two …

Magnetic Properties Of Polycrystalline Spinel Oxides From Solid State Reaction, Camden Olds

Honors Program: Senior Projects (Public)

Spinel crystal materials of nickel, cobalt, and iron oxides have seen abundant research for their strong conductivity, ferromagnetic and ferroelectric properties, and their catalytic uses. These can be synthesized by a number of means. This project explores the use of the solid state synthesis method, which benefits from simplicity, of this family of materials, looking for interesting phase shift lines in the triangle between of varying compositions of these three metals.

Nickel cobaltite and other related spinels were synthesized from two different solid state approaches and characterized using XRD and SQUID magnetometry. The range 0.5-0.6 of molar ratios of nickel …

Modeling Accuracy Matters: Aligning Molecular Dynamics With 2d Nmr Derived Noe Restraints, Milan Patel

Honors Scholar Theses

Among structural biology techniques, Nuclear Magnetic Resonance (NMR) provides a holistic view of structure that is close to protein structure in situ. Namely, NMR imaging allows for the solution state of the protein to be observed, derived from Nuclear Overhauser Effect restraints (NOEs). NOEs are a distance range in which hydrogen pairs are observed to stay within range of, and therefore experimental data which computational models can be compared against. To that end, we investigated the effects of adding the NOE restraints as distance restraints in Molecular Dynamics (MD) simulations on the 24 residue HP24stab derived villin headpiece subdomain to …

Spectra Of Atmospheric And Astronomical Molecules, W. D. Cameron

Physics Theses & Dissertations

Spectroscopy techniques are focused on spectra of molecules of interest to the Earth’s atmosphere and/or astronomy and astrophysics. Laboratory spectroscopy as well as remote satellite sensing are applied. Using the Fourier transform spectrometer aboard the Atmospheric Chemistry Experiment (ACE) satellite to measure the absorption spectra of the Earth’s atmosphere through solar occultation limb observation demonstrates that volcanic eruption plumes can be located and tracked through their SO₂ content. The presence of those plumes is corroborated by overlaying infrared atmospheric aerosol extinction observed by the 1 μm imager on the same satellite. Tracking atmospheric aerosol movement with the ACE …