Digital Commons Network^™

Terrestrial And Lacustrine Organic Matter Biomolecular Transformations Via Thermal Maturation And Oxidative Degradation, Louis Connor Bondurant

Chemistry & Biochemistry Theses & Dissertations

The most abundant source of fossil fuel-forming kerogen on Earth is classified as Type II kerogen, believed to originate from marine biomass. However, a significant amount of lacustrine and terrigenous carbon is transported to the ocean through fluvial discharge. Less than half of the exported organic carbon is observed in coastal regions and the open ocean. There is a great need for an explanation of what is happening to this organic carbon during transport and deposition. Traditionally, the marine organic matter in coastal regions accumulates to eventually be buried and transformed into petroleum over millions of years due to its …

Sciteuq: Toward Uncertainty-Aware Complex Scientific Table Data Extraction And Understanding, Kehinde Ajayi

Computer Science Theses & Dissertations

Scientific tables report critical research insights, data, and findings for scientific progress. Because Portable Document Format (PDF) is the de facto standard format for scientific paper publishing, there has been an emerging need for an automatic method to extract data from PDF files. A significant fraction of scientific tables exhibit complex structure and content, making it challenging for machine learning tools to accurately extract the content directly from PDF files. Despite the advancements in Table Structure Recognition (TSR), automated extraction of data from complex scientific tables remains a challenge due to variations in table structures and contents. In this dissertation, …

Making Explanations Make Sense: Xai For Smishing Detection, Eleni Alexandra Katsarakes

Psychology Theses & Dissertations

Explainable Artificial Intelligence (XAI) is a key component of effective human-AI collaboration, particularly in high-stakes domains such as cybersecurity. While AI tools hold promise for mitigating threats such as SMS-based phishing (SMiShing), their real-world effectiveness may hinge not just on detection accuracy, but on whether users can make sense of the system’s outputs. As SMiShing attacks grow in both frequency and sophistication, so does the urgency of designing human-centered AI systems that support user decision-making under uncertainty. This study examined how four distinct AI explanation types - Normative (rule-based), Attributive (feature-based), Exemplar (case-based), and Recommendation-Only - influence user performance, confidence, …

A Kinematic, Data-Parameterized Approach To Constrain Subducted Seafloor During The Emplacement Of Shatsky Rise, Alexzandrya Katrina Shotorban

OES Theses and Dissertations

This study investigates ridge spreading rates and plate boundary geometry in interactions between large igneous provinces and mid ocean ridges, and their role in the kinematics of Shatsky Rise, an undersea volcanic plateau in the western Pacific Ocean that is roughly the size of the state of California. Shatsky Rise formed at a ridge-ridge-ridge (RRR) triple junction (TJ) (Hilde et al., 1976; Sager et al., 1988), at the intersection of the Pacific-Izanagi, Pacific-Farallon, and Izanagi-Farallon ridges, beginning at approximately 147 Ma. Investigations into Shatsky Rise’s formation are limited by the fact that two-thirds of the seafloor data has subducted with …

Component Model Development Of Heat Exchangers, Expanders, And Control Valves For Autonomous Cryogenics Plant Cool-Down, William Harris Buhrig Iv

Mechanical & Aerospace Engineering Theses & Dissertations

The traditional method of cryogenic plant cool-down involves having continuous on-call staff to head into the office at any time to modify the existing multi-layered PID control systems if the on-call staff member detects a significant deviation from the cool-down plan. This thesis aims to outline an effective method for modeling the structure of systems with performance characteristics that deviate from design requirements and from ideal inlet-outlet correspondence, enabling the adjustment and modification of existing control structures across all Thomas Jefferson National Accelerator Facility (JLab) cryogenic refrigeration plants. Analytical Modeling and Gaussian Process Regression (GPR) are applied to model the …

Qualitative Stereo Vision Using Distributed Extended Waltz Filtering, Ben Mathew

Theses and Dissertations

Stereo vision is a fundamental problem in computer vision, aimed at reconstructing three-dimensional scene structure from two or more two-dimensional images. Traditional stereo algorithms rely on quantitative disparity estimation, often constrained by calibration precision, lighting variations, and surface texture. In contrast, our proposed Qualitative Stereo Vision seeks to understand depth relationships and spatial configurations from multiple planar views through symbolic reasoning and constraint satisfaction, offering a more flexible and cognitively plausible approach to scene interpretation.

This dissertation presents a novel framework called Distributed Extended Waltz Filtering, designed to provide qualitative stereo vision, particularly in the presence of occlusions—a persistent challenge …

Computational Expressions Of Void Reactions In Extended Chemical Reaction Network Models, Aiden J. Massie

Theses and Dissertations

Chemical Reaction Networks (CRNs) are a system of abstraction of real-world chemical dynamics. Each CRN system is defined as a pair of molecular species and reaction rules, which consume a set of reactant species and create a new set of product species. In this paper, we investigate the simple class of void reactions, which cannot create new species and are computationally weak with small-enough sizes in basic CRNs. Here, we study their computational expression in more powerful extended CRN models. Specifically, we consider the Step CRN model, in which new species are added into the system through a sequence of …

Interactive Effects Of Nutrient Loading And Hyposalinityon The Physiological Responses Of The Red Macroalga Gracilaria Tikvahiae, Donavuan Vincent Salazar

Theses and Dissertations

Coastal macroalgae face anthropogenic stressors such as nutrient enrichment from nitrogen fertilizers and reduced salinity linked to flooding. The physiological impacts of these combined stressors remain unclear. This study examined interactive effects of nitrogen loading and hyposalinity on Gracilaria tikvahiae through a 9‑day laboratory experiment. Samples experienced declining salinity (35–0 ppt) with nitrate or ammonia enrichment (120 µmol/L). Measurements included primary production, respiration, biomass, nitrate uptake, and chlorophyll‑a. Hyposalinity significantly reduced physiological performance, with gross primary production declining over 100%, chlorophyll‑a content 25–45% lower, biomass loss, and reduced nitrogen uptake. Nitrogen enrichment failed to mitigate the adverse impacts under hyposaline …

Modern Water And Sediment Transport Patterns In Alluvial Ridge Basins Of The Rio Grande Delta, South Texas, Usa, Waqid Nabi

Theses and Dissertations

Alluvial ridge (AR) basins are shallow, marine-influenced depressions within river deltas, yet their flow and sediment dynamics remain poorly understood. This study examines hydrodynamics and sediment transport patterns in the Bahia Grande Complex, which are AR basins of the Rio Grande Delta, using tilt current meters, water-level and turbidity loggers, and suspended and bed-sediment sampling. The AR basins function as wind-dominated, microtidal environments, where pre-existing basin geometry and hydrodynamic forcings control water flow and sediment distribution patterns. Seasonal wind patterns and storms modulate water levels and flow connectivity. Substrate patterns reflect frequent resuspension in the shallow northern basin, maintaining coarse …

Design And Evaluation Of Gamified Kahoot Modules For Improving Engagement And Conceptual Understanding Of Introductory Physics Students, Yaritza Villarreal

Theses and Dissertations

This study investigates the effectiveness of gamified learning modules in enhancing the engagement and conceptual understanding of introductory physics students. The first phase of this study focused on the design and development of gamified learning modules for selected topics in introductory physics. The modules were developed by integrating principles of Backward Design, following an escape-room theme with interactive scenarios, and incorporating classic game elements (e.g., points and leaderboards).

The second phase examined the effectiveness of the gamified Kahoot modules using a pretest-posttest control-group design. Sixty-eight (68) students were equally randomly assigned to the control and experimental groups. The experimental group …

Visionglow: Evaluating Minimal-Disruption Smart-Home Control In Apple Vision Pro, Hongxiao Zheng

Dartmouth College Master’s Theses

Smart-home control in mixed-reality environments like Apple Vision Pro often relies on disruptive, application-based paradigms, such as using a smartphone or a windowed virtual interface. These methods create a “mode switch” that imposes cognitive load and pulls users from their primary tasks. We present VisionGlow, a minimal-disruption spatial interaction technique for Vision Pro. VisionGlow represents devices as spatially-anchored “orbs.” To control a device, the user looks at its orb and performs a pinch gesture, which invokes a compact, contextual control panel. We conducted a within-subjects study (N=18) comparing VisionGlow against two baselines: the standard Apple Home app on a smartphone …

Evaluating Fall And Spring Planted Cover Crops For Integrated Management Of Herbicide Resistant Palmer Amaranth And Effect On Soil Health, Vipin Kumar

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Herbicide-resistant Palmer amaranth (Amaranthus palmeri S. Watson) pose a severe threat to agronomic crop productivity in the United States, including corn and soybean production in Nebraska. Therefore, there is an urgent need for diversified and sustainable management approaches. Integrating cover crops (CCs) with herbicide programs represents a promising strategy to achieve Palmer amaranth suppression, sustain crop yields, and contribute to long-term soil health in irrigated corn–soybean production systems in Nebraska.

A meta-analysis of 41 studies and 595 paired observations demonstrated that CCs reduced Amaranthus spp. density and biomass by 37–59% depending on the growing season, with grasses and mixtures …

Detecting Prescribed Fire, Haying And Grazing Events Via Remote Sensing To Create Grassland Disturbance Landcovers For The Ring-Necked Pheasant (Phasianus Colchicus), Megan Amy Baldissara

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation developed disturbance detection models to fulfill the need for remote sensing landcover products describing grassland structure. The use of landcover products derived from remote sensing is increasing over time in pheasant (Phasianus colchicus) research. Such landcover, however, does not provide relevant pheasant structural habitat information (Chapter 1). Pheasants require tall, high-density grassland for nesting, tall grassland with medium density for brood rearing, and tall grassland for wintering. Time since disturbance can serve as a proxy for structure, as it shapes vegetation by removing biomass and resetting succession. Disturbance is easier to detect than structure with current …

Global, Continental, And Local Scale Paleoenvironmental Reconstruction Methods For Interpreting The History Of Miocene North America And The Great Plains, Willow Hue Nguy

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The Miocene of North America is characterized by dynamic changes in herbivore communities, habitat composition, and global climate. Long-term cooling and drying trends influenced large changes in floral and faunal communities. The Great Plains, North America shifted from closed-canopy biomes to open-canopy biomes with C3-grasses to biomes with C4-grasses. This shift affected the herbivore communities as browsing-adapted ungulates were replaced by grazing-adapted ungulates. Much focus has centered on the Great Plains, so it is not well understood how the changes in biomes compare to other regions of North America. The models used for vegetation density indicate open-canopy biomes since at …

Investigating Programming Behaviors To Understand Student Engagement And Experience In Introductory Programming Courses, Marcus Eugene Gubanyi

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Introductory programming courses are foundational to developing students’ problem-solving abilities and shaping their persistence in computing pathways. Engagement with programming tasks plays a central role in student learning and experience. Many research measures, including self-reports and code submissions, offer only a limited view of student engagement with programming tasks. This dissertation leverages programming process data, consisting of keystrokes and compilation events, to capture the programming process as it unfolds and to investigate observable programming behaviors. Guided by educational theories, three studies examine how students’ programming behaviors vary across instructional and assessment contexts, how they relate to motivational profiles, and how …

Large-Scale Experimental Study On The Impact Of Air Cleaning & Ventilation On Indoor Air Quality And Student Illness-Related Absenteeism, Daud Nosham

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This large-scale randomized experimental field study investigated the effect of portable air purifiers (PAPs) on classroom’s air quality and student’s illness related absenteeism. PAPs were installed in 317 classrooms from various school districts located in Eastern Nebraska. The classrooms were randomly assigned into four conditions: three treatment conditions (T1, T2 & T3) and one control condition (device without any filter). T1 was equipped with HEPA filters, T2 added Activated Carbon (AC) layer to HEPA, and T3 further integrated Germicidal Ultraviolet (GUV) alongside HEPA and AC filters. The measured variables were carbon dioxide (CO2), fine particles (PN2.5) and coarse particles (PNcoarse), …

An Integrated Modeling Framework To Evaluate Circularity Of The Corn–Water–Ethanol–Beef Nexus, Heydi Han

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation examines the transition from conventional linear agricultural and food bioenergy systems toward more circular, resilient, and resource-efficient configurations. Prior research indicates that spatial and temporal variability in soil, weather, animal biological responses, and management decisions strongly influences productivity, nutrient-use efficiency, and profitability. Studies have also shown that a diversified circular system can buffer these sources of variability, improving stability and adaptive capacity. Building on these insights, the central focus of this work is to develop an integrated modeling framework to evaluate circularity within the Corn-Water-Ethanol-Beef (CWEB) nexus and explore how climate variability and management choices shape system-wide performance. …

Making Deep Neural Networks Trustworthy: Intelligibility And Safety Through Symbolic Methods, Eleanor Catherine Quint

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The rapid adoption of deep learning has come at the cost of properties long valued in artificial intelligence: intelligibility and safety. This dissertation develops methods that restore these properties by coupling neural networks with symbolic structure.

First, for supervised classification, I propose a differentiable decision tree integrated with a supervised variational autoencoder. The resulting model maintains competitive accuracy and generative performance while exposing clear macro-features in its latent space, improving interpretability.

Second, for reinforcement learning, I extend constrained Markov decision processes by specifying constraints in formal languages. This formal language constrained MDP enables the use of automata for state augmentation, …

Data-Driven Streamflow Forecasting In The Upper Colorado River Basin Using Spatio-Temporal Graph Networks, Akhila Akkala

All Graduate Theses and Dissertations, Fall 2023 to Present

Forecasting river flow is essential for managing water supplies, reducing flood risk, and supporting healthy ecosystems. In the Upper Colorado River Basin, much of the yearly water comes from melting snow. However, many traditional models struggle to capture how snowpack and river flow interact, especially across such a large and complex region.

This study uses a modern machine learning approach called a Spatio-Temporal Graph Neural Network (STGNN) to improve streamflow prediction. The model uses Snow Water Equivalent (SWE)—a measure of how much water is stored in the snowpack—along with river flow data. By treating each river gauge as part of …

Optimization In The Synthesis Of Dual Ionic-Liquid-Functionalized Cellulosic Materials, Megan L. Franke

Honors College Theses

There is a growing urgency to develop sustainable alternatives to petroleum-based materials as concerns about environmental impact and resource depletion intensify. Among renewable biopolymers, cellulose stands out as one of the most abundant and versatile organic compounds on Earth. As the structural backbone of plant cell walls, it provides rigidity and mechanical strength, while its abundance, biodegradability, and tunable chemistry make it an attractive candidate for sustainable materials. Beyond its traditional uses in textiles, paper, and food additives, cellulose has been increasingly investigated in polymer chemistry for advanced

applications. The present study aims to optimize synthetic routes to dual ionic …

Predicting Major Solar Flares Using Convolutional Neural Networks And Multivariate Magnetic Field Time-Series Data, Arash Azizian Foumani

All Graduate Theses and Dissertations, Fall 2023 to Present

Major solar flares are sudden, intense bursts of X-ray energy from the Sun, capable of severely impacting critical technological infrastructure like satellites, communication networks, and power grids on Earth. Accurate prediction of these high-intensity events is crucial but presents a significant challenge. This is largely due to their infrequent occurrence and the complex, dynamic nature of the Sun's underlying magnetic activity which drives these events. This research focuses on improving the prediction of major solar flares by utilizing detailed historical data that tracks the evolution of magnetic properties within solar active regions over time. This time-based data, however, contains inherent …

Array Of Mini-Graphene-Silicon Solar Cells Intermittently Recharges Storage Capacitors Powering A Temperature Sensor, Ashaduzzaman, Syed M. Rahman, Md R. Kabir, James M. Mangum, Hung Do, Gordon Carichner, David Blaauw, Paul M. Thibado

Physics Faculty Publications and Presentations

Developing autonomous sensor systems that draw power from the ambient environment is a critical step for creating the Internet of Things. In this study, the authors built dozens of graphene-based solar cells, wire bonded them into standard packages, and characterized the current-voltage characteristics of each under illumination. Next, solar cells were connected in series to increase the output voltage. Three different sets of solar cells were used to charge three storage capacitors to the voltage levels required by our temperature sensor. The storage capacitors require only a few minutes to charge, yet power the sensor system for more than 24 …

Soil Organic Carbon Depth Profiles And Centennial And Millennial Decay Rates In Tidal Marsh, Mangrove And Seagrass Blue Carbon Ecosystems, Nerea Piñeiro-Juncal, Miguel Ángel Mateo, Carmen Leiva-Dueñas, Eduard Serrano, Karina Inostroza, Montserrat Soler, Eugenia T. Apostolaki, Paul Lavery, Carlos M. Duarte, Anna Lafratta, Oscar Serrano

Research outputs 2022 to 2026

The management of coastal blue carbon ecosystems can contribute to mitigate anthropogenic greenhouse gas emissions. However, limited information on soil organic carbon (OC) decay rates in tidal marsh, mangrove, and seagrass soils hinders their inclusion in climate strategies and carbon-crediting schemes. Here, we analyzed downcore OC trends in 3761 soil cores from blue carbon ecosystems worldwide. A decrease in OC content with soil depth was measured in 63% of the cores, whereas stable and increasing trends were observed in 22% and 15% of the cores, respectively. Based on 85 profiles where OC decay could be modelled, the OC decay rate …

Navigating Ai-Nature Frictions: Autonomous Vehicle Testing And Nature-Based Constraints, Prerona Das, Orlando Woods, Lily Kong

Research Collection College of Integrative Studies

In cities, the application of Artificial Intelligence (AI) is being directed towards transforming different aspects of urban life. These applications take material form in urban spaces, with autonomous vehicles (AVs) providing a prominent example. AI systems rely on large volumes of data on their surroundings to refine the algorithms and enhance the accuracy of prediction for operational efficiency and safety. However, such algorithmic learning and execution can present challenges when dealing with the unpredictable, complex, and dynamic aspects of urban spaces. Nature is a paradigmatic example of such unpredictability, because natural phenomena usually defy consistent patterns and precise data-based modelling. …

Benthic Infaunal Responses To Shoreline Restoration, Jessica Lauren Cline

Theses and Dissertations

In the age of increasing urban coastal sprawl, natural shorelines are being replaced by hard armoring structures, which result in the loss of valuable ecosystem services. Hybrid living shorelines, areas that include limited and less intensive armoring strategies paired with the integration of plants and other natural materials, present an opportunity to marry the need for more aggressive stabilization with the continued preservation of ecosystem functions and biological communities. This project uses benthic infauna to evaluate the success of a living shoreline installation in Palm Bay, Florida. The deployment features experimental treatments of breakwaters and red mangroves to explore how …

Quantum Entanglement As A Resource For Coordinating Navigation, Aamir Ahmad

Theses and Dissertations

John Clauser, Michael Horne, Abner Shimony, and Richard Holt (CHSH) originally formulated the CHSH game as an experiment to establish entanglement as a quantum mechanical phenomenon that could not be predicted by classical theories. I will apply the quantum strategy used in the CHSH game to demonstrate that it also establishes a structure that employs entanglement as a resource to enable coordination without communication in the context of navigation.

Auction Consensus Algorithm With Loss Mechanism For Decentralized Task Allocation, Jose Rodriguez, Wenjie Dong, Constantine Tarawneh, Qi Lu

Electrical and Computer Engineering Faculty Publications

This paper presents an Auction-Consensus Algorithm with a Loss Mechanism (ACALM), a decentralized task allocation method for multi-robot systems that enhances the existing Consensus-Based Auction Algorithm (CBAA) by incorporating a novel loss propagation mechanism. In contrast to purely greedy bidding strategies, it enables agents to dynamically update task priorities based on the accumulated loss from previously unsuccessful bids. This extended work reduces globally inefficient allocations caused by early suboptimal decisions. The proposed approach is evaluated through large-scale simulations in thousands of randomized scenarios and swarm sizes ranging from 5 to 120 robots. Compared to existing CBAA and GCAA algorithms, ACALM …

Privacy, Identity, And Fairness: Unpacking Ethical Influences On Metaverse Adoption In University Learning, Mousa Al-Kfairy, Meera Alalawi, Saed Alrabaee, Omar Alfandi

All Works

As immersive technologies like the Metaverse continue to reshape higher education, it becomes increasingly vital to examine the ethical dimensions shaping student engagement with these platforms. This study investigates how university students perceive privacy, digital identity, informed consent, and algorithmic fairness in Metaverse-based classrooms, and how these perceptions influence their trust and behavioral intention to adopt the technology. A quantitative survey was conducted with 310 university students, all of whom had prior exposure to virtual learning platforms. Using Partial Least Squares Structural Equation Modeling (PLS-SEM) via SmartPLS 4.0, the study found that Metaverse Ethical Dimensions (MED) significantly influence both Trusting …

Reinforcement Learning Based Intelligent Optimisation For Bin Packing Problems: A Review, Nadia Dahmani, Amril Nazir, Ikbal Taleb, Syed M.Salman Bukhari

All Works

The convergence of Reinforcement Learning (RL) and Bin Packing Problems (BPP) is a critical field of study that has profound ramifications in logistics, manufacturing, computer, and retail industries. This paper thoroughly examines the progression from simple rule-based tactics to advanced Deep Reinforcement Learning (DRL) techniques in solving BPPs. By conducting a thorough review of 231 papers conducted between 2019 and 2024, we address and provide answers to important research inquiries, such as “To what extent has academic research explored the use of RL for BPP during this time frame?” and “Which specific areas of application and methodologies have been predominantly …

Precision Agriculture In The Age Of Ai: A Systematic Review Of Machine Learning Methods For Crop Disease Detection, Munir Majdalawieh, Carla Martins, Mohammed Radi, Maher Alaraj, Shafaq Khan

All Works

Artificial Intelligence (AI) has become a critical tool in modern precision agriculture, particularly in the detection of plant diseases and pests. This study provides a comprehensive review of current AI methodologies applied to crop disease detection, with a focus on machine learning models, dataset availability, and performance metrics. Our findings indicate that Convolutional Neural Networks (CNNs) are the most widely used and cost-effective approach, while Vision Transformers (ViTs) exhibit superior accuracy but require significantly higher computational resources. We identify key research gaps, including the geographic bias in dataset origins, the trade-off between data quality and quantity, and the limited exploration …