Digital Commons Network^™

Ecological Responses To Living Shoreline Restoration, Aaron S. Bland

Graduate Theses and Dissertations (2019 - present)

Coastal built communities and natural coastal ecosystems face similar and interrelated hazards: shoreline sediment erosion, shoreline retreat, and worsening storms, each of which is exacerbated by relative sea level rise. Living shorelines are coastal defense projects that incorporate natural habitats to provide more sustainable shoreline defense and improve the coastal ecosystem. Living shorelines have been widely adopted, but their performance has been highly variable, and the mechanisms of project success and failure are unclear. The overarching goal of this dissertation was to better understand the ecosystem responses to coastal restoration, focusing on the primary habitats of coastal salt marsh and …

Analysis Of Collective Behavior In Living And Nonliving Systems, Kaitlyn Cohan

Theses, Dissertations and Culminating Projects

This thesis aims at understanding the phenomenon of of self-organization in complex dissipative systems, living and nonliving. Dissipative systems are characterized by their search for energy, interactions with their surroundings and the production of entropy, all of which result in the creation of stable structures or patterns, which persist as long as the initial environmental conditions are maintained. The two specific models that we chose to study here are (a) Futbol (or Soccer) and (b) a chemical system involving free-floating menthol crystals floating on a fluid surface to represent nonliving systems. Using experiments and mathematical models, we will try to …

Volume 17, Christian O’Neill, Kyara Greene, Savva Sidorov, Laura Bisaillon, Luke Clemmer, Hannah Gordon, Kitt Benson, Taylor Blount, Rachel Danzitz, Nicholas Duellman, Chase Gionis, Hima Fernando, Seth Franzyshen, Onyx Gonzalez, Bryan Lin, Samantha Start, Ysabel Wells, Maggie Duncan

Incite: The Journal of Undergraduate Scholarship

Introduction Dr. Amorette Barber, Director, Office of Student Research

From the Editor Dr. Hannah Dudley-Shotwell

Cover Artist’s Statement Maggie Duncan

On Mentoring Dr. Yulia Uryadova

Ukrainian Resistance in the Face of Russification: Nestor Makhno and Anarchism

by Christian O’Neill

Life Vest by Kyara Greene

Isolation and 16S rRNA Identification of Bacteria from Fire Department Connection Pipe by Savva Sidorov

The Effectiveness of Planned Exercise in Reducing ADHD Symptoms in Children by Laura Bisaillon & Luke Clemmer

Linguistic Analysis on Confidence and Communication Strategies with Disparities Between Sign Fluency and Hearing Impairment by Hannah Gordon

Freedmen in Indian Territory by Kitt …

Analyzing The Evolution Of Science: Topological Cycles And Community Detection In Knowledge Networks, Frances C. Mcconnell

Mathematics, Statistics, and Computer Science Honors Projects

How scientific knowledge grows and organizes itself is a central question in the study of science. This thesis uses tools from topology and network science to detect and characterize knowledge gaps—places in a field’s literature where related concepts do not co-occur. We develop a metric to quantify the degree of interdisciplinarity of each gap, using the community structure of the underlying network as a proxy for subfields. Across a wide range of fields, gaps reliably span multiple subfields and evolve in recognizable temporal patterns, highlighting new insights into how scientific fields are structured and their stage of development.

Utilizing Pine Needles To Compare Spatial Profiles Of Polycyclic Aromatic Hydrocarbons (Pahs) In Two Urban Areas, Autumn Jensen

Undergraduate Honors Capstone Projects

Polycyclic aromatic hydrocarbons (PAHs) are an important class of semivolatile air pollutants known for their adverse health impacts. This research used conifer needles as passive air samplers to create spatial maps of two Utah cities (Rose Park and Spanish Fork) to compare overall PAH exposure and identify any differences in their congener profiles or PAH “fingerprints”. Conifer needles were chosen due to their prevalence as a passive air sampler in previous research and their ubiquity in urban and suburban environments. Second year needles were collected and the concentrations are considered to be an annually averaged view of the PAH concentrations …

Pattern Dynamics And Stochasticity Of Brain Rhythms And Spike Trains In A Tauopathy Mouse Model Of Alzheimer’S Disease, Clarissa M. Hoffman

Dissertations and Theses (Open Access)

Systems neuroscience posits that every aspect of perceived physical reality, every aspect of animal and human behavior, and every cognitive phenomenon emerges from patterns of neuronal activity. While most researchers embrace this idea, there are major difficulties in describing and analyzing these complex neuronal dynamics—spike flows produced by cells ensembles, synchronized extracellular field oscillations, and other patterns—which limits our understanding of how the activity of individual neurons and the whole-animal cognition and behavior might be connected. In particular, we lack the approaches and even the semantics for connecting the individual cell outputs and the integrated results of their activity. Current …

Membrane Organization Of Rheb And Rhoa: Roles In Function And Allosteric Druggability, Chase M. Hutchins

Dissertations and Theses (Open Access)

Small GTPases of the Ras superfamily are membrane-bound molecular switches that regulate nearly all major cellular processes, and their dysregulation drives cancers, neurological disorders, and metabolic diseases. While anchored to cellular membranes, the catalytic domains of small GTPases undergo orientation dynamics, adopting distinct configurations that can occlude or expose effector-binding surfaces and modulate signaling output. These dynamics have been characterized in the Ras oncoproteins, but whether they extend across the superfamily and influence allosteric druggability has remained unknown.

In this dissertation, I address these questions through Rheb and RhoA, two small GTPases with complementary differences in subfamily lineage, membrane localization, …

Securing Cloud-Native Systems: From Vulnerability Analysis To External And Insider Threat Detection, Jiongchi Yu

Dissertations and Theses Collection (Open Access)

Cloud-native systems have become the backbone of modern software infrastructure. However, their dynamic resource orchestration and complex configurability introduce a large attack surface and intricate security challenges. Adversaries can externally exploit vulnerabilities in cloud components or perform insider movement within cloud environments to launch attacks. As these systems increasingly support critical services, security breaches can lead to severe operational and economic consequences.

Despite extensive efforts in vulnerability detection and attack monitoring, existing approaches struggle to remain effective in cloud-native environments characterized by rapid evolution and inherent heterogeneity. In particular, they exhibit three fundamental limitations: (1) Insufficient understanding of defect patterns …

Learning Global Context For Sparse Activity Recognition In Lengthy Recordings With Limited Dataset Size, Zeyu Tang

All Dissertations

This dissertation describes methods to analyze lengthy recordings of data in order to detect sparsely occurring activities. The narrative below describes the progression of research that led to the development of these methods and their generalization into a unified framework. My research started with designing models for dietary monitoring, including detecting meals from day-long recordings and detecting intake gestures from meal-length recordings. Both tasks share some common characteristics: (a) the target event takes only a small portion of data recordings, and (b) there is global context within full-length data recordings that can help a model make better decisions. After finishing …

The Impact Of Label Material On Perceived Value And Environmental-Friendliness Of Beverages In Returnable Glass Bottles Versus Actual Environmental Impact Via Life Cycle Assessment, Toni Sharp

All Dissertations

With guidance from the EPA to reduce virgin packaging use and alternatively increase reuse, the concept of reusable packaging has re-emerged as a potential sustainable alternative to single-use and recyclable packaging. For businesses, an understanding of the potential environmental benefits of switching from single-use packaging to reusable packaging, along with consumer willingness to pay for sustainable packaging are paramount. Existing literature on willingness to pay (WTP) for ethical or sustainable products typically relies on consumers’ stated preferences found through surveys using hypothetical products and prices. It has been revealed that sustainability claims printed on the label or products in glass …

Advancement In Electrochemical Generation-Collection: Snapshot Redox Cycling Voltammetry For Rapid Analysis At Chip-Based, Individually Addressable Microband Electrode Arrays, Blake Aleck Sterling

Graduate Theses and Dissertations

Snapshot redox cycling voltammetry (Snapshot RCV) is introduced as a rapid electrochemical technique that reconstructs the current-potential profile of a redox active species using a microband electrode array. By simultaneously biasing individual generator electrodes alternating in the array to different voltages across the analyte’s potential range while individually holding collector electrodes at a reversing potential, “spatial” voltammetry is achieved in as little as 1 s with the temporal speed of chronoamperometry, rapidly capturing the steady-state redox cycling (RC) profiles. During RC (a mode of generation-collection), the analyte is oxidized (or reduced) at generator electrodes and converted back at neighboring collector …

Deciphering Chemomechanical Couplings In Proteins Using Molecular Dynamics And Enhanced Sampling Techniques, Matthew Brownd

Graduate Theses and Dissertations

Proteins function through a complex interplay between chemical interactions and mechanical motions across multiple spatial and temporal scales. Understanding how ligand binding, conformational dynamics, and structural flexibility collectively regulate protein function remains one of the central challenges in molecular biophysics. This dissertation presents a computational investigation into chemomechanical coupling in three distinct classes of biomolecular systems using all-atom molecular dynamics (MD) simulations and enhanced sampling methods, with particular emphasis on free-energy calculations and long-timescale conformational analysis. The first part of this work focuses on ligand binding in hyperpolarization-activated cyclic nucleotide-gated (HCN) channels, which regulate rhythmic electrical activity in the heart …

Developmental Mathematics As A Potential Barrier To Degree Completion In Community Colleges, Cynthia Bernice Fletcher

Graduate Theses and Dissertations

Developmental mathematics is often seen as a barrier to student progression in community colleges, especially for students pursuing Associate of Science degrees requiring math coursework. This quantitative, ex post facto, non-experimental study examined how developmental mathematics factors predicted Associate of Science degree completion at a two-year community college in the West South-Central United States. Specifically, it assessed how academic performance in developmental mathematics, placement method, math pathway, and number of developmental math courses related to Associate of Science degree completion, as well as differences across student subgroups. Archival institutional data were used for first-time-in-college students across four cohorts: 2018, 2019, …

Mechanism Of Formation Of Guanine-Guanine Crosslinks As Products Of One-Electron Oxidation Of 1-Methylguanosine In Acidic Medium, Ibrahim Braimah Mr

Electronic Theses and Dissertations

Reactive oxygen species (ROS) from normal metabolism and environmental exposure may cause oxidative DNA damage. Guanine (G) is the most oxidizable nucleobase. One-electron oxidation (OEO) of G in produces guanine radical cation (G•⁺), which deprotonates to form guanyl radical G(-H)•.This radical exists in two tautomeric forms: G(N1-H)• and G(N2-H)•. Dimerization of guanyl radical yields G-G cross-links (D1/D2); a tautomeric form for dimer formation remains elusive. This study presents the first characterization of G• dimerization products from the OEO of 1-MeGuo in acidic medium. Photolysis at 470 nm in the presence of S₂O₈²⁻ and Ru(II)(bpy)₃²⁺ generates two major stereoisomers (D1AW* and …

Passive Microwave Remote Sensing Of Flash Drought Impacts On Vegetation, Quinton R. Deppert

School of Natural Resources: Dissertations, Theses, and Student Research

In 2002, Dr. Mark Svoboda characterized a new form of drought known as flash drought. Flash drought was defined as a rapid decline in vegetation health caused by severe heat and drought. In recent years, attempts to quantify the impacts of flash drought via precipitation, soil moisture, evapotranspiration, and temperature indicators have proliferated. What has rarely been quantified is what the rapid decline in vegetation health amid flash drought looks like through remote sensing. This is because vegetation health indices like the Normalized Difference Vegetation Index (NDVI) are derived from the visible and infrared regions of the electromagnetic spectrum and …

Comparing Awssi And Traditional Winter Metrics For Predicting Overwinter Survival Of Juvenile Walleye (Sander Vitreus), Camille N. Shifrin

Honors Program: Senior Projects (Public)

Winter conditions are an important driver of recruitment variability in freshwater fishes, yet winter severity is often characterized using single climate metrics. These simplified approaches may not capture the cumulative stress experienced by fishes during winter. The Accumulated Winter Season Severity Index (AWSSI) integrates multiple components of winter climate and may therefore provide a more biologically relevant indicator of overwinter survival. In this study, we compared AWSSI with traditional winter severity metrics to explain interannual variation in overwinter survival of juvenile Walleye (Sander vitreus) in Harlan County Reservoir, Nebraska. Model comparisons using Akaike’s Information Criterion (AIC) indicated that …

Construction Impacts On Nutrient Loads In An Urban Stream In The Ozark Highlands, Matthew B. Wilson

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

Degradation of water quality is primarily caused by human activity, including urbanization. Urban stream syndrome can be characterized as a stream that has undergone physical, chemical, and biological changes as a result of urbanization, which can include an influx of nutrients that can drive unwanted plant and algae growth. It is known that construction can result in untreated nutrients entering a stream; however, it is not understood how construction affects downstream nutrient transport. The objective of this study was to understand the impacts of construction on urban water quality in Tanglewood Branch in Fayetteville, Arkansas, in the Ozark Highlands, which …

Conservation Agriculture Effects On Greenhouse Gas Emissions From Cotton, Soybean, And Corn In Southeast Arkansas, Jonathan Benjamin Brye

Graduate Theses and Dissertations

The slow degradation of natural resources has resulted in the focus of agriculture shifting towards conservation practices, such as reduced/no-tillage, cover crops (CC), and organic amendments (i.e., biochar), that conserve and improve natural resource quality. The objectives of this thesis were to i) quantify the impacts of biochar rate (i.e., 0, 2000, and 4000 kg ha-1) and ii) the combination of CC and tillage practice on carbon dioxide (CO¬2), methane (CH4), and nitrous oxide (N2O) fluxes, growing-season-long emissions, global warming potential (GWP), soil properties, and plant response from a minimally tilled cotton (Gossypium hirsutum)-corn (Zea mays) rotation and a soybean …

Effects Of Beaver Dams On Components Of Riverscape Health And Biodiversity In The Great Basin, Cashe C. Rasmussen

All Graduate Theses and Dissertations, Fall 2023 to Present

Networks of rivers and their floodplains (i.e., low-lying areas adjacent to rivers and streams that could plausibly flood) have been degraded, reducing the availability of freshwater and habitat for people and wildlife. Therefore, land managers are pursuing cost-effective restoration strategies, including partnering with beavers (Castor canadensis), to promote the health of these ecosystems and associated benefits. However, our understanding of beaver-mediated restoration benefits remains incomplete. Here, we compared locations along streams with and without beaver dams to measure the benefits of beavers in the Great Basin of the Western United States. We measured the effects of beaver dams …

Modeling Causal Interactions Across Brain Functional Systems For Population-Specific Disease Analysis, Alissen Moreno

Theses and Dissertations

Functional brain connectivity provides critical insight into neural mechanisms underlying neurodegenerative and affective disorders. Traditional neuroimaging studies rely on undirected or region-specific connectivity measures developed predominantly using racially homogeneous cohorts, limiting fairness and generalizability across diverse populations.

We propose a population-aware framework modeling directed causal interactions across large-scale brain functional subnetworks. Resting-state fMRI data from the HABS-HD cohort were used to construct subject-level causal connectivity matrices via ICA-LiNGAM, aggregated into interpretable system-level hyper-connectomes representing interactions among eleven canonical brain subsystems. These features trained nonlinear models for Alzheimer’s disease stage classification and trait worry prediction.

Results demonstrate that MLP models outperform …

Enhancing Walleye (Ogaa) Recruitment: Evaluating Assisted Reproduction As A Mitigation Strategy, Douglass Keiser

Biology Graduate Theses

Over the past several decades, cold- and cool-water fish populations across the Upper Midwest, including Minnesota and Wisconsin, have shown troubling signs of decline. Among the most affected is the walleye/Ogaa (Sander vitreus), a species deeply embedded in the ecological balance, cultural identity, and economic vitality of the region, and central to the lifeways, treaty-reserved rights, and resource stewardship of Tribal Nations, including Ojibwe communities across the Upper Midwest. Despite ongoing stocking efforts and harvest regulations, many lake systems have experienced persistent declines in natural recruitment, prompting resource agencies to investigate the underlying causes. One such system is …

Modeling Water Quality And Cyanobacteria Blooms In St. Lucie Estuary, Florida, Mohmmad Masudur Rahman

Electronic Theses and Dissertations

The St. Lucie Estuary (SLE) on Florida’s east coast is vital for diverse aquatic life and provides essential services to local communities. However, the estuary’s health is threatened by water quality deterioration due to nutrient-driven phytoplankton blooms, particularly cyanobacteria, which have increased in frequency over recent decades. These blooms may worsen water quality by reducing dissolved oxygen, altering pH, and increasing turbidity. Moreover, some phytoplankton species, including Microcystis aeruginosa, a freshwater cyanobacteria species, produce harmful toxins, posing risks to both marine aquatic life and human health in this area. Primary nutrient sources in this estuary include watershed freshwater discharges, …

Federated Neuromorphic Intelligence: Advancing Robustness, Efficiency, And Continual Adaptation In Edge Environments, Manh V. Nguyen

Dissertations

This dissertation investigates how spiking neural networks (SNNs) can improve federated edge intelligence by advancing three interconnected goals: communication efficiency, adversarial robustness, and continual adaptation. As edge computing deployments expand across Internet of Things (IoT), sensing, and privacy-sensitive applications, conventional federated learning approaches built around artificial neural networks (ANNs) face growing limitations in power consumption, bandwidth demand, and resilience to real-world uncertainty. SNNs offer an alternative computational paradigm based on event-driven, sparse, and temporally structured processing that is naturally suited to constrained edge environments. However, their behavior in practical federated settings remains insufficiently understood.

To address this gap, this dissertation …

Fret Studies On The Binding Of Fibroblast Growth Factor (Fgf) Proteins To The Hard Corona Of Cuins2-Based Quantum Dots, Colette Robinson

Graduate Theses and Dissertations

Fibroblast Growth Factor (FGF) has been shown to be an important protein in angiogenesis, which is critical in developmental biology and wound healing but has also been implicated in cancer metastasis. FGF interacts with an FGF Receptor (FGFR) to signal the onset of angiogenesis but the detailed mechanism of angiogenesis, and particularly its regulation, is still largely unknown. Imaging the interaction of FGF with FGFR in biologically-relevant environments, such as directly in cells, is key towards furthering this understanding and may eventually aid in the development of better cancer treatments. CuInS2/ZnS quantum dots (QDs) are an attractive fluorescent probe to …

From Phenology To Yield Zones: Functional Clustering Of Satellite Time Series For Crop Growth Monitoring, Ikram Morso

Graduate Theses and Dissertations

Remote sensing and land surface phenology provide a strong basis for characterizing crop development, but their usefulness for within-field yield-zone delineation depends on whether crop development is analyzed as a phenological trajectory and whether the resulting zones are evaluated with spatially defensible statistics. These questions are especially relevant in soybean production because soybean is one of the most important row crops in the United States and the country’s dominant oilseed crop. This relevance is strong in Arkansas, where soybean is a major component of agricultural production. In soybean production, within-field yield variability reflects the combined influence of soil properties, stand …

Effects Of Wetting And Drying On Nutrient Mobilization In Aquatic Systems, Karessa Grace De La Paz

Graduate Theses and Dissertations

Wetting and drying cycles are a fundamental, but underexplored, control on nutrient mobilization and transport in aquatic ecosystems. Such intermittency impacts approximately 60% of the world's streams and rivers, and the extent is expected to increase with future climate change. Additionally, aging reservoir infrastructure is driving restoration efforts, like large-scale drawdowns, that can expose benthic sediments to extended dry periods before refilling. Despite the prevalence of wet-dry cycles, how they influence nutrient transport and mobilization across different aquatic ecosystems remains poorly understood. To address this gap, this thesis presents two complementary studies exploring nutrient dynamics in Arkansas aquatic ecosystems that …

Soil Property Responses To Push-Pull Cropping In East Africa, Grace Mercy Amboka, Mattias Jonsson, Celina Apel, David Meinhof, Adomas Liepa, Frank Chidawanyika, Andargachew Detebo, Felipe Librán-Embid, Emily A. Martin, Ingolf Steffan-Dewenter, Marcell K. Peters, Jie Zhang, Michael Thiel, Michael Otim, James Mugisha, Ghebremedhin Belay Bahta, Fredah Maina, Alice Murage, Benjamin Feit, A. Sigrun Dahlin

All Peer-Reviewed Publications

Push-pull technology is increasingly promoted in sub-Saharan Africa, particularly for pest management and enhancing crop productivity. However, its influence on soil properties remains understudied, despite its potential implications for soil health and sustainable soil fertility management. This study examines soil properties in push-pull and conventional non-push-pull cropping systems. Soil samples were collected from push-pull and conventional plots in Ethiopia, Kenya, Rwanda, and Uganda. We examined the associations between soil physicochemical properties and cropping systems, along with key components of push-pull, namely Desmodium coverage and plot age, and manure and mineral fertiliser application. Overall, there were a few differences in soil …

2024 Annual Operations And Maintenance Report 2024 Bres Annual Summary Report For Work Completed In Quadrant 4, Butte-Silver Bow Department Of Reclamation And Environmental Services

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.

Manned Exploration Of Satellites Of The Outer Planets: An Analysis Of Current Technologies And A Discussion Of Advancements Required, Joshua Carson Meador

Theses and Dissertations

The Solar System’s outer planets have many satellites, some of which are known to be the most likely places to find extraterrestrial life in our celestial backyard. Multiple scientific missions have been sent to glean information from these satellites, yet the possibility of a manned expedition has long been exclusive to science fiction stories. This paper intends to collect and analyze the current state of space travel technology to explore the feasibility of such a mission with modern technology and to discuss which future advancements should be the focal point for making such missions a reality. To begin, data on …

Design And Simulation Of Anti-Resonant Hollow-Core Fiber For Sensing Applications, Pravallika Kante

Theses and Dissertations

This thesis presents the design and simulation of an 8-tube single-ring anti-resonant hollow-core fiber for sensing applications, with particular emphasis on methane gas detection at the fundamental absorption wavelength of 3.3 µm. Conventional solid-core silica optical fibers exhibit strong multi-phonon material absorption beyond 2.5 µm, rendering them fundamentally unsuitable for efficient light guidance and direct gas sensing at mid-infrared wavelengths. Anti-resonant hollow-core fibers overcome this limitation by guiding light predominantly through an air-filled hollow core via the anti-resonant reflecting optical waveguide mechanism, in which the thin silica glass walls of the cladding tubes act as Fabry-Pérot etalons that confine the …