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Agriculture And Food In Crisis: Conflict, Resistance, And Renewal [Book Review], Charles A. Francis

Department of Agronomy and Horticulture: Faculty Publications

Edited by Fred Magdoff and Brian Tokar. 2010. Monthly Review Press, New York, New York, United States. 348 p. Paperback, cloth US$ 75.00, paper US$ 18.95, ISBN-13 978-1-58367-226-6.

That doubling of food production over the next four decades will be needed to adequately nourish our human population is not news, but the incredible steps essential to achieve that goal and their political and social implications are less well reported. In this series of 16 essays edited by Fred Magdoff and Brian Tokar, several thoughtful specialists in global food issues explore the historical, biological, economic, energy, political and social dimensions of …

Ccpa Regulates Arginine Biosynthesis In Staphylococcus Aureus Through Repression Of Proline Catabolism, Austin S. Nuxoll, Steven M. Halouska, Marat R. Sadykov, Mark L. Hanke, Kenneth W. Bayles, Tammy Kielian, Robert Powers, Paul D. Fey

Department of Chemistry: Faculty Publications

Staphylococcus aureus is a leading cause of community-associated and nosocomial infections. Imperative to the success of S. aureus is the ability to adapt and utilize nutrients that are readily available. Genomic sequencing suggests that S. aureus has the genes required for synthesis of all twenty amino acids. However, in vitro experimentation demonstrates that staphylococci have multiple amino acid auxotrophies, including arginine. Although S. aureus possesses the highly conserved anabolic pathway that synthesizes arginine via glutamate, we demonstrate here that inactivation of ccpA facilitates the synthesis of arginine via the urea cycle utilizing proline as a substrate. Mutations within putA, rocD, …

Identification Of The Biogenic Compounds Responsible For Size-Dependent Nanoparticle Growth, Paul M. Winkler, John Ortega, Thomas Karl, Luca Cappellin, Hans R. Friedli, Kelley Barsanti, Peter H. Mcmurry, James N. Smith

Civil and Environmental Engineering Faculty Publications and Presentations

The probability that freshly nucleated nanoparticles can survive to become cloud condensation nuclei is highly sensitive to particle growth rates. Much of the growth of newly formed ambient nanoparticles can be attributed to oxidized organic vapors originating from biogenic precursor gases. In this study we investigated the chemical composition of size-selected biogenic nanoparticles in the size range from 10 to 40 nm. Particles were formed in a flow tube reactor by ozonolysis ofα-pinene and analyzed with a Thermal Desorption Chemical Ionization Mass Spectrometer. While we found similar composition in 10 and 20 nm particles, the relative amounts of …

Calling For Justice In The Goldfields Of Tanzania, Madoshi H. Makene, Jody Emel, James T. Murphy

Geography

Tanzania is the third largest gold exporter in Africa, thanks in part to the liberalization of the mining sector which started in the early 1990s. Neoliberal mining reforms promised a win-win situation in which government, investors and local host communities would benefit through export earnings, profits, local employment, andcorporate social responsibility initiatives (e.g., the building of schools and clinics). While the rising price of gold and foreign investments in mining activities have delivered on some of these promises, many residents in mining regions have not benefited socioeconomically. Worse still, their communities have unjustly borne the brunt of the environmental, social, …

Biological Effects Of Copper On Prosopis Pubescens (Screw Bean Mesquite), Marian Nicte Zappala

Open Access Theses & Dissertations

Phytoremediation is an emerging technology for cleaning industrial and urban contamination (Peuke and Rennenberg, 2005). Many factors including germination rate, biomass changes, biochemical changes, and nutrient changes must be determined in order to utilize a plant for phytoremediation. Our results showed that Prosopis pubescens (Screw bean mesquite) is a hyperaccumulator of copper from copper sulfate and a feasible option to remediate fields with up to 200 ppm of copper sulfate.

Screw bean mesquite seeds are viable even after 30 years of storage. Both copper sulfate and copper nitrate decreased the germination rate of screw bean mesquite seeds. In soil grown …

Disparities In Park Availability, Features, And Characteristics By Social Determinants Of Health Within A U.S.-Mexico Border Urban Area, Amir Kamel

Open Access Theses & Dissertations

Background: Parks have been shown to be a key feature in the built environment that promote physical activity and positively influence health. However, a number of studies have highlighted that park availability, park features (e.g., park facilities, amenities, and aesthetic features), and park characteristics (e.g., quality/safety concerns of the park and surrounding neighborhood) are not equally distributed across neighborhoods in the U.S, specifically areas of low socioeconomic status and diverse racial/ethnic composition. The overall aim of this study was to examine and describe park availability, park features, and park characteristics, and determine their association with two social determinants of health …

Cloud Security: A Case Study In Telemedicine, Michael Johnstone

Research outputs 2012

Security as part of requirements engineering is now seen as an essential part of systems development in several modern methodologies. Unfortunately, medical systems are one domain where security is seen as an impediment to patient care and not as an essential part of a system. Cloud computing may offer a seamless way to allow medical data to be transferred from patient to medical practitioners, whilst maintaining security requirements. This paper uses a case study to investigate the use of cloud computing in a mobile application for Parkinson Disease. It was found that functionality took precedence over security requirements and standards.

Exploration Games Played On A Ddr Pad Can Constitute Beneficial Physical Exercise, Kimthy Nguyen, Bohan Li, Martin Masek, Yuwanuch Gulatee

Research outputs 2012

The addition of an exercise component to computer games is a method that attempts to increase exercise compliance among the population. Various attempts at such games have been made, both commercially and as research projects, but the set of studied game mechanics that are both entertaining and provide beneficial exercise are relatively small. In our work, a game mechanic was designed for a floor-based input controller (DDR Pad). Rather than the standard mechanic usually employed for this device, our approach allows the player to explore a virtual world, requiring exertive movements on the input device in order to progress. The …

Stable Isotope Analysis Of Busycon Sinistrum To Determine Fort Walton-Period Seasonality At St. Joseph Bay, Northwest Florida, Ryan Michael Harke

USF Tampa Graduate Theses and Dissertations

ABSTRACT

Recent archaeological investigations indicate that coastal Fort Walton cultures in the St. Joseph Bay region of northwest Florida emphasized marine and estuarine foraging. These late prehistoric (A.D. 1000-1500) peoples collected fish, shellfish, and other aquatic resources. At the Richardson's Hammock site (8Gu10), radiocarbon-dated to about A.D. 1300, as at dozens of other shell middens around this salty bay, large gastropods were a major subsistence component. This adaptation is in sharp contrast with that of contemporaneous inland Fort Walton societies, who relied on maize agriculture. It is unknown whether coastal groups represent separate hunter-gatherer-fisher populations or seasonal migrations by inland …

Provenance And Geological Significance Of Red Mud And Other Clastic Sediments Of The Mugnano Cave (Montagnola Senese, Italy), Francesco Iacoviello, Ivan Martini

International Journal of Speleology

The Mugnano cave is characterized by a thick clastic sedimentary fill showing a great variability of sedimentary facies, ranging from clay to coarse-grained sand deposits. This paper deals with combined sedimentological and mineralogical (XRD and SEM) studies of these sediments and bedrock insoluble residues in order to understand the origin and geological significance of cave deposits, with particular attention to red mud sediments, often considered as the residue of host rock dissolution. Three different sedimentary facies were recognized: i) YS, yellow sand with occasionally shell fragments, testifying the arrival of sediments from the surrounding landscape; ii) RS, red laminated mud; …

Probability Of Identification: A Statistical Model For The Validation Of Qualitative Botanical Identification Methods, Robert A. Labudde, James M. Harnly

Mathematics & Statistics Faculty Publications

A qualitative botanical identification method (BIM) is an analytical procedure that returns a binary result (1 = Identified, 0 = Not Identified). A BIM may be used by a buyer, manufacturer, or regulator to determine whether a botanical material being tested is the same as the target (desired) material, or whether it contains excessive nontarget (undesirable) material. The report describes the development and validation of studies for a BIM based on the proportion of replicates identified, or probability of identification (POI), as the basic observed statistic. The statistical procedures proposed for data analysis follow closely those of the probability of …

Transmission Ft-Ir Spectroscopic Analysis Of Human Kidney Stones In The Hyderabad Region Of Pakistan, Muhammad Hussan Khaskheli, Syed Tufail Hussain Sherazi, Huma Mazhar Ujan, Sarfaraz Ahmed Mahesar

Turkish Journal of Chemistry

The purpose of the present study was to investigate the composition of kidney stones removed from human patients. Seventeen samples were collected after surgery (5 females and 12 males; age range 2 to 60 years). The samples were analyzed for composition by transmission Fourier transform infrared (FT-IR) spectroscopy. The 17 analyzed samples of kidney stones comprised 29.4% calcium oxalate, 29.4% uric acid, 29.4% calcium oxalate (CaOx)-uric acid, 5.9% phosphate, and 5.9% calcium oxalate-phosphate stones. The results of the study indicated that transmission FT-IR spectroscopy could be used as an environmentally friendly technique for rapid screening of kidney stones.

Optimization Of A New Cloud Point Extraction Procedure For The Selective Determination Of Trace Amounts Of Total Iron In Some Environmental Samples, Celal Duran, Duygu Özdeş, Eli̇f Çelenk Kaya, Hali̇t Kanteki̇n, Volkan Numan Bulut, Mehmet Tüfekçi̇

Turkish Journal of Chemistry

A new, simple, and rapid cloud point extraction (CPE) procedure system, combined with flame atomic absorption spectrometry (FAAS), was developed for selective separation, preconcentration, and determination of trace amounts of total iron in some environmental samples. The complexing agent, N,N'-(2,2'-(ethane-1,2-diylbis(oxy)) bis(ethane-2,1-diyl))bis(2-chloroacetamide) (EDBOCA), is selective at pH 5.0 for only Fe(II) and Fe(III) ions in the presence of Cu(II), Pb(II), Cd(II), Mn(II), Co(II), Cr(III), Cr(VI), Ni(II), Zn(II), Al(III), Mo(VI), Pd(II), Pt(IV), Au(III), and V(V) ions. The procedure is based on the complexation of Fe(III) ions with EDBOCA reagent in the presence of Triton X-114 (TX-114) as a non-ionic surfactant. The optimum …

Calcium Montmorillonite Clay Reduces Urinary Biomarkers Of Fumonisin B₁ Exposure In Rats And Humans, Abraham Robinson, Natalie M. Johnson, A. Strey, John F. Taylor, Alicia Marroquin-Cardona, N. J. Mitchell, Evans Afriyie-Gyawu, Nii-Ayi Ankrah, Jonathan H. Williams, Jia-Sheng Wang, Pauline E. Jolly, R. J. Nachman, Timothy D. Phillips

Environmental Health Sciences: Faculty Publications

Fumonisin B1 (FB1) is often a co-contaminant with aflatoxin (AF) in grains and may enhance AF’s carcinogenicity by acting as a cancer promoter. Calcium montmorillonite (i.e. NovaSil, NS) is a possible dietary intervention to help decrease chronic aflatoxin exposure where populations are at risk. Previous studies show that an oral dose of NS clay was able to reduce AF exposure in a Ghanaian population. In vitro analyses from our laboratory indicated that FB1 (like aflatoxin) could also be sorbed onto the surfaces of NS. Hence, our objectives were to evaluate the efficacy of NS clay to reduce urinary FB1 in …

Grazing On Synechococcus Spp. By The Red-Tide Dinoflagellate Karenia Brevis: Implications For Bloom Dynamics In The Gulf Of Mexico, Leo A. Procise

OES Theses and Dissertations

Karenia brevis, the toxic dinoflagellate responsible for massive red tides in the Gulf of Mexico (GOM), causes fish kills, shellfish poisoning, and acute respiratory irritation in humans. Bloom initiation and maintenance have been linked to the physical environment as well as various nutrient input mechanisms. To date, efforts to quantify nitrogen (N) sources fueling K. brevis blooms in the GOM have not included mixotrophic grazing although many dinoflagellates, including K. brevis, are known to be capable of mixotrophy. This dissertation reports field and laboratory results demonstrating that natural bloom populations and K. brevisisolates from the West Florida …

Selective Capture Of Transcribed Sequences: A Promising Approach For Investigating Bacterium-Insect Interactions, Ruisheng An, Parwinder Grewal

School of Earth, Environmental, & Marine Sciences Faculty Publications

Bacterial interactions with eukaryotic hosts are complex processes which vary from pathogenic to mutualistic. Identification of bacterial genes differentially expressed in the host, promises to unravel molecular mechanisms driving and maintaining such interactions. Several techniques have been developed in the past 20 years to investigate bacterial gene expression within their hosts. The most commonly used techniques include in-vivo expression technology, signature-tagged mutagenesis, differential fluorescence induction, and cDNA microarrays. However, the limitations of these techniques in analyzing bacterial in-vivo gene expression indicate the need to develop alternative tools. With many advantages over the other methods for analyzing bacterial in-vivo gene expression, …

N-Acetyl-L-Cysteine Amide Protects Retinal Pigment Epithelium Against Methamphetamine-Induced Oxidative Stress, Nuran Ercal, Joshua W. Carey, Shakila Tobwala, Xinsheng Zhang, Atrayee Banerjee, Eylem Y. Pinarci, Humeyra Karacal

Chemistry Faculty Research & Creative Works

Methamphetamine (METH), a highly addictive drug used worldwide, induces oxidative stress in various animal organs. Recent animal studies indicate that methamphetamine also induces oxidative stress in the retina, which is an em- bryonic extension of the forebrain. The aim of this study, therefore, was to evaluate the pro- tecttive effects of N-acetylcysteine amide (NACA) against oxidative stress induced by METH in retinal pigment epithelium (RPE) cells. Our stud- ies showed that NACA protected against METH- induced oxidative stress in retinal pigment epithelial cells. Although METH significantly de- creased glutathione (GSH) levels and increased reactive oxygen species (ROS) and malondial- dehyde …

Biosynthesis Of Marineosin, A Spiroaminal Undecylprodiginine Natural Product, Shaimaa Mohamed Salem

Dissertations and Theses

Marineosins A and B are two spiroaminal-ring containing tripyrrole compounds isolated from the marine actinomycete, Streptomyces CNQ-617, and were found to possess potent and selective cytotoxic activity against leukemia and melanoma. Marineosins belong to the prodiginines class of natural products, examples of which are undecylprodiginine and streptorubin B. Unlike marineosins, prodiginines structures are characterized by the presence of fully conjugated tripyrrole nucleus linked to an alkyl chain (that lacks any oxygen). Cyclic prodiginines arise from an oxidative cyclization of the alkyl chain onto the tripyrrole, a step catalyzed by Rieske-oxygenase like enzymes such as RedG. The biosynthesis of prodiginines is …

The Effects Of Oyster Harvest On Resident Oyster Reef Communities And Reef Structure In Coastal Louisiana Proper, Steven Lee Beck

LSU Master's Theses

Harvest of the eastern oyster (Crassostrea virginica) is a primary contributor to oyster reef habitat disturbance in the northern Gulf of Mexico. The impacts of oyster dredging on reef substrate and resident fauna have not been thoroughly examined on the extensive sub-tidal oyster reefs of Louisiana. Several reef structure and resident community metrics were compared on unharvested and harvested reefs during the spring, summer, and fall of 2010. Unharvested reefs had higher amounts of oyster clusters, solid reef substrate, and more large oysters, while harvested reefs had higher amounts of loose shell, mixed shell/mud substrate, and elevated chlorophyll-a levels. Overall, …

Evaluation Of Pleistocene To Holocene (Mis 5 To 1) Climatic Changes In Southwestern Black Sea: A Palynological Study Of Dsdp Site 380, Shannon Ferguson

LSU Master's Theses

Site 380 of the Deep Sea Drilling Program [DSDP] is located in the southwestern region of the Black Sea (42°05.94’, 29°36.82’E). The location of this site is important due to its proximity to the narrow Bosphorus strait, the only present-day connection between the Black Sea and the Aegean Sea. Drops in eustatic sea level during extensive Pleistocene glacial episodes disconnected the Black Sea from the Aegean Sea at the Bosphorus strait, creating a change from brackish to freshwater within the Black Sea during these intervals. Organic-walled phytoplankton (dinoflagellate cysts, acritarchs, and fresh-water algae) are investigated to better constrain these glacio-eustatic …

Biomass And Mass Balance Isotope Content Of Mussel Seep Populations, Philip Martin Riekenberg

LSU Master's Theses

Cold seep mussels, Bathymodiolus childressi, are common cold seep constituents that form large populations at upper continental slope (500-1000 m) cold seep sites in the Northern Gulf of Mexico. These mussels utilize methane present through symbiotic relationships with methanotrophic bacteria. This study uses a coupled isotope technique to determine the relative incorporation of respiratory carbon in the shell as a measure of the availability of methane between different seep sites. This method indicates a higher abundance of methane at the Brine Pool site than at the Bush Hill site which appears significantly more resource limited and that changes in methane …

Pmi 5011 Regulates The Ubiquitin Proteasome System In Skeletal Muscle, Heather Christianne Kirk-Ballard

LSU Doctoral Dissertations

Insulin resistance in type 2 diabetes is associated with impaired glucose and protein metabolism in skeletal muscle. The impaired insulin signaling in skeletal muscle affects muscle mass by tilting the balance between skeletal muscle protein synthesis and degradation toward degradation, a process that is primarily regulated by the ubiquitin-proteasome system. Studies have shown that an extensively characterized ethanol extract of Artemisia dracunculus L (Russian Tarragon), termed PMI 5011, enhances insulin signaling in human primary skeletal muscle cells and in a rodent model of insulin resistance. The aim of this project is to determine if the effect of PMI 5011 on …

Influences On Behavior Adaptations To Reduce Exposure To Environmental Hazards Among Residents Of Louisiana's Upper Industrial Corridor, Corrinthia Marie Hinton

LSU Master's Theses

Over the past century, the growth in petrochemical manufacturing within Louisiana’s Upper Industrial Corridor brought economic development, but also introduced toxic emissions and environmental exposure risks to residents of the area. For the citizens living in close proximity to multiple facilities there is the added risk of chemical exposure from environmentally hazardous accidents. This study seeks to gain insights into patterns of risk-reducing behaviors of residents in East Baton Rouge Parish so that better educational outreach programs can be developed. This research addresses the following questions: To what extent are residents of Baton Rouge taking steps to reduce environmental exposure …

Effects Of Mimic Artificial Oyster Reefs On The Ecology Of Juvenile Fishes In Marsh Ponds: A Before-After-Control-Impact Analysis, Steven B. Garner

LSU Master's Theses

I sought to assess the enhancement potential of mimic artificial oyster reefs (MAORs) on trophic dynamics of juvenile estuarine fishes in marsh ponds. Tropic dynamics were investigated by determining the impacts of MAOR addition on meiofauna and macrofauna and then comparing these results to the gut contents and condition of four abundant estuarine fishes: Atlantic croaker (Micropogonias undulatus), bay whiff (Citharichthys spilopterus), sand seatrout (Cynoscion arenarius), and pinfish (Lagodon rhomboides). Samples were collected every other month for two years (March 2009 – 11) employing a Before-After-Control-Impact (BACI) design. Halfway through the experiment (March 2010), two mud sites in two marsh …

Cluster Based Jamming And Countermeasures For Wireless Sensor Network Mac Protocols, David Trammell

LSU Doctoral Dissertations

A wireless sensor network (WSN) is a collection of wireless nodes, usually with limited computing resources and available energy. The medium access control layer (MAC layer) directly guides the radio hardware and manages access to the radio spectrum in controlled way. A top priority for a WSN MAC protocol is to conserve energy, however tailoring the algorithm for this purpose can create or expose a number of security vulnerabilities. In particular, a regular duty cycle makes a node vulnerable to periodic jamming attacks. This vulnerability limits the use of use of a WSN in applications requiring high levels of security. …

Good Men Grow Corn: Embodied Ecological Heritage And Health In A Belizean Mopan Community, Kristina Linda Baines

USF Tampa Graduate Theses and Dissertations

Recent developments in land rights and land use in the Toledo district, Belize has generated anthropological and activist interest surrounding traditional ecological knowledge and practice, and the role of heritage in communities. This study explores the connection between ecological knowledge and practices, and the concurrent construction of heritage, and community health and wellness, broadly defined. Developing and using the concept of "embodied ecological heritage," this dissertation takes a phenomenological approach to understanding the convergence of ecological heritage and health in multiple realms of everyday life, arguing that lived experience of participating in "traditional" practices is fundamentally connected to wellness in …

Tagline: Information Extraction For Semi-Structured Text Elements In Medical Progress Notes, Dezon K. Finch

USF Tampa Graduate Theses and Dissertations

Text analysis has become an important research activity in the Department of Veterans Affairs (VA). Statistical text mining and natural language processing have been shown to be very effective for extracting useful information from medical documents. However, neither of these techniques is effective at extracting the information stored in semi-structure text elements. A prototype system (TagLine) was developed as a method for extracting information from the semi-structured portions of text using machine learning. Features for the learning machine were suggested by prior work, as well as by examining the text, and selecting those attributes that help distinguish the various classes …

"Planting Wholesome Seeds": Organic Farming And Community Supported Agriculture At Sweetwater Organic Community Farm, Philip R. Mcnab

USF Tampa Graduate Theses and Dissertations

Sweetwater Organic Community Farm is an organic farm and environmental education center located in Tampa, Florida. The farm employs the community supported agriculture (CSA) model, in which members pay a single fee before the growing season begins and receive a weekly or biweekly share of the ongoing harvest in return. Using multiple ethnographic methods, this research aimed to understand the daily operations at Sweetwater as well as the perceptions of staff and CSA members. Findings indicated that there were myriad perceived advantages of organic agriculture but also imposing challenges that needed to be overcome. Moreover, staff members acknowledged the challenges …

Responses To Chemical Exposure By Foraminifera: Distinguishing Dormancy From Mortality, Benjamin James Ross

USF Tampa Graduate Theses and Dissertations

The Deepwater Horizon blowout in 2010 released an estimated 4.9 million barrels of crude oil into the Gulf of Mexico in the 83 days between the initial explosion and the capping of the well. Response included extensive use of Corexit© oil dispersant. Although South Florida was spared exposure by currents, this event highlights the need for effective bioassay organisms for coral reefs. Amphistegina spp. are benthic foraminifers that host diatom symbionts in a relationship similar to that of coral and their zooxanthellae. Amphistegina spp. occur abundantly in reef communities nearly worldwide, are easily collected and maintained in culture, and are …

Habitat- And Region-Specific Reproductive Biology Of Female Red Snapper (Lutjanus Campechanus) In The Gulf Of Mexico, Dannielle Helen Kulaw

LSU Master's Theses

This study compares reproductive biology estimates of female red snapper among three habitat types (natural shelf-edge banks, standing petroleum platforms and toppled petroleum platforms) and among six regions in the Gulf of Mexico (central Florida, northwest Florida, Alabama, Louisiana, north Texas and south Texas). In both studies, batch fecundity and spawning frequency increased with length, weight and age, and batch fecundity was best correlated with maternal length. Gulf-wide, 75% maturity was achieved by age-3 and 100% maturity was reached by age-8. Sizes- and ages-at-maturity differed among habitat types and regions. Females from natural habitat reached 50% maturity the slowest (age-5, …