Digital Commons Network^™

Named Entity Recognition From Biomedical Text, Maged Guirguis

Theses and Dissertations

As vast amounts of unstructured data are becoming available digitally, computer-based methods to extract relevant and meaningful information are needed. Named entity recognition (NER) is the task of identifying text spans that mention named entities, and to classify them into predefined categories. Despite the existence of numerous and well-versed NER methods, the bio-medical domain remains under-studied. The objective of this research is to identify an efficient technique for NER tasks from biomedical data. This is achieved by investigating using deep learning technologies namely pre-trained BERT [1] model and its variances SciBERT [2] and BioBERT [3]. Preprocessing the data before passing …

Classifying Emotions And Toxicity On Audio To Text Signals From Videos On Youtube, Connice Trimmingham

Theses and Dissertations

Recent technological advancements have pushed humans past the boundaries of a computer screen. They have facilitated human-computer-interaction that were once inconceivable including emotional and audio engagement. Users are now able to utilize technology in more human-like ways and instantaneously transfer depth of opinions and emotions. This global prominence of modern technology, specifically with social media, has spawned a new norm, in which it is now a reasonable expectation of encountering high online toxicity on social media platforms. In addition, the complexities of human emotions make it challenging to determine whether toxic comments trigger certain emotions or vice versa. This study …

Bridging The Cultural Divide: A Single Case Study Exploring Connections Between Multi-Cultural Education, Identity, Self-Esteem And Leadership, Amy Britton

Journal of Multicultural Affairs

This qualitative single case study explores connections between multicultural education, identity development, self-esteem, and leadership. The study focuses on the lived experiences of a lifelong learner, educator, and leader in higher education with the pseudonym, Rachel. The interview with Rachel traced how she experiences diversity within her academic experiences as a learner and her professional experiences as an educator and leader.

The Emerging Scholars Issue: Insights On Teaching And Leading Through Reshaping Policy And Practice, Lakia M. Scott, Taylor D. Bunn

Journal of Multicultural Affairs

The Emerging Scholars program began at the 2019 Texas-NAME conference with five graduate students, four of which were enrolled in a doctoral program. Students participated in preconference workshops on establishing a research agenda, understanding academia and higher education institutions, and creating a network as an education researcher. Since its inception, the program has continued introducing students to collaborations and publication opportunities through Texas-NAME. This special issue provides doctoral students (some of whom have since graduated) with an opportunity to be single-authors in their scholar. Organized in three distinct sections, readers will be exposed to research and policy briefs and critical …

Multimodal Image Retrieval Combining Image And Text, Md Imran Sarker

Theses and Dissertations

Retrieving visual or textual similarities from an image query and vice versa has drawn much interest in computer vision. With the growth of the E-commerce marketplace, image retrieval provides excellent competitive opportunities for vendors and customers through a robust recommendation system. Feature integration has always been an essential task for multimodal-based image retrieval approaches. However, different existing matching techniques have been used separately for visual and text similarity. Still, researchers are looking for new methods when it comes to multimodal Image Retrieval. In this paper, I study the image retrieval task, where the input query is an image plus text …

Anneli Lax: They Think, Therefore We Are, Elena Anne Corie Marchisotto

Journal of Humanistic Mathematics

No abstract provided.

Blending Mathematics Teaching With Kindness, Kien H. Lim, Anthony Matsuura

Journal of Humanistic Mathematics

Mathematics can be intellectually demanding, engaging, and fulfilling. Learning mathematical concepts adequately warrants an environment where students can err without penalty, shame, or hurtful consequences. Teaching mathematics efficaciously depends on the trusting relationship between the teacher and the students. We advocate blending mathematics teaching with kindness because it benefits the teacher, the students, and society. Kindness, niceness, caring, and benevolence are interrelated but not synonymous. We outline four progressive levels of kindness: conditional, superficial, optimal, and genuine. Blending mathematics teaching and kindness effectively requires the teacher to decenter from their own perspectives and adopt the student’s perspective as the student …

The Roles Of Mathematical Metaphors And Gestures In The Understanding Of Abstract Mathematical Concepts, Omid Khatin-Zadeh, Zahra Eskandari, Danyal Farsani

Journal of Humanistic Mathematics

When a new mathematical idea is presented to students in terms of abstract mathematical symbols, they may have difficulty to grasp it. This difficulty arises because abstract mathematical symbols do not directly refer to concretely perceivable objects. But, when the same content is presented in the form of a graph or a gesture that depicts that graph, it is often much easier to grasp. The process of solving a complex mathematical problem can also be facilitated with the use of a graphical representation. Transforming a mathematical problem or concept into a graphical representation is a common problem solving strategy, and …

Success (Studying Underlying Characteristics Of Computing And Engineering Student Success) Survey: Non-Cognitive And Affective Profiles In Engineering And Computing Students At Utep (2018-2022), Sanga Kim, Christian Teran Lopez, Andres Segura, Gabriel Miki

Departmental Technical Reports (CS)

No abstract provided.

Gamesmanship In Modern Discovery Tech, Neel Guha, Peter Henderson, Diego A. Zambrano

Faculty Scholarship

This chapter explores the potential for gamesmanship in technology-assisted discovery. Attorneys have long embraced gamesmanship strategies in analog discovery, producing reams of irrelevant documents, delaying depositions, or interpreting requests in a hyper-technical manner. The new question, however, is whether machine learning technologies can transform gaming strategies. By now it is well known that technologies have reinvented the practice of civil litigation and, specifically, the extensive search for relevant documents in complex cases. Many sophisticated litigants use machine learning algorithms – under the umbrella of “Technology Assisted Review” (TAR) – to simplify the identification and production of relevant documents in discovery. …

Contrastive Learning Approach To Word-In-Context Task For Low-Resource Languages, Pei-Chi Lo, Yang-Yin Lee, Hsien-Hao Chen, Agus Trisnajaya Kwee, Ee-Peng Lim

Research Collection School Of Computing and Information Systems

Word in context (WiC) task aims to determine whether a target word’s occurrences in two sentences share the same sense. In this paper, we propose a Contrastive Learning WiC (CLWiC) framework to improve the learning of sentence/word representations and classification of target word senses in the sentence pair when performing WiC on lowresource languages. In representation learning, CLWiC trains a pre-trained language model’s ability to cope with lowresource languages using both unsupervised and supervised contrastive learning. The WiC classifier learning further finetunes the language model with WiC classification loss under two classifier architecture options, SGBERT and WiSBERT, which use single-encoder …

A Quantum Approach To Language Modeling, Constantijn Van Der Poel

Dissertations, Theses, and Capstone Projects

This dissertation consists of six chapters. . . Chapter 1: We introduce language modeling, outline the software used for this thesis, and discuss related work. Chapter 2: We will unpack the transition from classical to quantum probabilities, as well as motivate their use in building a model to understand language-like datasets. Chapter 3: We motivate the Motzkin dataset, the models we will be investigating, as well as the necessary algorithms to do calculations with them. Chapter 4: We investigate our models’ sensitivity to various hyperparameters. Chapter 5: We compare the performance and robustness of the models. Chapter 6: We conclude …

Enhanced Convolutional Neural Network For Non-Small Cell Lung Cancer Classification, Yahya Tashtoush, Rasha Obeidat, Abdallah Al-Shorman, Omar Darwish, Mohammad A. Al-Ramahi, Dirar Darweesh

Computer Information Systems Faculty Publications (Archived)

Lung cancer is a common type of cancer that causes death if not detected
early enough. Doctors use computed tomography (CT) images to diagnose
lung cancer. The accuracy of the diagnosis relies highly on the doctor's
expertise. Recently, clinical decision support systems based on deep learning
valuable recommendations to doctors in their diagnoses. In this paper, we
present several deep learning models to detect non-small cell lung cancer in
CT images and differentiate its main subtypes namely adenocarcinoma,
large cell carcinoma, and squamous cell carcinoma. We adopted standard
convolutional neural networks (CNN), visual geometry group-16 (VGG16),
and VGG19. Besides, we …

Legal Dispositionism And Artificially-Intelligent Attributions, Jerrold Soh

Research Collection Yong Pung How School Of Law

It is conventionally argued that because an artificially-intelligent (AI) system acts autonomously, its makers cannot easily be held liable should the system's actions harm. Since the system cannot be liable on its own account either, existing laws expose victims to accountability gaps and need to be reformed. Recent legal instruments have nonetheless established obligations against AI developers and providers. Drawing on attribution theory, this paper examines how these seemingly opposing positions are shaped by the ways in which AI systems are conceptualised. Specifically, folk dispositionism underpins conventional legal discourse on AI liability, personality, publications, and inventions and leads us towards …

The Application Of Graph Technology For Improving Entity Resolution Results In The Context Of Group Membership, Md Abdus Salam Siddique

Theses and Dissertations

The main objective of Entity resolution (ER) is to find duplicate records within the same data table from the same source or different data tables from various sources. A traditional pair-wise supervised entity resolution matching depends on pre-built rules for finding matched records. On the other hand, unsupervised or semisupervised also relies on pair-wise matching. In the maximum case, group membership is left behind for consideration. In this dissertation, I have discussed the design, implementation and evaluation of a graph-based entity resolution for group membership to enhance the pair-wise matching ER system. I have designed and implemented a pipeline for …

Artificial Intelligence, Basic Skills, And Quantitative Literacy, Gizem Karaali

Numeracy

The introduction in November 2022 of ChatGPT, a freely available language-based artificial intelligence, has led to concerns among some educators about the feasibility and benefits of teaching basic writing and critical thinking skills to students in the context of easily accessed, AI-based cheating mechanisms. As of now, ChatGPT can write pretty convincing student-level prose, but it is still not very good at answering quantitatively rich questions. Therefore, for the time being, the preceding concerns may not be shared by a large portion of the numeracy education community. However, as Google and WolframAlpha are definitely capable of answering standard and some …

National Development And The Sustainability Of Mining In The Atacama Desert, Chile, Dakota Soleil Osgood

Capstone Collection

As climate change continues to intensify on a global scale, efforts have been made to implement renewable energies and progressive technologies. These tools are critical in the shift towards a more sustainable practice, and yet analysis of localized impacts from the development of these mechanisms is inadequate. Chile has been and continues to be a leading country in mineral extraction, with an economic history founded in the mining industry. The establishment of mining in Chile as a progressive tool has aided the social and economic development of the nation. Consequences of mining extraction, however, include intensive environmental degradation, human rights …

Semantic Orientation Of Crosslingual Sentiments: Employment Of Lexicon And Dictionaries, Arslan Ali Raza, Asad Habib, Jawad Ashraf, Babar Shah, Fernando Moreira

All Works

Sentiment Analysis is a modern discipline at the crossroads of data mining and natural language processing. It is concerned with the computational treatment of public moods shared in the form of text over social networking websites. Social media users express their feelings in conversations through cross-lingual terms, intensifiers, enhancers, reducers, symbols, and Net Lingo. However, the generic Sentiment Analysis (SA) research lacks comprehensive coverage about such abstruseness. In particular, they are inapt in the semantic orientation of Crosslingual based code switching, capitalization and accentuation of opinionative text due to the lack of annotated corpora, computational resources, linguistic processing and inefficient …

Integrated Mrna Sequence Optimization Using Deep Learning, Haoran Gong, Jianguo Wen, Ruihan Luo, Yuzhou Feng, Jingjing Guo, Hongguang Fu, Xiaobo Zhou

Faculty, Staff and Student Publications

The coronavirus disease of 2019 pandemic has catalyzed the rapid development of mRNA vaccines, whereas, how to optimize the mRNA sequence of exogenous gene such as severe acute respiratory syndrome coronavirus 2 spike to fit human cells remains a critical challenge. A new algorithm, iDRO (integrated deep-learning-based mRNA optimization), is developed to optimize multiple components of mRNA sequences based on given amino acid sequences of target protein. Considering the biological constraints, we divided iDRO into two steps: open reading frame (ORF) optimization and 5' untranslated region (UTR) and 3'UTR generation. In ORF optimization, BiLSTM-CRF (bidirectional long-short-term memory with conditional random …

The View From Ventress - 2021-22 Academic Year, University Of Mississippi, College Of Liberal Arts

Liberal Arts Newsletters

News from the College of Liberal Arts

Safe Space: To Help Minimize Cyberbullying And Support Social Well-Being, Eiman Rana

CISLA Senior Integrative Projects

The perverseness of cyberbullying as a growing and serious form of abuse with the potential for harm among children and youth needs to be recognized. In a resource-limited setting such as South Asia where youth have very little access to counseling within schools, the implications for mental health should be recognized. This research study explores whether our youth is capable of using technology in the right way to minimize cyberbullying and support social well-being.

Index Terms - Cyberbullying, Social Well-being, User Experience Design, and Usability Study.

Self-Omics: A Self-Supervised Learning Framework For Multi-Omics Cancer Data, Sayed Hashim, Karthik Nandakumar, Mohammad Yaqub

Computer Vision Faculty Publications

We have gained access to vast amounts of multi-omics data thanks to Next Generation Sequencing. However, it is challenging to analyse this data due to its high dimensionality and much of it not being annotated. Lack of annotated data is a significant problem in machine learning, and Self-Supervised Learning (SSL) methods are typically used to deal with limited labelled data. However, there is a lack of studies that use SSL methods to exploit inter-omics relationships on unlabelled multi-omics data. In this work, we develop a novel and efficient pre-training paradigm that consists of various SSL components, including but not limited …

Novel Correlation Coefficients For Interval-Valued Fermatean Hesitant Fuzzy Sets With Pattern Recognition Application, İbrahi̇m Demi̇r

Turkish Journal of Mathematics

A combination of interval-valued Fermatean fuzzy sets with Fermatean hesitant fuzzy elements in the form of interval values is known as an interval-valued Fermatean hesitant fuzzy set. Since Fermatean hesitant fuzzy sets are effective instruments for representing more complex, ambiguous, and hazy information, interval-valued Fermatean hesitant fuzzy sets are expansions of these sets. This investigation will concentrate on four different types of correlation coefficients for Fermatean hesitant fuzzy sets and expand them to include correlation coefficients and weighted correlation coefficients for interval-valued Fermatean hesitant fuzzy sets. Finally, the numerical examples demonstrate the viability and usefulness of the suggested methodologies in …

Encryption And Compression Classification Of Internet Of Things Traffic, Mariam Najdat M Saleh

Browse all Theses and Dissertations

The Internet of Things (IoT) is used in many fields that generate sensitive data, such as healthcare and surveillance. Increased reliance on IoT raised serious information security concerns. This dissertation presents three systems for analyzing and classifying IoT traffic using Deep Learning (DL) models, and a large dataset is built for systems training and evaluation. The first system studies the effect of combining raw data and engineered features to optimize the classification of encrypted and compressed IoT traffic using Engineered Features Classification (EFC), Raw Data Classification (RDC), and combined Raw Data and Engineered Features Classification (RDEFC) approaches. Our results demonstrate …

Maple: Multi-Modal Prompt Learning, Muhammad Uzair Khattak, Hanoona Rasheed, Muhammad Maaz, Salman Khan, Fahad Shahbaz Khan

Computer Vision Faculty Publications

Pre-trained vision-language (V-L) models such as CLIP have shown excellent generalization ability to downstream tasks. However, they are sensitive to the choice of input text prompts and require careful selection of prompt templates to perform well. Inspired by the Natural Language Processing (NLP) literature, recent CLIP adaptation approaches learn prompts as the textual inputs to fine-tune CLIP for downstream tasks. We note that using prompting to adapt representations in a single branch of CLIP (language or vision) is sub-optimal since it does not allow the flexibility to dynamically adjust both representation spaces on a downstream task. In this work, we …

Genealogical Relationship Extraction From Unstructured Text Using Fine-Tuned Transformer Models, Lubomir Stanchev, Carloangello Parrolivelli

Computer Science and Software Engineering

The paper tackles the task of extracting genealogical relationships, such as “sibling-of”, “parent-of”, “child-of”, and “spouse-of”, from unstructured, free-form text. In order to solve the problem, we propose a three-stage pipeline consisting of Named Entity Recognition (NER), Coreference Resolution (CR), and Relationship Classification (RC). NER identifies tokens in the text that refer to people, such as proper nouns or nicknames, using the SpaCy software. CR maps multiple tokens representing pronouns to their antecedents. For example, CR could map “She”, “His sister”, and “Maria” to the antecedent “Maria Johnson”. CR allows us to transform a genealogical relationship between two tokens, such …

Simulating The Machine Translation Of Low-Resource Languages By Designing A Translator Between English And An Artificially Constructed Language, Michaela Snyder

Mahurin Honors College Capstone Experience/Thesis Projects

Natural language processing (NLP), or the use of computers to analyze natural language, is a field that relies heavily on syntax. It would seem intuitive that computers would thrive in this area due to their strict syntax requirements, but the syntax of natural languages leaves them unable to properly parse and generate sentences that seem normal to the average speaker. A subfield of NLP, machine translation, works mainly to computerize translation between different languages. Unfortunately, such translation is not without its weaknesses; language documentation is not created equal, and many low-resource languages—languages with relatively few kinds of documentation, most often …

Multimodal Emotion Analysis With Focused Attention, Siddhi Kiran Bajracharya

Dissertations and Theses

Emotion analysis, a subset of sentiment analysis, involves the study of a wide array of emotional indicators. In contrast to sentiment analysis, which restricts its focus to positive and negative sentiments, emotion analysis extends beyond these limitations to a diverse spectrum of emotional cues. Contemporary trends in emotion analysis lean toward multimodal approaches that leverage audiovisual and text modalities. However, implementing multimodal strategies introduces its own set of challenges, marked by a rise in model complexity and an expansion of parameters, thereby creating a need for a larger volume of data. This thesis responds to this challenge by proposing a …

Exploring Transformers As Compact, Data-Efficient Language Models, Clayton Fields, Casey Kennington

Computer Science Faculty Publications and Presentations

Large scale transformer models, trained with massive datasets have become the standard in natural language processing. The huge size of most transformers make research with these models impossible for those with limited computational resources. Additionally, the enormous pretraining data requirements of transformers exclude pretraining them with many smaller datasets that might provide enlightening results. In this study, we show that transformers can be significantly reduced in size, with as few as 5.7 million parameters, and still retain most of their downstream capability. Further we show that transformer models can retain comparable results when trained on human-scale datasets, as few as …

Data-Driven Strategies For Pain Management In Patients With Sickle Cell Disease, Swati Padhee

Browse all Theses and Dissertations

This research explores data-driven AI techniques to extract insights from relevant medical data for pain management in patients with Sickle Cell Disease (SCD). SCD is an inherited red blood cell disorder that can cause a multitude of complications throughout an individual’s life. Most patients with SCD experience repeated, unpredictable episodes of severe pain. Arguably, the most challenging aspect of treating pain episodes in SCD is assessing and interpreting the patient’s pain intensity level due to the subjective nature of pain. In this study, we leverage multiple data-driven AI techniques to improve pain management in patients with SCD. The proposed approaches …