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A Development Of Disaster Risk Profile In Public Healthcare System During Flood Situation : A Case Study Of Nakhon Sawan City Municipality, Nakhon Sawan Province, Thailand, Kodchakorn Krutphong Jan 2021

A Development Of Disaster Risk Profile In Public Healthcare System During Flood Situation : A Case Study Of Nakhon Sawan City Municipality, Nakhon Sawan Province, Thailand, Kodchakorn Krutphong

Chulalongkorn University Theses and Dissertations (Chula ETD)

This research begins with the idea of the disaster risk assessment included in the disaster management’s well recognized international framework, the Sendai Framework for Disaster Risk Reduction. Then, the idea settles from the risk assessment concept combined with the emergency management knowledge that has the critical infrastructure topic, including the public healthcare system. The flood disaster is the kind of disaster that frequently occurs in Thailand and the study area, Nakhon Sawan City Municipality. Thus, this research aims to study disaster risk profiles in the public healthcare system in a specific local area. The outcome from this research is the …


"Who Can Help Me?'': Knowledge Infused Matching Of Support Seekers And Support Providers During Covid-19 On Reddit, Manas Gaur, Kaushik Roy, Aditya Sharma, Biplav Srivastava, Amit Sheth Jan 2021

"Who Can Help Me?'': Knowledge Infused Matching Of Support Seekers And Support Providers During Covid-19 On Reddit, Manas Gaur, Kaushik Roy, Aditya Sharma, Biplav Srivastava, Amit Sheth

Publications

During the ongoing COVID-19 crisis, subreddits on Reddit, such as r/Coronavirus saw a rapid growth in user's requests for help (support seekers - SSs) including individuals with varying professions and experiences with diverse perspectives on care (support providers - SPs). Currently, knowledgeable human moderators match an SS with a user with relevant experience, i.e, an SP on these subreddits. This unscalable process defers timely care. We present a medical knowledge-infused approach to efficient matching of SS and SPs validated by experts for the users affected by anxiety and depression, in the context of with COVID-19. After matching, each SP to …


Kynurenic Acid May Underlie Sex-Specific Immune Responses To Covid-19, Yuping Cai, Daniel J. Kim, Takehiro Takahashi, David I. Broadhurst, Hong Yan, Shuangge Ma, Nicholas J. W. Rattray, Arnau Casanovas-Massana, Benjamin Israelow, Jon Klein, Carolina Lucas, Tianyang Mao, Adam J. Moore, M. Catherine Muenker, Ji Eun Oh, Julio Silva, Patrick Wong, Albert I. Ko, Sajid A. Khan, Akiko Iwasaki, Caroline H. Johnson, Yale Impact Research Team Jan 2021

Kynurenic Acid May Underlie Sex-Specific Immune Responses To Covid-19, Yuping Cai, Daniel J. Kim, Takehiro Takahashi, David I. Broadhurst, Hong Yan, Shuangge Ma, Nicholas J. W. Rattray, Arnau Casanovas-Massana, Benjamin Israelow, Jon Klein, Carolina Lucas, Tianyang Mao, Adam J. Moore, M. Catherine Muenker, Ji Eun Oh, Julio Silva, Patrick Wong, Albert I. Ko, Sajid A. Khan, Akiko Iwasaki, Caroline H. Johnson, Yale Impact Research Team

Research outputs 2014 to 2021

Coronavirus disease 2019 (COVID-19) has poorer clinical outcomes in males than in females, and immune responses underlie these sex-related differences. Because immune responses are, in part, regulated by metabolites, we examined the serum metabolomes of COVID-19 patients. In male patients, kynurenic acid (KA) and a high KA–to–kynurenine (K) ratio (KA:K) positively correlated with age and with inflammatory cytokines and chemokines and negatively correlated with T cell responses. Males that clinically deteriorated had a higher KA:K than those that stabilized. KA inhibits glutamate release, and glutamate abundance was lower in patients that clinically deteriorated and correlated with immune responses. Analysis of …


Analyzing Electronic Health Records With Time-To-Event Endpoints: Propensity Scores And Semiparametric Approaches, Jonathan W. Yu Jan 2021

Analyzing Electronic Health Records With Time-To-Event Endpoints: Propensity Scores And Semiparametric Approaches, Jonathan W. Yu

Theses and Dissertations

For analyzing large electronic health records (EHR) with time-to-event endpoints, such as in kidney transplantation, a major challenge is to provide an accurate risk analyses, while accounting for a multitude of epidemiological and statistical complexities. Motivated by a right-censored kidney transplantation EHR dataset derived from the United Network of Organ Sharing (UNOS), this dissertation, through a culmination of two interrelated yet distinctly different projects, focuses on developments of novel statistical procedures and methodologies to address some pressing issues arising in EHR-based research. In the first project, we aim to decouple the causal effects of treatments (here, studying subgroups, such as …


Biochemical Assay Invariant Attestation For The Security Of Cyber-Physical Digital Microfluidic Biochips, Fredrick Eugene Love Ii Jan 2021

Biochemical Assay Invariant Attestation For The Security Of Cyber-Physical Digital Microfluidic Biochips, Fredrick Eugene Love Ii

Masters Theses

“Due to the devastating global impact that infectious diseases have had, especially in developing countries, the demand for access to adequate resources to combat sickness continues to be a heavy burden. Reliable and affordable diagnostics is a vital first line of defense in fighting outbreaks and providing accurate treatment. Digital microfluidics biochips capable of running multiple diagnostic tests on a single platform are an emerging technology that are increasingly being evaluated as a viable platform for rapid diagnosis and point-of-care field deployment. Although these systems offer many benefits, processing errors are inherent. Therefore, cyber-physical digital biochips are being investigated that …


Analysis Of Intervention Effectiveness Using Early Outbreak Transmission Dynamics To Guide Future Pandemic Management And Decision-Making In Kuwait, Michael G. Tyshenko, Tamer Oraby, Joseph C. Longenecker, Harri Vainio, Janvier Gasana, Walid Q. Alali, Mohammad Alseaidan, Susie Elsaadany, Mustafa Al-Zoughool Jan 2021

Analysis Of Intervention Effectiveness Using Early Outbreak Transmission Dynamics To Guide Future Pandemic Management And Decision-Making In Kuwait, Michael G. Tyshenko, Tamer Oraby, Joseph C. Longenecker, Harri Vainio, Janvier Gasana, Walid Q. Alali, Mohammad Alseaidan, Susie Elsaadany, Mustafa Al-Zoughool

School of Mathematical & Statistical Sciences Faculty Publications

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is a World Health Organization designated pandemic that can result in severe symptoms and death that disproportionately affects older patients or those with comorbidities. Kuwait reported its first imported cases of COVID-19 on February 24, 2020. Analysis of data from the first three months of community transmission of the COVID-19 outbreak in Kuwait can provide important guidance for decision-making when dealing with future SARS-CoV-2 epidemic wave management. The analysis of intervention scenarios can help to evaluate the possible impacts of various outbreak control measures going forward which aim to reduce the effective reproduction …


Grappling With Covid-19 By Imposing And Lifting Nonpharmaceutical Interventions In Sri Lanka: A Modeling Perspective, Mahesh Jayaweera, Chamath Dannongoda, Dilum Dilshan, Janith Dissanayake, Hasini Perera, Jagath Manatunge, Buddhika Gunawardana Jan 2021

Grappling With Covid-19 By Imposing And Lifting Nonpharmaceutical Interventions In Sri Lanka: A Modeling Perspective, Mahesh Jayaweera, Chamath Dannongoda, Dilum Dilshan, Janith Dissanayake, Hasini Perera, Jagath Manatunge, Buddhika Gunawardana

Physics & Astronomy Faculty Publications

The imposition and lifting of non-pharmaceutical interventions (NPIs) to avert the COVID19 pandemic have gained popularity worldwide and will continue to be enforced until herd immunity is achieved. We developed a linear regression model to ascertain the nexus between the time-varying reproduction number averaged over a time window of six days (Rts) and seven NPIs: contact tracing, quarantine efforts, social distancing and health checks, hand hygiene, wearing of facemasks, lockdown and isolation, and health-related supports. Our analysis suggests that the second wave that emerged in Sri Lanka in early October 2020 continued despite numerous NPIs. The model indicates that the …


Rfid Adaption In Healthcare Organizations: An Integrative Framework, Ahed Abugabah, Louis Sanzogni, Luke Houghton, Ahmad Ali Alzubi, Alaa Abuqabbeh Jan 2021

Rfid Adaption In Healthcare Organizations: An Integrative Framework, Ahed Abugabah, Louis Sanzogni, Luke Houghton, Ahmad Ali Alzubi, Alaa Abuqabbeh

All Works

Radio frequency identification (RFID), also known as electronic label technology, is a non-contact automated identification technology that recognizes the target object and extracts relevant data and critical characteristics using radio frequency signals. Medical equipment information management is an important part of the construction of a modern hospital, as it is linked to the degree of diagnosis and care, as well as the hospital's benefits and growth. The aim of this study is to create an integrated view of a theoretical framework to identify factors that influence RFID adoption in healthcare, as well as to conduct an empirical review of the …


Bayesian-Derived Vancomycin Auc24h Threshold For Nephrotoxicity In Special Populations, Dan Ho Jan 2021

Bayesian-Derived Vancomycin Auc24h Threshold For Nephrotoxicity In Special Populations, Dan Ho

University of the Pacific Theses and Dissertations

A Bayesian-derived 24-hour area under the concentration-time curve over minimum inhibitory concentration from broth microdilution (AUC24h/MICBMD) ratio of 400 to 600 is recommended as the new monitoring parameter for vancomycin to optimize efficacy and minimize nephrotoxicity. The AUC24h threshold of 600 mg*h/L for nephrotoxicity was extrapolated from studies that assessed the general population. It is unclear if this upper threshold is consistent or varies when used in special populations such as critically ill patients, obese patients, patients with preexisting renal disease, and patients on concomitant nephrotoxins.The purpose of this study is to investigate the generalizability of the proposed vancomycin AUC24h …


Analysis Of Subtelomeric Rextal Assemblies Using Quast, Tunazzina Islam, Desh Ranjan, Mohammad Zubair, Eleanor Young, Ming Xiao, Harold Riethman Jan 2021

Analysis Of Subtelomeric Rextal Assemblies Using Quast, Tunazzina Islam, Desh Ranjan, Mohammad Zubair, Eleanor Young, Ming Xiao, Harold Riethman

Computer Science Faculty Publications

Genomic regions of high segmental duplication content and/or structural variation have led to gaps and misassemblies in the human reference sequence, and are refractory to assembly from whole-genome short-read datasets. Human subtelomere regions are highly enriched in both segmental duplication content and structural variations, and as a consequence are both impossible to assemble accurately and highly variable from individual to individual. Recently, we developed a pipeline for improved region-specific assembly called Regional Extension of Assemblies Using Linked-Reads (REXTAL). In this study, we evaluate REXTAL and genome-wide assembly (Supernova) approaches on 10X Genomics linked-reads data sets partitioned and barcoded using the …


Risk Factors For Foodborne Illness Outbreaks In Retail Food Establishments, Brendalee Viveiros Jan 2021

Risk Factors For Foodborne Illness Outbreaks In Retail Food Establishments, Brendalee Viveiros

Walden Dissertations and Doctoral Studies

Despite policies and interventions over the last two decades, foodborne illness remains a significant public health concern. According to the CDC’s Foodborne Disease Outbreak Surveillance System, 60% of reported foodborne illness outbreaks involved food that was prepared at a restaurant. Reducing foodborne illness outbreaks that occur at restaurants would have a significant impact on the overall number of foodborne illnesses that occur each year. The purpose of this study was to quantitatively analyze the differences in risk factors in food establishments that have had a foodborne illness outbreak compared to food establishments that have not. This study used Reckwitz’s theory …


Matters Of Biocybersecurity With Consideration To Propaganda Outlets And Biological Agents, Xavier-Lewis Palmer, Ernestine Powell, Lucas Potter, Thaddeus Eze (Ed.), Lee Speakman (Ed.), Cyril Onwubiko (Ed.) Jan 2021

Matters Of Biocybersecurity With Consideration To Propaganda Outlets And Biological Agents, Xavier-Lewis Palmer, Ernestine Powell, Lucas Potter, Thaddeus Eze (Ed.), Lee Speakman (Ed.), Cyril Onwubiko (Ed.)

Electrical & Computer Engineering Faculty Publications

The modern era holds vast modalities in human data utilization. Within Biocybersecurity (BCS), categories of biological information, especially medical information transmitted online, can be viewed as pathways to destabilize organizations. Therefore, analysis of how the public, along with medical providers, process such data, and the methods by which false information, particularly propaganda, can be used to upset the flow of verified information to populations of medical professionals, is important for maintenance of public health. Herein, we discuss some interplay of BCS within the scope of propaganda and considerations for navigating the field.


Predator Scent And Presence Alter Mammal Assemblages In The Missouri Ozarks, Usa, Cara Jean Yocom-Russell Jan 2021

Predator Scent And Presence Alter Mammal Assemblages In The Missouri Ozarks, Usa, Cara Jean Yocom-Russell

Masters Theses

"Species that are vulnerable to predation exhibit a host of behavioral and physiological adaptations toward the avoidance of this outcome: Heightened awareness of surroundings through visual, olfactory, and auditory senses are common ways in which these species avoid detection by predators. While links between direct predator-prey relationships are well established, less is known about how predators can shape overall community structure or the populations of secondary or less frequently consumed prey items. As humans expand into rural areas, the frequency of wildlife conflicts rises. In response, humans look to prevent these events with a variety of methods. One such method …


Dietary Flexibility Of Wood Storks In Response To Human-Induced Rapid Environmental Change, Betsy A. Evans, Jessica A. Klassen, Dale E. Gawlik Jan 2021

Dietary Flexibility Of Wood Storks In Response To Human-Induced Rapid Environmental Change, Betsy A. Evans, Jessica A. Klassen, Dale E. Gawlik

United States Department of Agriculture Wildlife Services: Staff Publications

Human-induced rapid environmental change (HIREC) has altered landscape processes and negatively impacted many species globally. Some of the most dramatic changes have been in wetlands where flows have been disrupted, and new wetlands have been created to retain runoff. In response to disrupted natural wetland conditions, Wood Stork (Mycteria americana) populations in South Florida have significantly declined over the past several decades. Despite the well-documented sensitivity of Wood Storks to natural wetland conditions, Wood Storks are often observed foraging in roadside created wetlands; however, the availability of prey in created wetlands is currently unknown. We sampled natural and created wetlands …


Space Use In Free-Ranging Canids: Are Gonadal Hormones Required For Territory Maintenance?, Eric M. Gese, Patricia A. Terletzky Jan 2021

Space Use In Free-Ranging Canids: Are Gonadal Hormones Required For Territory Maintenance?, Eric M. Gese, Patricia A. Terletzky

United States Department of Agriculture Wildlife Services: Staff Publications

Fertility control among carnivores has been used to reduce depredations on livestock and wild neonates, population control, modify behavior, inhibit genetic introgression, and reduce human–wildlife conflicts. Although there is considerable knowledge on techniques to sterilize carnivores, there is little information concerning how the absence of gonadal hormones influences behavior, space use, and survival of wild canids. We examined territorial fidelity, home-range size and overlap, and survival of 179 surgically sterilized free-ranging canids (124 coyotes (Canis latrans Say, 1823), 55 coyote – red wolf (Canis rufus Audubon and Bachman, 1851) hybrids) with gonadal hormones present (tubal-ligated females (n = 70), vasectomized …


Social Structure Defines Spatial Transmission Of African Swine Fever In Wild Boar, Kim M. Pepin, Andrew J. Golnar, Tomasz Podgórski Jan 2021

Social Structure Defines Spatial Transmission Of African Swine Fever In Wild Boar, Kim M. Pepin, Andrew J. Golnar, Tomasz Podgórski

United States Department of Agriculture Wildlife Services: Staff Publications

The spatial spread of infectious disease is determined by spatial and social processes such as animal space use and family group structure. Yet, the impacts of social processes on spatial spread remain poorly understood and estimates of spatial transmission kernels (STKs) often exclude social structure. Understanding the impacts of social structure on STKs is important for obtaining robust inferences for policy decisions and optimizing response plans. We fit spatially explicit transmission models with different assumptions about contact structure to African swine fever virus surveillance data from eastern Poland from 2014 to 2015 and evaluated how social structure affected inference of …


Social Identity And Acceptability Of Wild Pig (Sus Scrofa) Control Actions: A Case Study Of Texas Hunters, Lauren Jaebker, Tara L. Teel, Alan D. Bright, Hailey E. Mclean, John M. Tomeček, Maureen G. Frank, Rachael L. Connally, Stephanie A. Shwiff, Keith M. Carlisle Jan 2021

Social Identity And Acceptability Of Wild Pig (Sus Scrofa) Control Actions: A Case Study Of Texas Hunters, Lauren Jaebker, Tara L. Teel, Alan D. Bright, Hailey E. Mclean, John M. Tomeček, Maureen G. Frank, Rachael L. Connally, Stephanie A. Shwiff, Keith M. Carlisle

United States Department of Agriculture Wildlife Services: Staff Publications

Wild pigs (Sus scrofa) pose significant challenges to wildlife managers. This research explored Texas hunters’ acceptability of wild pig control actions, and whether acceptability varied according to hunters’ affiliation with four different categories of natural resource organizations as an indicator of social identity. Results of a survey (n = 37,317) revealed that most hunters were accepting of all control actions except toxicants and non-lethal deterrents. Mean acceptability scores for each action differed significantly across the four affiliation categories, but effect sizes were minimal. Hunters affiliated with agricultural organizations were the most accepting of control actions, while hunters with …


Influenza A Virus Surveillance, Infection And Antibody Persistence In Snow Geese (Anser Caerulescens), Susan A. Shriner, J. Jeffrey Root, Jeremy W. Ellis, Kevin T. Bentler, Kaci K. Vandalen, Thomas Gidlewski, Sarah N. Bevins Jan 2021

Influenza A Virus Surveillance, Infection And Antibody Persistence In Snow Geese (Anser Caerulescens), Susan A. Shriner, J. Jeffrey Root, Jeremy W. Ellis, Kevin T. Bentler, Kaci K. Vandalen, Thomas Gidlewski, Sarah N. Bevins

United States Department of Agriculture Wildlife Services: Staff Publications

Some snow geese (Anser caerulescens) migrate between Eurasia and North America and exhibit high seroprevalence for influenza A viruses (IAVs). Hence, these birds might be expected to play a role in intercontinental dispersal of IAVs. Our objective in this manuscript was to characterize basic incidence and infection characteristics for snow geese to assess whether these birds are likely to significantly contribute to circulation of IAVs. Thus, we 1) estimated snow goose infection prevalence by summarizing > 5,000 snow goose surveillance records, 2) experimentally infected snow geese with a low pathogenic IAV (H4N6) to assess susceptibility and infection dynamics and …


Occurrence Of Mesocarnivores In Montane Sky Islands: How Spatial And Temporal Overlap Informs Rabies Management In A Regional Hotspot, Amanda M. Veals, John Koprowski, David L. Bergman, Kurt C. Vercauteren, David B. Wester Jan 2021

Occurrence Of Mesocarnivores In Montane Sky Islands: How Spatial And Temporal Overlap Informs Rabies Management In A Regional Hotspot, Amanda M. Veals, John Koprowski, David L. Bergman, Kurt C. Vercauteren, David B. Wester

United States Department of Agriculture Wildlife Services: Staff Publications

Interspecific interactions among mesocarnivores can influence community dynamics and resource partitioning. Insights into these interactions can enhance understanding of local ecological processes that have impacts on pathogen transmission, such as the rabies lyssavirus. Host species ecology can provide an important baseline for disease management strategies especially in biologically diverse ecosystems and heterogeneous landscapes. We used a mesocarnivore guild native to the southwestern United States, a regional rabies hotspot, that are prone to rabies outbreaks as our study system. Gray foxes (Urocyon cinereoargenteus), striped skunks (Mephitis mephitis), bobcats (Lynx rufus), and coyotes (Canis latrans) share large portions of their geographic ranges …


Sars-Cov-2 Exposure In Wild White-Tailed Deer (Odocoileus Virginianus), Jeffrey C. Chandler, Sarah N. Bevins, Jeremy W. Ellis, Timothy J. Linder, Rachel M. Tell, Melinda Jenkins-Moore, J. Jeffrey Root, Julianna B. Lenoch, Suelee Robbe-Austerman, Thomas J. Deliberto, Tom Gidlewski, Mia Kim Torchetti, Susan A. Shriner Jan 2021

Sars-Cov-2 Exposure In Wild White-Tailed Deer (Odocoileus Virginianus), Jeffrey C. Chandler, Sarah N. Bevins, Jeremy W. Ellis, Timothy J. Linder, Rachel M. Tell, Melinda Jenkins-Moore, J. Jeffrey Root, Julianna B. Lenoch, Suelee Robbe-Austerman, Thomas J. Deliberto, Tom Gidlewski, Mia Kim Torchetti, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Widespread human SARS-CoV-2 infections combined with human–wildlife interactions create the potential for reverse zoonosis from humans to wildlife. We targeted white-tailed deer (Odocoileus virginianus) for serosurveillance based on evidence these deer have angiotensin-converting enzyme 2 receptors with high affinity for SARS-CoV-2, are permissive to infection, exhibit sustained viral shedding, can transmit to conspecifics, exhibit social behavior, and can be abundant near urban centers. We evaluated 624 prepandemic and postpandemic serum samples from wild deer from four US states for SARS-CoV-2 exposure. Antibodies were detected in 152 samples (40%) from 2021 using a surrogate virus neutralization test. A subset of samples …


Detection Of Two Dissimilar Chronic Wasting Disease Isolates In Two Captive Rocky Mountain Elk (Cervus Canadensis) Herds: Two Distinctive Chronic Wasting Disease Isolates Identified In Captive Elk, Tracy A. Nichols, Eric M. Nicholson, Yihui Liu, Wanyin Tao, Terry R. Spraker, Michael Lavelle, Justin W. Fischer, Qingzhong Kong, Kurt C. Vercauteren Jan 2021

Detection Of Two Dissimilar Chronic Wasting Disease Isolates In Two Captive Rocky Mountain Elk (Cervus Canadensis) Herds: Two Distinctive Chronic Wasting Disease Isolates Identified In Captive Elk, Tracy A. Nichols, Eric M. Nicholson, Yihui Liu, Wanyin Tao, Terry R. Spraker, Michael Lavelle, Justin W. Fischer, Qingzhong Kong, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Chronic wasting disease (CWD) continues to spread in both wild and captive cervid herds in North America and has now been identified in wild reindeer and moose in Norway, Finland and Sweden. There is limited knowledge about the variety and characteristics of isolates or strains of CWD that exist in the landscape and their implications on wild and captive cervid herds. In this study, we evaluated brain samples from two captive elk herds that had differing prevalence, history and timelines of CWD incidence. Site 1 had a 16-year history of CWD with a consistently low prevalence between 5% and 10%. …


Environmental Dna For Conservation, Antoinette J. Piaggio Jan 2021

Environmental Dna For Conservation, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Biodiversity must be documented before it can be conserved. However, it may be difficult to document species with few individuals (Thompson, 2013; Goldberg et al., 2016), thus it requires a multitude of tools to detect species that occur in low numbers or are elusive (see the various chapters in this volume). One tool that has become useful for conservation efforts utilizes environmental DNA, which is DNA shed into the environment by organisms (eDNA; Taberlet et al., 2018). Typically this involves taking environmental samples such as soil, water, air, or using biological surrogates for sampling biodiversity (e.g. leeches, sponges, carrion flies, …


Allometric Regression Of Snake Body Length From Head Image Measurements, Shane R. Siers Jan 2021

Allometric Regression Of Snake Body Length From Head Image Measurements, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

As in many fields of wildlife research and management, camera devices and photogrammetry have become an integral part of the toolkit for exploring otherwise‐unseen aspects of the biology, behavior, and control of the invasive brown treesnake (Boiga irregularis) on Guam. Because brown treesnakes are cryptic and nocturnal, and nearly all aspects of their ecology are influenced by snake size, methods are needed to estimate snake size from images captured by infrared wildlife cameras. Unfortunately, it is difficult to capture images of an entire snake’s length at a controlled distance from a simple camera setup. Here, I describe the …


Increased Abundance Of The Common Raven Within The Ranges Of Greater And Gunnison Sage-Grouse: Influence Of Anthropogenic Subsidies And Fire, Jonathan B. Dinkins, Lindsey R. Perry, Jeffrey L. Beck, Jimmy D. Taylor Jan 2021

Increased Abundance Of The Common Raven Within The Ranges Of Greater And Gunnison Sage-Grouse: Influence Of Anthropogenic Subsidies And Fire, Jonathan B. Dinkins, Lindsey R. Perry, Jeffrey L. Beck, Jimmy D. Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

The common raven (Corvus corax; raven) is native to North America and has increased in abundance, especially throughout western North America, during the last century. Human subsidies have facilitated raven dispersal into less suitable habitats and enabled these populations to maintain higher annual survival and reproduction. Concomitantly, overabundant raven populations are impacting other native at-risk species such as the greater sage-grouse (Centrocercus urophasianus) and potentially the Gunnison sage-grouse (C. minimus). Using Breeding Bird Survey data from 1995–2014, we evaluated raven count data to quantitatively describe changes in abundance and expansion into sagebrush ( …


A Novel Technique To Improve Capture Success Of Common Ravens, Lindsey R. Perry, Terrah M. Owens, Zachary T. Slick, Jimmy Taylor, Jonathan B. Dinkins Jan 2021

A Novel Technique To Improve Capture Success Of Common Ravens, Lindsey R. Perry, Terrah M. Owens, Zachary T. Slick, Jimmy Taylor, Jonathan B. Dinkins

United States Department of Agriculture Wildlife Services: Staff Publications

Traditional trapping techniques for common ravens (Corvus corax; raven) require significant effort, often produce low capture rates, and cannot be used in some situations. We designed a 3-m noose pole to secure ravens from nocturnal roost locations while using a strobe spotlight to temporarily disorient them. We collected measures of trapping efficiency and contrasted them with padded leghold traps also used in the study. We effectively implemented our noose pole method in July and August of 2018, 2019, and 2020 in the Baker and Cow Lakes sage-grouse (Centrocercus urophasianus) Priority Areas of Conservation in eastern Oregon, USA, which yielded trapping …


Evidence For Continental-Scale Dispersal Of Antimicrobial Resistant Bacteria By Landfill-Foraging Gulls, Christina A. Ahlstrom, Mariëlle L. Van Toor, Hanna Woksepp, Jeffrey C. Chandler, John A. Reed, Andrew B. Reeves, Jonas Waldenström, Alan B. Franklin, David C. Douglas, Jonas Bonnedahl, Andrew M. Ramey Jan 2021

Evidence For Continental-Scale Dispersal Of Antimicrobial Resistant Bacteria By Landfill-Foraging Gulls, Christina A. Ahlstrom, Mariëlle L. Van Toor, Hanna Woksepp, Jeffrey C. Chandler, John A. Reed, Andrew B. Reeves, Jonas Waldenström, Alan B. Franklin, David C. Douglas, Jonas Bonnedahl, Andrew M. Ramey

United States Department of Agriculture Wildlife Services: Staff Publications

Anthropogenic inputs into the environment may serve as sources of antimicrobial resistant bacteria and alter the ecology and population dynamics of synanthropic wild animals by providing supplemental forage. In this study, we used a combination of phenotypic and genomic approaches to characterize antimicrobial resistant indicator bacteria, animal telemetry to describe host movement patterns, and a novel modeling approach to combine information fromthese diverse data streams to investigate the acquisition and long-distance dispersal of antimicrobial resistant bacteria by landfill-foraging gulls. Our results provide evidence that gulls acquire antimicrobial resistant bacteria from anthropogenic sources, which they may subsequently disperse across and between …


Spatial Transferability Of Expert Opinion Models For American Beaver Habitat, Isidro Barela, Leslie M. Burger, Guiming Wang, Kristine O. Evans, Qingmin Meng, Jimmy D. Taylor Jan 2021

Spatial Transferability Of Expert Opinion Models For American Beaver Habitat, Isidro Barela, Leslie M. Burger, Guiming Wang, Kristine O. Evans, Qingmin Meng, Jimmy D. Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

Species distribution models and habitat suitability models (HSMs) have become a popular tool in the conservation of biodiversity. However, the ability to predict species spatial distributions at sites beyond the data source sites (i.e., spatial transferability) is critical for the applications of HSMs in the management and conservation of rare or endangered species. The main objective of our study was to assess the predictive performance and spatial transferability of expert opinion models (EOMs). To build EOMs, we identified through extensive literature reviews 17 key landscape variables to characterize habitat use by American beaver (Castor canadensis). We developed 31 pairwise opinion …


Food Habits Of Wintering Double-Crested Cormorants In The Mississippi Delta, Terrel W. Christie, Brian S. Dorr, J. Brian Davis, Luke A. Roy, Carole R. Engle, Katie Hanson-Dorr, Anita M. Kelly Jan 2021

Food Habits Of Wintering Double-Crested Cormorants In The Mississippi Delta, Terrel W. Christie, Brian S. Dorr, J. Brian Davis, Luke A. Roy, Carole R. Engle, Katie Hanson-Dorr, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Given its ubiquity, it is not surprising that agriculture, including fin fish aquaculture, contributes to food webs worldwide and is used by numerous wildlife for foraging and meeting other needs. Double-crested Cormorants (Phalacrocorax auritus) impact United States commercial aquaculture and are considered the primary avian predator in catfish (Ictalurus spp.) aquaculture facilities in the Mississippi Delta. Recent changes in aquaculture practices, regulatory policies, and decreased overall hectares in production prompted this study that assessed cormorant consumption of catfish in relation to their night roosts through surveys and diet analysis. Cormorants were collected from night roosts from October …


Population Genomic Transformations Induced By Isolation Of Wild Bird Avian Influenza Viruses (Orthomyxoviridae) In Embryonated Chicken Eggs, Matthew W. Hopken, Antoinette J. Piaggio, K. L. Pabilonia, James Pierce, Theodore Anderson, Courtney Pierce, Zaid Abdo Jan 2021

Population Genomic Transformations Induced By Isolation Of Wild Bird Avian Influenza Viruses (Orthomyxoviridae) In Embryonated Chicken Eggs, Matthew W. Hopken, Antoinette J. Piaggio, K. L. Pabilonia, James Pierce, Theodore Anderson, Courtney Pierce, Zaid Abdo

United States Department of Agriculture Wildlife Services: Staff Publications

Isolation and cultivation of wild-type viruses in model organism cells or tissues is standard practice in virology. Oftentimes, the virus host species is distantly related to the species from which the culture system was developed. Thus, virus culture in these tissues and cells basically constitutes a host jump, which can lead to genomic changes through genetic drift and/or adaptation to the culture system. We directly sequenced 70 avian influenza virus (Orthomyxoviridae) genomes from oropharyngeal/cloacal swabs collected from wild bird species and paired virus isolates propagated from the same samples following isolation in specific-pathogen-free embryonated chicken eggs. The data were analyzed …


Estimation Of Wildlife Damage From Federal Crop Insurance Data, Sophie Mckee, Stephanie A. Shwiff, Aaron M. Anderson Jan 2021

Estimation Of Wildlife Damage From Federal Crop Insurance Data, Sophie Mckee, Stephanie A. Shwiff, Aaron M. Anderson

United States Department of Agriculture Wildlife Services: Staff Publications

BACKGROUND: Wildlife damage to crops is a persistent and costly problem for many farmers in the USA. Most existing estimates of crop damage have relied on direct assessment methods such as field studies conducted by trained biologists or surveys distributed to farmers. In this paper, we describe a new method of estimating wildlife damage that exploits federal crop insurance data. We focused our study on four crops: corn, soybean, wheat, and cotton, chosen because of their economic importance and their vulnerability to wildlife damage.

RESULTS: We determined crop-raiding hot spots across the USA over the 2015–2019 period and identified the …