Digital Commons Network^™

Torque Teno Sus Virus 1: A Potential Surrogate Pathogen To Study Pig-Transmitted Transboundary Animal Diseases, Xiaolong Li, Brandon M. Parker, Raoul K. Boughton, James C. Beasley, Timothy J. Smyser, James D. Austin, Kim M. Pepin, Ryan S. Miller, Kurt C. Vercauteren, Samantha M. Wisely

United States Department of Agriculture Wildlife Services: Staff Publications

Understanding the epidemiology and transmission dynamics of transboundary animal diseases (TADs) among wild pigs (Sus scrofa) will aid in preventing the introduction or containment of TADs among wild populations. Given the challenges associated with studying TADs in free-ranging populations, a surrogate pathogen system may predict how pathogens may circulate and be maintained within wild free-ranging swine populations, how they may spill over into domestic populations, and how management actions may impact transmission. We assessed the suitability of Torque teno sus virus 1 (TTSuV1) to serve as a surrogate pathogen for molecular epidemiological studies in wild pigs by investigating …

Does Innovation Facilitate Meeting The Co2 Emission Reduction Targets Of China: A Non-Linear Approach, Yifan Wang, Nadia Doytch, Mohammed Elheddad, Wei Li, Mengna Chi

Ateneo School of Government Publications

China has been implementing energy efficiency and CO2 emission reduction schemes at the provincial level that have been embedded in the National Five Year Plans of the country. We set out to investigate the relationship between R&D expenditures and CO2 emissions in China at the province level in the context of the planned emissions reduction targets. We explore the possibility of the existence of a non-linear relationship between R&D expenditures and CO2 emissions with a non-parametric methodology, a fixed effect panel data quantile (FEQR) regression estimator applied to a panel of 30 provinces. We stratify the sample according to the …

Agricultural Groundcover Update December 2023, Justin Laycock

Natural resources published reports

Summary

• About 96% of the grainbelt had adequate vegetative groundcover (more than 50%) to prevent wind erosion in December 2023.
• In the northern half of the grainbelt, a larger-than-average area has 51–60% groundcover, which is expected to decrease to below 50% over the summer.
• Just under 4% of the grainbelt (553,000 ha) had less than 50% groundcover, which is inadequate to prevent wind erosion. West Midlands Ag Soil Zone had the highest risk of wind erosion and 11.4% of this farmland had inadequate groundcover.
• Less than 0.5% of the grainbelt had a high to very high risk of wind erosion …

Agriculture Against The Wall: Barriers And Opportunities For Agroecological Transitions In California’S Industrial Agricultural Landscapes, Estelí Jiménez-Soto, Madeleine Fairbairn, Joji Muramoto, Carol Shennan

School of Geosciences Faculty and Staff Publications

Agroecology emphasizes a shift from low diversity, high chemical input farming to more biodiverse agroecosystems cultivated in conjunction with natural ecosystem processes and embedded in socially just relationships. Yet achieving such agroecological transitions presents enormous challenges in industrial agricultural landscapes dominated by consolidation and overproduction. We examine both the challenges and the opportunities for agroecological transition in one particular industrial agricultural context: the fumigant-dependent strawberry production of California’s Central Coast. We do so by exploring adoption of Anaerobic Soil Disinfestation (ASD), an agroecological alternative to fumigation which has shown considerable promise but has been historically underutilized. Building on previously identified …

Glacial Deposits, Vol. 48, 2024, Department Of Geography, Geology, And The Environment

Glacial Deposits

Newsletter of the Department of Geography, Geology, and the Environment

Investigating Drought Response And Paleoclimate Potential Of A New Network Of White Oak Chronologies In Western Kentucky, Usa, Audrey J. Heichelbech, Maegen L. Rochner, Megan Gibson

Undergraduate Research Events

In Kentucky, historic and paleo-climate data are limited, and current understanding of long-term climate change in the state relies on instrumental data spanning only 1895-present. Proxy data are necessary to extend the temporal and spatial span of climate information. One potential proxy source for Kentucky is tree ring data, but currently, only four such datasets are publicly available on the International Tree Ring Data Bank (ITRDB). Archaeological and archival timber sources may help to fill in this gap. In the 1940s, Florence Hawley-Ellis, the first woman dendrochronologist, collected samples of white oak (Quercus alba L.) from four counties in western …

Development And Optimisation Of Convolutional Neural Networks (Cnns) To Predict The Nutrition And Sustainability Scores Of Foods From Crowd Sourced Images., Cormac Mcelhinney

ICT

This research explores the use of Convolutional Neural Networks (CNNs) for the automated classification and profiling of food products based on publicly sourced data. With the vast array of food products available worldwide and the complexity of labelling regulations, food business operators face challenges in ensuring compliance, while regulators struggle to verify adherence. This study addresses the need for efficient and accurate methods for food classification and eco/nutritional profiling. It begins with a comprehensive literature review on the application of CNNs in food product classification, followed by the collection of a large-scale dataset from Open Food Facts. A CNN architecture …

Supporting Dataset For The Influence Of Tile-Water On Groundwater Nitrate Concentrations Within A Saturated Riparian Buffer Zone, Aminat Tosin Abdulsalam, Eric Wade Peterson

Faculty Publications - Geography, Geology, and the Environment

In the U.S. Midwest, where fertile soils with high water retention are prevalent, the installation of tile drainage networks have become a common practice to drain excess soil water, which enhances plant growth and increases crop productivity. However, tile drainage networks coupled with the use of inorganic fertilizers have significant implications on water quality, contributing to eutrophication, leading to harmful algal blooms, and resulting in hypoxic conditions in surface water bodies. To mitigate excess nutrient exports to surface water bodies, edge-of-field practices have been introduced. One such practice is the saturated riparian buffer (SRB), which utilizes a diversion system to …

Transport And Fate Of Nitrate In A Saturated Buffer Zone As Assessed With A Chloride Tracer Test, Alhassan Sahad, Eric W. Peterson

Faculty Publications - Geography, Geology, and the Environment

The Upper Mississippi Basin, which includes Illinois, has highly fertile soils and experiences intensive agricultural practices. Although fertile, the soils do not drain well, resulting in the installation of tile-drainage systems. The practices of tile systems coupled with the application of nitrogen-rich fertilizers have led to the excessive export of nitrate from the agricultural fields into surface waters, contributing to eutrophication and the development of hypoxic zones in aquatic environments. Saturated riparian buffer zones (SRBs) have been proposed as a means to reduce the amount of nitrate discharged from tile-drained waters into streams. Previous works show a reduction in the …

Medium Range Prediction Of U.S. Severe Convective Storms, Robert Fritzen

Graduate Research Theses & Dissertations

Severe convective storms (SCSs) are responsible for billions of dollars of losses in the United States each year through hazards such as large hail, damaging convective wind gusts, and tornadoes. While techniques for forecasting these SCSs have improved over the years, a majority of these improvements focus on short term forecasting and nowcasting techniques. Little work has been done to analyze the recent advances in numerical weather prediction techniques, and to leverage these advances to the prediction of SCSs at the medium range (defined herein as lead-day 4--8). The primary objectives of this dissertation research are to: 1) explore the …

Optimizing Php Api Calls With Pagination And Caching, Parsharam Reddy Sudda

Dissertations, Master's Theses and Master's Reports

The Keweenaw Time Traveler (KeTT) project is devoted to mapping the historical and social landscapes of the Keweenaw Peninsula. During the project, it was discovered that the server-side performance needed improvement. To address this issue, the "Optimizing PHP API Calls with Pagination and Caching" initiative was launched. This initiative focused on refining API calls, implementing server caching and pagination, and fortifying security against common vulnerabilities. The project successfully mitigated risks associated with SQL Injection and XSS through meticulous code enhancements while improving error handling. Additionally, the introduction of Scroll-Induced Pagination optimized data delivery, significantly reducing response times, and elevating the …

Nutritional Quality Of Cultured Giant Freshwater Prawns (Macrobrachium Rosenbergii), Nurul F.M.S. Rizal, Najeebah A. Tashim, Zuhairi Azahari, Aida M. Basri, Tiong H. Lim, Aqilah Junaidi, Suriayati Chuprat, Seno A. Putra, Hanif Fakhrurroja

ASEAN Journal on Science and Technology for Development

Macrobrachium rosenbergii, or the giant freshwater prawn has high market demand due to its exceptional nutritional value for the human diet. Often, most nutritional studies focus on the edible prawn parts, rather than the prawn discarded components. The nutritional evaluation of different prawn parts can provide insights into the nutrient composition and guiding for the development of value-added products. Three groups of prawn samples were collected from 3 different ponds, representing different prawn sizes. The water quality analysis of each pond was also conducted to determine the extent to which it can affect the nutritional composition. The conventional and biochemical …

Innovative Approaches And Challenges In Brunei's Agricultural Management, Nuramalina Manshor, Ulaganathan Subramanian

ASEAN Journal on Science and Technology for Development

The management and development in agriculture attract agricultural economic science for the pricing, business, farm policy, and financial knowledge. It conjointly draws on plant and animal sciences for soil, seed and fertilizer information, weed control, insect management, and rationing and breeding; agricultural engineering knowledge for farmhouses, vehicles, irrigation, field drying, drainage, and management of erosions; and data on human behavior in Science and Social Science.

A Gis Tool For Optimal Forage Species Selection, David B. Hannaway, Christopher Daly, Michael D. Halbleib, Linda Brewer, Sophie Baur, Chelsea Clark, Emilie Krecklow, Scott Bassett

IGC Proceedings (1977-2023)

To determine appropriate forage species for US ecoregions, geographic information technologies (GIS) are being used to create climatic and soil factor maps. Excel spreadsheets and RStudio are used to create response functions of forage species to minimum and maximum temperature, annual precipitation, soil pH, soil salinity, and salinity. National forage data and expert opinion will evaluate quantitative tolerances, seasonal yield profiles, and pollinator suitability. These maps and agronomic and livestock use information will be shared with forage specialists and farmers to provide alternatives for improved perenniality, increased diversity, and system circularity. Future work will include development and evaluation of climate …

Locating And Assessing Oregon Trail Ruts With Aerial Stereophotographs, Satellite Imagery And Lidar, P.R. Hanson, Robert Matthew Joeckel, L. M. Howard

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Molecular Characterization Of Non-H5 And Non-H7 Avian Influenza Viruses From Non-Mallard Migratory Waterbirds Of The North American Flyways, 2006–2011, Shahan Azeem, John A. Baroch, Deepanker Tewari, Kristy L. Pabilonia, Mary L. Killian, Birgit Bradel-Tretheway, Dong Sun, Sara Ghorbani-Nezami, Kyoung-Jin Yoon

United States Department of Agriculture Wildlife Services: Staff Publications

The surveillance of migratory waterbirds (MWs) for avian influenza virus (AIV) is indispensable for the early detection of a potential AIV incursion into poultry. Surveying AIV infections and virus subtypes in understudied MW species could elucidate their role in AIV ecology. Oropharyngeal–cloacal (OPC) swabs were collected from non-mallard MWs between 2006 and 2011. OPC swabs (n = 1,158) that molecularly tested positive for AIV (Cts ≤ 32) but tested negative for H5 and H7 subtypes were selected for virus isolation (VI). The selected samples evenly represented birds from all four North American flyways (Pacific, Central, Mississippi, and Atlantic). Eighty-seven …

Wildlife Monitoring With Drones: A Survey Of End Users, Raymond B. Iglay, Landon R. Jones, Jared E. Elmore, Kristine O. Evans, Sathish Samiappan, Morgan B. Pfeiffer, Brad F. Blackwell

United States Department of Agriculture Wildlife Services: Staff Publications

Rapid advancements in technology often yield research inquiry into novel applications and drone (i.e., unoccupied aircraft systems or UAS) applications in wildlife management are no exception. We questioned the time lag between drone‐related research and end‐user assessments. We implemented an online, cross‐sectional survey of wildlife professionals to better understand current drone use and benefits or concerns, complemented by a review of contemporary peer‐reviewed and gray literature. We found little disparity between scientific inquiry and end‐user experiences (i.e., similar trends among concerns in published literature and survey results). Exploring new (i.e., advancements in computer vision) and refining original drone applications (i.e., …

Rates And Patterns Of Permafrost Thaw Induced Landcover Change At Scotty Creek, Canada, Mason Dominico

Theses and Dissertations (Comprehensive)

In the peatland-dominated regions of discontinuous permafrost in northwestern Canada, permafrost thaw is altering landscapes at rates without precedent in the historical record. The present study uses a combination of remote sensing and ground based methods to examine the rates and patterns of permafrost thaw and how such thaw is changing the form and function of the landscape. The area within a 4 km2 area of interest underlain by permafrost decreased from 51% in 1977 to 43% in 2010, and to 40% in 2018, indicating an increase in the permafrost thaw rate from 0.24% yr-1 between 1977 and 2010, and …

Abalones At Risk: A Global Red List Assessment Of Haliotis In A Changing Climate, Howard Peters, Gina M. Ralph, Laura Rogers-Bennett

Biological Sciences Faculty Publications

There is increasing awareness that marine invertebrates such as abalones are at risk from the combined stressors of fishing and climate change. Abalones are an important marine fishery resource and of cultural importance to Indigenous and non-Indigenous people. A highly priced marine delicacy, they are inherently vulnerable: individuals are slow-growing and long-lived and successful reproduction requires dense assemblages. However, their global conservation status is poorly understood. Using IUCN Red List methodology, we assessed the extinction risk to all 54 species of abalone (genus Haliotis). Of the 21 fished commercially for human consumption either now and/or in the past, 15 …

Growing Up Sustainable? Politics Of Race And Youth In Urbanplan, Copenhagen, Max Ritts, Rebecca Rutt

Geography

This paper considers how racialized youth in Denmark negotiate sustainability amid contexts marked by intersecting forms of economic restructuring, progressive neoliberalism, white ethno-nationalism, and green urban planning. Urbanplan is a low-income, notoriously “troubled” Copenhagen neighborhood where we conducted fieldwork for 7 months (2019-2020) with fifteen male youth, aged 17-21. Using ethnography, policy reviews, and interviews with city social workers, we explore how intimate experiences of nature, group-identity, and place attachment here relate to and depart from the structural forces actively reshaping the neighborhood. Our analysis combines Cindi Katz's intersectional political economy approach with recent work on green gentrification, Critical Utopian …

On The Understanding Of The Coastal-Urban Nexus Of Weather, Air Quality And Energy, Harold Gamarro

Dissertations and Theses

Urban environments exhibit complex interactions between atmospheric processes, building energy consumption, and air quality, particularly during periods of seasonal extremes such as summer ozone peaks and winter heating. Accurate representation of these interactions in urban modeling is crucial for understanding and addressing air pollution and energy management challenges in cities. This research presents a comprehensive study that advances urban atmosphere simulations by integrating building energy dynamics, air quality, and robust multi-source observational evaluation. Leveraging the Weather Research and Forecasting (WRF) model, coupled with a multilayer building environment parameterization (BEP) and a building energy model (BEM), with an improved boundary layer …

Keynote Address And Meeting Program, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

Molecular Understanding And Design Of Deep Eutectic Solvents And Proteins Using Computer Simulations And Machine Learning, Usman Lame Abbas

Theses and Dissertations--Chemical and Materials Engineering

Hydrophobic deep eutectic solvents (DESs) have emerged as excellent extractants. A major challenge is the lack of an efficient tool to discover DES candidates. Currently, the search relies heavily on the researchers’ intuition or a trial-and-error process, which leads to a low success rate or bypassing of promising candidates. DES performance depends on the heterogeneous hydrogen bond environment formed by multiple hydrogen bond donors and acceptors. Understanding this heterogeneous hydrogen bond environment can help develop principles for designing high performance DESs for extraction and other separation applications. This work investigates the structure and dynamics of hydrogen bonds in hydrophobic DESs …

On The Ground And From Above: A Multi-Factor Analysis Of The Direct And Indirect Drivers Of Tallgrass Prairie Small Mammal Communities, Erin Rowland-Schaefer

Graduate Research Theses & Dissertations

Tallgrass prairies are among the most globally threatened ecosystems, with only one percent of the historical extent remaining in Illinois. Prairie restoration is an essential strategy to preserve biodiversity and reestablish threatened species. Practitioners use management tools to shift the landscape context of prairie restoration sites, such as prescribed fire and land cover change. Managers can also impact the landscape connectivity and edge proximity of certain areas through the use of mowed driving lanes. The effects of these factors on small mammals, which are central in tallgrass prairie food webs and relevant to human health and restoration success, are not …

Developing A Snow Detection Algorithm Using Spatial Attention For Pedestrian Safety, Ricardo De Deijn

All Graduate Theses, Dissertations, and Other Capstone Projects

SNOW-COVERED SIDEWALKS POSE SIGNIFICANT SAFETY HAZARDS, ESPECIALLY FOR VULNERABLE POPULATIONS SUCH AS THE ELDERLY AND VISUALLY IMPAIRED. THE DEVELOPMENT OF EFFECTIVE SNOW DETECTION SYSTEMS IS CRUCIAL FOR ENHANCING PEDESTRIAN SAFETY. THIS RESEARCH AIMS TO ADDRESS THESE CHALLENGES BY DEVELOPING A SNOW DETECTION ALGORITHM SPECIFICALLY DESIGNED FOR SIDEWALKS. THE PROPOSED ALGORITHM USES A CONVOLUTIONAL NEURAL NETWORK (CNN) ARCHITECTURE INCORPORATING A 2-DIMENSIONAL SPATIAL ATTENTION MECHANISM TO FOCUS ON RELEVANT FEATURES IN IMAGES, IMPROVING SNOW DETECTION ACCURACY. DUE TO THE SEASONAL AND GEOGRAPHIC LIMITATIONS OF SNOW DATA COLLECTION, SYNTHETIC DATA GENERATION USING INVERSE DIFFUSION MODELS WAS EMPLOYED TO AUGMENT THE REAL-WORLD DATASET. ALTHOUGH …

Alfred Russel Wallace Notes 29. Extraterrestrial Entertainment: Are We Being Monitored By Alien Beings?, Charles H. Smith

Faculty/Staff Personal Papers

Alfred Russel Wallace (1823−1913) was an early advocate for the rational assessment of likelihood of extraterrestrial life. Current efforts to evaluate the situation have ranged from the heavily self-indulgent to the more objective, and it is still often difficult to decide just how much of the information we are receiving on the subject is dependable. An attempt is made here to cut through the haze and reduce the matter to elementals.

From Creek To Ditch And Back Again: The History And Future Of Pattee Creek, Missoula, Montana, Carver Edward Butterfield

Graduate Student Theses, Dissertations, & Professional Papers

Pattee Creek was once a free-flowing stream that meandered across the Missoula Valley, but has been channelized, piped, and degraded by logging, mining, agriculture, and urbanization. This thesis used a mixed-method approach to examine the impact of human activities on the Pattee Creek watershed. Beginning with a historical overview, the story of how the creek has been utilized and why it was buried was told. An analysis of historical photos from 1937 to 2019 revealed drastic changes in the land cover of the watershed and the channel of lower Pattee Creek. Developed land increased dramatically, while open land decreased and …

Reimagining Hunting Through Women's Decision Space, H. Nash Jackson

Electronic Theses and Dissertations

Approximately 14.4 million people hunt in the United States, yet only 3.1 million (22%) of these hunters are women. To enhance women’s participation, many state natural resource agencies aim to reduce barriers and create pathways for women to hunt. Previously, researchers surveyed women to understand and describe barriers to their full participation in hunting. However, this methodology often just quantifies the different barriers without describing the interconnectedness and how the complexity of barriers can impact women’s participation in hunting. This thesis instead took an inductive research approach with the goal of better understanding women’s perspectives when faced with complex barriers. …

A Tale Of Two Working Landscapes, Sage C. Sutcliffe

Graduate Student Theses, Dissertations, & Professional Papers

No abstract provided.

Paragenesis Of The Austin Chalk Formation In Southwest Texas, Mitchell C. Sherry

Graduate Student Theses, Dissertations, & Professional Papers

Presented in this study is a detailed investigation of the paragenesis and diagenetic processes of the Austin Chalk Formation in southwest Texas, utilizing a combination of core-based, petrographic, mineralogic, SEM, and geochemical based analyses. This study is conducted on a single whole rock core from an oil and gas producing well in Webb County, Texas. At this distal shelf location within the Maverick Basin, the Austin Chalk Formation consists of foraminiferal wackestones, siliceous wackestones, foraminiferal mudstones, bentonites, and foraminiferal packstone facies. These facies were deposited below wave base through pelagic, hemipelagic, and gravity driven processes. Petrographic and SEM analyses reveal …