Digital Commons Network^™

Atrazine And Nitrate In Public Drinking Water Supplies And Non-Hodgkin Lymphoma In Nebraska, Usa, Martha G. Rhoades, Jane L. Meza, Cheryl L. Beseler, Patrick J. Shea, Andy Kahle, Julie M. Vose, Kent M. Eskridge, Roy F. Spalding

School of Natural Resources: Faculty Publications

A secondary analysis of 1999–2002 Nebraska case-control data was conducted to assess the risk of non-Hodgkin lymphoma (NHL) associated with exposure to nitrate- and atrazine-contaminated drinking water. Water chemistry data were collected and weighted by well contribution and proximity of residence to water supply, followed by logistic regression to determine odds ratios (OR) and 95% confidence intervals (CI). We found no association between NHL risk and exposure to drinking water containing atrazine or nitrate alone. Risk associated with the interaction of nitrate and atrazine in drinking water was elevated (OR, 2.5; CI, 1.0–6.2). Risk of indolent B-cell lymphoma was higher …

Nondetection Sampling Bias In Marked Presence-Only Data, Trevor Hefley, Andrew J. Tyre, David M. Baasch, Erin E. Blankenship

School of Natural Resources: Faculty Publications

1 Species distribution models (SDM) are tools used to determine environmental features that influence the geographic distribution of species’ abundance and have been used to analyze presence-only records. Analysis of presenceonly records may require correction for nondetection sampling bias to yield reliable conclusions. In addition, individuals of some species of animals may be highly aggregated and standard SDMs ignore environmental features that may influence aggregation behavior.

2 We contend that nondetection sampling bias can be treated as missing data. Statistical theory and corrective methods are well developed for missing data, but have been ignored in the literature on SDMs. We …

Phytoplankton In Virginia Lakes And Reservoirs, Harold G. Marshall

Virginia Journal of Science

This study involves a phytoplankton summer/autumn survey in 46 Virginia lakes and reservoirs during 2010-2012. A total of 307 taxa were identified which included several filamentous and colonial cyanabacteria in bloom concentrations. With the exception of one natural lake, the other sites sampled represent impoundments created decades ago, with the majority presently classified as meso- or eutrophic. Among the cyanobacteria were 6 known toxin producers (Anabaena circinalis, Anabaena spiroides, Aphanizomenon flos-aquae, Cylindrospermopsis raciborskii, Limnothrix redekei, and Microcystis aeruginosa). The study characterizes phytoplankton populations in these aging freshwater habitats taken from a large number …

Insights Into Forest Soil Carbon Dynamics From Nuclear Magnetic Resonance Spectroscopy, Chris E. Johnson

Civil and Environmental Engineering - All Scholarship

No abstract provided.

Fire And Fish Dynamics In A Changing Climate: Broad- And Local-Scale Effects Of Fire-Induced Water Temperature Changes On Native And Nonnative Fish Communities, Michael K. Young, Lisa Eby, Lisa Holsinger, Daniel J. Isaak, Robert E. Keane

Joint Fire Science Program Research Project Reports

Fire is a key natural disturbance that affects the distribution and abundance of native fishes in the Rocky Mountain West. In the absence of migratory individuals from undisturbed portions of a watershed, persistence of native fish populations depends on the conditions of the post-fire stream environment. Stream temperatures typically warm after fire, and remain elevated until riparian vegetation recovers. An additional threat to native species is that nonnative fishes have invaded many waters, and these species tolerate or prefer warmer water temperatures. Thus, forecasting the long-term effects of fire on native fish populations requires an understanding of fire dynamics (size, …

The Vascular Flora Of Clay Prairie State Preserve (Butler County, Iowa): Recommendations To The Iowa State Preserve System, Edwin L. Freese, William R. Norris

Journal of the Iowa Academy of Science: JIAS

Clay Prairie State Preserve (1.2 ha) is an upland prairie located in Butler County, IA, and represents one of the last remnants of black-soil tallgrass prairie in northeast Iowa. An annotated checklist of the vascular flora of Clay Prairie is presented here, based on a previously published flora of the preserve and recent field work conducted by the authors between 1997 to 2001, and 2008 to 2011. The preserve contains a diverse vascular flora representing 50 families, 145 genera and 214 taxa (174 native to Iowa). In comparison with 26 larger prairies (4 to 121 ha) protected in the Iowa …

Ecology Of Glacial Relict Fishes In South Dakota's Sandhills Region, Eli Felts

Electronic Theses and Dissertations

Native stream fish zoogeography has changed substantially across North America during the last century as habitat degradation, stream fragmentation and introductions of nonnative species have led to numerous extinctions, extirpations and altered distributions. Insufficient information regarding imperiled species often results in reactive, rather than proactive, management, and knowledge of species status and ecology is critical in identifying conservation priorities. South Dakota populations of three dace species (northern redbelly dace Chrosomus eos, finescale dace Chrosomus neogaeus, and pearl dace Margariscus margarita) are relict of Pleistocene Glaciation and are isolated from the northern core of their distribution, but little information exists regarding …

Climate Change Effects On Vibrio Bacteria In The Winyah Bay Estuary And The Projected Spread Of Vibrio Under Future Climatic Scenarios., Reem Deeb

Theses and Dissertations

While there are several studies on the distribution ofVibrio vulnificusandVibrio parahaemolyticusin estuarine waters around the world, there is little information on the distribution of both organisms in South Carolina waters. Monthly sampling of surface and bottom water from 9 sites in Winyah Bay was conducted over the period April-October 2012. Both organisms were enumerated on CHROMagarVibriomedia. TheVibriocounts obtained were mainly less than 20 Colony Forming Units (CFU)/ml which is typical for what was found elsewhere along the coast of the Carolinas. TheVibrio vulnificuscounts were the highest when salinity ranged between 5 ppt and 20 ppt.Vibrio parahaemolyticusdid not show a clear …

Does Pitcher Plant Morphology Affect Spider Residency?, Marc A. Milne, Deborah A. Waller

Biological Sciences Faculty Publications

Spiders are often found as residents in association with Sarracenia purpurea ( Purple Pitcher Plant). Many spiders choose web locations based on environmental cues such as vegetation structure and composition, prey density, temperature, and humidity. To determine if spiders use cues from the Purple Pitcher Plant to build their webs, we conducted a field study using variants of the plant that separated various morphological features: nectar, pigment, and the presence of prey. There was no difference in spider residency across all treatments and no difference in male/female or mature/immature residency. Linyphiids were the most common residents, possibly due to pitcher …

Phytoplankton In Virginia Lakes And Reservoirs, Harold G. Marshall

Biological Sciences Faculty Publications

This study involves a phytoplankton summer/autumn survey in 46 Virginia lakes and reservoirs during 2010-2012. A total of 307 taxa were identified which included several filamentous and colonial cyanabacteria in bloom concentrations. With the exception of one natural lake, the other sites sampled represent impoundments created decades ago, with the majority presently classified as meso- or eutrophic. Among the cyanobacteria were 6 known toxin producers (Anabaena circinalis, Anabaena spiroides, Aphanizomenon flos-aquae, Cylindrospermopsis raciborskii, Limnothrix redekei, and Microcystis aeruginosa). The study characterizes phytoplankton populations in these aging freshwater habitats taken from a large number …

Inter- And Intra-Annual Variability Of Vegetation In The Northern Hemisphere And Its Association With Precursory Meteorological Factors, Boksoon Myoung, Yong-Sang Choi, Seungbum Hong, Seon Ki Park

Mathematics, Physics, and Computer Science Faculty Articles and Research

Determination of phenological variation is one of the most critical challenges in dynamic vegetation modeling, given the lack of a strong theoretical framework. Previous studies generally focused on the timing of a phenological event (e.g., bud-burst or onset of growing season) and its atmospheric prompts, but not on the interactive variations across phenological stages. This study, therefore, investigated the inter- and intra-annual variability existing in all the phenological stages and the relations of the variability with four meteorological variables (surface temperature (Ts), shortwave radiation (SW ), vapor pressure deficit (VPD), and precipitation (PRCP)) using a 25-year (1982-2006) dataset of leaf …

The Feasibility Of Using Vanadium And Nickel To Track Oil Spills In Coastal Environments, Sean Patrick Kenny

LSU Master's Theses

Crude oil has been increasing in world demand over the past century. It is known that oil is resistant to weathering processes and if spilled, can cause serious environmental damage to an area, on land or sea. A complementary approach to current methods of tracking oil and identifying spill-impacted sediments may be to measure trace metals associated with crude oil. Trace metals, such a vanadium (V) and nickel (Ni) are known to be elevated in concentration in some oil sources, but little work has been done on this topic. This research explored less expensive and time-consuming methods to track or …

Impacts Of Artificial Reef Addition On The Nekton Community Of Louisiana Marsh Ponds: A Before-After-Control-Impact Analysis, Kari Elizabeth Klotzbach

LSU Master's Theses

Louisiana’s coastal estuaries are dynamic, highly variable environments that provide nursery areas for numerous recreationally and commercially important species. Louisiana’s coastline is constantly changing due to natural and anthropogenic processes, and it is important to know how nektonic species are impacted by such changes. This study sought to assess the effects of introducing a hard substrate artificial reef on the nekton community of a Louisiana estuary. A before-after-control-impact (BACI) design was used to assess the impacts of artificial reef addition on nektonic fishes and crustaceans in four shallow marsh ponds near Empire, Louisiana. Marsh ponds were sampled by purse seine …

Polytopes Arising From Binary Multi-Way Contingency Tables And Characteristic Imsets For Bayesian Networks, Jing Xi

Theses and Dissertations--Statistics

The main theme of this dissertation is the study of polytopes arising from binary multi-way contingency tables and characteristic imsets for Bayesian networks.

Firstly, we study on three-way tables whose entries are independent Bernoulli ran- dom variables with canonical parameters under no three-way interaction generalized linear models. Here, we use the sequential importance sampling (SIS) method with the conditional Poisson (CP) distribution to sample binary three-way tables with the sufficient statistics, i.e., all two-way marginal sums, fixed. Compared with Monte Carlo Markov Chain (MCMC) approach with a Markov basis (MB), SIS procedure has the advantage that it does not require …

A Global Standard For Monitoring Coastal Wetland Vulnerability To Accelerated Sea-Level Rise, Edward L. Webb, Daniel A. Friess, Ken W. Krauss, Donald R. Cahoon, Glenn R. Guntenspergen, Jacob Phelps

United States Geological Survey: Staff Publications

Sea-level rise threatens coastal salt-marshes and mangrove forests around the world, and a key determinant of coastal wetland vulnerability is whether its surface elevation can keep pace with rising sea level. Globally, a large data gap exists because wetland surface and shallow subsurface processes remain unaccounted for by traditional vulnerability assessments using tide gauges. Moreover, those processes vary substantially across wetlands, so modelling platforms require relevant local data. The low-cost, simple, high-precision rod surface-elevation table–marker horizon (RSET-MH) method fills this critical data gap, can be paired with spatial data sets and modelling and is financially and technically accessible to every …

Trophic Ecology Of Oxygen Minimum Zone Zooplankton Revealed By Carbon And Nitrogen Stable Isotopes, Rebecca Williams

Open Access Dissertations

Oxygen minimum zones (OMZs) are areas in which midwater oxygen concentration can be significantly lower than in non OMZ areas at comparable depths. OMZs are of great interest because of the limits oxygen availability places on life. The potential for OMZ expansion with warming of the oceans has refocused attention on the importance of these areas and their potential impacts on the global carbon cycle. The large open ocean OMZs of the Eastern Tropical Pacific and Arabian Sea are notable for their size, thickness, and the intensity of oxygen depletion (

Here, I use measurements of natural abundance carbon and …

Assessing The Equity Implications Of Greenspace Distribution In An Arid Region, Abdelatif Eldeb

Open Access Theses & Dissertations

In the last few decades, vegetation deterioration is receiving increased attention because of its adverse impacts on societal and human health, environmental sustainability, and quality of life. I have selected two cities in Chihuahua Desert region (El Paso and Juarez) as case study sites to develop a novel and applicable methodology for integrating remotely sensed data of different spectral and spatial resolutions into an analysis of the spatial distribution of an urban amenity. The primary objective of this research is to determine if the spatial distribution of greenspace in 2010 is equitable with respect to socio-demographics in El Paso and …

Insects As Indicators Of Environmental Stress, De Anna Estella Beasley

Theses and Dissertations

In the face of climate change-related events and anthropogenic disturbances, understanding the impacts of these events on species richness, abundance and distribution is important for us to mitigate biodiversity loss and better predict consequences for the environment and for human life. Insects are excellent models for understanding the consequences of environmental stress due to the sensitivity of their development and behavior. The overall focus of my dissertation research is the investigation of fluctuating asymmetry and oviposition behavior as indicators of environmental stress. My research includes a meta-analysis of published literature, and empirical research that was part of a collaborative initiative …

Gradients In Season, Latitude, And Sea Ice: Their Effect On Metabolism And Stable Isotopic Composition Of Antarctic Micronekton, Erica H. Ombres

USF Tampa Graduate Theses and Dissertations

Respiration, metabolic enzyme assays, and body composition parameters were measured in the Antarctic krill Euphausia superba during the summer, fall and winter on the Western Antarctic Peninsula (WAP). E. superba of all sizes decrease their metabolism from the summer to the winter. These same parameters were also measured along the WAP during the austral fall 2010. E. superba's enzyme activity indicated that there was a latitudinal gradient to the decline in metabolism along the WAP with the more northerly sites having significantly higher metabolic enzyme activities than the sites to the south.

Carbon (δ¹³C) and nitrogen (δ^{15 …}

Ecology Of The Late Neogene Extinctions: Perspectives From The Plio-Pleistocene Of Florida, Shubhabrata Paul

USF Tampa Graduate Theses and Dissertations

The ecological impact of past extinction events is one of the central issues in paleobiology. In face of present environmental changes, a better understanding of past extinctions will enable us to identify the magnitude of biodiversity crises and their underlying processes. The Late Neogene was a time of extraordinary climatic reorganization, including Northern Hemisphere glaciation, the rise of the Central American Isthmus, and associated changes in environmental conditions. Therefore, the Late Neogene extinctions of marine molluscs of South Florida present an ideal platform to examine the interaction between environmental changes and biotic response. In the present study, three different aspects …

Effect Of Laser Ablation Depth In Otolith Life History Scans, Renée R. Hoover, Cynthia M. Jones

OES Faculty Publications

Life history scans of fish otoliths are bringing new insight into the structure, connectivity, and movement of fish populations. Data obtained from such scans, however, possess in-herent limitations that have not yet been fully addressed or understood. For example, several investigators have noted delays in otolith elemental uptake that do not appear to reflect habitat exposure. We hypothesized that the 3-dimensional structure of otoliths may produce sampling artifacts in the results obtained from laser ablation scans. To test this hypothesis, we sampled sagittal otoliths from juvenile Atlantic croaker Micropogonias undulatus with laser ablation inductively coupled plasma mass spectrometry to obtain …

Characterization Of Epibenthic And Demersal Megafauan At Mississippi Canyon 252 Following The Deepwater Horizon Oil Spill, Marla Maxine Valentine

LSU Master's Theses

Increased demand for new sources of oil and gas has resulted in an expansion of drilling into deeper waters. With this exploratory drilling come increased risks, which were realized on April 20, 2010 when the blow out preventer on the Macondo Well failed, resulting in the release of a large quantity of oil and gas into the Northern Gulf of Mexico from a bathypelagic source. This unprecedented environmental disaster was coined the Deepwater Horizon Oil Spill by the popular news media. In the months that followed the spill, the lack of knowledge about the pre-spill condition of deep-sea communities in …

Some Effects Of Nutrient And Flooding Stress Manipulation On Coastal Louisiana Wetland Vegetation, James Stephen Ialeggio

LSU Master's Theses

Freshwater diversions are a relatively recently utilized tool in wetland loss mitigation that stimulate an organic accretion response in marsh vegetation, which is based in root production and thus belowground biomass. The effectiveness of freshwater diversions in slowing marsh loss probably varies across a gradient of the factors they supply: decreased salinity, increased nutrient concentrations, and increased inundation. Flooding stress is commonly thought to be the overriding factor limiting wetland vegetation growth, however its influence may vary across salinity and nutrients. Therefore, plugs of Spartina patens were planted in four “marsh organs” consisting each of 36 sediment-filled PVC pipes of …

Community Resilience To Coastal Hazards : An Analysis Of Two Geographical Scales In Louisiana, Chi Li

LSU Master's Theses

Quantifying resilience is difficulties due to the different definitions of resilience, the interchangeable uses with two other terms “vulnerability” and “adaptability”, as well as the lack of consensus on what indicators should be selected to quantifying resilience. This thesis research studied the community resilience in Louisiana by applying the Resilience Inference Measurement (RIM) model at two geographic levels: county level and zip code level. The RIM model accesses resilience by using three dimensions (exposure, damage, and recovery) and two abilities (vulnerability and adaptability). The types of coastal hazards included in this study were: coastal, flooding, hurricane/tropical storm, tornado, and severe …

Effects Of Physicochemical Properties And Macrohabitat On The Foraging Ecology And Condition Of The Centrarchid Assemblage Of The Atchafalaya River Basin, Louisiana, Brett A. Miller

LSU Master's Theses

The Atchafalaya River Basin (ARB), Louisiana supports a diverse centrarchid assemblage, characterized by abundant populations of largemouth bass Micropterus salmoides, black crappie Pomoxis nigromaculatus, warmouth Lepomis gulosus, bluegill Lepomis macrochirus, redspotted sunfish Lepomis miniatus, longear sunfish Lepomis megalotis and redear sunfish Lepomis microlophus. This dynamic floodplain ecosystem is comprised of a mosaic of macrohabitats, including natural bayous, shallow lakes, dead-end and open pipeline canals. I conducted an extensive feeding ecology study to determine the influence of these macrohabitats on foraging activity through stomach content and stable isotope analyses. I collected 2,036 centrarchids with electrofishing efforts in the summers of 2011 …

Investigations For Utilizing Pteropods As Bioindicators Of Environmental Change Along The Western Antarctic Peninsula, Paul Mark Suprenand

USF Tampa Graduate Theses and Dissertations

Pteropods are holoplanktonic gastropod molluscs found globally. Although species diversity is greater at lower latitudes, species abundance is greater at temperate and polar latitudes. Declines in pteropod populations have not only been correlated to declines of their major predators, but pteropods have also been used as bioindicators of global environmental changes such as ocean acidification. With high latitude abundances, pteropods provide significant sustenance for species such as the Atlantic salmon in the Atlantic Ocean and Pleuragramma antarcticum in the Southern Ocean. Because pteropods eat phytoplankton and other pteropods, factors that affect pteropod abundance influence many trophic levels. This dissertation explores …

The Water Culture Beliefs Of Embera Communities And Maternal And Child Health In The Republic Of Panama, Ilenia Anneth Forero

USF Tampa Graduate Theses and Dissertations

Water has cultural and spiritual values to indigenous people. These beliefs expose them to unsafe water sources and make them vulnerable to waterborne diseases. This background is not taken into account when countries write their water legislations, therefor imposing a management of water not readily accepted by them. The Embera group is one of the indigenous groups from the Republic of Panama, who have strong water beliefs. They live along the shore of rivers in houses built on high stilts away from urban areas. The purpose of this cross-sectional community based study is to describe through a survey the relation …

Time Scale Of Groundwater Recharge: A Generalized Modeling Technique, Makhan Virdi

USF Tampa Graduate Theses and Dissertations

Estimating the quantity of water that reaches the water table following an infiltration event is vital for modeling and management of water resources. Estimating the time scale of groundwater recharge after a rainfall event is difficult because of the dependence on nonlinear soil characteristics and variability in antecedent conditions. Modeling the flow of water through the variably saturated zone is computationally intensive since it requires simulation of Richards' equation, a nonlinear partial differential equation without a closed-form analytical solution, with parametric relationships that are difficult to approximate. Hence, regional scale coupled (surface water - groundwater) hydrological models make simplistic assumptions …

Using Marine Snails To Teach Biogeography And Macroevolution: The Role Of Larvae And Dispersal Ability In The Evolution And Persistence Of Species, Jonathan R. Hendricks

Faculty Publications

While some marine animals are capable of traveling great distances, many have limited mobility as adults and spend the majority of their lifetimes in a small geographical area or may even be cemented to a single place. While it might be expected that species with limited mobility would have small geographic distributions, some nevertheless occur over very large areas. This is the case for some marine snails (gastropods). A key factor that impacts the geographic distribution of marine snails is the type of larvae they have during the phase of their life history that follows hatching from an egg. Because …

Habitat Modeling Of Three Endemic Crayfish Species In The Black River Drainage Of Missouri And Arkansas: Factors Affecting Distribution And Abundance, Matthew Stephen Nolen

Graduate Theses and Dissertations

The Ozark faunal region of Missouri and Arkansas harbors a high level of aquatic biological diversity, especially in regards to endemic crayfish. Orconectes eupunctus, Orconectes marchandi, and Cambarus hubbsi are three such endemics that are threatened by a limited natural distribution and the invasions of Orconectes neglectus. I sought to determine how natural and anthropogenic factors influence these three species across multiple spatial scales. Local and landscape data were used in decision tree analyses (CART) to determine their influence effect on presence/absence and density of the three species. Predictive models were validated using k-fold cross validation. O. eupunctus presence was …