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Improving Cancer Diagnosis And Patient Outcomes With Deep Learning Models, Mariana Arriz-Jorquiera Jul 2026

Improving Cancer Diagnosis And Patient Outcomes With Deep Learning Models, Mariana Arriz-Jorquiera

USF Tampa Graduate Theses and Dissertations

Cancer care depends on timely and reliable decisions, from detection and diagnosis to treatment planning and patient monitoring. These decisions are often made under uncertainty because medical images and healthcare data may be noisy, incomplete, or difficult to interpret. In breast cancer imaging, ultrasound is widely used because it is safe, accessible, and complementary to other imaging modalities. However, variations in image quality, acquisition conditions, and noise can obscure lesion boundaries and texture, affecting human interpretation and artificial intelligence reliability. This dissertation develops deep learning, image-analysis, and optimization methods to improve healthcare decisions under imperfect information. Its primary focus is …


A Late Holocene (Late Bronze Age) Record Of The Syrian Elephant (Elephas Maximus Asurus) From Gavur Lake Swamp (Kahramanmaraş, Türkiye), Serdar Mayda, Yarenkür Alkan Jul 2026

A Late Holocene (Late Bronze Age) Record Of The Syrian Elephant (Elephas Maximus Asurus) From Gavur Lake Swamp (Kahramanmaraş, Türkiye), Serdar Mayda, Yarenkür Alkan

Turkish Journal of Earth Sciences

The Syrian elephant (Elephas maximus asurus Deraniyagala, 1951) constitutes the extinct westernmost population of the Asian elephant and occupied parts of the Near East until the early first millennium BCE. Although historical, iconographic, and dental evidence for this population has been discussed extensively, its postcranial anatomy remains poorly documented. We present a revised osteological and morphometric study of cranial and postcranial remains recovered from the Late Bronze Age Gavur Lake Swamp assemblage (ca. 1650–1400 cal BCE) in Kahramanmaraş, southeastern Türkiye, during rescue excavations conducted in 2021 and 2022. The material derives from a natural swamp deposit rather than from an …


Resource Assessment Report 9: South Coast Crustacean Resource 2045-25 Assessment, Emma-Jade Tuffley, Simon De Lestang Jul 2026

Resource Assessment Report 9: South Coast Crustacean Resource 2045-25 Assessment, Emma-Jade Tuffley, Simon De Lestang

Resource Assessment Reports

The South Coast Crustacean Resource (SCCR) comprises southern rock lobster (Jasus edwardsii), western rock lobster (Panulirus cygnus), crystal crab (Chaceon albus), giant crab (Pseudocarcinus gigas), and champagne crab (Hypothalassia acerba). The resource is accessed primarily by the South Coast Crustacean Managed Fishery (SCCMF), which operates between Augusta in the west and the South Australian border in the east. Since the 2022–23 season, the SCCMF has been managed under an Individual Transferable Quota (ITQ) system with Total Allowable Commercial Catches (TACs) set for four quota zones. Recreational fishing retains a small quantity of rock lobster only.

During the 2024–25 fishing season, …


Integrated Edge Detection Of Gravity Data And Seismicity Approach For Mapping Potential Faults In The Bolu Region, Hazel Deni̇z Toktay, Burçi̇n Di̇dem Tamtaş Jul 2026

Integrated Edge Detection Of Gravity Data And Seismicity Approach For Mapping Potential Faults In The Bolu Region, Hazel Deni̇z Toktay, Burçi̇n Di̇dem Tamtaş

Turkish Journal of Earth Sciences

The Bolu region, situated along the western–central segment of the North Anatolian Fault Zone (NAFZ), is characterized by a complex fault architecture in which multiple overlapping strike-slip segments and associated subsurface structures accommodate active crustal deformation. Although the principal fault strands of the NAFZ have been well mapped, several clusters of seismicity are observed in areas without clear surface fault expression, indicating the presence of subsurface or poorly expressed fault zones. In this study, we integrated edge detection methods with a seismicity approach to delineate active and buried structural features across the Bolu region. Bouguer gravity anomalies derived from the …


From Automation To Adjudication: Evaluating The Role Of Artificial Intelligence In Dispute Settlement, Karem Sayed Aboelazm, Muayad Ahmad Obeidat, Raghda Raafat, Nada Zuhair Alfil, Fady Tawakol Jul 2026

From Automation To Adjudication: Evaluating The Role Of Artificial Intelligence In Dispute Settlement, Karem Sayed Aboelazm, Muayad Ahmad Obeidat, Raghda Raafat, Nada Zuhair Alfil, Fady Tawakol

All Works

This paper explores the evolving transition from automation to adjudication by examining the role of artificial intelligence (AI) in dispute settlement processes. It assesses how AI can enhance procedural efficiency, support judicial reasoning, and improve access to justice. Adopting a qualitative and interpretive approach, the study analyzes academic scholarship, policy frameworks, and comparative international practices to understand the integration of AI within judicial and quasi-judicial settings (Abedi et al., 2025). The findings suggest that while AI significantly improves administrative processes and provides valuable decision-support tools, it also raises critical concerns regarding algorithmic bias, lack of transparency, and the risk of …


"Todo: Fix The Mess Gemini Created": Towards Understanding Genai-Induced Self-Admitted Technical Debt, Abdullah Al Mujahid, Mia Mohammad Imran Jul 2026

"Todo: Fix The Mess Gemini Created": Towards Understanding Genai-Induced Self-Admitted Technical Debt, Abdullah Al Mujahid, Mia Mohammad Imran

Computer Science Faculty Research & Creative Works

As large language models (LLMs) such as ChatGPT, Copilot, Claude, and Gemini become integrated into software development workflows, developers increasingly leave traces of AI involvement in their code comments. Among these, some comments explicitly acknowledge both the use of generative AI and the presence of technical shortcomings. Analyzing 6,540 LLM-referencing code comments from public Python and JavaScript-based GitHub repositories (November 2022-July 2025), we identified 81 that also self-admit technical debt (SATD). Developers most often describe postponed testing, incomplete adaptation, and limited understanding of AI-generated code, suggesting that AI assistance affects both when and why technical debt emerges. We term GenAI-Induced …


Assessing Flaws In Captcha Security Through Progress In Ai, Jaydon Stanislowski Jul 2026

Assessing Flaws In Captcha Security Through Progress In Ai, Jaydon Stanislowski

Scholarly Horizons: University of Minnesota, Morris Undergraduate Journal

Protecting the internet from the threat of malicious bot activity is an important problem as AI tools become more powerful and commonplace over time. To that end, security measures are employed across websites in the form of CAPTCHAs, short challenges designed to identify and block fake web traffic. Yet, they become less effective over time as AI becomes more powerful, and thus more capable of solving them. This paper examines recent research on the threat to CAPTCHA security posed by current AI models and how this security can be reinforced over time, focusing primarily on Google’s reCAPTCHA v3.


Zero Trust Architecture And Ransomware Mitigation, Ely Johnson Jul 2026

Zero Trust Architecture And Ransomware Mitigation, Ely Johnson

Scholarly Horizons: University of Minnesota, Morris Undergraduate Journal

Ransomware has become a critical threat to modern enterprises, exploiting excessive privileges and flat network architectures to spread rapidly. Traditional perimeter-based security models are insufficient, as they rely on implicit trust within internal networks. This paper examines how Zero Trust Architecture (ZTA) mitigates ransomware through least privilege access, continuous monitoring, and micro- segmentation. Experimental results show that ZTA can significantly reduce impact, limiting encryption to about 20% of targeted files while preserving most data. Continuous monitoring enables rapid detection (5.3 seconds) with high accuracy (up to 97.2%) and a 78% reduction in false positives. Micro-segmentation further restricts lateral movement, reducing …


Security Limitations Of The Can Bus And Detection Through Power Fingerprinting, Ken Broden Jul 2026

Security Limitations Of The Can Bus And Detection Through Power Fingerprinting, Ken Broden

Scholarly Horizons: University of Minnesota, Morris Undergraduate Journal

This paper examines the vulnerabilities of the Controller Area Network (CAN), the standard communication protocol used in most modern vehicles. It explains why CAN is widely adopted and outlines key security weaknesses in its design. The paper then reviews recent research efforts to detect and mitigate these vulnerabilities, with particular focus on an approach to origin authentication that relies on the unique power consumption patterns of each individual electronic control unit on a CAN bus.


Quantitative Methods In Education: A Practical Introduction To Statistics, Yukiko Maeda, John Gipson, Sheila Hurt, Katie H. Dufault Jul 2026

Quantitative Methods In Education: A Practical Introduction To Statistics, Yukiko Maeda, John Gipson, Sheila Hurt, Katie H. Dufault

Purdue University Press Books

Educational research often involves understanding complex patterns in student achievement, teacher effectiveness, and institutional performance. Quantitative Methods in Education: A Practical Introduction to Statistics is designed to equip current and future educators and researchers with a basic comprehension of the statistical tools necessary to effectively analyze and interpret educational data. In today’s data-driven world, the ability to leverage statistical techniques is essential for making informed decisions that can enhance learning outcomes and maximize learner potential. This book provides a systematic approach to exploring these trends using both descriptive and inferential statistics, providing readers with the knowledge to conduct rigorous analyses …


Distributed Computation Of Graph Structures By Mobile Agents, Prabhat Kumar Chand Jul 2026

Distributed Computation Of Graph Structures By Mobile Agents, Prabhat Kumar Chand

Doctoral Theses

This thesis investigates how mobile agents with no centralised control can be employed in anonymous networks to perform efficient distributed graph computations. The network is modelled as a simple, undirected, anonymous graph with n nodes and m edges, where nodes are memoryless and indistinguishable, and edges represent bidirectional communication links or traversal paths for the agents. The mobile agents are uniquely identifiable, possess limited local memory, and operate under a local communication model, in which communication is restricted to agents colocated at the same node. Under this computational model, we explore how mobile agents can collaborate effectively to solve global …


Critical Assessment On Challenges And Advances In Coal Pillar Strength Estimation Techniques: A Focus On Geological Discontinuities, Abhishek Kumar Singh, Sahendra Ram Jul 2026

Critical Assessment On Challenges And Advances In Coal Pillar Strength Estimation Techniques: A Focus On Geological Discontinuities, Abhishek Kumar Singh, Sahendra Ram

Journal of Sustainable Mining

Accurate estimation of coal pillar strength is essential for ensuring safety and operational efficiency in underground mining. Current assessment methods often face limitations in addressing time-dependent failure mechanisms, geological discontinuities, and dynamic loading conditions. This paper identifies future research directions aimed at enhancing the reliability of pillar strength evaluations. One important focus is the development of advanced numerical models that account for time-dependent behaviours such as creep and fatigue. Incorporating multi-scale modelling techniques, which connect micro-scale material responses to macro-scale structural performance, may lead to more precise predictions. The integration of real-time monitoring systems measuring stress, deformation, and environmental factors …


Fish Tissue Digestion And Microplastic Polymer Identification Protocol Using Open-Source Ftir Database, Shawn L. Kissinger, Vick-Ariel Privert, Jason Bystriansky, Kyle A. Grice Jul 2026

Fish Tissue Digestion And Microplastic Polymer Identification Protocol Using Open-Source Ftir Database, Shawn L. Kissinger, Vick-Ariel Privert, Jason Bystriansky, Kyle A. Grice

DePaul Discoveries

Microplastic (MP) contamination in aquatic ecosystems poses significant concerns for environmental and public health, as seafood represents a critical food source worldwide. Despite increasing evidence of MP presence in marine organisms, efficient and accessible detection methods remain essential for characterizing contamination patterns and informing regulatory frameworks. This study extracted MPs from brain, gill, intestine, liver, and muscle tissues of gilt-head bream (Sparus aurata) and European sea bass (Dicentrarchus labrax), two commercially important species from the Gulf of Cádiz, Spain, using a NaOH–HNO₃ chemical digestion protocol. Isolated particles were characterized by Fourier Transform Infrared (FTIR) spectroscopy, with …


Crystal Structural Analysis Of Medieval Human Bones Using Wide-Angle X-Ray Scattering, Selly Altangerel, Leslie Gracia Jul 2026

Crystal Structural Analysis Of Medieval Human Bones Using Wide-Angle X-Ray Scattering, Selly Altangerel, Leslie Gracia

DePaul Discoveries

Female human second metacarpal (mc2) bones from a medieval cemetery at Wharram Percy, England, were studied using high-energy Wide-Angle X-ray Scattering (WAXS) at beamline 1-ID of the Advanced Photon Source at Argonne National Laboratory. The age-at-death of 33 samples was determined from molar wear and classified into 3 groups:  18-30, 30-50, and 50+ years old.  Rietveld refinements of the WAXS data were performed to obtain lattice parameters of the hexagonal carbonated apatite phase (cAp). Individual fittings for cAp peaks 00.2, 00.4, and 31.0 were performed to obtain their widths and correlate them to collagen retention. For the three samples described …


Efficient Edge Implementation Of Midasnet For Real-Time Depth Estimation In Indoor Robotics, Muhammed Yasi̇n Adiyaman, İsmai̇l Fai̇k Başkaya Jul 2026

Efficient Edge Implementation Of Midasnet For Real-Time Depth Estimation In Indoor Robotics, Muhammed Yasi̇n Adiyaman, İsmai̇l Fai̇k Başkaya

Turkish Journal of Electrical Engineering and Computer Sciences

Real-time depth estimation is crucial in many vision-related tasks, including autonomous driving, 3D reconstruction, robotics, and simultaneous localization and mapping. In recent years, many methods have been proposed to solve depth maps from images by utilizing different modality setups like monocular vision, binocular vision, or sensor fusion. However, for real-time deployment on edge devices, complex methods are not suitable due to latency constraints and limited computation capacity. For edge implementation, models should be simple, minimal in size, and hardware-friendly. Considering these factors, we implemented MiDaSNet, which works on the simplest setup of monocular vision and utilizes hardware-friendly convolutional neural network-based …


A Holistic Approach For Workforce Scheduling And Routing, Kerem Can Manalp, Ansel Kaplan Erol, Kutluhan Erol, Cem Evrendi̇lek Jul 2026

A Holistic Approach For Workforce Scheduling And Routing, Kerem Can Manalp, Ansel Kaplan Erol, Kutluhan Erol, Cem Evrendi̇lek

Turkish Journal of Electrical Engineering and Computer Sciences

The workforce scheduling and routing problem (WSRP) involves assigning tasks across multiple locations while accounting for varying travel times, service durations, time windows, and skill requirements in a wide range of industries, from healthcare to telecommunications. This paper presents a mixed-integer programming model for the WSRP that balances the trade-off between cost and customer satisfaction using a score-generation function and subsequently evaluates the trade-off between solution quality and computation time for several algorithms on well-known datasets. We demonstrate that our model effectively balances cost, service-level agreement satisfaction, and task priorities while providing high-quality solutions in a timely manner. Observing that …


Cnkg: Harnessing Large Language Models For Cognitive Neuroscience Knowledge Graph Construction, Ali Sarabadani, Kheirollah Rahsepar Fard, Hamid Dalvand Jul 2026

Cnkg: Harnessing Large Language Models For Cognitive Neuroscience Knowledge Graph Construction, Ali Sarabadani, Kheirollah Rahsepar Fard, Hamid Dalvand

Turkish Journal of Electrical Engineering and Computer Sciences

Textual resources are among the most valuable sources of information in cognitive neuroscience (CN) for understanding and investigating brain activity and cognitive processes. Extracting and constructing knowledge graphs (KGs) from these texts can facilitate medical research by providing deeper insights into neurological diseases and brain function. In recent years, the use of large language models (LLMs) in natural language processing (NLP) has become increasingly widespread, significantly enhancing the extraction of meaningful information from large volumes of text. This study proposes a novel approach for constructing and evaluating a specialized knowledge graph, termed the cognitive neuroscience knowledge graph (CNKG), from scientific …


Erratum To “Sgsc-Kko-Lstm: A Deeplearning Classifier Model For Smart Grid” [Turkish Journal Of Electrical Engineering & Computer Sciences 34 (2) 2026 185-213], Samaniba Imchen, Dushmanta Kumar Das Jul 2026

Erratum To “Sgsc-Kko-Lstm: A Deeplearning Classifier Model For Smart Grid” [Turkish Journal Of Electrical Engineering & Computer Sciences 34 (2) 2026 185-213], Samaniba Imchen, Dushmanta Kumar Das

Turkish Journal of Electrical Engineering and Computer Sciences

The first and second authors were incorrectly ordered in the article PDF due to a typesetting error. To rectify this oversight and ensure the accuracy of the published work, the author order have been corrected as follows: 1. Samaniba Imchen – First Author 2. Dushmanta Kumar Das – Second Author

A link to the original article can be found at: https://doi.org/10.55730/1300-0632.4170


A Revenue-Driven Approach For Enhanced Task Utilization In Vehicular Cloud Computing, Ashish Singh Saluja, Satyabrata Das, Sanjib Kumar Nayak, Sohan Kumar Pande Jul 2026

A Revenue-Driven Approach For Enhanced Task Utilization In Vehicular Cloud Computing, Ashish Singh Saluja, Satyabrata Das, Sanjib Kumar Nayak, Sohan Kumar Pande

Turkish Journal of Electrical Engineering and Computer Sciences

Vehicular networks support intelligent transportation through vehicle-to-roadside Units (V2R) and vehicle-to-vehicle (V2V) communication but face challenges from dynamic topologies, limited RSU coverage, and bandwidth scarcity, which impact service delivery and revenue. RDA-ITU addresses these challenges by integrating V2R and V2V paradigms to maximize RSU revenue, enhance service availability, and improve system efficiency. It dynamically allocates services based on real-time network conditions and vehicle mobility, leveraging V2V relays to optimize both RSU-direct and cooperative communication. Through extensive simulations, RDA-ITU significantly outperforms four baselines: RBSM, VVMM-U, VVMM-LW, and VVMM-MA. It achieves 81.1% higher total revenue, 154.8% more completed requests, and 103.6% higher …


Scalefusion: Hierarchical Feature Aggregation For Unified Multiscale Object Detection, Ayşenur Yaylaci, Berru Kaya, Mehmet Kiliçarslan Jul 2026

Scalefusion: Hierarchical Feature Aggregation For Unified Multiscale Object Detection, Ayşenur Yaylaci, Berru Kaya, Mehmet Kiliçarslan

Turkish Journal of Electrical Engineering and Computer Sciences

Detecting objects across a wide range of scales, particularly small ones, remains a significant challenge in computer vision. Existing methods often improve small object detection at the cost of performance on larger objects or introduce significant computational overhead through external techniques like image slicing. This paper introduces ScaleFusion, a novel, unified, end-to-end object detection architecture designed to provide robust performance across all scales within a single model. The core of our approach is a hierarchical feature aggregation strategy structured like a tree. ScaleFusion processes an image by running a shared backbone network only on fine-grained patches at the lowest level …


Swindeitvit: A Soft Voting Vision Transformer Ensemble For Accurate And Explainable Solar Panel Fault Detection, Mahe Zabin Jul 2026

Swindeitvit: A Soft Voting Vision Transformer Ensemble For Accurate And Explainable Solar Panel Fault Detection, Mahe Zabin

Turkish Journal of Electrical Engineering and Computer Sciences

Solar panels are becoming very essential in providing sustainable energy but they are usually affected by defects on the surface like dust, snow, bird droppings, physical damages and electrical faults which interfere with their performance. These faults must be identified accurately and in a timely manner to enhance energy efficiency, lower the maintenance cost, and supplement the traditional manual methods of inspection which are labor-intensive, time-consuming and subject to human errors in judgment. The most common methods, such as traditional CNNs and hybrid architectures tend to be less accurate, less explainable and cannot be properly evaluated to be deployed in …


Llm-As-A-Judge For Infection Prevention And Control And Antimicrobial Resistance Impact: Comparing Three Main Llms Vs. Human Experts' Assessment, Marcello Di Pumpo, Leonardo Villani, Maria Rosaria Gualano, Danilo Buonsenso, Francesca Raffaelli, Daniele Donà, Patrizia Laurenti, Vittorio Maio, Stefania Boccia, Walter Ricciardi Jul 2026

Llm-As-A-Judge For Infection Prevention And Control And Antimicrobial Resistance Impact: Comparing Three Main Llms Vs. Human Experts' Assessment, Marcello Di Pumpo, Leonardo Villani, Maria Rosaria Gualano, Danilo Buonsenso, Francesca Raffaelli, Daniele Donà, Patrizia Laurenti, Vittorio Maio, Stefania Boccia, Walter Ricciardi

College of Population Health Faculty Papers

BACKGROUND: Large language models (LLMs) are increasingly used to generate health information, yet their reliability as evaluators remains unclear. This study investigated the feasibility of an LLM-as-a-judge methodology in the context of infection prevention and antimicrobial resistance (AMR), comparing automated ratings with human expert benchmarks.

METHODS: We performed a secondary analysis of an expert-annotated dataset of health messages. Three leading LLMs (ChatGPT, Claude, Gemini) independently evaluated the same messages using an adapted DISCERN tool across five domains: information reliability, quality, AMR impact, persuasiveness, and overall score. We utilized descriptive statistics, intra-rater reliability tests, and mixed-effects ordinal regression to analyze divergence …


Contemporary Cybersecurity Challenges In Emerging Technologies: A Systematic Literature Analysis, Faztudo Languisse Prof Jul 2026

Contemporary Cybersecurity Challenges In Emerging Technologies: A Systematic Literature Analysis, Faztudo Languisse Prof

Journal of Cybersecurity Education, Research and Practice

The accelerating convergence of artificial intelligence (AI), the Internet of Things (IoT), cloud computing, blockchain, and quantum computing has fundamentally transformed the global threat landscape, introducing cybersecurity challenges of unprecedented complexity and scale. This systematic literature review synthesizes findings from peer-reviewed publications, institutional reports, and regulatory documents published primarily between 2020 and 2025 to provide an integrated analysis of contemporary cybersecurity challenges across five key emerging technology domains. The review identifies critical vulnerabilities inherent to each domain, documents the evolution of threat actors and attack methodologies — including AI-powered ransomware, adversarial machine learning, and harvest-now-decrypt-later quantum attacks — and evaluates …


Learning Programming In Informal Spaces: Using Emotion As A Lens To Understand Novice Struggles On R/Learnprogramming, Alif Al Hasan, Subarna Saha, Mia Mohammad Imran Jul 2026

Learning Programming In Informal Spaces: Using Emotion As A Lens To Understand Novice Struggles On R/Learnprogramming, Alif Al Hasan, Subarna Saha, Mia Mohammad Imran

Computer Science Faculty Research & Creative Works

Novice programmers experience emotional difficulties in informal online learning environments, where Confusion and Frustration can hinder motivation and learning outcomes. This study investigates novice programmers' emotional experiences in informal settings, identifies causes of emotional struggle, and explores design opportunities for affect-aware support systems. We manually annotated 1,500 posts from r/learnprogramming using the Learning-Centered Emotions framework, applying clustering, and axial coding. Confusion, Curiosity, and Frustration dominated emotional experiences, sometimes co-occurring and linked to early learning stages. Positive emotions were infrequent. The primary emotional triggers included ambiguous errors, unclear learning pathways, and misaligned resources. We identify five key areas where novice programmers …


Re: Conditional Approval Letter For The Butte Priority Soils Operable Unit Insufficiently Reclaimed Sites Quality Assurance Project Plan, Molly Roby Jul 2026

Re: Conditional Approval Letter For The Butte Priority Soils Operable Unit Insufficiently Reclaimed Sites Quality Assurance Project Plan, Molly Roby

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.


Re: Conditional Approval Letter For The Butte Priority Soils Operable Unit Unreclaimed Sites Quality Assurance Project Plan, Emma Rott Jul 2026

Re: Conditional Approval Letter For The Butte Priority Soils Operable Unit Unreclaimed Sites Quality Assurance Project Plan, Emma Rott

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.


Re: Conditional Approval Letter For The Butte Priority Soils Operable Unit Unreclaimed Sites Quality Assurance Project Plan, Emma Rott Jul 2026

Re: Conditional Approval Letter For The Butte Priority Soils Operable Unit Unreclaimed Sites Quality Assurance Project Plan, Emma Rott

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.


Experimental And Density Functional Theory Study Of The Structural, Optical, And Electronic Properties Of La2Nimno6 And Nd2Nimno6 Double Perovskite Ceramics, Mahmoud S. Alkathy, Anibal Thiago Bezerra, Person Pereira Neves, Mariama Rebello De Sousa Dias, Alexandre José Gualdi, Marco Daldin Teodoro, Valmo R. Mastelaro, José A. Eiras Jul 2026

Experimental And Density Functional Theory Study Of The Structural, Optical, And Electronic Properties Of La2Nimno6 And Nd2Nimno6 Double Perovskite Ceramics, Mahmoud S. Alkathy, Anibal Thiago Bezerra, Person Pereira Neves, Mariama Rebello De Sousa Dias, Alexandre José Gualdi, Marco Daldin Teodoro, Valmo R. Mastelaro, José A. Eiras

Physics Faculty Publications

Despite extensive study of La2NiMnO6 double perovskites, a systematic understanding of the effects of A-site rare-earth substitution on coupled structural, electronic, and optical properties remains lacking. Here, we provide the first integrated experimental-computational comparison of La2NiMnO6 (LaNMO) and Nd2NiMnO6 (NdNMO), establishing quantitative structure–property relationships. Rietveld refinement demonstrates that Nd3+ substitution amplifies MnO6 and NiO6 octahedral distortions 5-fold (ΔdMn: 4.69 × 10–4 to 23.9 × 10–4; ΔdNi: 1.18 × 10–4 to 5.91 × 10–4), reduces Mn–O–Ni bond …


Signal And Substance: Why Methodological Sophistication Fails To Guarantee Inference, Aamir Rashid, Rizwana Rasheed Jul 2026

Signal And Substance: Why Methodological Sophistication Fails To Guarantee Inference, Aamir Rashid, Rizwana Rasheed

Publications and Research

Despite increasing analytical sophistication, empirical research in organization studies continues to suffer from fragile inference, uneven theoretical accumulation, and contested credibility. This paper seeks to explain why these problems persist by shifting attention from authors’ methodological choices to the evaluative dynamics of peer review. Adopting a conceptual and theory-analytic approach, the paper theorizes peer review as an inferential gatekeeping system. Drawing on research design, theory evaluation, and philosophy-of-science literatures, this study develops an analytical framework to examine how evaluative routines shape what constitutes empirical rigor during the review process. The analysis identifies five recurring reviewer blind spots: inferential scope inflation, …


Decoding The Allosteric Grammar Of Protein Kinases: A Dual-Stream Framework Integrating Protein Language Models And Energy Landscape Frustration Analysis, Will Gatlin, Max Ludwick, Lucas Turano, Brandon Foley, Kamila Riedlova, Vít Škrhák, Marian Novotný, David Hoksza, Gennady M. Verkhivker Jul 2026

Decoding The Allosteric Grammar Of Protein Kinases: A Dual-Stream Framework Integrating Protein Language Models And Energy Landscape Frustration Analysis, Will Gatlin, Max Ludwick, Lucas Turano, Brandon Foley, Kamila Riedlova, Vít Škrhák, Marian Novotný, David Hoksza, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

The spatial and energetic encoding of allosteric regulatory sites remains a major challenge in structural biology, frequently representing a “blind spot” for sequence-based artificial intelligence (AI) models. We present a protein language model (PLM)-guided approach complemented by the energy landscape frustration analysis as a dual-stream framework to investigate the relationship between AI prediction of binding sites and biophysical organization of regulatory pockets across the human kinome. By probing a fine-tuned residue-level PLM classifier across 453 kinase structures, a clear performance gap is discovered between highly predictable orthosteric pockets (Types I, I.5, and II) and poorly resolved distal allosteric sites (Type …