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Issue 38 Dec 2023

Issue 38

The Synapse: Intercollegiate science magazine

No abstract provided.


Coastal Wetland Restoration Through The Lens Of Odum's Theory Of Ecosystem Development, Friedrich W. Keppeler, Annette S. Engel, Linda M. Hooper-Bùi, Paola C. López-Duarte, Charles W. Martin, Jill A. Olin, Katelyn J. Lamb, Michael J. Polito, Nancy N. Rabalais, Multiple Additional Authors Dec 2023

Coastal Wetland Restoration Through The Lens Of Odum's Theory Of Ecosystem Development, Friedrich W. Keppeler, Annette S. Engel, Linda M. Hooper-Bùi, Paola C. López-Duarte, Charles W. Martin, Jill A. Olin, Katelyn J. Lamb, Michael J. Polito, Nancy N. Rabalais, Multiple Additional Authors

Environmental Science and Management Faculty Publications and Presentations

Advancing ecological restoration assessments requires a more detailed consideration of species interactions and ecosystem processes. Most restoration projects rely on a few metrics not always directly linked with ecological theory. Here, we used Odum's theory of ecosystem development to assess and compare the ecosystem structure and services of created marshes (4–6 years old) with preexisting, reference marshes in a brackish water region of the Mississippi River Delta. We built ecosystem models for created and reference marshes that integrated large datasets of stomach contents, stable isotopes, and taxa abundances. Despite strong resemblance in community structure, created marshes were at an earlier …


How Beavers (Castor Canadensis) Affect Habitat Availability For Two Native Oregon Turtles: Actinemys Marmorata And Chrysemys Picta Bellii, Rodé Krige Dec 2023

How Beavers (Castor Canadensis) Affect Habitat Availability For Two Native Oregon Turtles: Actinemys Marmorata And Chrysemys Picta Bellii, Rodé Krige

University Honors Theses

Oregon is home to two native freshwater turtle species: the northwestern pond turtle and the western painted turtle. Both turtles are Oregon conservation strategy species with a status rating of sensitive, indicating declining populations. Oregon's decline in these turtle's populations is thought to be predominantly due to loss and degradation of habitat that results from development and urbanization. Beavers' ability to dam streams and create ponds may be creating habitat usable by turtles, but the relationship is under-studied. This study assessed water temperature, basking habitat, and overall turtle habitat suitability at beaver-dammed and control ponds in Portland, Oregon. Average basking …


Enhancing Urban Water Quality Through Biological-Chemical Treatment: Aquatic Macroinvertebrate Community And Temporal Chlorophyll-A Response, Matthew Chaffee Dec 2023

Enhancing Urban Water Quality Through Biological-Chemical Treatment: Aquatic Macroinvertebrate Community And Temporal Chlorophyll-A Response, Matthew Chaffee

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

With a growing human population, urbanization is impeding a plethora of natural waterways. Of these, urban ponds play a vital role in nutrient sequestration, flood prevention, and habitat sanctuaries. However, nutrient loading can reduce habitat effectiveness and promote harmful algae blooms. To reduce internal nutrient loads, a biological-chemical treatment strategy consisting of floating treatment wetlands (FTWs) and lanthanum were applied to two urban retention ponds, Densmore and Wilderness Ridge Ponds. To measure effectiveness, chlorophyll-a samples were collected and correlated with Sentinel-2. A novel band algorithm termed 3BR1 produced a strong correlation (R2 = 0.72) to physical chlorophyll-a …


Analyzing The Impacts Of Beaver Dam And Beaver Dam Analog Complexes To Stream Ecology Within The Intermountain West, J. Marshall Wolf Dec 2023

Analyzing The Impacts Of Beaver Dam And Beaver Dam Analog Complexes To Stream Ecology Within The Intermountain West, J. Marshall Wolf

All Graduate Theses and Dissertations, Fall 2023 to Present

Streams, rivers, and their floodplains throughout the world are impaired due to human modifications. Recent research has demonstrated that restoration projects prioritizing the proper functioning of ecosystems have better restoration outcomes than projects which focus on restoring form alone. Throughout North America, beaver-mediated restoration is becoming a leading method for improving the functioning of stream ecosystems that are in a degraded state. In areas where beaver are absent or the habitat is too degraded to currently permit their dam building, man-made beaver dam analogs (BDAs) are being used to restore stream habitat with an eye to future beaver recolonization. However, …


Optimal Stopping Of Multi-Robot Exploration For Unknown, Bounded Environments, Trey D. Crowther Dec 2023

Optimal Stopping Of Multi-Robot Exploration For Unknown, Bounded Environments, Trey D. Crowther

All Graduate Theses and Dissertations, Fall 2023 to Present

Limited resources and uncertainty pose a substantial problem for multi-robot exploration of unknown environments. This research paper looks to determine the optimal time to terminate robot exploration while maximizing information gathered. Whilst making this determination, the system's resources and capabilities must be taken into account. To see if our strategy works, we ran many simulations in varying environments. The results of this research are important for real-world uses like robot exploration, search and rescue missions, and automated surveillance. Determining when to stop exploring can help the system save resources, explore faster, and make better decisions.


Electrolysis Degradation Of Cyanuric Acid In Wastewater At Cu/Go Cathodes, Chioma Chinwe Nwakanobi Dec 2023

Electrolysis Degradation Of Cyanuric Acid In Wastewater At Cu/Go Cathodes, Chioma Chinwe Nwakanobi

Theses and Dissertations

This work evaluates the development of electrochemical processes for the oxidative degradation of persistent organic chemicals in waste waters, specifically the oxidation of cyanuric acid in the presence of NaCl at Cu/GO cathodes and Ti anodes. The experiment used a graphene oxide doped copper mesh cathode to examine different concentrations of cyanuric acid (30 mg/L, 40 mg/L, and 50 mg/L) and various concentrations of NaCl electrolyte (0.007mol/L, 0.03mol/L, 0.07mol/L, 0.1mol/L, and 0.2mol/L). In addition, the effect of pH (2, 4, 6, and 8), and applied current (0.200A, 0.150A and 0.100A) were studied. The Cu/GO electrode played a central role in …


Enhancing Time Series Hashing Performance Via Deep Orthogonal Hashing, Mahmudul Hasan Robin Dec 2023

Enhancing Time Series Hashing Performance Via Deep Orthogonal Hashing, Mahmudul Hasan Robin

Theses and Dissertations

Deep hashing has been widely used for efficient retrieval and classification of high-dimensional data like images and text. However, its application to time series data is still challenging due to the data’s temporal nature. To tackle this issue, a new deep hashing method has been proposed that generates efficient hash codes and enhances the time series hashing performance using a ResNet model with Orthohash (Cosine Similarity Loss). The proposed method uses one loss architecture while using ResNet model for efficient hashing. It uses the Character Trajectories dataset to extract discriminative features from the time series data. These features are then …


A Combinatorial Proof Of Supercranks For Partitions With A Fixed Number Of Parts, Jacob J. Gutierrez Dec 2023

A Combinatorial Proof Of Supercranks For Partitions With A Fixed Number Of Parts, Jacob J. Gutierrez

Theses and Dissertations

In a previous paper by Eichhorn and Kronholm, a selection of supercranks for p(n,m) was established by generating functions. In this paper we will reprove this result with combinatorial witnesses for the selection of supercranks via integer lattice points.


Synthesis Of Bacterial Glycerophospholipids For Biomembrane Model Studies: A Means To Advanced Biofuels, Felix Adulley Dec 2023

Synthesis Of Bacterial Glycerophospholipids For Biomembrane Model Studies: A Means To Advanced Biofuels, Felix Adulley

Electronic Theses and Dissertations

To reduce reliance on fossil fuels, sustainable biofuels are being pursued, especially advanced biofuels like 1-butanol that have higher energy content and greater compatibility with existing infrastructure than ethanol. A persistent challenge is the yield-limiting toxicity of biofuels and process solvents, such as tetrahydrofuran, to the microbes that ferment biomass into biofuel. The cell membrane is a focal point of toxicity, and understanding how it interacts with fuels and solvents is key to improving yield. Phospholipid bilayers are the core of biomembranes, and model biomembranes of defined composition provide the ideal platform for biophysical studies. To this end, glycerophospholipids characteristic …


Isotopic Ecology Of Bison And Bootherium At Big Bone Lick, Kentucky, Frances Stephenson Dec 2023

Isotopic Ecology Of Bison And Bootherium At Big Bone Lick, Kentucky, Frances Stephenson

Electronic Theses and Dissertations

Big Bone Lick (BBL) is a late Pleistocene and Holocene fossil locality in the Ohio River valley of Kentucky. This study utilized stable isotopes (δ13C, δ18O, and 87Sr/86Sr) in tooth enamel to reconstruct mobility and diet in Bison, as well as diet in Bootherium bombifrons. Isotopic results from seven Bison and two B. bombifrons are reported. Results suggest Pleistocene Bison and Bootherium occupied different dietary niches. Although both had C3-dominated diets, Bison occupied more open environments than B. bombifrons. Two bison from the late Holocene deposit had diets that consisted …


Design And Characterization Of A Novel Eef2k Degrader With Potent Therapeutic Efficacy Against Triple-Negative Breast Cancer, Changxin Zhong, Rongfeng Zhu, Ting Jiang, Sheng Tian, Xiaobao Zhao, Xiaoya Wan, Shilong Jiang, Zonglin Chen, Rong Gong, Linhao He, Jin-Ming Yang, Na Ye, Yan Cheng Dec 2023

Design And Characterization Of A Novel Eef2k Degrader With Potent Therapeutic Efficacy Against Triple-Negative Breast Cancer, Changxin Zhong, Rongfeng Zhu, Ting Jiang, Sheng Tian, Xiaobao Zhao, Xiaoya Wan, Shilong Jiang, Zonglin Chen, Rong Gong, Linhao He, Jin-Ming Yang, Na Ye, Yan Cheng

Markey Cancer Center Faculty Publications

Dysregulated eEF2K expression is implicated in the pathogenesis of many human cancers, including triple-negative breast cancer (TNBC), making it a plausible therapeutic target. However, specific eEF2K inhibitors with potent anti-cancer activity have not been available so far. Targeted protein degradation has emerged as a new strategy for drug discovery. In this study, a novel small molecule chemical is designed and synthesized, named as compound C1, which shows potent activity in degrading eEF2K. C1 selectively binds to F8, L10, R144, C146, E229, and Y236 of the eEF2K protein and promotes its proteasomal degradation by increasing the interaction between eEF2K and the …


Analysis And Assessment Of Land Use / Land Cover Impact On Human And Natural Ecosystems In The Salton Sea Watershed, 2013 - 2021, Diego Ramirez Dec 2023

Analysis And Assessment Of Land Use / Land Cover Impact On Human And Natural Ecosystems In The Salton Sea Watershed, 2013 - 2021, Diego Ramirez

Electronic Theses, Projects, and Dissertations

This study represents an interdisciplinary analysis of the changing landscape of the Salton Sea Watershed from 2013 to 2021, focusing on land use land cover (LULC) category changes, climatic variations, and socioeconomic factors. The findings of this research show a shift in land cover categories, portrayed by the changes of natural landscapes and vegetative areas into rapidly increasing urbanized expansion and increased impervious surfaces. These changes pose concerns about increased temperature in the region, a decrease in overall water availability and groundwater infiltration, and an increase in pollution. The study explores 10 sub-watersheds within the Salton Sea Watershed basin, focusing …


Analysis Of Mitochondrial Dna Sequence Data Demonstrates That Monophyly Of Myotis Occultus Is Complicated By Greater Sampling Of Myotis Lucifugus, Jeffrey M. Lorch, Daniel R. Taylor, Antoinette J. Piaggio Dec 2023

Analysis Of Mitochondrial Dna Sequence Data Demonstrates That Monophyly Of Myotis Occultus Is Complicated By Greater Sampling Of Myotis Lucifugus, Jeffrey M. Lorch, Daniel R. Taylor, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Abstract

The validity of Myotis occultus as a species unique from Myotis lucifugus has been a source of debate. Most recently, many authorities treat M. occultus as a distinct species, at least in part because a previous study showed that M. occultus and M. l. carissima (the subspecies that occurs in closest geographic proximity to M. occultus) form separate monophyletic clades based on sequences of two mitochondrial genes (cytochrome-b [cytb] and cytochrome oxidase subunit II [COII]). We re-evaluated the phylogenetic relationship between M. occultus and M. lucifugus based on mitochondrial sequences …


The Effects Of Salt Marsh Restoration On The Hydrology Of Salt Marsh Channels, Isis Kontas Dec 2023

The Effects Of Salt Marsh Restoration On The Hydrology Of Salt Marsh Channels, Isis Kontas

University Honors Theses

Salt marshes produce many ecosystem services, from water purification to protection from hurricanes. Despite their benefits, salt marshes have been impacted negatively by human activities. There are many salt marsh restoration projects that intend to bring back all ecological functions and services. Quantifiable measurements are needed to evaluate the effectiveness of such restoration efforts. Earlier work by Reagan Thomas demonstrated what happens to the hydrology of salt marsh channels when they are adjacent to restored salt marshes. This study builds on Thomas’ work and uses the sinuosity of channels as a quantitative, representative metric of salt marsh hydrology restoration effectiveness. …


Post-Wildfire Effects On A Headwater Stream In The San Bernardino National Forest, Kelley Giron Dec 2023

Post-Wildfire Effects On A Headwater Stream In The San Bernardino National Forest, Kelley Giron

Electronic Theses, Projects, and Dissertations

Southern California has experienced prolonged drought conditions that have supported frequent wildfires that adversely impact ecosystems, natural resources, and human development. A primary consequence of these events is the impact on water quality and quantity. Of equal concern is evaluating how diverse land use configurations within a watershed can alter the physio-chemical properties of headwater reaches where drought and wildfire conditions are prevalent. To better understand the extent to which wildfires impact water quality and quantity across a headwater watershed, this study investigates wildfire impacts from the 2021 South Fire to Lytle Creek, a headwater stream of the Santa Ana …


Through The Lens Of A Naturalist: How Learning About Nature Promotes Nature Connectedness Via Awe, Shu Tian Ng, Angela K. Y. Leung, Sarah Hian May Chan Dec 2023

Through The Lens Of A Naturalist: How Learning About Nature Promotes Nature Connectedness Via Awe, Shu Tian Ng, Angela K. Y. Leung, Sarah Hian May Chan

Research Collection School of Social Sciences

Environmental educators stress the importance of engaging with the wonders of the Earth in promoting nature connectedness. However, it remains unclear if learning about nature has an incremental effect beyond mere exposure to nature and what psychological mechanism can explain such a learning effect if it exists. To fill this gap, we propose a mediation model in which learning about nature promotes a sense of awe—a self-transcendent emotion associated with the recognition of vastness in nature. A sense of awe, in turn, promotes nature connectedness. Study 1 employed a cross-sectional survey and offered preliminary support for the proposed model, with …


Low Reynolds Number Locomotion Near Interfaces In Two-Fluid Media, Avriel Rowena Mae Cartwright Dec 2023

Low Reynolds Number Locomotion Near Interfaces In Two-Fluid Media, Avriel Rowena Mae Cartwright

Theses and Dissertations

Microorganisms often swim within complex fluid environments composed of multiple materials with very different properties. Biological locomotion, including swimming speed, is significantly impacted by the physical composition and rheology of the surrounding fluid environment, as well as the presence of phase boundaries and free interfaces, across which physical properties of the fluid media may vary greatly. Through computational simulations, we first investigate the classical Taylor’s swimming sheet problem near interfaces within multi-fluid environments using a two-fluid immersed boundary method. The accuracy of the methodology is illustrated through comparisons with analytical solutions. Our simulation results indicate that the interface dynamics and …


Interactions Between Sediment Mechanical Structure And Infaunal Community Structure Following Physical Disturbance, William Cyrus Roger Clemo Dec 2023

Interactions Between Sediment Mechanical Structure And Infaunal Community Structure Following Physical Disturbance, William Cyrus Roger Clemo

Graduate Theses and Dissertations (2019 - present)

Shallow, river-influenced coastal sediments are important for global carbon storage and nutrient cycling and provide a habitat for diverse communities of invertebrates (infauna). Elevated bed shear stress from extreme storms can resuspend, transport, and deposit sediments, disrupting the cohesive structure of muds, and sorting and depositing sand eroded from beaches. These physical disruptions can also resuspend or smother infauna, decreasing abundances and changing community structure. Infaunal activities such as burrowing, tube construction, and feeding can impact sediment structure and stability. However, little is known about how physical disturbance impacts short and long-term sediment habitat suitability and whether disturbance-tolerant infauna influence …


Gravel Conveyance System: An Evaluation On E. Coli Removal Capabilities, Madison Grace Dec 2023

Gravel Conveyance System: An Evaluation On E. Coli Removal Capabilities, Madison Grace

Graduate Theses and Dissertations (2019 - present)

In many rural, low-income communities such as the Black Belt of Alabama, there is a lack of wastewater infrastructure and solutions leaving homeowners non-compliant to state and federal law and with potential health risks on their property. New regulations have allowed for onsite, surface discharge for single family homes that are not connected to a centralized sewer or large flow development. These new regulations also contain strict disinfection criteria for the treated wastewater that will be discharged. A low-cost and low-maintenance treatment system that provides adequate disinfection is necessary to allow homeowners to take advantage of the new opportunity for …


Green Analytical Methods For The Determination Of Perfluorocarboxylic Acids (Pfcas) And Fluorotelomer Alcohols (Ftohs) In Water, Ahsan Habib Dec 2023

Green Analytical Methods For The Determination Of Perfluorocarboxylic Acids (Pfcas) And Fluorotelomer Alcohols (Ftohs) In Water, Ahsan Habib

Open Access Theses & Dissertations

Per- and polyfluoroalkyl substances (PFAS) are a large group of synthetic organic compounds manufactured for their heat, water, and stain-resistant properties. PFAS can be found ubiquitously in the environment because they are widely used in everyday consumer products such as fast-food wrappers, non-stick cookware, stain-resistant products, cosmetics, aqueous film-forming foams, etc. As a result, PFAS are commonly detected in surface water, wastewater, and biosolids from wastewater treatment plants (WWTPs). These are the direct sources of PFAS contamination in drinking water supplies, which are substantial sources of human exposure. Among these PFAS chemicals, two major groups are perfluoroalkyl carboxylic acids (PFCAs) …


Tree-Ring Reconstruction Of Ouachita River Streamflow, Keaton Cade Jenkins-Joyce Dec 2023

Tree-Ring Reconstruction Of Ouachita River Streamflow, Keaton Cade Jenkins-Joyce

Graduate Theses and Dissertations

The Ouachita River drains the Ouachita Mountains and Upper Coastal Plain in Arkansas and Louisiana. The Ouachita River is used for navigation, power generation, recreation, water supply, and wastewater treatment. The river has been prone to low flows during drought and extreme flooding, which were principal justifications for the construction of three large multipurpose dams on the stream. It is likely that the use of the Ouachita River will be stressed by future population growth, economic expansion, and climate change. For this study, tree-ring chronologies from various locations in and near the Ouachita River drainage basin were used to reconstruct …


The Evaluation Of Feed Additives On Reducing Enteric Methane Production From Cattle, Reba L. Colin Dec 2023

The Evaluation Of Feed Additives On Reducing Enteric Methane Production From Cattle, Reba L. Colin

Department of Animal Science: Dissertations, Theses, and Student Research

Environmental sustainability can be positively impacted by the inclusion of feed additives to reduce enteric methane production from cattle. Methane production can be affected by feed additives that either alter the rumen environment or act as methanogenesis inhibitors. A reduction in methane from cattle can contribute to meeting carbon neutrality.

A metabolism study was conducted to evaluate Alga 1.0, a product containing bromoform, fed to cattle to evaluate the effects on gas emissions. Treatments were (0, 69, or 103 g/d Alga 1.0) fed in a corn-based diet. Headbox-style indirect calorimeters were used to measure gas emissions. Feeding Alga 1.0 linearly …


Occurrence Of Emerging Contaminants In Greater Houston Watersheds, Risk Assessment, And Toxicological Effects, Sekinat Oluwakemi Atobiloye Dec 2023

Occurrence Of Emerging Contaminants In Greater Houston Watersheds, Risk Assessment, And Toxicological Effects, Sekinat Oluwakemi Atobiloye

Dissertations (2016-Present)

Rapid industrialization and urbanization within the Greater Houston area have driven a surge in anthropogenic activities that affects the burgeoning population. This region stands as one of the most densely inhabited metropolises in the United States, experiencing a substantial population growth of 9.8% from 2010 to 2020, with the population expanding from 5.92 million to 7.14 million. This population boom has been accompanied by an increased reliance on modern conveniences, leading to escalated production and utilization of chemicals such as personal care products, pharmaceuticals, pesticides, and heavy metals, all of which pose potential threats to the environment. Although these products …


Community Conservation Works! A Success Story In Reforesting Australia’S Wet Tropics, Soleil Laurin, Clara Sorensen, Shannon Mccord, Hunter Miles Dec 2023

Community Conservation Works! A Success Story In Reforesting Australia’S Wet Tropics, Soleil Laurin, Clara Sorensen, Shannon Mccord, Hunter Miles

The Synapse: Intercollegiate science magazine

No abstract provided.


Save The Wasps: Conservation Struggles In Protecting An Animal With A Bad Reputation, Megan Tiffany Dec 2023

Save The Wasps: Conservation Struggles In Protecting An Animal With A Bad Reputation, Megan Tiffany

The Synapse: Intercollegiate science magazine

No abstract provided.


Immunity Revolution: Training Innate Immunity For Enhanced Defense, Minh Tran Ha Dec 2023

Immunity Revolution: Training Innate Immunity For Enhanced Defense, Minh Tran Ha

The Synapse: Intercollegiate science magazine

No abstract provided.


State Of The Fisheries: Status Reports And Aquatic Resources Of Western Australia 2022/23, S.J. Newman, K.G. Santoro, D.J. Gaughan Dec 2023

State Of The Fisheries: Status Reports And Aquatic Resources Of Western Australia 2022/23, S.J. Newman, K.G. Santoro, D.J. Gaughan

Status Reports of the Fisheries and Aquatic Resources

Aquatic resources within Western Australia (WA) are in good condition, and this has positioned WA as a global leader in sustainable fisheries management. The sustainable fisheries of WA continue to support our strong economy and regional communities. Nonetheless, the lack of a consistent approach to build in the knowledge of Traditional Owners remains a gap in our longer term fisheries science in Western Australia.

Climate change and climate variability continues to impact fish stocks, challenging our ability to effectively monitor, assess, and manage fish stocks. We are continually working with our stakeholders, and the broader community to be adaptive, responsive, …


Production, Consumption, And Market Supply Of Edible Crickets: Insights From East Africa, Arnold L. Musungu, Beatrice W. Muriithi, Changeh J. Ghemoh, Dorothy Nakimbugwe, Chrysantus M. Tanga Dec 2023

Production, Consumption, And Market Supply Of Edible Crickets: Insights From East Africa, Arnold L. Musungu, Beatrice W. Muriithi, Changeh J. Ghemoh, Dorothy Nakimbugwe, Chrysantus M. Tanga

All Peer-Reviewed Publications

Globally, crickets are gaining recognition as a valuable alternative protein source for human consumption due to their lower resource requirement and ecological footprint compared to traditional livestock. In this paper, we examine strategies that may expedite the sustainable domestication of crickets as a food source. Using survey data from 306 households in western Kenya, we find that supplying cricket production starter kits, granting access to credit facilities, encouraging participation in farmer groups, and fostering partnerships can enhance the adoption of cricket farming. Moreover, we provide new evidence that institutional training significantly increases cricket yields while embracing cricket consumption (i.e. entomophagy) …


Understanding The Interaction Of Environmental Contaminants With Polystyrene Nanoparticles And Dna Using Nuclear Magnetic Resonance Spectroscopy And Density Functional Theory, Saduni Arachchi Dec 2023

Understanding The Interaction Of Environmental Contaminants With Polystyrene Nanoparticles And Dna Using Nuclear Magnetic Resonance Spectroscopy And Density Functional Theory, Saduni Arachchi

All Dissertations

The objective of the thesis is to study the effect of environmental pollutants on polystyrene nanoparticles and biomolecules. This is done in two different techniques, particularly NMR and density functional theory. In this thesis, we use a combination of 1H NMR, Saturation-Transfer Difference (STD) NMR and relaxation experiments to study the interactions, kinetics and dynamics of antibiotics with polystyrene nanoparticles. (PS NPs) Density functional theory (DFT) is used to study the binding of commonly used non-oxidative hair dyes to biomolecules (DNA and amino acids) and PS particles.