Digital Commons Network^™

Advancement In Electrochemical Generation-Collection: Snapshot Redox Cycling Voltammetry For Rapid Analysis At Chip-Based, Individually Addressable Microband Electrode Arrays, Blake Aleck Sterling

Graduate Theses and Dissertations

Snapshot redox cycling voltammetry (Snapshot RCV) is introduced as a rapid electrochemical technique that reconstructs the current-potential profile of a redox active species using a microband electrode array. By simultaneously biasing individual generator electrodes alternating in the array to different voltages across the analyte’s potential range while individually holding collector electrodes at a reversing potential, “spatial” voltammetry is achieved in as little as 1 s with the temporal speed of chronoamperometry, rapidly capturing the steady-state redox cycling (RC) profiles. During RC (a mode of generation-collection), the analyte is oxidized (or reduced) at generator electrodes and converted back at neighboring collector …

Evaluating The Effects Of Urbanization On Meiofauna Biodiversity In Chattanooga’S Lentic Ecosystems Through Gis Applications, Keyle M. Bryant

Honors Theses

Urbanization is a leading driver of biodiversity loss in freshwater ecosystems, yet its effects on meiofauna—microscopic invertebrates that serve as key bioindicators of ecosystem health—remain poorly understood in lentic environments. This study evaluated the effects of urbanization on meiofaunal biodiversity in ten lentic waterbodies across Hamilton County, Chattanooga, Tennessee, by integrating environmental DNA (eDNA) metabarcoding, in-situ abiotic measurements, and Geographic Information Systems (GIS)-based land use analysis. Water samples were collected between January and April 2023 and processed using 18S rRNA amplicon sequencing to assess biodiversity as richness (amplicon sequence variants or ASVs, phylogenetic diversity or PD, and community composition). Land …

Resilience By Living With The Land And Community: A Case Study Of A Local Food Forest, Olivia Beck

Honors Theses

Imagine a public space where food, leisure, outdoor activity, and community engagement occur in one place, all in an urban forest ecosystem. For many, this is a hopeful vision of the future, and that is exactly what the idea of an urban food forest provides. In agroecology, a food forest or forest garden consists of planting diverse edible plants and mimicking the patterns of natural ecosystems. The intricate planning and design ensure the forest is self-sustaining, much like a natural forest, making it very resilient once established. However, they face many challenges and take time to grow and develop to …

Insights Into Androgen Receptor Allosteric Modulation By P,P'-Dichlorodiphenyldichloroethylene Binding At The Binding Function-3 Site And Site-Specific Binding Function-3 Mutations, Emanuel Aggeo Flores

Theses and Dissertations

One of DDT’s metabolites, p,p’-dichlorodiphenyldichloroethylene (DDE), has been classified as an endocrine disrupting chemical (EDC) due to its ability to interfere with hormone signaling by binding to nuclear receptors (NR) such as the androgen receptor (AR).

Structurally, the AR contains a ligand-binding domain (LBD) where endogenous steroids bind. Furthermore, the LBD contains a surface binding site known as binding function-3 (BF-3), which studies suggest exerts an allosteric effect on bound DHT when small, hydrophobic molecules bind.

Here, we present a study that examines how specific BF-3 site mutations and DDE binding affect steroid stability within the LBP utilizing computational methods. …

Ecological Insights And Management Implications Of The Global Migratory Connectivity Of Green Turtles, Jaime Restrepo, Dina Nisthar, Harris Wei-Khang Heng, Lily K. Bentley, Corrie Curtice, Sarah Deland, Ei Fujioka, Patrick N. Halpin, Sarah K. Poulin, Roldán A. Valverde

School of Earth, Environmental, & Marine Sciences Faculty Publications

Aim

Green turtles are a widely distributed and highly migratory species; despite extensive data on their movement, there is no species-specific global synthesis on the subject. Based on three decades of published literature and building on previous global analyses, we developed a global network model of migratory connectivity for green turtles to better understand their spatial biology.

Location

Global.

Time Period

1990–2022.

Major Taxa Studied

Green Sea Turtle (Chelonia mydas).

Methods

We conducted a structured literature review extracting georeferenced information on the movement of green turtles from 1990 to 2022, aggregating this information into a single connectivity model, …

Fisheries Management Paper No. 313: Western Australian Statewide Small Pelagic Scalefish Resource Harvest Strategy, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

Harvest strategies for Western Australia’s (WA) aquatic resources are formal documents developed by the Department of Primary Industries and Regional Development (DPIRD, the Department) to support decision-making processes that ensure the outcomes are consistent with the principles of Ecologically Sustainable Development (ESD; Fletcher 2002a) and Ecosystem Based Fisheries Management (EBFM; Fletcher et al. 2012).

Harvest strategies are a key component of all contemporary fishery management systems and a requirement for certification under the Marine Stewardship Council (MSC; Marine Stewardship Council 2018). The objectives of ESD are reflected in the objects of the Fish Resources Management Act 1994 (FRMA).

This Statewide …

The Hitchhiker's Guide To The Host: Fleas And The History Of Pikas In North America, Josh Pletcher

All NMU Master's Theses

Parasite phylogenetics can offer windows into the cryptic evolutionary history of hosts, often highlighting events that are not recorded by the phylogenetics of the host. Pikas (small lagomorphs) host a diverse parasite community comprising endoparasites (e.g., coccidians, nematodes, and cestodes) and ectoparasites (e.g., fleas and mites). Phylogenetic analysis of pika endoparasites has revealed pikas evolved in Asia and colonized North America in two waves, and that contact between these two pika lineages allowed parasites to be transferred from one lineage to another and to survive the extinction of their original host. To uncover these cryptic histories, understanding the biogeography of …

Population Structure And Connectivity Of Atlantic Nurse Sharks (Ginglymostoma Cirratum) In The Bahamas And Outlying Areas, Baylie A. Fadool

School of Natural Resources: Dissertations, Theses, and Student Research

Understanding animal ecosystem dynamics and behavior at the individual and population levels is essential for identifying life-history patterns and important areas for management and conservation. Marine fish species often face minimal geographic barriers to movement, but environmental (temperature, salinity, current) or intrinsic barriers (philopatry, site fidelity) can dictate gene flow. Atlantic nurse sharks (Ginglymostoma cirratum) are an International Union for Conservation of Nature (IUCN) listed ‘vulnerable’ species and present a unique opportunity to investigate patterns of population structure and connectivity in large-bodied sharks. They are benthic and display reproductive philopatry, with recent work suggesting they have the capacity …

Gaining Mussel: Evaluating Reintroduction Success Of Native Freshwater Mussels In Nebraska And Eastern Wyoming, Travis A. Moore

School of Natural Resources: Dissertations, Theses, and Student Research

Freshwater mussels are one of the most imperiled groups of organisms in North America, with over two-thirds of species considered threatened, endangered, or of special concern. These long-lived bivalves are essential to stream ecosystems, acting as filter feeders that improve water quality and as indicators of aquatic health. In Nebraska and Wyoming, native mussel populations have declined sharply due to habitat modification, pollution, and reduced connectivity. Two species of particular concern are the Plain Pocketbook Lampsilis cardium, listed as Tier I at-risk in Nebraska, and the Fatmucket Lampsilis siliquoidea, a Tier II at-risk species. In response, state agencies …

Impact Of Biomass Type On Hydrocarbon Yield And Chain Length Distribution Produced Via Fischer-Tropsch Synthesis, Nicholas R. Hawe

Honors Scholar Theses

This paper investigates the relationship between biomass composition and hydrocarbon yield as well as chain length distribution produced by Fischer-Tropsch synthesis. Through an Aspen Plus model, the conversion of three different biomasses – digestate, sawdust, and corn stover – into hydrocarbon fuel was simulated. The model converts biomass into gaseous and liquid hydrocarbons via various unit operations and reactions. Simulation results highlight the product distribution and hydrocarbon output, allowing for an analysis of hydrocarbon yield and comparison of chain length distributions amongst the three biomasses. Overall, the simulation showed biomass composition had no significant impact on hydrocarbon yield or chain …

Assessing Water Quality And Nitrogen Dynamics In Bahia Grande, Texas Using Field And Remote Sensing Data, Sk Taufiqul Islam

Theses and Dissertations

An 8,220-acre estuary in South Texas, Bahia Grande has recently been restored from a disconnected hypersaline basin to a tidal estuary. A spatially explicit water quality index (WQI) was developed and in situ physicochemical data coupled with remote sensing data from Sentinel-2 were used to determine ecological integrity. A WQI from 29.45-53.20 yielded a spatial distribution of water quality that displayed a non-linear spatial trend throughout the estuary. Water quality close to the Brownsville Ship Channel inlet yielded values of 'Moderate/Stressed' water quality (> 50). These areas represent local zones of disturbance where ammonium concentrations were more than 11 µmol/L. …

A Visit-Count-Based Complete Foraging Strategy For Robot Swarms, Arturo Yahir Gonzalez

Theses and Dissertations

Swarm robotics systems often rely on a balance between exploration and exploitation to perform tasks like Central Place Foraging. While exploitation methods such as pheromone trails and site fidelity are well-studied, the efficiency of the underlying random search exploration remains a challenge, frequently leading to redundant coverage and wasted time as multiple agents repeatedly search the same fruitless areas. This thesis introduces a memory-enhanced exploration strategy designed to improve the efficiency of random search in a swarm of simple robots.

In our proposed algorithm, each robot, constrained with limited memory, periodically logs its recent locations while exploring. This spatial data …

A Novel Approach To Creativity Assessment: Forced Pairwise Ranking With Large Language Models, Phillip R. Gregory Jr

Master's Theses

Assessing creativity at scale remains a persistent challenge in cognitive science, as human raters are costly, slow, and often inconsistent in their judgments. This thesis introduced a novel framework for automated scientific creativity assessment using forced pairwise ranking, in which fine-tuned large language models compared response pairs and determined which was more creative. Five empirical studies were conducted using Llama-2-7B and Llama-2-13B models adapted via LoRA fine-tuning and benchmarked against human scored responses from the Scientific Creative Thinking Test. A regression baseline achieved Pearson �� = .74 on the test set, matching the human inter-rater ceiling reported in the literature. …

Between Chronicle And Legend: A Two-Scene Environment And Visual Effects Examination Of Physical Accuracy And Emotional Exaggeration On The Honey Creek Bridge Collapse, Alison R. Gaddy

All Theses

This thesis explores how truth and dramatization intersect in digital storytelling by comparing realistic and stylized simulations of the Honey Creek bridge collapse within the context of the Kate Shelley animated short. At the core of storytelling lies a tension between factual accuracy and dramatic stylization. We investigate that tension by examining how narrative truth is conveyed, distorted, or enhanced through visual dramatization by focusing on the psychology of audience perception and the motivations behind creative embellishment. The practical contribution of this research is the development of two distinct digital scene setups depicting the same Honey Creek bridge collapse event. …

On The Paleontology Of Belize, Alson Ovando

Electronic Theses and Dissertations

Paleontology can be considered an underrepresented and emerging area of science in Belize. A primary aim of this thesis is to provide a background of paleontology in Belize and present the first comprehensive study of Quaternary vertebrate fossils known from the country. Quaternary fossil sites across Belize include caves, rivers, and sinkholes. In addition to reviewing and assessing material from known sites, this thesis presents new information and discoveries that were made while investigating Belize’s Quaternary fossil record. This thesis also includes a geospatial model depicting ecoregions in Belize during the last glacial maximum. Overall, the results presented here demonstrate …

Extreme Precipitation Events And Population Exposure: Site Recommendations For The Future Tennessee Mesonet, Victoria G. Redlund

Electronic Theses and Dissertations

This study examines frequency of and population exposure to extreme rainfall events in Tennessee to guide the placement of future mesonet weather stations. Using 1991-2021 daily nClimGrid precipitation records, extreme events were defined as events of rainfall ≥50 mm. These events were collated on an annual scale and normalized alongside square-root-scaled population densities derived from Landscan to develop extreme rainfall vulnerability maps. Results highlight where extreme rainfall is most frequent relative to population densities in each county. The findings were compared with models of mesonet suitability and feasibility to determine how meteorological needs correlate with siting needs such as land …

Ontogeny And The Effects Of Perinatal Stress In The First Immature Skeleton Of Teleoceras Aepysoma (Perissodactyla, Rhinocerotidae), Joe Gajewski

Electronic Theses and Dissertations

Recovery of an immature fossil rhinoceros (Teleoceras aepysoma) skeleton (ETMNH 32999) from the Gray Fossil Site in Tennessee offers the first insights into the ontogeny of the species. ETMNH 32999 is interpreted to be a subadult male in an age class equivalent to ~17-20% of potential lifespan. Comparative analyses support the hypothesis that subadults of related taxa are typically ~91% of average adult size in most dimensions. However, certain cranial dimensions are substantially lower than expected in ETMNH 32999, averaging only ~74% of the average conspecific adult. Such departure from typical growth rates is suggested to be attributable …

Low Climate Benefit Of Nordic Coastal Marshes: Site Conditions Outweigh Grazing Effects And Shape Trade-Offs Between Carbon Storage And Its Stability, Carmen Leiva-Dueñas, T. Banta, Christoffer Boström, Franziska Eller, Johan Eklöf, Line Holm Andersen, Kai Jensen, Marianna Lanari, Ella Logemann, Pere Masque, Thomas Ostertag, Christoph Reisdorff, Anaïs Richard, Anu Vehmaa, Jukka Alm, Mikael Von Numers, Dorte Krause-Jensen

Research outputs 2022 to 2026

Coastal marshes, recognized as effective organic carbon (OC) sinks, have gained attention for their potential contribution to climate mitigation through protection and restoration. However, the climate mitigation potential of Nordic coastal marshes remains understudied, likely due to their heterogeneous and often non-tidal nature. To fill this gap, we examined soil OC storage and accumulation rates, and the effects of grazing, a common management practice, across eight Nordic coastal marsh areas spanning broad climate and environmental gradients. We also assessed soil methane emissions in selected areas. The Nordic marshes studied store a median of 7 kg OC m⁻² (interquartile range, …

Degradation And Metabolic Analysis Of Synthesized Quorum-Sensing Signals By The Model Eukaryote Chlamydomonas Reinhardtii, Adam Josef Bach

Theses and Dissertations

Bacterial organisms can “talk” with one another on a colony-wide scale using a communication system known as quorum-sensing (QS) via chemical signals. These signals are produced at a basal rate throughout the life of the bacteria and are classified as autoinducers, which diffuse across the cell membrane. Once the critical concentration is reached, they begin to diffuse back into the cell and initiate a phenotypic change. As these signals exist outside the membrane of their producer, they are also accessible to other organisms. It has already been noted that some plant species uptake these compounds through their roots and break …

Moodify: A Mood-Based Music Recommendation System, Meghana Kagitha

Theses and Dissertations

Music has long been recognised as a powerful tool for emotional regulation, yet existing music streaming platforms often fail to align song recommendations with a user's current emotional state. Moodify is a mood-based music recommendation system designed to bridge this gap by delivering personalised playlists that reflect how a user feels in real time.

This project presents the design, development, and evaluation of Moodify, a mobile application that leverages the Circumplex Model of Emotion to capture user mood through an intuitive two-dimensional valence-arousal interface. Rather than relying on text input or manual search, users plot their emotional state directly onto …

Ecological Responses To Living Shoreline Restoration, Aaron S. Bland

Graduate Theses and Dissertations (2019 - present)

Coastal built communities and natural coastal ecosystems face similar and interrelated hazards: shoreline sediment erosion, shoreline retreat, and worsening storms, each of which is exacerbated by relative sea level rise. Living shorelines are coastal defense projects that incorporate natural habitats to provide more sustainable shoreline defense and improve the coastal ecosystem. Living shorelines have been widely adopted, but their performance has been highly variable, and the mechanisms of project success and failure are unclear. The overarching goal of this dissertation was to better understand the ecosystem responses to coastal restoration, focusing on the primary habitats of coastal salt marsh and …

Volume 17, Christian O’Neill, Kyara Greene, Savva Sidorov, Laura Bisaillon, Luke Clemmer, Hannah Gordon, Kitt Benson, Taylor Blount, Rachel Danzitz, Nicholas Duellman, Chase Gionis, Hima Fernando, Seth Franzyshen, Onyx Gonzalez, Bryan Lin, Samantha Start, Ysabel Wells, Maggie Duncan

Incite: The Journal of Undergraduate Scholarship

Introduction Dr. Amorette Barber, Director, Office of Student Research

From the Editor Dr. Hannah Dudley-Shotwell

Cover Artist’s Statement Maggie Duncan

On Mentoring Dr. Yulia Uryadova

Ukrainian Resistance in the Face of Russification: Nestor Makhno and Anarchism

by Christian O’Neill

Life Vest by Kyara Greene

Isolation and 16S rRNA Identification of Bacteria from Fire Department Connection Pipe by Savva Sidorov

The Effectiveness of Planned Exercise in Reducing ADHD Symptoms in Children by Laura Bisaillon & Luke Clemmer

Linguistic Analysis on Confidence and Communication Strategies with Disparities Between Sign Fluency and Hearing Impairment by Hannah Gordon

Freedmen in Indian Territory by Kitt …

Pattern Dynamics And Stochasticity Of Brain Rhythms And Spike Trains In A Tauopathy Mouse Model Of Alzheimer’S Disease, Clarissa M. Hoffman

Dissertations and Theses (Open Access)

Systems neuroscience posits that every aspect of perceived physical reality, every aspect of animal and human behavior, and every cognitive phenomenon emerges from patterns of neuronal activity. While most researchers embrace this idea, there are major difficulties in describing and analyzing these complex neuronal dynamics—spike flows produced by cells ensembles, synchronized extracellular field oscillations, and other patterns—which limits our understanding of how the activity of individual neurons and the whole-animal cognition and behavior might be connected. In particular, we lack the approaches and even the semantics for connecting the individual cell outputs and the integrated results of their activity. Current …

The Impact Of Label Material On Perceived Value And Environmental-Friendliness Of Beverages In Returnable Glass Bottles Versus Actual Environmental Impact Via Life Cycle Assessment, Toni Sharp

All Dissertations

With guidance from the EPA to reduce virgin packaging use and alternatively increase reuse, the concept of reusable packaging has re-emerged as a potential sustainable alternative to single-use and recyclable packaging. For businesses, an understanding of the potential environmental benefits of switching from single-use packaging to reusable packaging, along with consumer willingness to pay for sustainable packaging are paramount. Existing literature on willingness to pay (WTP) for ethical or sustainable products typically relies on consumers’ stated preferences found through surveys using hypothetical products and prices. It has been revealed that sustainability claims printed on the label or products in glass …

Landscape Connectivity And Wildlife Access To Water Across An International Border: Barriers And Opportunities For Facilitating Transboundary Movement, Bogdan Chivoiu, Erin L. Koen, Michael J. Osland, Christopher A. Gabler, Jerald T. Garrett, Ernesto Reyes, Stephanie A. Bilodeau, Mitch A. Sternberg, Jude A. Benavides, James Martinez

School of Earth, Environmental, & Marine Sciences Faculty Publications

Rapid global acceleration in the construction of physical barriers along international borders has greatly influenced biodiversity and animal movement. Physical barriers can fragment landscapes, hinder access to essential resources, impact long-distance migrations, and inhibit dispersal and gene flow. The effects of physical barriers on animal movement and landscape connectivity can be exacerbated in dryland environments where access to water is a limiting factor. In recent decades, the construction of border barrier infrastructure has accelerated along the international boundary between the United States and Mexico. Here, we used a landscape connectivity model to investigate the effects of barriers on wildlife access …

Isolation, Purification, And Characterization Of Α-Galactosidase From Watermelon (Citrullus Lanatus), Christopher Henley Jr.

Chemistry & Biochemistry Undergraduate Honors Theses

The enzyme α-galactosidase is a type of glycosidase that removes galactose sugar units from larger molecules in cells. Compounds that inhibit glycosidases have been useful for understanding the structure and function of the enzymes they inhibit, and some have been used to treat certain diseases. Using inhibitors of α-galactosidase to study its characteristics and mechanisms may provide insights into its role in disease and its general utility. Advances in fields such as agriculture, sustainable fuels, and biomedicine may be facilitated by inhibition studies of α-galactosidase, but the current library of known inhibitors is relatively lacking. Obtaining α-galactosidase enzymes from chemical …

Construction Impacts On Nutrient Loads In An Urban Stream In The Ozark Highlands, Matthew B. Wilson

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

Degradation of water quality is primarily caused by human activity, including urbanization. Urban stream syndrome can be characterized as a stream that has undergone physical, chemical, and biological changes as a result of urbanization, which can include an influx of nutrients that can drive unwanted plant and algae growth. It is known that construction can result in untreated nutrients entering a stream; however, it is not understood how construction affects downstream nutrient transport. The objective of this study was to understand the impacts of construction on urban water quality in Tanglewood Branch in Fayetteville, Arkansas, in the Ozark Highlands, which …

Enhancing Walleye (Ogaa) Recruitment: Evaluating Assisted Reproduction As A Mitigation Strategy, Douglass Keiser

Biology Graduate Theses

Over the past several decades, cold- and cool-water fish populations across the Upper Midwest, including Minnesota and Wisconsin, have shown troubling signs of decline. Among the most affected is the walleye/Ogaa (Sander vitreus), a species deeply embedded in the ecological balance, cultural identity, and economic vitality of the region, and central to the lifeways, treaty-reserved rights, and resource stewardship of Tribal Nations, including Ojibwe communities across the Upper Midwest. Despite ongoing stocking efforts and harvest regulations, many lake systems have experienced persistent declines in natural recruitment, prompting resource agencies to investigate the underlying causes. One such system is …

Fret Studies On The Binding Of Fibroblast Growth Factor (Fgf) Proteins To The Hard Corona Of Cuins2-Based Quantum Dots, Colette Robinson

Graduate Theses and Dissertations

Fibroblast Growth Factor (FGF) has been shown to be an important protein in angiogenesis, which is critical in developmental biology and wound healing but has also been implicated in cancer metastasis. FGF interacts with an FGF Receptor (FGFR) to signal the onset of angiogenesis but the detailed mechanism of angiogenesis, and particularly its regulation, is still largely unknown. Imaging the interaction of FGF with FGFR in biologically-relevant environments, such as directly in cells, is key towards furthering this understanding and may eventually aid in the development of better cancer treatments. CuInS2/ZnS quantum dots (QDs) are an attractive fluorescent probe to …

Grazed Pasture Effects On Greenhouse Gas Emissions In The Ozark Highlands, Tyler Buchanan

Graduate Theses and Dissertations

In the United States (US), grazinglands serve as the main foundation for the livestock industry, and, in Arkansas specifically, pastures are essential for rotational grazing and dairy operations. Climate change is increasingly becoming a concern in the agriculture industry, largely caused by anthropogenic activities increasing greenhouse gas (GHG) concentrations in the atmosphere, at least partly due to the nutrient recycling that occurs from animal manure additions in grazinglands. Therefore, quantifying GHG emissions from pastures is essential to better understanding the impacts of grazing on the environment. The objective of this study was to quantify and evaluate the potential effects of …