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Ecology And Management Of Forest Grouse: Breeding Acoustic Monitoring, Spatial Behavior, And Harvest, Logan Clark

All Graduate Theses and Dissertations, Fall 2023 to Present

Forest grouse are difficult to study and manage in the Intermountain West because they live in remote, rugged areas and do not gather at predictable display sites like other grouse species. From 2023 to 2025, I studied two species, dusky grouse (Dendragapus obscurus) and ruffed grouse (Bonasa umbellus), to test new survey tools, track their seasonal movements, and evaluate hunting impacts.

First, I tested whether small audio recording devices placed in the forest could minimize labor needed for spring breeding surveys. To do this, I conducted traditional surveys with human observers at the same time and …

Impacts Of 4r Nitrogen Management And Water Optimization On Soil Health, Kamaldeep Kamaldeep

All Graduate Theses and Dissertations, Fall 2023 to Present

Farmers in Utah and Idaho are facing growing challenges due to high fertilizer costs, limited irrigation water, and pressure to improve long-term soil health. To better understand current practices and grower attitudes, a survey was conducted in 2020 targeting 5,000 producers of small grains, corn, and potatoes. Although the response rate was low, 146 growers representing over 25,000 hectares of cropland participated. Survey results showed that most growers are open to improving nitrogen and irrigation practices and care about their soil health, even if not all are fully using 4R or precision agriculture methods.

This thesis includes two field studies …

Temperature Effects On Fruit Doubling And Bloom Prediction In Tart Cherry, Josette M. Moon

All Graduate Theses and Dissertations, Fall 2023 to Present

Tart cherry (Prunus cerasus) is a key horticultural crop in Utah. Extreme summer heat and cold weather in late spring are challenges to tart cherry production causing economic losses. These problematic weather conditions are influenced by the local landscape and are exacerbated by changing climate. This research explores (1) the impact of summer heat stress on fruit deformities, and (2) the accuracy of temperature-based predictions of spring bud development. High temperatures and water stress after harvest are known to cause a deformity known as twin or double fruits, resulting in unmarketable fruit. This disorder has been studied in …

Understanding Hydroclimate In The Contiguous United States: Roles Of Temperature Vs Precipitation And Subtropical Pacific Warming, Grace Esenam Affram

All Graduate Theses and Dissertations, Fall 2023 to Present

This study investigates the physical drivers and mechanisms of hydroclimate variability across the Contiguous United States (U.S.), using a combination of observable data, reanalysis data, land modeling, and coupled climate model experiments. One of the major findings is that the historic 2021 drought event across the Western U.S. was primarily driven by a severe lack of precipitation rather than increased temperatures. The study further finds that anthropogenic forcing has substantially increased the risk of this extreme drought by approximately 26 times relative to a world without the influence.

Additionally, the study reveals that the Pacific Meridional Mode (PMM) characterized by …

The Pharmacology Of Gpr171 Ligands In The Treatment Of Pain: An In Vitro And In Vivo Preclinical Characterization, Max V. Mcdermott

All Graduate Theses and Dissertations, Fall 2023 to Present

Opioids are addictive, ineffective for long-term treatment, readily produce withdrawal and tolerance, and can cause overdose and death. These properties have contributed to an epidemic of addiction and overdose, which continues unabated in the United States. Therefore, new drugs to treat acute and chronic pain are needed. Opioids bind to receptors belonging to a superfamily of proteins called G protein-coupled receptors (GPCRs). GPCRs are the most commonly targeted proteins among FDA-approved drugs. As such, under-researched GPCRs are a viable source of new targets in the field of drug development. One such underexplored GPCR is GPR171. Studies have demonstrated that a …

The Effect Of An Acute Bout Of Rock Climbing On Cognitive Functioning And Cortisol Levels, Vanessa Steigauf

All NMU Master's Theses

Rock climbing is an understudied physical activity (PA) that demands active decision-making, integration of sensory and visual input, and continuous regulation of nervous system activity to produce complex motor outputs. The unique psychological demands of climbing warrant studying its effect on cognition and brain health. I recruited 26 generally healthy adults for a randomized-controlled study. Climbing experience, PA and perceived stress were self-reported. Each participant was randomly assigned to a climbing (10x2 minutes climb, moderate intensity) or control group (seated, watching climbing-related video). The primary outcomes, cognitive performance and salivary cortisol levels were assessed by the Stroop test. A linear …

Integrating Uas And Satellite Data To Improve Classification Of Plant Functional Types In A Forest Landscape, Sky Mae Gennette

Boise State University Theses and Dissertations

Remotely sensed land-use/land-cover (LULC) data products are an important tool for understanding landscape processes at all scales. The types of inference researchers can derive from remote sensing data depend on the quality and characterization of these LULC products. Currently, gaps in the detail of widely available vegetation cover products limit inference about processes at the level of plant functional type (PFT). Advanced remote sensing tools, machine learning, and data fusion can be employed to contribute novel methods to produce detailed, accurate vegetation cover products. Here, we combine high resolution Unoccupied Aerial Systems (UAS) multispectral, structural and textural data with large-scale …

Changes In Co-Activation And Lower Limb Stiffness During Prolonged Load Carriage, Matthew V. Robinett

Boise State University Theses and Dissertations

Introduction: Overuse musculoskeletal injuries are a common, costly challenge for the armed services. A stiffer lower limb during routine prolonged load carriage tasks may be necessary to attenuate elevated ground reaction forces but further increases musculoskeletal overuse injury risk. Quantifying leg and joint stiffness provides comprehensive and joint level insight into the attenuation of ground reaction forces, and subsequent injury risk. But, it is currently unknown how prolonged load carriage affects leg, knee and ankle stiffness, and knee and ankle muscular activation. Purpose: This study sought to quantify leg, knee, and ankle stiffness, and the activation and coordination of associated …

How Plant-Soil Feedbacks At Varying Levels Of Plant Species Diversity Influences The Reestablishment And Performance Of Native Sagebrush Steppe Species, Sierra Santosuosso

Boise State University Theses and Dissertations

Increased frequency of wildfire has become a significant problem in the sagebrush steppe, altering soil biogeochemical properties that promote the establishment of invasives at the expense of native species. To reduce annual grass invasion, restoration efforts often include seeding with non-native bunch grasses such as Agropyron cristatum (L.) Gaertn (crested wheatgrass [AGCR]) that outcompete cheatgrass; however, this strategy does not lead to the return of a native sagebrush steppe ecosystem. Restoring ecosystems to higher levels of native species diversity may reduce invasion and promote sustained success of restoration efforts since biodiversity can improve ecosystem functioning and promote resilience. In 2019 …

Farmers’ Perceptions About Drivers Of Poverty: A Case Study Of Cocoa Farmers In Ghana, Felix Agyei Boamah

Graduate Theses and Dissertations

Cocoa farmers in Ghana face numerous challenges that undermine their incomes and living standards, including high labor costs, fluctuating cocoa prices, high cost and limited access to inputs, lack of credit, illegal mining, weather risks, small farm sizes, outdated farming and drying technologies, and inadequate extension services. These issues reduce productivity, lower incomes, and perpetuate poverty. This study examined farmers’ perceptions about the importance of these challenges and assessed possible differences across regions and farm households’ socioeconomic status. In the summer of 2024, data were collected from 400 cocoa farmers in major cocoa-producing areas of Ghana’s Eastern and Ashanti regions. …

Pediatric Occupational Therapists’ Perception On How Nature-Based Play Affects Fine Motor Development, Abbi M. Rosenow

Human Development and Family Sciences Undergraduate Honors Theses

This study aimed to explore the benefits of nature-based pediatric occupational therapy and the influence of nature and nature-based play on fine motor development. It was hypothesized that nature and nature-based play would positively impact a child’s fine motor skills, and that nature-based occupational therapy would offer unique benefits to a child’s therapeutic experience. To examine these relationships, a survey was distributed to pediatric occupational therapists across the United States. The survey was designed to gather insights into how occupational therapy supports fine motor development, how nature-based play/therapy enhances these skills, and the perceived benefits of incorporating nature into therapeutic …

Exploring Variability Of The Cg18562578 Methylquant Assay For The Forensic Discrimination Of Monozygotic Twins, Sydney E. Arnold

Student Theses

Monozygotic (MZ) twins possess identical DNA sequences, posing a problem for forensic scientists, as they are incapable of distinguishing MZ twins from each other using traditional DNA identification methods. However, the epigenomes of MZ twins will differ and might be used for their forensic discrimination. Here, we explored the variability of an assay previously developed by our laboratory that showed high discrimination potential for MZ twins using buccal swab DNA, cg18562578 MethylQuant. We measured precision at each step: bisulfite conversion, nested PCR, and qPCR, reproducibility, and repeatability. DNA methylation ratios were compared between two analysts carrying each step using the …

Advancing Fishery Dependent And Independent Habitat Assessments Using Automated Image Analysis: A Fisheries Management Agency Case Study, Scott Evans, Bronson Philippa, Carlo Mattone, Nick Konzewitsch, Renae Hovey, Marcus Sheaves, Gary A. Kendrick, Lynda M. Bellchambers

Fisheries Research Articles

Advances in artificial intelligence and machine learning have revolutionised data analysis, including in the field of marine and fisheries sciences. However, many fisheries agencies manage sensitive or proprietary data that cannot be shared externally, which can limit the adoption of externally hosted artificial intelligence platforms. In this study, we develop and evaluate two residual network-based automatic image annotation models to process fishery specific habitat data to support ecosystem-based fisheries management in the Exmouth Gulf Prawn Managed Fishery in Western Australia. Using an extensive dataset of 13,128 manually annotated benthic habitat images, we train a grid-based annotation model and an image-level …

Assessment Of Floral Resources From Three Tamaulipan Thornscrub Communities Of The Lower Rio Grande Valley, Gracie Makenna Granados

Theses and Dissertations

The Tamaulipan thornscrub is a transition zone between the neotropics and the temperate regions, harboring high biodiversity. This habitat supports a diverse insect community, including many pollinators of native and cultivated plants in Texas and northeastern Mexico. This ecosystem has been extensively degraded and lost; only 5% of its original cover remains north of the Rio Grande. Restoration of the Tamaulipan thornscrub has been ongoing for over three decades, but the important roles of pollinators in the success of such efforts and the functioning of the restored ecosystem have rarely been considered in restoration efforts. The purpose of this study …

Arginine Vasotocin And Corticosterone In Nesting And Non-Nesting Loggerhead Sea Turtles In X’Cacel-X’Cacelito Sanctuary, Krista Blair Reed

Theses and Dissertations

Sea turtles exhibit distinct behaviors before and after egg laying, however, not all individuals successfully oviposit. Some females display disruptions in their typical nesting behavior, returning to the water without laying eggs, which is referred to as a non-nesting emergence (NNE). NNEs can be due to external disturbances on the beach, but why they occur is often unclear. Arginine vasotocin (AVT) is a neuropeptide involved in various physiological processes, including stimulating smooth muscle contraction of the oviduct to facilitate egg deposition in nesting sea turtles. On the other hand, corticosterone is the primary stress hormone in sea turtles and is …

Computational And Experimental Analysis Of Knee Kinematics And Gait Variability: The Effects Of Load, Speed, And Fatigue On Human Motion, Alfirio Trejo Jr.

Theses and Dissertations

This thesis investigates the biomechanical behavior of the human knee under varying conditions of motion, load, and fatigue, with a focus on clinical angle analysis and gait stability. Four studies were conducted using motion capture data and a modified Grood and Suntay Joint Coordinate System (JCS) to evaluate knee joint kinematics—specifically flexion-extension, abduction-adduction, and internal-external rotation. The first study examined the effects of incremental weight loads during isolated knee extension exercises, revealing dose-dependent increases in abduction and internal rotation that may contribute to joint stress. The second study assessed the impact of walking speed and asymmetric loading on gait, showing …

Exploring Transcriptional Stress Responses In Sorghum And Evolutionary Insights Into Yth Domain Proteins Across Plants, Shikha Bharti

Theses and Dissertations

Understanding how plants respond to abiotic stress is crucial for enhancing crop resilience in the face of climate change. This thesis explores plant stress adaptation mechanisms through two interlinked studies that address different aspects of gene regulation. The first study investigates the transcriptional dynamics of Sorghum bicolor under drought and heat stress at 1-hour and 6-hour time points. By employing 3'-end RNA sequencing, this study provides a comprehensive temporal view of gene expression changes, revealing stress-responsive transcription factors, hormone-associated pathways, and chromatin regulators. The comparative analysis highlights both common and distinct molecular responses between drought and heat stress, providing insights …

Biological, Histological, And Immunohistochemical Responses To Heat Stress In Common Goldfish, Carassius Auratus, Ngozichukwu Francis Ngozichukwu

Theses and Dissertations

Global climate change has led to rising temperatures, posing significant challenges to aquatic ecosystems and the health of ectothermic species such as goldfish (Carassius auratus) This thesis investigated the effects of heat stress on growth performance, histological alterations, and molecular stress responses in the gill and kidney tissues of goldfish Fish were exposed to control (24°C), medium (28°C), and high (32°C) temperatures for two weeks Growth parameters, including instantaneous growth rate (IGR), absolute growth rate (AGR), body value gain (BVG), and condition factor, were evaluated alongside histological and immunohistochemical markers of stress Results revealed that high temperature significantly reduced AGR …

Opa1-Mediated Mitochondrial Dynamics In Myogenic Differentiation Of C2c12 Myoblasts, Daniel Eloy Bazan

Theses and Dissertations

Mitochondria play a pivotal role in metabolic energy production, cellular signaling, and apoptosis. To carry out these key cellular roles, mitochondria dynamically balance their organization through opposing including fusion and fission processes. The balance between mitochondrial fusion and fission is regulated by key proteins such as OPA1 (optic atrophy 1) and OMA1 (overlapping activity with metalloprotease). More recently, mitochondria have been increasingly revealed to play key roles in cellular differentiation, where metabolic demands are reprogrammed. This study aims to elucidate the specific roles of OPA1 and OMA1 in the differentiation of C2C12 myoblast cells into myotubes.

Our data demonstrates that …

Phenotypic Plasticity In Response To Abiotic Factors In Silverleaf Nightshade (Solanum Elaeagnifolium), And The Effectiveness Of North American Lacebug (Gargaphia Arizonica Drake And Calvo) As A Biocontrol, Marco Andre Silguero

Theses and Dissertations

Silverleaf nightshade (Solanum elaeagnifolium) is a widespread invasive weed in South Texas and other arid regions, where it reduces crop productivity, competes with native vegetation, and resists conventional control methods. Its ability to thrive across different environments is linked to phenotypic plasticity, allowing it to adjust growth and physiology in response to light and water availability. In this thesis, I examine the role of plasticity in S. elaeagnifolium under field conditions and evaluate the potential of the North American lacebug (Gargaphia arizonica) as a biological control agent. Field observations were used to measure plant traits such as height, stem thickness, …

Gut Passage Time In Small Mammals: Influences Of Small Mammal Traits, Digesta Phase, And Particle Morphology, Noah G. Hale

Electronic Theses and Dissertations

Dispersal is crucial in maintaining healthy ecosystems, but little is known about mechanisms influencing fungal spore dispersal by animals. We aimed to develop a more mechanistic understanding of the influence of fungal spore traits and small mammal traits on gut retention time. We fed three species of small mammals (shrew, mouse, vole), which differ in gut morphologies, digestive strategies, and activity a combination of markers including: liquid digesta phase (CrEDTA), small particle (fungal spores with diverse morphologies), and large particles (glitter and beads, representing plant cells and seeds, respectively). We found that hindgut fermenters selectively retained the liquid markers, spores …

2024 Soybean Insect Losses In The United States, Fred R. Musser, Sebe A. Brown, Tim Bryant, Whitney D. Crow, Jeffrey A. Davis, Christina Difonzo, Chase Floyd, Scott H. Graham, Jeremy K. Greene, Kelly A. Hamby, David Kerns, Janet Knodel, David Owens, Dominic D. Reisig, Phillip M. Roberts, Nicholas J. Seiter, Adam J. Sisson, Benjamin C. Thrash, Kelley J. Tilmon, Raul T. Villanueva

Midsouth Entomologist

Estimated management costs and losses due to insects and other invertebrates in soybean during the 2024 growing season were collected and compiled from 19 states to provide a record of insect pressure and management practices for the year. These annual estimates provide a historical record of pest pressure and insect management and have been compiled in some states since 2004. Participating states represented 63% of soybean acreage grown in the United States, with near 100% participation in southern states. Overall, the stink bug complex was the costliest insect pest in soybean followed by corn earworm and soybean looper. Total insect …

Using The Dash Diet To Create Hypertensive-Friendly Dishes For People Of Chinese Heritage, Kady Li

Electronic Theses, Projects, and Dissertations

Cardiovascular disease is the leading cause of death worldwide, associated with high sodium intake being a primary contributor to elevated blood pressure. The US Dietary Guidelines for sodium intake is 2,300 mg per day; however, studies indicate that the average daily sodium consumption among Chinese adults is 5,013 mg. The Dietary Approaches to Stop Hypertension (DASH) diet is often recommended to those diagnosed with hypertension. This project aims to develop a cookbook featuring lower-sodium Chinese recipes following the DASH diet guidelines. Twenty-five traditional Chinese recipes were modified to align with DASH diet guidelines (25% reduction in sodium content). Nutrient analysis …

Mixture Effects On Metal Accumulation In The Asian Clam, Corbicula Fluminea, Mark A. Huff

Electronic Theses and Dissertations

Field collected Corbicula fluminea were exposed to trace level copper, lead, and zinc with the aim of examining the preferential accumulation between the soft tissue and shell. Metal levels were based on those in a permitted industrial effluent. At 1X effluent and 2X effluent exposure levels, copper was found to preferentially accumulate in the clam soft tissue, lead was found to preferentially accumulate in the clam shell, and zinc was found to excrete back into the diluent after preferentially accumulating in the clam soft tissue. When exposed as a mixture at 1X effluent levels, copper and lead were found to …

Commodity Diversification, Technological Innovation, And Market Dynamics: Insights Into Beef Cattle Production And Feeder Cattle Basis In The United States, Nik Berg

All Theses

The beef cattle industry plays an important role in the agricultural economy, contributing to both domestic food supply and global trade. The United States is one of the world's largest producers of beef, with production systems varying widely across regions largely due to differences in available resources and market structures. Market conditions, technological advancements, and policy interventions shape the way producers operate, making research into these factors essential for both industry stakeholders and policymakers.

Producers are continuously adapting to changing economic conditions, environmental challenges, and evolving consumer preferences. By analyzing these factors, researchers can provide insights to support informed decision-making …

Post-Harvest Storage Of Fuzzy Cottonseed: Quality, Airflow Modeling, And Energy Use, Elijah T. Porter

All Theses

Fuzzy cottonseed is a valuable byproduct of the cotton ginning process. When cottonseed exits the cotton gin, it often retains high temperatures and moisture contents. Once in a storage facility, the cottonseed needs to be conditioned for safe storage. The overall objectives of this study were to analyze quality changes in cottonseed according to storage conditions, determine the airflow resistance properties of fuzzy cottonseed, develop a computational fluid dynamics (CFD) model of a representative cottonseed storage facility, and analyze cottonseed aeration fan strategies, runtimes, and costs. Changes in quality dictate the allowable storage time for cottonseed and are impacted by …

Life Cycle Assessment Of The Cultivation Of Lettuce In A Hydroponic System Using The Nutrient Film Technique, Raquel Jordan

All Theses

Hydroponic systems are an emerging method of soilless crop cultivation typically done inside a greenhouse where nutrients are delivered dissolved in water rather than being supplied from the soil. Potential benefits of hydroponic systems include reduced irrigation requirements, higher crop yield per area, and the ability to grow crops year-round in nontraditional areas such as urban settings, cold climates, and sites with contaminated soil. However, hydroponic systems tend to have high energy requirements for lighting and climate control, which can yield significant environmental impacts. To explore the environmental impacts of cultivating lettuce in a nutrient film technique (NFT) hydroponic system, …

The Effects Of Incremental Application Of Chemical Defoliants On Cotton Fiber Quality, Aashish Karki

All Theses

Leaf shedding is a natural process as cotton matures; however, this does not synchronize with harvest timing; therefore, defoliants are used to remove these leaves and improve harvestability of the bolls. A tractor-mounted boom sprayer is typically used to apply defoliants. However, this approach results in low penetration to the bottom canopy, poor defoliation, and, consequently, lower fiber quality. An autonomous robotic spraying system equipped with pulse width modulation technology enables targeted side-spraying of defoliants, overcoming the limitations of conventional over-the-top applications. However, limited information on staggered defoliation timing and its effect on cotton fiber quality is available. Thus, field …

Association Between Gene Family Expansion And The Rapid Diversification Of Pleurocarpous Mosses, Meredith A. Cobb

All Theses

Mosses are the second most species-rich group of land plants. They represent a critical group for understanding the evolution and diversity of land plants. Mosses comprise two major groups, acrocarps and pleurocarps. Despite having a more recent evolutionary origin than acrocarps, pleurocarps are exceptionally diverse. The difference in species richness reflects a rapid species diversification, roughly coincident with the origin and diversification of flowering plants. The speciation events giving rise to pleurocarp diversity happened so rapidly, making it historically difficult to produce strongly supported phylogenies with which to test evolutionary hypotheses. One such hypothesis is whether large-scale changes at the …

Small Stream Restoration In The Piedmont Of South Carolina: Comparison Of Evaluation Tools And Water Quality’S Effects On Salamanders, Camryn Lachica

All Theses

For many years, the United States Army Corps of Engineers (USACE) used the Guidelines for Preparing a Compensatory Mitigation Plan worksheets to guide pre-restoration evaluation and determine post-restoration mitigation credits in South Carolina. Recently, the USACE in South Carolina transitioned to the Stream Quantification Tool (SQT), which provides a more comprehensive assessment framework. Our first objective was to compare these assessment methodologies across different landscape types to determine what the SQT adds to mitigation calculations that were not considered in prior worksheets. We evaluated 16 streams in the Piedmont of South Carolina, with four replicates each of forested, suburban, urban, …