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The Effects Of Heat Stress On White Blood Cell Profiles And Antibody Concentrations In Broilers Genetically Selected For Low Water Conversion Ratio Compared To The Modern Random Bred Broiler, Luke B. Janski

Poultry Science Undergraduate Honors Theses

Heat stress (HS) is one of the most significant environmental stressors impacting poultry production worldwide, reducing growth, feed efficiency, welfare, and immune competence. With global temperatures rising, understanding physiological and immunological adaptations to HS is essential for sustainable production. Broiler chickens selectively bred for low water conversion ratio (LWCR) have shown potential for reduced water consumption under environmental challenges; however, their immune resilience under HS conditions compared with modern random-bred (MRB) broilers remains unclear. This study investigated the effects of cyclic HS on red- (RBC) and white- (WBC) blood cells and humoral immunity in LWCR and MRB broilers. Birds were …

Environmental Enrichment Preferences And Play Behavior In Commercial Turkey Hens, Paul Dang

Poultry Science Undergraduate Honors Theses

Commercial turkey production contributes significantly to the U.S. agricultural industry, yet studies on positive welfare indicators, especially play behavior, are limited. This study evaluated turkey hen interactions with two environmental enrichments (straw bales and pecking stones hung from the ceiling) and the expression of play behavior in turkey barns. Three commercial turkey hen barns were equipped with environmental enrichments and time-lapse video cameras. Play behaviors were recorded during transect walks in two barns using 30-second scans of disturbed and undisturbed patches. Regional use of space around enrichments was quantified through region-of-interest (ROI) analysis of time-lapse images collected from days 16-31 …

Transcriptomic Responses Of Teleost Fishes To Thermal And Environmental Stress: A Synthesis Of Rna-Seq Studies, Aleen Ammar

Theses, Dissertations and Culminating Projects

Climate change is driving rapid shifts in aquatic ecosystems, increasing the frequency and intensity of environmental stressors that affect survival, species distributions, and productivity. Alongside increases in temperature, stressors, such as hypoxia and acidification, are also intensifying with climate change. Teleost fishes exhibit substantial variation in tolerance to such environmental stressors. These range from specialists with narrow limits to generalists capable of persisting across fluctuating conditions, complicating predictions of vulnerability under ongoing environmental change. Transcriptomic approaches, particularly RNA sequencing (RNA-seq), provide a powerful approach for linking environmental stressors to physiological responses by quantifying genome-wide changes in gene expression. To assess …

Phenological Shifts In Reproductive Timing Of Bay Scallops (Argopecten Irradians) In New Jersey Following Subspecies Replacement, Ross John Choate Jr.

Theses, Dissertations and Culminating Projects

Bay scallops (Argopecten irradians) are commercially, ecologically, and recreationally important bivalves that have undergone major shifts in New Jersey over the past 25 years, including the extirpation of the southern subspecies from New Jersey in 2001 and its replacement by the northern subspecies from Long Island by 2004. This transition altered reproductive timing, reflected in changes to the Gonadal–Somatic Index (GSI) as well as the timing of visual gonadal conditions exhibited during specific months. Early post-reestablishment data showed peak GSI in June and July, consistent with Long Island populations, but recent observations indicate a shift toward August and September peaks, …

Assessing Decadal Changes In Eelgrass Communities From Barnegat Bay, Nj, Janelle Marie Delcastillo

Theses, Dissertations and Culminating Projects

Zostera marina (eelgrass) is a widely distributed marine angiosperm across northern hemisphere coastlines, yet many regions have experienced substantial declines due to disease, coastal development, and other anthropogenic stressors. Barnegat Bay is the only estuary in New Jersey that still supports extensive eelgrass beds, although it has undergone notable losses over the past five decades. To evaluate decadal-scale ecological change, we collected sediment cores in 2025 from a site with historical data spanning 2001–2010. Overall faunal densities remained relatively consistent, but several taxa exhibited clear shifts in abundance. Amphipods in the Phoxocephalidae and the isopod Erichsonella increased, whereas the cold-affinity …

Odor Vs. Direction Prioritization In Shelter Navigation By The Whip Spider Phrynus Marginemaculatus, Aiden Barno, Daniel D. Wiegmann, Verner Peter Bingman, Sidney Tyler Ley

Honors Projects

Arthropod navigation is known to rely on a variety of multisensory strategies, yet the prioritization of these cues in whip spiders remains poorly understood. This study examined whether Phrynus marginemaculatus prioritizes olfactory cues or idioethic directional cues when the two cues directly conflict with one another. Twelve subjects were trained to associate a shelter with both a specific odor (geraniol or 1‑hexanol) and a consistent directional movement (left or right) from the release site. In a subsequent test trial, odor and direction were dissociated, and subjects’ time spent in front of each shelter was used to determine an association index …

Evaluation Of Flt3 Inhibition With Quizartinib During Busulfan Conditioning For Hematopoietic Stem Cell Transplantation, Catherine Jankovic

Biochemistry and Molecular Biology

Hematopoietic stem cell transplantation (HSCT) is one of the only curative therapy options for many hematologic malignancies. HSCT relies on effective conditioning regimens to deplete host hematopoietic cells and enable donor engraftment. The alkylating agent Busulfan is widely used in myeloablative conditioning strategies due to its potent cytotoxic effects on hematopoietic cells and ability to clear the bone marrow. However, optimization of conditioning strategies remains an important area of investigation to improve transplant outcomes and reduce toxicity. Preliminary studies have shown that the FLT3 inhibitor Quizartinib synergizes with some chemotherapeutic agents, suggesting that targeted inhibitors may enhance conventional conditioning regimens. …

Beat Behind The Bark: Investigating The Effects Of Music Tempo On Canine Physiological And Psychological States, Marley Lanier

Honors Theses

This study explores how the tempo of music, measured in beats per minute (BPM), affects dogs' heart rate and oxytocin levels, adding to past research that shows that music affects physiological and behavioral states in dogs. Being able to understand these effects holds practical implications for improving overall well-being in canines in environments such as homes, shelters, and clinical environments. Using a within-subjects design, the dogs were exposed to slow and fast versions of one instrumental track, along with a white noise baseline condition before each randomized condition. Heart rate was recorded continuously throughout the session, and oxytocin saliva samples …

Bottles, Butterflies, And Biomass: Recycled Glass Sand, Microbial Additions, And Herbivory Effects On Milkweed Growth, Kealey Skinner

Honors Theses

Plant-soil-microbe interactions are integral components of ecological networks and drive ecosystem function from the bottom-up. Whereas herbivores regulate ecosystem function from the top-down, having opposing and potentially complementary effects on ecosystem function. My thesis sought to understand how below-ground microbial communities contribute to herbivore preference and plant biomass across varied soil substrates. My thesis asked: how do substrate and soil microbial communities influence herbivore preference and plant biomass accumulation on swamp milkweed (Asclepias incarnata)? To address this question, seedlings of A. incarnata were sown in 2.5 cm wide × 10 cm deep pots filled with either natural beach sand or …

Production Of Hydrolyzed Lactose Syrup From The Acid Whey, Aubrey Jean Arbon

All Graduate Theses and Dissertations, Fall 2023 to Present

Acid whey has gained significant attention within the dairy industry due to its complex matrix and the processing challenges. This by-product contains lactose that can be isolated, hydrolyzed, and further processed to produce hydrolyzed syrup. To optimize lactose utilization, it is essential to fine-tune the kinetics of the β-galactosidase enzymes used for lactose hydrolysis. To analyze sugars in acid whey, and LC-MS-based chromatographic method was developed. Once the method was developed, the kinetics of β-galactosidase were optimized with respect to enzyme concentration, pH, and temperature. The goal was to achieve the highest possible lactose hydrolysis. The hydrolyzed acid whey was …

The Effect Of Including A Yeast Culture Containing Essential Oils In Receiving Cattle Diets On Growth Performance And Health, Taylor D. Foster, Robin A. Cheek, Elizabeth B. Kegley, Jana L. Reynolds, Alexis J. Harness, Craig M. Looney, Jeremy G. Powell

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Due to the increased risk of bacterial resistance to antibiotics and the endemic incidence of bovine respiratory disease (BRD) among growing and finishing cattle, alternative strategies must be developed to improve the health of cattle. The objective of this study was to evaluate the use of a supplement containing a yeast culture and an essential oils blend (YEO) on the health and growth performance of stocker calves at high risk for BRD. Crossbred male beef calves (n = 185) received on two separate dates were used in a 42-d study. Within each truckload, calves were stratified by body weight and …

Herbivory Of Phragmites Australis Along A Salinity Gradient In Connecticut Wetlands, Sydney H. Kolz

Honors Scholar Theses

Invasive Phragmites australis (common reed) is widely distributed in New England wetlands, where it often outcompetes native plants and decreases biodiversity throughout the food web. Controlling its invasion is a priority, especially in salt marsh habitat, but current management techniques are inefficient. Leveraging natural processes may improve control strategies, but in order to do so, we must first better understand how abiotic and biotic stressors interact and affect Phragmites. This study focuses on herbivory and salinity, two factors limiting Phragmites’ fitness. I measured soil salinity and quantified the damage of three herbivore guilds (i.e. gall-formers and stem-borers, leaf-chewers, and …

Are Sticky Prices Present In Us Ag Land Lease Rates, John Tyler Blazzard

Graduate Theses and Dissertations

Land is an essential resource in production agriculture. Limited supply and high demand for land have resulted in increasing land values which are a barrier to entry for beginning farmers and ranchers with limited access to capital and credit. One way to overcome the high costs of purchasing land is to lease it. While more affordable than purchasing land, cash rents are also increasing. The objective of this research is to determine whether agricultural cash rents follow farm income symmetrically over time. This is accomplished by implementing Ordinary Least Squares (OLS) regressions with two-way fixed effects which account for rental …

Geospatial Science And The Changing Environment: Applied Methods For Sustainable Agriculture And Landscape Management, Harrison Wakefield Smith

Graduate Theses and Dissertations

Rapid environmental change is disrupting agricultural productivity, ecological function, and the long-term resilience of managed landscapes. At the same time, the rapid growth of geospatial data science has improved our understanding of environmental change and increasingly is being used to improve sustainability in agricultural and environmental management. However, critical gaps remain that limit the applicability of data-driven insights in landscape management. This dissertation investigates the potential of geospatial analytics for sustainable agriculture and landscape management, with a focus on applied methods that operate across spatial and temporal scales. Using field, landscape, regional, and national datasets, it explores the capabilities and …

Genome-Wide Phenotypic Characterization Of Mycobacteriophage Mercurio, Tyler Downs

Departmental Honors & Graduate Capstone Projects

Bacteriophages, or phages, are being piloted as a supplemental or alternative therapeutic to antibiotics against drug-resistant Mycobacterium pathogens, such as M. tuberculosis, which pose a global public health crisis.  Characterizing bacteriophage genomes can provide insights into efficacy in phage therapy before implementation or elucidate new targets to manipulate bacterial growth.  Overexpression of individual phage genes is useful to study a gene product’s function independent of others.  Here, the results of phage Mercurio plasmid library overexpression in plate-based assays are described.  Mercurio infects nonpathogenic Mycobacterium smegmatis and is genetically related to bacteriophages infecting pathogenic Mycobacterium species.  Eleven gene products of …

Aggregation And Collation Of Texas Crayfish Museum Specimens To Determine Their Current Conservation Statuses, Adrian Alvarez

Biology Theses

Crayfish account for over half of the macroinvertebrate biomass in many ecosystems and serve as crucial bioindicators because of their behavioral and physiological adaptability to environmental changes. Despite being home to approximately 52 native crayfish species, Texas currently lacks protective regulations. This gap is primarily because of insufficient information regarding their distribution and occurrences within the state, including their statuses as Species of Greatest Conservation Need (SGCN). This study focuses on compiling and comparing crayfish museum records with current iNaturalist field survey data across Texas to address these knowledge gaps and recommend updates to SGCN statuses. Five species not currently …

Quantitative Genetics, Genomics, And Phenomics In Maize And Sorghum, Nikee Shrestha

Complex Biosystems Program: Dissertations and Student Research

Generating the best crop varieties and hybrids requires identifying genes associated with the phenotype of interest and screening thousands of varieties across multiple locations. Quantitative genetics, along with comparative genomics, phenomics, and machine learning approaches, can help us identify target genes associated with the phenotype of interest to develop the right genotypes. Satellite platforms offer logistical and technical advantages in scalability and accessibility and could facilitate plot-level predictions, especially with steadily improving spatial resolution, thereby empowering the large-scale screening of thousands of genotypes across diverse locations. In the first chapter, I evaluated over 20,000 plot-level images of over 80 hybrid …

The Effect Of Including A Yeast Culture Containing Essential Oils In Receiving Cattle Diets On Growth Performance And Health, Taylor Deanna Foster

Animal Science Undergraduate Honors Theses

Due to the increased risk of bacterial populations developing resistance to current antibiotics, consumer perceptions surrounding the utilization of antibiotics use in cattle, and the endemic incidence of bovine respiratory disease (BRD) among growing and finishing cattle, alternative management strategies to improve the health of cattle must be developed. The objective of this study was to evaluate the use of a supplement containing a yeast culture and an essential oils blend (YEO) on the health and growth performance of stocker calves at high-risk for BRD. Crossbred male beef calves (n = 185) received on two separate dates were used in …

Influence Of Increased Supplementation Of Organic-Complexed Zinc To Beef Cows During Gestation: Effects On Preweaning Health Of Offspring, Naija N. Sharpley

Animal Science Undergraduate Honors Theses

The objective of this study was to determine the effect of increasing zinc supplementation from organic-complexed sources to beef cows during gestation on calf performance. In May 2025, during gestation, Angus crossbred cows were confirmed pregnant with female sexed semen (n = 83) and enrolled in the current study. Cows (4.7 ± 2 years of age and 531 ± 84.4 kg body weight, mean ± standard deviation) were allotted to 4 groups (20 to 21 cows/group) based on, sire of heifer calf, cow age, and cow body weights taken at weaning. Assigned groups received 1 of 2 treatments (2 groups/treatment): …

Using A Toxic Aging Coin To Assess Hexavalent Chromium Neurotoxicity: Impact Of Cr(Vi) On The Blood-Brain Barrier, Liam Buchanan

College of Arts & Sciences Senior Theses

The US population faces simultaneous public health threats from both aging and environmental pollutants. Chief among these is hexavalent chromium [Cr(VI)], whose toxic effects in peripheral tissues are well-established but its effects on the brain are still understudied. Following previous results indicating hippocampal metals dyshomeostasis after Cr(VI) exposure, we aim to assess Cr(VI)’s impact on the blood-brain barrier (BBB), a key structure for brain protection. We exposed young, middle-aged, and geriatric rats of both sexes to low levels of Cr(VI) in their drinking water for 90 days, after which we used immunofluorescence and confocal microscopy to analyze tissues for evidence …

Cholesterol Effect On The P-Glycoprotein Conformational Dynamics, Zane Bunn

Biological Sciences Undergraduate Honors Theses

P-Glycoprotein (Pgp) is a human efflux pump that belongs to the ABC transporter family. This protein consists of two transmembrane domains (TMD) that convert between inward to outward facing configurations to remove a wide variety of structurally different compounds from the intracellular membrane into the extracellular space using ATP.  This non-specific efflux of compounds has brought Pgp to scientific light as having a major role in multi-drug resistance of many diseases, and researchers are focused on developing a deeper understanding of the protein. To further this understanding, this study analyzed how the structure of Pgp is affected by a 10% …

The Effects Of Impervious Land Cover And Red Tide (Karenia Brevis) On The Florida Manatee (Trichechus Manatus Latirostris) In The Gulf Coast Of Florida, Anna Compton

Honors College Theses

Red tide, caused by the dinoflagellate Karenia brevis, is an algal bloom event that occurs annually in the West Florida Continental Shelf. The algae releases brevetoxin, a toxin that can be fatal to wildlife in high concentrations. These algal bloom events are thought to be exacerbated by warming ocean temperatures and increased nutrient runoff from urbanization. Red tide is responsible for the mass mortality of various marine organisms like the Florida manatee (Trichechus manatus latirostris). This study analyzes the changes in nutrient runoff and sea surface temperatures, and how these factors affected red tide cell concentrations and Florida manatee mortalities …

Effects Of Weight Loss Medications In Combination With Psychotropic Medications, Emily A. Hoffman

Electronic Theses, Projects, and Dissertations

Background and aims: The obesity epidemic has been well-documented and weight loss medications are becoming increasingly popular. Patients with psychiatric conditions often suffer metabolic side effects from psychotropic medications and are often prescribed weight loss medications to mitigate these side effects. When treating patients on these medications concurrently, understanding their potential side effects is essential for developing an effective care plan. Registered dietitian nutritionists (RDNs), pharmacists, and mental health professionals working in mental health facilities should be aware of these potential side effects to better care for their patients.

Methods: After completing a thorough literature review, a handbook …

Tips For Health Care Practitioners: A Guide For Adolescent Obesity, Regina Santana

Electronic Theses, Projects, and Dissertations

Adolescent obesity continues to be a significant public health concern that is associated with long term physical consequences. The purpose of this project was to develop an evidence based, user friendly guidebook that supports healthcare professionals in the education of adolescents with obesity and their families. A structured literature review development process was used to inform the current development of the guidebook. The guidebook includes components of obesity management such as nutrition and physical activity recommendations. The validity of the content was established through the evaluation of five healthcare professionals that include registered dietitians and licensed therapists. The guidebook was …

Developing Warning Signage For Harmful Algal Blooms At Lake Fayetteville, Abigail R. Evans

Biological Sciences Undergraduate Honors Theses

The presence of harmful algal blooms (HABs) poses many risk factors for human health, and once microcystin concentration has reached a certain level, that water source will be closed for the duration of the bloom. Agencies tend to use static signage with limited information to inform the public about the current status of the water, but a sign similar to the one used by the National Fire Danger Rating System can allow for constant updates detailing specific risk levels for the public. Using previously reported data on Lake Fayetteville, thresholds for risk factors that are easily measurable were determined. The …

The Genetic Basis Of High Transformation Efficiency In The Model Yeast Saccharomyces Cerevisiae, Mary Kathryn E. Cheek

Biological Sciences Undergraduate Honors Theses

Transformation, a type of horizontal gene transfer, describes the uptake, maintenance, and integration of environmental DNA by cells. Despite the known effects of transformation on evolutionary processes, little is known about the genetic basis of this phenomenon. Saccharomyces cerevisiae is a eukaryote able to transform at quantifiable rates when made chemically competent and treated with a heat shock. S. cerevisiae also has variation in transformation efficiencies between various strains, and high recombination rates allow for sufficient allele “shuffling” in intercross populations. This project utilizes a bulk segregant analysis approach to compare sequencing data between transformant pools and non-transformant pools of …

Exploring Exercise Motivation And Mental Well-Being In College Students, Elaine M. Lindesmith, Anqi Deng Dr

Health, Human Performance and Recreation Undergraduate Honors Theses

This study examined the relationship between physical activity, exercise motivation, and mental well-being among 48 undergraduate students at the University of Arkansas. Guided by Self-Determination Theory, the study used survey data to measure depression, anxiety, physical activity, and open-ended exercise motivation responses. Motivation responses were coded as autonomous or controlled.

Results showed that physical activity was weakly and negatively related to depression and anxiety, but these relationships were not statistically significant. There were also no significant differences in mental health between autonomous and controlled motivation groups, and motivation did not significantly predict mental health outcomes in regression analyses. Overall, the …

Dried Water Treatment Residuals Might Be An Option To Reduce Soluble Reactive Phosphorus Release From Soils, Katie B. Mckay

Biological and Agricultural Engineering Undergraduate Honors Theses

Nonpoint source pollution from agricultural landscapes contributes to freshwater eutrophication, with legacy phosphorus (P) in soils potentially driving soluble reactive phosphorus (SRP) losses to surface waters. The objectives of this study were to evaluate SRP adsorption by dried water treatment residuals (WTRs) produced by Beaver Water District, quantify reductions in soil SRP release across increasing WTR application rates, and compare dried WTR performance to prior WTR studies.

Dried WTRs (~98% solids) were assessed using batch sorption experiments and soil core incubations. Phosphorus sorption was measured by mixing WTRs with CaCl₂ solutions containing increasing SRP concentrations and fitting results to …

Cross-Facility Reliable Deep Learning Based Beef Marbling Assessment Via Unsupervised Domain Adaptation Regression, Samuel Vinson

Biological and Agricultural Engineering Undergraduate Honors Theses

Inconsistent quality grading in beef production leads to inefficiencies, economic disparity, and consumer mistrust. While USDA meat grading traditionally relies on skilled visual inspectors, these human evaluations suffer from cross-facility variability and subjectivity. This paper introduces the first known application of unsupervised domain adaptation regression for cross-facility beef marbling score prediction—an innovation that improves generalization across diverse environments in the beef supply chain. Utilizing numerical scores ranging from 100-900, the research employed convolutional neural networks (CNNs), including ResNet, VGG, and AlexNet architectures. The study specifically introduced and validated a unified unsupervised domain adaptation regression method using the ResNet-50 architecture to …

Preserving The Past: Exploring The Last Frontier's Ecosystem Shifts And Biodiversity Of The Tallgrass Prairies, Gisell Maldonado, Amelia Villaseñor

Anthropology Undergraduate Honors Theses

In North America, grasslands are a cornerstone of the environment. Historically, the tallgrass prairie was expansive and reached from Manitoba in Canada to Texas. Today this unique ecosystem is highly fragmented and reduced, but it remains an important ecosystem for biodiversity and cattle management. While there are many complex ecological interactions in the prairie, recent research shows that large herbivores are vital in maintaining grasslands through grazing and other behaviors that reduce woody encroachment and support nutrient cycling. Here, we examine cow and bison dietary behaviors and connect these to the ecosystem services provided by these large herbivores. In the …