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Differentiation In The Human Urothelia Is Defined By Distinct Alternative Polyadenylation, Ninh B Le, Surbhi Sona, Briana Santo, Yi Zhang, Rosie Ou, R Allen Schweickart, Veena Kochat, William I Padron, Kunal Rai, Shih-Han Lee, Joo Mi Yi, Oliver Wessely, Byron H Lee, Angela H Ting Jan 2026

Differentiation In The Human Urothelia Is Defined By Distinct Alternative Polyadenylation, Ninh B Le, Surbhi Sona, Briana Santo, Yi Zhang, Rosie Ou, R Allen Schweickart, Veena Kochat, William I Padron, Kunal Rai, Shih-Han Lee, Joo Mi Yi, Oliver Wessely, Byron H Lee, Angela H Ting

Faculty, Staff and Student Publications

Distinct epithelial cell states arise during differentiation, but mechanisms generating transcriptomic diversity among them remain poorly defined. The human ureter urothelium contains basal progenitor, intermediate cells, and terminally differentiated umbrella cells. Prior single-cell RNA sequencing revealed similar global gene expression profiles across these states, raising the question of how distinct identities emerge. Here, we show that alternative cleavage and polyadenylation (APA) introduces a major layer of transcriptomic diversity during urothelial differentiation, largely independent of changes in mRNA levels. Analysis of 13,544 urothelial cells identified hundreds of differentiation-associated APA events. Single-cell imaging revealed spatially specific APA patterns, and reporter assays demonstrated …


Differentiation In The Human Urothelia Is Defined By Distinct Alternative Polyadenylation, Ninh B Le, Surbhi Sona, Briana Santo, Yi Zhang, Rosie Ou, R Allen Schweickart, Veena Kochat, William I Padron, Kunal Rai, Shih-Han Lee, Joo Mi Yi, Oliver Wessely, Byron H Lee, Angela H Ting Jan 2026

Differentiation In The Human Urothelia Is Defined By Distinct Alternative Polyadenylation, Ninh B Le, Surbhi Sona, Briana Santo, Yi Zhang, Rosie Ou, R Allen Schweickart, Veena Kochat, William I Padron, Kunal Rai, Shih-Han Lee, Joo Mi Yi, Oliver Wessely, Byron H Lee, Angela H Ting

Faculty, Staff and Student Publications

Distinct epithelial cell states arise during differentiation, but mechanisms generating transcriptomic diversity among them remain poorly defined. The human ureter urothelium contains basal progenitor, intermediate cells, and terminally differentiated umbrella cells. Prior single-cell RNA sequencing revealed similar global gene expression profiles across these states, raising the question of how distinct identities emerge. Here, we show that alternative cleavage and polyadenylation (APA) introduces a major layer of transcriptomic diversity during urothelial differentiation, largely independent of changes in mRNA levels. Analysis of 13,544 urothelial cells identified hundreds of differentiation-associated APA events. Single-cell imaging revealed spatially specific APA patterns, and reporter assays demonstrated …


Mechanistic Insights Into The Antimicrobial Effect Of Benzodioxane-Benzamides Against Escherichia Coli, Lorenzo Suigo, Alessia Lanzini, Valentina Straniero, William Margolin Jan 2026

Mechanistic Insights Into The Antimicrobial Effect Of Benzodioxane-Benzamides Against Escherichia Coli, Lorenzo Suigo, Alessia Lanzini, Valentina Straniero, William Margolin

Faculty, Staff and Student Publications

Background/Objectives: The bacterial cell division machinery is emerging as an attractive target for antimicrobial compounds. FtsZ, a highly conserved essential division protein, is the target for a number of small molecules such as benzamides. Recent studies show that benzodioxane-benzamides (BDOBs) are among the most potent inhibitors of FtsZ function in Gram-positive bacteria, although their ability to inhibit Gram-negative FtsZ, in particular Escherichia coli FtsZ, has been more controversial.

Methods: Here, we use genetic and cytological methods to demonstrate that FtsZ of efflux pump-disabled E. coli can be efficiently targeted by BDOBs.

Results: We show that engineered mutants …


Systemic Drug Delivery In Pigs Using Biodegradable Microneedle Patches, Katherine A. Miranda-Munoz, Tsungcheng Tsai, Jacy Riddle, Ke He, Lee Blaney, Jeremy Powell, Jorge Almodovar Jan 2026

Systemic Drug Delivery In Pigs Using Biodegradable Microneedle Patches, Katherine A. Miranda-Munoz, Tsungcheng Tsai, Jacy Riddle, Ke He, Lee Blaney, Jeremy Powell, Jorge Almodovar

Biomedical Engineering Faculty Publications and Presentations

Transdermal microneedle systems offer a minimally invasive strategy for systemic drug delivery in veterinary medicine. In this study, biodegradable microneedle patches composed of polyvinyl alcohol, collagen, and chitosan were evaluated in pigs for the delivery of two model compounds, fluorescein isothiocyanate-dextran (FITC-dextran, 4 kDa) and flunixin meglumine (FLU). Patches were applied to the ear and neck to assess the influence of anatomical site on systemic absorption. FITC-dextran delivered via a single 50 mg patch on the neck achieved approximately 1.2-1.4-fold higher plasma concentrations than oral administration and ear-applied patches, demonstrating enhanced uptake from vascularized regions. FLU patches applied to the …


Assessing Mangrove Ecosystem Health And Identifying Optimal Planting Regions Using Remote Sensing And Gis In The Uae, Imen Ben Salem, A. Karthi, Yousef Nazzal Jan 2026

Assessing Mangrove Ecosystem Health And Identifying Optimal Planting Regions Using Remote Sensing And Gis In The Uae, Imen Ben Salem, A. Karthi, Yousef Nazzal

All Works

Mangrove forests play a critical role in carbon sequestration, biodiversity preservation, and coastal resilience, making their conservation and restoration essential in climate change mitigation. This study uses traditional field evaluations and remote sensing and geoinformatics (GIS) methods to examine how mangrove ecosystems in the United Arab Emirates (UAE) have changed over time and space. We used Landsat satellite data from 2001 to 2024 and a set of vegetation indices, including SMRI, NDVI, GNDVI, EVI, and NDCI, to examine spatial patterns in biomass distribution, vegetation density, and overall ecosystem health. CO2 sequestration is a bit more climate-impact resilient. Even though the …


Mechanical Performance Evaluation Of Natural Composites Recycled Hemp Rice Bag Reinforced With And Without Silicon Carbide Particles, Gaber A. Elawadi, A. S. Fayed Jan 2026

Mechanical Performance Evaluation Of Natural Composites Recycled Hemp Rice Bag Reinforced With And Without Silicon Carbide Particles, Gaber A. Elawadi, A. S. Fayed

Mansoura Engineering Journal

Significant progress has been made in the development of natural fiber-reinforced composite materials, owing to their potential to enhance mechanical properties while offering a greener and more sustainable alternative to traditional materials. These materials combine superior ecological benefits with enhanced mechanical performance. This study examines how recycled hemp fiber bags, including recycled hemp fibers obtained from rice hemp fiber bags, affect the mechanical characteristics of unreinforced and reinforced composites. Four composite systems were fabricated and tested: (1) HFR (randomly chipped recycled hemp fiber bags–epoxy composite), (2) HFB (continuous recycled hemp fiber bag–epoxy composite), (3) HFR SiC (randomly chipped recycled hemp …


An Antioxidant Cocktail Of Tert-Butylhydroquinone And A Manganese Porphyrin Induces Toxic Levels Of Oxidative Stress In Cancer Cells, Sandra Tamarin, Hannah Jung, Joseph Lamorte, Laura Biesterveld, Gabriel Piñero, Grace Turchetta, Molly Myers, Rebecca Oberley-Deegan, Aimee Eggler Jan 2026

An Antioxidant Cocktail Of Tert-Butylhydroquinone And A Manganese Porphyrin Induces Toxic Levels Of Oxidative Stress In Cancer Cells, Sandra Tamarin, Hannah Jung, Joseph Lamorte, Laura Biesterveld, Gabriel Piñero, Grace Turchetta, Molly Myers, Rebecca Oberley-Deegan, Aimee Eggler

Student Papers, Posters & Projects

Despite significant advancement in cancer treatments, therapies with minimal toxicity to healthy cells are still limited. One targetable weakness of cancer cells is their sensitivity to oxidative stress. We find that the combination of two antioxidants—the common food additive tert-butylhydroquinone (tBHQ) and a manganese porphyrin in clinical trials, MnTnBuOE-2-PyP5+ (MnBuOE)—increases oxidative stress and causes apoptotic death in several cancer cell lines, but not in mouse primary fibroblasts. Investigating the mechanism of cell death, MnBuOE is observed to catalyze the oxidation of tBHQ, producing the electrophilic quinone tert-butylquinone (tBQ). A critical role for tBQ and its electrophilic character was revealed with …


Habitat Diversity Or Altitudinal Gradient? Which Factor Better Explains Ground Beetle (Coleoptera: Carabidae) Biodiversity? A Case Study From Davraz Mountain (Isparta, Türkiye), Ebru Ceren Fi̇dan, Ali̇ Gök Jan 2026

Habitat Diversity Or Altitudinal Gradient? Which Factor Better Explains Ground Beetle (Coleoptera: Carabidae) Biodiversity? A Case Study From Davraz Mountain (Isparta, Türkiye), Ebru Ceren Fi̇dan, Ali̇ Gök

Turkish Journal of Zoology

Ground beetle (Carabidae) species diversity and spatial distribution were surveyed  across five habitat types along an elevational gradient on Davraz Mountain, a  biogeographical transition area in southwestern Türkiye. The analyses showed that  habitat heterogeneity—particularly soil moisture and texture—exerts a stronger  influence on carabid diversity than elevation. Sørensen’s and Jaccard similarity  indices showed strong faunal overlap between some sampling areas, while  multivariate principal components and canonical correspondence analyses verified  distinct environmental gradients influencing community structure. Diversity indices  indicated varying levels of species richness and evenness across sampling areas.  The data highlight the importance of fine-scaled habitat features in driving ground  beetle …


Distribution Of Mussels In Two Intermittent Upland Streams Of The Arkansas Valley Ecoregion, A. A. Brady, K. B. Hecke, S. A. Drake, Z. R. Crain, K. Moles Jan 2026

Distribution Of Mussels In Two Intermittent Upland Streams Of The Arkansas Valley Ecoregion, A. A. Brady, K. B. Hecke, S. A. Drake, Z. R. Crain, K. Moles

Journal of the Arkansas Academy of Science

Freshwater mussels are facing an increasing need for conservation due to their declining populations. More data is needed on mussel distributions, especially in tributaries of large rivers to properly conserve and restore populations. Big Shoal Creek and Little Shoal Creek are two upland-tributaries of the Arkansas River (Lake Dardanelle) in which no records exist for freshwater mussel populations. We addressed this knowledge gap by sampling a total of 9 sites in Little Shoal Creek and 18 sites in Big Shoal Creek to determine the abundance and distribution of mussels in these streams. Mussels were sampled using a timed-search approach. A …


Growth Performance Of Laying Hens Fed Diets Containing Different Levels Of Palm Kernel Meal And Copra Meal, Aynan Gunawan, Burhanudin Sundu, Ummiani Hatta, Sugiarto Sugiarto Jan 2026

Growth Performance Of Laying Hens Fed Diets Containing Different Levels Of Palm Kernel Meal And Copra Meal, Aynan Gunawan, Burhanudin Sundu, Ummiani Hatta, Sugiarto Sugiarto

Jurnal Ilmu Ternak Universitas Padjadjaran

Abstract

Feed plays an important role in livestock metabolism, especially to support growth, maintain body condition, and production. Therefore, efforts are needed to find high-quality feed ingredients that are easy to obtain, sustainably available, do not compete with human needs, are non-toxic, and economical. One alternative feed ingredient that can be optimized to reduce feed costs is industrial waste, such as coconut meal and palm kernel meal. This research was conducted at the Laboratory of the Faculty of Animal Husbandry and Fisheries, Tadulako University, Palu, for five weeks, namely from March 19, 2022 to May 20, 2022. A total of …


Effect Of Corn Flour Addition On The Physical And Chemical Quality Of Wedelia Trilobata (L) Hitchc Weed Silage For Ruminant Livestock Feed, Ajat Sudrajat, Retno Galuh Syaharani, Nur Rasminati, Wahyu Candra Saputra, Niken Astuti, Raden Febrianto Christi, Fazhana Ismail Jan 2026

Effect Of Corn Flour Addition On The Physical And Chemical Quality Of Wedelia Trilobata (L) Hitchc Weed Silage For Ruminant Livestock Feed, Ajat Sudrajat, Retno Galuh Syaharani, Nur Rasminati, Wahyu Candra Saputra, Niken Astuti, Raden Febrianto Christi, Fazhana Ismail

Jurnal Ilmu Ternak Universitas Padjadjaran

Research on the physical and chemical quality of weed silage with the addition of corn flour has been carried out. The research was carried out on November 30, 2024 – February 25, 2025 at the Animal Nutrition Laboratory of the Animal Husbandry Study Program, Mercu Buana Yogyakarta University and the Chem-Mix Bantul laboratory, Yogyakarta. The study used an experimental method with a complete random design (RAL) in a unidirectional pattern using 4 treatments, namely P0 (no treatment), P1 (1% corn flour), P2 (3% corn flour) and P3 (5% corn flour), then each treatment was replicated three times. In each treatment, …


Fuzzy Pi Controller For Frequency Control Of A Diesel-Pv-Battery-Based Islanded Ac Microgrid, M. S. Elborlsy, Ramadan M. Mostafa, Hossam E. Keshta, Mohamed A. Ghalib Jan 2026

Fuzzy Pi Controller For Frequency Control Of A Diesel-Pv-Battery-Based Islanded Ac Microgrid, M. S. Elborlsy, Ramadan M. Mostafa, Hossam E. Keshta, Mohamed A. Ghalib

Mansoura Engineering Journal

Effective management of modern electrical grids requires intelligent and adaptable control mechanisms to effectively balance power supply and demand, particularly in times of significant disturbances. Microgrids predominantly harness renewable energy sources (RES), which are inherently variable, for electricity generation. However, due to these fluctuations, conventional control systems often struggle to optimize performance under diverse operational conditions. This study addresses the need for improved frequency regulation in isolated AC microgrids (MGs) by proposing a fuzzy PI (FPI) controller capable of dynamically adjusting control strategies to accommodate disturbances such as three-phase faults, sudden changes in load, and variations in solar irradiance. A …


Agronomic, Nitrogen Use, And Economic Efficiency Of Winter Wheat (Triticum Aestivum L.) Under Variable-Rate Versus Uniform Nitrogen Fertilization, Judith Ntow Oppong, Clement Elumpe Akumu, Felix Ogunmokun, Stephanie Anyanwu, Chaz Hardy Jan 2026

Agronomic, Nitrogen Use, And Economic Efficiency Of Winter Wheat (Triticum Aestivum L.) Under Variable-Rate Versus Uniform Nitrogen Fertilization, Judith Ntow Oppong, Clement Elumpe Akumu, Felix Ogunmokun, Stephanie Anyanwu, Chaz Hardy

Agricultural and Environmental Sciences Faculty Research

Efficient nitrogen (N) management is essential for sustaining crop productivity while minimizing environmental impacts associated with excessive fertilizer use. Variable-rate application (VRA) offers a precision-based approach to matching N inputs with crop demand, yet winter wheat responses to reduced N rates are still underexplored. This study evaluated winter wheat (Triticum aestivum L.) performance under variable and uniform N application strategies using canopy greenness (NDVI), grain yield, plant N content, nitrogen use efficiency (NUE), and fertilizer costs as indicators. Reduced N treatments (40% and 60% VRA rates) were compared with a uniform (100%) application. Canopy greenness increased across all treatments over …


Clinical Workflow Of Spine Stereotactic Radiotherapy And Radiosurgery: Insights From A Single-Institution Physics Perspective, Dennis Mackin, Gizem Cifter, Yana Zlateva, Jihong Wang, Yao Ding, Muhammad Shafiq Ul Hassan, Zhiheng Wang, Parmeswaran Diagaradjane, Fada Guan, Travis C Salzillo, Shane Krafft, Jing Li, Martin C Tom, Amol J Ghia, Tina Marie Briere Jan 2026

Clinical Workflow Of Spine Stereotactic Radiotherapy And Radiosurgery: Insights From A Single-Institution Physics Perspective, Dennis Mackin, Gizem Cifter, Yana Zlateva, Jihong Wang, Yao Ding, Muhammad Shafiq Ul Hassan, Zhiheng Wang, Parmeswaran Diagaradjane, Fada Guan, Travis C Salzillo, Shane Krafft, Jing Li, Martin C Tom, Amol J Ghia, Tina Marie Briere

Faculty, Staff and Student Publications

Spine stereotactic radiotherapy and radiosurgery (SSRS) techniques, encompassing both fractionated stereotactic treatments and single-fraction radiosurgery, are widely used for the management of spinal metastases due to their ability to deliver highly conformal radiation while limiting dose to adjacent critical structures. Clinical outcomes following SSRS, including durable local control and acceptable toxicity, have been reported previously in multiple institutional series. In this manuscript, we describe the clinical workflow used to deliver SSRS at a high-volume academic center, with emphasis on the medical physics processes that support routine clinical practice. Key elements of the workflow include patient selection, treatment region-specific immobilization, CT …


Reverse Micelles Produce Hydroxyapatite Nanoparticles As More Efficient Gene Delivery Carriers Than Regular Micelles, Vuk Uskoković Jan 2026

Reverse Micelles Produce Hydroxyapatite Nanoparticles As More Efficient Gene Delivery Carriers Than Regular Micelles, Vuk Uskoković

Administration and Staff Articles and Research

Hydroxyapatite (HAp) is an effective inorganic gene delivery carrier due to its ability to transport genetic cargo across cell membranes, protect it from proteolysis, and enable escape from late endosomes via pH-controlled dissolution. However, its transfection efficiency remains lower than that of viral agents, prompting studies of hybrids with cationic molecules or phases to enhance the gene delivery performance. This study reports on the synthesis of HAp in regular and reverse micellar regions of a ternary microemulsion system composed of cetyltrimethylammonium bromide (CTAB), 1-hexanol and water. Spectroscopic characterization revealed that CTAB headgroups adopted more ordered supramolecular conformations in reverse micelles …


Long-Term Changes In Relative Humidity And Soil Wetness: Implications On Agriculture And Environmental Sustainability In Western Himalaya, Ashwani Ashwani, Pankaj Kumar Jan 2026

Long-Term Changes In Relative Humidity And Soil Wetness: Implications On Agriculture And Environmental Sustainability In Western Himalaya, Ashwani Ashwani, Pankaj Kumar

Journal of Environmental Science and Sustainable Development

Long-term climate changes in humidity and soil wetness in the cold deserts of the Western Himalaya are still not well researched. Understanding the long-term trends of relative humidity (RH) and soil moisture is crucial in high-altitude, cold desert regions for effective agricultural management and environmental sustainability. The study was conducted in a part of the western Himalaya, which is an ecologically fragile zone with a highly sensitive agricultural region that is vulnerable to climatic variations. A comprehensive study was conducted to evaluate the spatiotemporal variability of RH and soil wetness by means four techniques: Mann-Kendall, Modified Mann-Kendall, Sen’s slope estimator, …


Mulching And Time Of Planting Impact On Southern Blight Disease And Industrial Hemp Production, Sai Suvidh Maddela, Emmanuel C. Omondi, Margaret T. Mmbaga, Anand Kumar, Mitchell Dale Richmond, Philip O. Hinson, Bharat Pokharel Jan 2026

Mulching And Time Of Planting Impact On Southern Blight Disease And Industrial Hemp Production, Sai Suvidh Maddela, Emmanuel C. Omondi, Margaret T. Mmbaga, Anand Kumar, Mitchell Dale Richmond, Philip O. Hinson, Bharat Pokharel

Agricultural and Environmental Sciences Faculty Research

Southern blight, a disease caused by the soil-borne fungus Sclerotium rolfsii (S. rolfsii), is favored by the hot and humid conditions of the southeastern United States, posing a significant challenge to hemp production in Tennessee. Black plastic mulch (BPM), commonly used for weed control, can exacerbate the disease. There is limited information on the effects of straw mulch (SM), known to moderate soil temperatures and moisture, or planting time in disease management. Field studies were conducted in 2022 and 2023 at Tennessee State University to evaluate the effects of planting time, mulch type, and biofungicide application on disease severity, weed …


Temporal Variation Of Benthic Aquatic Macroinvertebrate Communities In Two Upland Intermittent Streams In The Boston Mountains, R. J. Mccollough, K. B. Hecke Jan 2026

Temporal Variation Of Benthic Aquatic Macroinvertebrate Communities In Two Upland Intermittent Streams In The Boston Mountains, R. J. Mccollough, K. B. Hecke

Journal of the Arkansas Academy of Science

Benthic aquatic macroinvertebrates are some of the most highly used organisms for biomonitoring and assessing stream health. However, biomonitoring is often done in one season, potentially missing important taxa and inaccurately reflecting the community as well as stream health. In addition, while road crossing effects have also been extensively researched the last few decades, these studies are also often conducted in one season, likely misrepresenting the community structure and the overall effects of the road crossing. The highly known River Continuum Concept (RCC) is often applied to these benthic aquatic macroinvertebrate communities. This study aimed to examine aquatic macroinvertebrate communities …


Reproductive Biology Of Hybopsis Amblops, The Bigeye Chub, In The Flint River Of Alabama, Crissy L. Tarver, Bruce W. Stallsmith Jan 2026

Reproductive Biology Of Hybopsis Amblops, The Bigeye Chub, In The Flint River Of Alabama, Crissy L. Tarver, Bruce W. Stallsmith

Southeastern Fishes Council Proceedings

The purpose of this study was to establish a reproductive schedule and examine reproductive traits that shape fecundity of the Bigeye Chub, Hybopsis amblops Leuciscidae in the Flint River system of north Alabama. Traits associated with reproduction, growth, and maturation were assessed. Specimens were collected and examined monthly from August, 2013 until July, 2014. This Bigeye Chub population primarily spawns in April and May as indicated by gonadosomatic index (GSI), ovarian condition and clutch size. Mean GSI values began to rise in February, peaking in April and May at over 13% for females and 1.6% for males. There was a …


Prevention Of Postoperative Nausea And Vomiting In Early Recovery: A Comparative Study Of Ondansetron And Metoclopramide In Adults Undergoing Elective Lower Abdominal Surgery, Majid Fakhir Al-Hamaidah, Ali Ihsan Abdul Mahdi, Maytham Alaa Shahid, Sajjad Salih Rasan, Lina M. Shaker, Shahab Abdulla, Ralela Makline Jan 2026

Prevention Of Postoperative Nausea And Vomiting In Early Recovery: A Comparative Study Of Ondansetron And Metoclopramide In Adults Undergoing Elective Lower Abdominal Surgery, Majid Fakhir Al-Hamaidah, Ali Ihsan Abdul Mahdi, Maytham Alaa Shahid, Sajjad Salih Rasan, Lina M. Shaker, Shahab Abdulla, Ralela Makline

AUIQ Complementary Biological System

Postoperative nausea and vomiting (PONV) remain common complications following surgery, despite the availability of various prophylactic antiemetic agents. This study aimed to compare the effectiveness of ondansetron and metoclopramide in preventing PONV in patients undergoing elective lower abdominal surgery under general anesthesia. In this double-blind, randomized controlled trial, 80 adult patients were equally allocated into two groups: one receiving 0.1 mg/kg of intravenous ondansetron and the other 0.2 mg/kg of intravenous metoclopramide at the end of surgery. The incidence, frequency, and need for rescue antiemetics were evaluated over 24 hours postoperatively. The overall incidence of nausea was higher in the …


Biology Department Publications: 2025, Sam Lindgren Jan 2026

Biology Department Publications: 2025, Sam Lindgren

Biology Department Bibliographies

This document is a non-comprehensive list of publications made by graduate students, post-doctoral researchers, and faculty members in the Biology Department in 2024. It indexes those publications available through PubMed, and serves as an archival record of the Department's robust scholarly contributions.


Frontiers In Ocean Non-Equilibrium Dynamics And Challenges In Operational Oceanography Application, Yuhong Zhang, Yan Du, Tianyu Wang, Minyang Wang, Qin Duan, Xinlong Li, Yuhang Zheng, Yifan Xia, Shilin Tang, Yineng Li, Jianping Yin Jan 2026

Frontiers In Ocean Non-Equilibrium Dynamics And Challenges In Operational Oceanography Application, Yuhong Zhang, Yan Du, Tianyu Wang, Minyang Wang, Qin Duan, Xinlong Li, Yuhang Zheng, Yifan Xia, Shilin Tang, Yineng Li, Jianping Yin

Bulletin of Chinese Academy of Sciences (Chinese Version)

Ocean circulation exhibits complex multiscale dynamics, among which non-equilibrium processes, marked by transient behavior, strong perturbations, and pronounced nonlinearity, are of particular importance for maritime environmental support. However, limited observational capability has long constrained the study of subsurface non-equilibrium dynamics, leaving numerical models insufficiently validated and positioning this issue at the forefront of modern physical oceanography. Artificial intelligence (AI) offers a promising pathway to overcome this bottleneck. Built on this concept, the “iEddy” AI large ocean model can efficiently reconstruct high-resolution, high-accuracy three-dimensional temperature, salinity, and velocity from sea-surface remote sensing data, demonstrating strong capability in capturing non-equilibrium ocean currents …


Current Status And Prospects Of Ocean Data Reanalysis, Chuanyu Liu, Fan Wang Jan 2026

Current Status And Prospects Of Ocean Data Reanalysis, Chuanyu Liu, Fan Wang

Bulletin of Chinese Academy of Sciences (Chinese Version)

Ocean data reanalysis (ODR) is a technique that combines ocean observational data with ocean circulation models to produce gridded data with higher accuracy and greater spatiotemporal coverage. The generated reanalysis data serve as a foundational dataset for conducting oceanographic research and developing artificial intelligence-based large ocean models. This study reviews the technical approaches of ODR, the current status of global and regional ocean data reanalysis systems developed in the world, and puts forward recommendations for the development of China's ocean reanalysis system.


Transparent West-Pacific: Frontier Advances In Earth System Science, Lixin Wu, Jiwei Tian, Weidong Sun, Hailong Liu, Tianyu Chen, Zhimian Cao, Zhao Jing Jan 2026

Transparent West-Pacific: Frontier Advances In Earth System Science, Lixin Wu, Jiwei Tian, Weidong Sun, Hailong Liu, Tianyu Chen, Zhimian Cao, Zhao Jing

Bulletin of Chinese Academy of Sciences (Chinese Version)

The West-Pacific hosts a well-developed trench-arc-basin system characterized by intense fluid–solid interactions, making it an ideal region for studying multi-sphere interactions within the Earth system. Research on cross-sphere dynamic processes and material-energy cycles in the West-Pacific not only represents a core frontier in Earth System Science, but also crucial to addressing major strategic needs, such as global climate change response, sustainable use of marine resources, and protection of the deep-sea environment. This article highlights key advances achieved under the Major Program on West-Pacific Earth System Multispheric Interactions (WESPMI), in areas including multi-scale oceanic interactions, cross-sphere material exchange, plate subduction and …


Satellite-Derived Bathymetry In Island Coastal Zones: Technology, Shilin Tang, Yuye Huang, Yongming Liu, Jianping Yin, Deke Chen, Ronggang Huang, Shuang Li Jan 2026

Satellite-Derived Bathymetry In Island Coastal Zones: Technology, Shilin Tang, Yuye Huang, Yongming Liu, Jianping Yin, Deke Chen, Ronggang Huang, Shuang Li

Bulletin of Chinese Academy of Sciences (Chinese Version)

Shallow bathymetry data constitute the core foundational information underpinning the ecological, resource, and strategic values of island and coastal zones. Satellite-derived bathymetry has evolved into a key technical means for large-scale acquisition of shallow bathymetry information. Focusing on satellite-based lidar bathymetry, optical imaging bathymetry, and synthetic aperture radar (SAR) bathymetry, this study systematically summarizes the core principles, applicable scenarios, technical strengths, and inherent limitations of each technology. It is shown that satellite-derived bathymetry has undergone an evolutionary shift from theoretical construction to practical application, and from single-method, single-data-source approaches to multi-technology, multi-source data fusion frameworks. In the future, to meet …


Simulated Complex Cells Contribute To Object Recognition Through Representational Untangling, Mitchell B Slapik, Harel Z Shouval Jan 2026

Simulated Complex Cells Contribute To Object Recognition Through Representational Untangling, Mitchell B Slapik, Harel Z Shouval

Faculty, Staff and Student Publications

The visual system performs a remarkable feat: it takes complex retinal activation patterns and decodes them for object recognition. This operation, termed "representational untangling," organizes neural representations by clustering similar objects together while separating different categories of objects. While representational untangling is usually associated with higher-order visual areas like the inferior temporal cortex, it remains unclear how the early visual system contributes to this process-whether through highly selective neurons or high-dimensional population codes. This article investigates how a computational model of early vision contributes to representational untangling. Using a computational visual hierarchy and two different data sets consisting of numerals …


Development Trends And Implications Of Muti-Objective Marine Environmental Forecasting Technology, Yineng Li, Yuhang Zhu, Shiqiu Peng, Zhiwu Chen, Xing Wei, Junmin Li, Shaodian Li, Peiwei Xie, Jiawen Liao, Yankun Gong, Shilin Tang, Shuqun Cai Jan 2026

Development Trends And Implications Of Muti-Objective Marine Environmental Forecasting Technology, Yineng Li, Yuhang Zhu, Shiqiu Peng, Zhiwu Chen, Xing Wei, Junmin Li, Shaodian Li, Peiwei Xie, Jiawen Liao, Yankun Gong, Shilin Tang, Shuqun Cai

Bulletin of Chinese Academy of Sciences (Chinese Version)

With the continuous expansion of global maritime activities and the steady advancement of the “maritime power” strategy, marine environmental security has become a top priority for China. In deep-sea areas, various environmental parameters such as temperature, salinity, sound velocity, wave dynamics, internal solitary waves, and nearshore rip currents play a crucial role in navigation safety and underwater equipment operations. Nevertheless, traditional single-parameter forecasting models are no longer sufficient to meet the demands of multi-objective environmental protection. As a result, there is a growing need for a high-resolution, multi-objective forecasting system that integrates basic oceanographic element predictions (such as temperature, salinity, …


Innovative Applications And Development Paths Of Digital Earth Technology In Marine Environmental Support, Junyi Liu, Xiongfei Liu, Zongji Wang, Zhihong Zeng, Huiping Xie, Siye Liu Jan 2026

Innovative Applications And Development Paths Of Digital Earth Technology In Marine Environmental Support, Junyi Liu, Xiongfei Liu, Zongji Wang, Zhihong Zeng, Huiping Xie, Siye Liu

Bulletin of Chinese Academy of Sciences (Chinese Version)

The convergence of Digital Earth technologies and the field of marine environmental support represent a significant trend in global scientific and technological advancement. In response to the characteristics of marine environmental data such as sparsity, dynamic complexity, and multi-scale interdependence, and by integrating the evolution of international Digital Earth technology with China’s independent innovation practices, this study constructs three core methodological paradigms. The first is the element-integrated ontology, which proposes a hybrid representation paradigm of “spatiotemporal embedded field + ontology” to achieve integrated and dynamically evolving modeling of marine physical environments alongside geological, biological, chemical, and other multidimensional elements. The …


Biopcm-Integrated Smart Façade For Hospitals: Thermal Performance Across Floor Levels In A Hot-Arid Climate, Aia A. Qindil, Esraa Elazab, Mohamed M. Shawky Abou Liela Jan 2026

Biopcm-Integrated Smart Façade For Hospitals: Thermal Performance Across Floor Levels In A Hot-Arid Climate, Aia A. Qindil, Esraa Elazab, Mohamed M. Shawky Abou Liela

Mansoura Engineering Journal

Hospitals are among the most energy-intensive building types because they operate around the clock and must maintain strict indoor environmental conditions, especially in hot-arid climates. Improving their performance calls for façade solutions that can store thermal energy effectively and help cut carbon emissions. This study evaluates the use of macro-encapsulated BioPCM® within the south façade of a high-rise hospital in Mansoura, Egypt, using dynamic simulations in DesignBuilder (EnergyPlus). The analysis focuses on two vertical levels, the third floor as a typical ward and the seventh floor as a rooftop ward, to investigate how elevation influences PCM performance, an aspect rarely …


Credit Card Fraud Detection Using Metaheuristic Techniques, Narges Sabry Anwer Mohammed, Mohammed Sabry Saraya, Amr M. Thabet, Labib M. Labib Jan 2026

Credit Card Fraud Detection Using Metaheuristic Techniques, Narges Sabry Anwer Mohammed, Mohammed Sabry Saraya, Amr M. Thabet, Labib M. Labib

Mansoura Engineering Journal

Credit Card Fraud Detection (CCFD) has become a critical challenge to financial security due to increasingly sophisticated fraudulent activities. This study investigates the effectiveness of Meta-Heuristic (MHT) optimization techniques in improving fraud detection (FD) through feature selection (FS) and model optimization. To address class imbalance, Random Under-Sampling (RUS) was applied. The selected feature subsets were evaluated using three machine learning (ML) classifiers—Decision Tree (DT), KNearest Neighbours (KNN), and XGBoost (Xgb-Tree)—across four benchmark datasets: European, Statlog (Australian Credit Approval), PaySim, and Credit Card Transactions Fraud Detection (CCTFD). Eleven binary MHT algorithms were implemented and compared. The comparative analysis shows that the …