Digital Commons Network^™

Current Aspects Of Eco-Physiological Studies Of Meadow Plants, Momcilo Konic

IGC Proceedings (1977-2023)

Basic parameters applied in eco-physiological studies of meadow plants are: water balance (hydration, transpiration intensity, amounts and forms of water, water deficit, etc.), assim­ilation balance (CO2 balance, assimilation performance, compensation effect), matter pro­duction. Eco-physiological studies should be followed by microclimatic measurements and the anatomical analysis of the meadow plants under study. Eco-physiological studies of meadow plants, if performed in a complex and systematic way, constitute the safest basis for detennining the characters of the entire meadow plant com­munity under the concrete conditions of natural factors prevailing in terms of natural condi­tions and human influence.

Spatiotemporal Trends In Schistocephalus Solidus Infection Among Populations Of Alaskan Threespine Stickleback (Gasterosteus Aculeatus), A.M Wohlleben, Neva Meyer, N.C. Steinel

Biology

Understanding the dynamics of host-parasite interactions is essential for uncovering the ecological and evolutionary processes shaping natural populations. In this study, we investigated the spatial and temporal patterns of prevalence of the cestode Schistocephalus solidus in 4 Alaskan populations of threespine stickleback (Gasterosteus aculeatus) over 11 years (1996 to 2006). Additionally, we assessed host tolerance through key indicators such as the Parasite Index and the presence of fibrotic scar tissue, a specialized form of resistance in this system. We observed fibrosis formation in both infected and uninfected fish across all populations, with notable year-to-year variability in Cornelius Lake. Here, fibrosis …

Defining Life: A Conversation, K. Kofman, C. Adami, F. Baluška, J. Bongard, D. Brash, P. Calvo, G. Dodig-Crnkovic, P. Das, C. Fields, T. Froese, P. L. Gentili, G. Y. Georgiev, Scott F. Gilbert, T. N. W. Jackson, S. Kauffman, N. Lane, P. Marshall, D. Mcshea, W. Miller, S. Newman, A. Nunn, T. P. Pavlic, M. Picard, W. Ratcliff, A. Reber, J. Shapiro, A. Sloman, R. Solé, C. Sonnenschein, S. Stepney, R. Watson, O. Witkowski, M. Levin

Biology Faculty Works

Life is one of the most fascinating features of the physical world. Despite centuries of scientific study, experts still disagree about the definition, and even the possibility or utility of a definition, of this field. In a recent paper, we used AI to analyze the conceptual space formed by definitions of life given by a select set of modern workers in the life sciences and related fields. However, some of the most interesting material emerged as real-time conversations among those polled. In order to ensure that these ideas are not lost to the peer-reviewed scientific record, we here provide a …

Tree Layer Composition And Regeneration Status Of Quercus Floribunda Lindl. On Different Aspects Of Nainital Catchment In Kumaun Himalaya, Ambica Agnihotri, Ashish Tewari, Shahbaz Ali

Journal of Environmental Science and Sustainable Development

Oaks are climax-forming species found at various elevations in the Himalayas between 2100– 2700 masl. However, aspect-wise regeneration patterns of Quercus floribunda in the Nainital catchment remain poorly documented. While previous studies focused on oak forest structure, the present study provides new insight into aspect-wise variation in the regeneration stages of Q. floribunda in relation to microclimatic conditions. The present study aims to evaluate tree composition and the regeneration status of Q. floribunda forests across different slope aspects in the Nainital catchment area of the Kumaun Himalaya. Four sites representing different slope aspects were selected in the Nainital catchment. Soil …

Advanced Hybrid-Green Ultrasound–Infrared–Microwave Trifolium Repens Essential Oil Isolation With Multi-Target Ethnomedicine Bioactivity Against Neuropathy, Inflammation And Multidrug-Resistant Infection, Sara Al Ayoubi, Ibrahim Abdelwahab, Maha Aboul-Ela, Abdalla El- Lakany, Karim Raafat

Journal of Food and Drug Analysis

Trifolium repens (white clover) is rich in bioactive volatiles with therapeutic potential. This study developed an advanced hybrid ultrasound–infrared–microwave hydro-distillation (UIMHD) method for efficient essential oil (EO) isolation and investigated its active sesquiterpene, pseudoionone, for multi-mechanistic neuroprotection in diabetic neuropathy (DN). The optimized UIMHD system synergistically combined ultrasound cavitation, infrared heating, and microwave hydro-distillation, enhancing yield and reducing time versus conventional extraction. Gas chromatography–mass spectrometry (GC–MS) profiling identified pseudoionone as the dominant constituent. Pharmacological evaluations were performed in alloxan-induced diabetic mice to assess antidiabetic, anti-inflammatory, neuroprotective, and anticonvulsant activities. Cytokine modulation (TNF-α, IL-6, IL-10), oxidative stress markers (CAT, GSH, TBARS), …

Spatial Distribution: Effect Of Oxygen Availability On Gut Microbiota Adhesion And Colonization, Ruixue Ding, Xiaotong Sun, Yinan Wang, Binbin Tu, Yue Liang, Qi Lin, Fuqiang Zhao

Journal of Food and Drug Analysis

The gut microbiota plays a crucial role in host digestion and immune regulation; however, most existing research relies on fecal sampling, leaving uncertainty regarding whether fecal microbiota can accurately reflect the symbiotic microbial components at distinct gut sites. To address this gap, this study employed 16S rRNA gene sequencing to systematically analyze the microbial composition of three spatial compartments in the rat colon: luminal contents, mucus layer, and epithelial tissue. The results revealed notable differences in microbial communities across the three compartments. The luminal contents, which were closely associated with the fecal microbiota, exhibited high microbial abundance, encompassing gram-positive bacteria, …

The Protective Potential Of Intestinal Bifidobacterium-Derived Extracellular Vesicles With Unique Lipid Composition Against Blue Light-Induced Damage In Retinal Cells, Wei-Hsuan Hsu, Pin-Hsuan Su, Hao-Yuan Chien, Tzu-Ming Pan, Bao-Hong Lee

Journal of Food and Drug Analysis

Bifidobacterium longum is a probiotic that resides in the intestine, and extracellular vesicles (EVs) released by microorganisms have garnered attention in recent years for their role in regulating host health. This study found that triacylglycerol, cholesteryl esters, and free fatty acid (18:0 and 16:0) are primarily composed of lipids in B. longum-derived EVs by lipidomics assay. Such lipid composition facilitates the entry of EVs into ARPE-19 cells and protects the cells from oxidative death induced by blue light exposure. Transcriptomic analysis revealed that treatment with B. longum-derived EVs can regulate phosphoinositide 3-kinase and mTOR, thereby enhancing the survival …

The Evolution Of Desi-Msi: A Comprehensive Look At Preprocessing And Quantification Strategies For Metabolomics, Cheng-Hung Yang, Hung-Yao Ho, Chen-Yu Chang, Mei-Ling Cheng

Journal of Food and Drug Analysis

Mass spectrometry imaging (MSI) has become an indispensable tool in metabolomics for visualizing the spatial distribution of biomolecules within tissues. Due to its direct, ambient analysis capability, desorption electrospray ionization (DESI-MSI) has evolved from a rapid screening tool into a precise and reliable quantitative platform. We delve into its technical principles and particularly review the criticality of sample preprocessing, highlighting the paradigm shift from a "no-preprocessing" approach to one of "optimized preprocessing." The paper details how factors like sample preservation, choice of embedding agents, washing, drying, and on-tissue chemical derivatization all impact data quality. We also discuss how the addition …

Bibliometric Analysis Of Applications And Research Trends On Whole Milk In Food Science, Nautus Stivano Dalle, Juni Sumarmono

Jurnal Ilmu Ternak Universitas Padjadjaran

This study maps the scientific landscape and research trends on whole milk in food science using a bibliometric approach. Data were collected from Google Scholar via Publish or Perish 8 (2020–2025) using the keyword "whole milk," yielding 291 documents after applying inclusion criteria. Descriptive and visual analyses were performed using VOSviewer and the Bibliometrix package to identify publication trends, collaboration networks, and dominant themes through co-authorship and keyword co-occurrence analyses. Results revealed fluctuating publication patterns, peaking in 2021 (60 articles) and declining in 2025 (41 articles). Keyword mapping identified four major clusters: microbiological characterization and probiotic potential, milk bioactive and …

Physicochemical, Organoleptic, And Antioxidant Functional Characteristics Of Dangke Whey Protein Ice Cream Fortified With Butterfly Pea Flower Extract, Muh. Achyar Ardat, Raden Hilman Wirayudha, Ekajayanti Kining, Zakiah Wulandari, Irma Isnafia Arief

Jurnal Ilmu Ternak Universitas Padjadjaran

This study aims to develop a functional ice cream based on dangke whey pro‐ tein with the addition of butterfly pea flower extract. Four formulations were pre‐ pared by varying milk and whey proportions: P1 (100% milk), P2 (60% milk + 40% whey), P3 (40% milk + 60% whey), and P4 (100% whey), with 5% butterfly pea ex‐ tract added to each treatment. The results showed that higher whey substitution decreased pH and overrun values but prolonged the melting resistance of ice cream. Moisture content increased with whey proportion, whereas ash content remained relatively constant across treatments. Protein and fat …

Consumer Preferences And The Impact Of Halal Labeling On Beef Purchasing Decisions In Modern Market Segments, I Putu Gede Didik Widiarta, Amalina Nur Wahyuningtyas, Andi Nurmasytha, I Gede Arie Mahendra Putra

Jurnal Ilmu Ternak Universitas Padjadjaran

Global demand for halal-certified products is rapidly increasing, underscoring the importance of understanding consumer preferences and the impact of halal labelling on purchasing decisions. This study examines the relationship between halal labelling, consumer trust, and purchasing behaviour of beef in modern markets in East Kalimantan, Indonesia. A quantitative survey was conducted with 400 respondents from diverse demographic backgrounds. The results show that 75% of consumers prefer halal-certified beef, with 80% perceiving halal labels as indicators of superior product quality and safety. Logistic regression analysis revealed that consumers who trust halal labels are 2.5 times more likely to purchase halal-certified beef …

Gendered Analysis Of Fish Feed Ingredients And Sourcing Practices In Western Kenya’S Aquaculture, Kristie Drucza, Sujata Ganguly, Rodrigue Yossa, Chrysantus Tanga

All Peer-Reviewed Publications

Introduction – Fish feed management plays a central role in aquaculture productivity, but it is rarely analysed through a gender lens. This study examines how women and men differ in their use and sourcing of fish feed ingredients in smallholder aquaculture systems in Western Kenya. Drawing on feminist economics, it explores how everyday roles, access to resources, and mobility shape feed practices. Methods – The analysis uses survey data from 213 fish farmers, including 112 women and 101 men, across six counties in Western Kenya. A binary logit model was used to assess factors associated with the use of selected …

Influence Of Peristalsis On The Hemodynamic Analysis Of Magnetohydrodynamic Jeffrey Fluid In A Two-Layered Narrow Channel, N. Lavanya, G. Ravi Kiran, M. Varun Kumar, K. Rajyalakshmi

Mansoura Engineering Journal

In this paper, an analytical study of MHD-influenced hemodynamic of Jeffrey fluid during peristaltic transport in a two layered narrow channel is presented, a phenomenon that has substantial ramifications for microcirculatory dynamics in the cardiovascular system. The model assumes a Jeffery fluid in the core area to encapsulate microstructural phenomena, including viscosity fluctuations, whereas the periphery area is treated as a Newtonian fluid. The governing equations for both regions are simplified and analytically solved under the long wavelength approximation. Using MATHEMATICA, a numerical investigation is carried out to examine the influence of various parameters, such as the magnetic parameters, amplitude, …

Strategic Leverage Points For Effective Watershed Governance: A Micmac Structural Analysis Approach, Ivan Taslim, Sambas Basuni, Moh. Yanuar Jarwadi Purwanto, I Putu Santikayasa

Journal of Environmental Science and Sustainable Development

Over the past two decades, watershed governance in Indonesia has been challenged by rapid land-use change, fragmented institutions, and limited integration of scientific evidence into policy. Previous studies have primarily evaluated watershed sustainability using hydrological or socio-economic indicators, whereas the structural relationships among governance, socio-economic, and biophysical factors remain insufficiently explored. To address this gap, this study applies the Matrix of Cross-Impact Multiplications Applied to Classification (MICMAC) method to examine direct and indirect relationships among watershed governance factors. A pentahelix stakeholder analysis involving government, academia, non-governmental organizations, media, and industry was conducted to evaluate 37 factors identified through a systematic …

The Breeding Of Tetraploid Alsike Clover (Trifolium Hybridum L.) For Mowing And Grazing, Vladimir Malashenko, Svetlana Cheprasova, Antonina Fadeeva

IGC Proceedings (1977-2023)

An account is given of the long-range im­portance that should be attributed to the use of No. 701 tetraploid alsike clover as an early ­maturity, fast-growing, high-yield competitive leguminous plant for irrigated pastures and arable forage cultivation.

Leguminous plants are of very great im­portance to forage production at large. They actually constitute a major source for nitrogen supply. This underlines their decisive role in grassland farming as a device by which to get to grips with the nitrogen deficit. Pasture pro­ductivity can best be improved by proper arrangement of plant associations with forage crop partners of the legume family which …

Possibilities Of Improving The Feeding Value Of Alfalfa By Breeding, R Steuckardt, I Bocsa

IGC Proceedings (1977-2023)

1. The character "in vitro digestibility" repre­sents a complex factor. It is fixed by genetic constitution. Certain correiations were found to exist between the digestibility coefficients (DC) established in the individual cuts, as well as between the DC found in the two years of alfalfa use tested.

2. The in vitro digestibility shows sufficient variability, thus offering an adequate range for a selection programme to improve the feeding value of alfalfa. With such pro­grammes it is, however, necessary at the same time to maintain or even to further improve matter production. The effect of characters correlating with digestibility (po­sitive correlation) …

A Study Of Seed Formation In Alfalfa With Respect To Environmental Conditions And Pollinating Mode, Alena Vachunova

IGC Proceedings (1977-2023)

The influence of pollinating mode and of conditions for seed formation was studied on 30 clones of different genetic constitution. The average yields per plant have changed markedly under the influence of environmental conditions, especially of variable precipitation.

The correlation between the years was positive and significant. The number of flowers forming pods and also the average number of seeds per flower and per pod are in close relation to the seed yield of the individual plants, not only under self-pollination but also under open pollination. In the dry year of 1973, the correlation coef­ficients under open pollination were lower …

The Effects Of Global Radiation Before Harvesting Upon The Digestibility Of The Dry Matter Of Some Grass Species, W Schoberlein, W Lampeter

IGC Proceedings (1977-2023)

Four micro-trials with 6 breeding varieties each of Lolium multijlorum, Lolium perenne and Dac­tylis glomerata (early and late groups) were carried out under field conditions. Neither artificial reduction in daylight by means of a sunshade nor storage of the fresh mass in a dark room with the stems kept in water or else in a plastic bag resulted in abrupt decrease in digestibility as common under conditions of low global radiation. The findings point to the possibility that the composition of the diffuse light on days with poor radiation deviates from the diffuse light under a sunshade on days with …

The Gene Pool And Its Use In Breeding Grassland Plants, Anna Novoselova

IGC Proceedings (1977-2023)

1. The gene pool of grassland plants is of great diversity and localized in certain centres of origin where the carriers of germ plasma are concentrated for the most important bio­logical characters and properties of a great variability of species.

2. New intensive varieties for mowing and grazing have been bred by advanced breeding methods and by taking advantage of the gene pool of the most important plant species throughout the world.

3. Wild-growing species were found to have great prospects for opening up soils of poor productivity by mowing and grazing use. They constitute a great reserve of genetic …

The Environment And Population Differences In Anjan Grass (Cenchrus Ciliaris) In Western India, S C. Pandeya

IGC Proceedings (1977-2023)

Cenchrus ciliaris (anjan or buffel grass) is a gregarious fodder species with high nutritive value. The species is an inhabitant of drier sandy areas throughout Africa, Canary Island, Madagascar and eastwards to India, where it mostly occurs in western parts of the country, constituting the States of Gujarat, Rajasthan, Hayana and the adjoining portions of Punjab, U ttar Pradesh and Madhya Pradesh ( called here in as Western India). In Western India, Cen­chrus ciliaris (Cc) variously dominates the nat­urally occurring grazing lands exhibiting great morphological variations with respect to habit. and spike characters. The ecoclimate of Western India is arid …

Cultivating Narratives: A Critical Discourse Analysis Of Higher Education Student-Led Farms And Gardens, Maximilan Sherard, Marc T. Sager

Publications

Despite extensive research on community agriculture, little attention has been paid to student-led farms or gardens (SFGs) in higher education contexts. SFGs represent a unique site for community agriculture due to their diverse stakeholders, academic affiliations, and the institutional policies they navigate. This study examines online promotional materials from 42 SFGs located on land-grant higher education campuses across the United States. Using critical discourse analysis, we (1) map these organizations’ practices and (2) identify competing discourses about community and agriculture within their promotional narratives. We identify and explain four core practices (membership, growing, distribution, and purpose) and connect these practices …

Unwilling Consent Or Ravishment? Sexual Violence In Late Seventeenth-Century London, Susan Hernandez

Florida Atlantic Undergraduate Research Journal

No abstract provided.

Has Plant Domestication Compromised Plant Defensive Chemistry? Aphid Induced Stress In Tomatoes, Nhi Do, Satinderpal Kaur, Minxing Zhu, Esther N. Ngumbi

MICRO-CCS student projects

Tomato plants have natural defensive mechanisms.

Direct: Phenolics are secondary metabolites that can protect the plant by intoxicating the herbivores and/or producing strong repulsive odors.

Indirect: VOCs, Volatile Organic Chemicals, are gas phase signals that attract the predators of the attacking herbivore to the plant.

Domestication of plants may chemically alter these defenses by prioritizing fruit production over defensive traits.

We hypothesize that wild/ancient tomato plants would have a greater quantity of volatiles and increased concentration of leaf total phenolics compared to cultivated tomatoes during aphid herbivory.

Screening A Random Hile Mutant Library To Characterize Hild Regulation In Salmonella, Danista Kannah, Gracious Donkor, James M. Slauch

MICRO-CCS student projects

Salmonella is a leading cause of gastrointestinal diseases globally. It utilizes a type three secretion system (T3SS) encoded on Salmonella Pathogenicity Island 1 (SPI1) to invade host intestinal epithelial cells during infection.

HilE directly regulates HilD via a direct protein-protein interaction. The Slauch lab identified two HilD variants, A141V and A141T, which are blind to HilE. These variants activate hilA expression even in the presence of HilE, indicating that the binding of HilE to these mutants is compromised.

Hypothesis: Performing random mutagenesis of hilE could lead to changes at the protein level which could compensate for the loss of interaction …

Efficacy And Evolutionary Dynamics Of 222 Nm Far-Uvc Against Vibrio Cholerae, Kadicha Madakimova, Angus Wu, Nkrumah Grant

MICRO-CCS student projects

The Far-UVC light at 222 nm wavelength (UV222) is one of the emerging methods of disinfection of bacteria in public spaces such as hospitals and labs.

• Does not penetrate human skin and does not cause harm to eyes making it a safer alternative to conventional UV systems.

• Primarily targets proteins preventing regrowth and repair pathways.

However, the potential for bacterial adaptation following sublethal UV222 exposure remains largely unknown.

Central question: How does QS transcriptional state influence the efficacy and resistance profile of V. cholerae to UV222 nm irradiation?

Hypothesis: Qurom-sensing transcriptional state determines V. cholerae susceptibility to UV222 nm UV …

The Gravity Of The Ukraine War: Measuring Conflict Impacts On European Grain Trade, Stefan Bonchis

Graduate Theses and Dissertations

This thesis investigates the heterogeneous structural disruptions caused by the war in Ukraine on the European Union’s agricultural trade architecture, focusing on three critical commodities: wheat, maize, and sunflower seeds. Employing a structural gravity model framework across all 27 EU Member States, the study evaluates two conflict episodes, the 2014 Crimea annexation and the 2022 full-scale invasion, to identify the net beneficiaries and heavily impacted nations within the EU agricultural trade network. The empirical strategy utilizes a dual-test design to capture the full scope of the disruption. Test A (Ukraine towards the EU trade) reveals a distinct geographic logic in …

Pearson Syndrome: Expanding The Clinical Spectrum Of A Mitochondrial Cytopathy-A Case Report, Alizah Faisal, Hooria Waqas, Hania Masood, Armeen Butt, Saad Rahman, Muhammad Sheraz Hameed, Syed Rafay Hussain Zaidi, Ali Iqbal, Muhammad Usama Naveed

Department of Medicine Faculty Papers

BACKGROUND: Pearson syndrome (PS) is a rare multisystem mitochondrial disorder characterized by single large-scale mitochondrial DNA deletions (SLSMDs). It typically presents in infancy with refractory sideroblastic anemia, exocrine pancreatic insufficiency, and failure to thrive. Due to its heterogeneous manifestations and resemblance to other hematological conditions, early diagnosis remains a clinical challenge.

CASE PRESENTATION: A south asian male infant presented with persistent pancytopenia, severe anemia unresponsive to intravenous and oral iron and multivitamin supplements, exocrine pancreatic insufficiency, failure to thrive, and metabolic acidosis. Born to consanguineous parents, the child had a significant family history of early infant deaths and hematological abnormalities. …

An Emergent Seafood Nationalism Takes Hold In The United States, Owen Temby

School of Earth, Environmental, & Marine Sciences Faculty Publications

This paper introduces the concept of ‘seafood nationalism’ to describe how, since 2024–2025, the United States increasingly uses tariffs, trade remedies, food safety enforcement and origin-based rules to favour American seafood over foreign products. Federal actions include Executive Order 14276, Restoring American Seafood Competitiveness, which directs agencies to address unfair trade practices, unsafe imports and to develop a coordinated seafood trade strategy. Additional measures include a tariff package imposing a 10% duty on nearly all seafood imports and 30% on seafood from China, as well as new anti-dumping and countervailing duty orders on warm-water shrimp. This paper presents Gulf …

Corn Yield And Tissue-Potassium Response To Potassium Fertilization, Wyatt A. Rongey

Graduate Theses and Dissertations

Potassium (K) deficiency is an increasingly important yield-limiting factor for irrigated corn (Zea mays L.) in Arkansas, where below optimum soil-test K (STK) acreage is increasing and visible K deficiencies or hidden K hunger threaten yield and profitability. Improving K management for modern, high-yielding hybrids require refining soil-test-based fertilizer recommendations and defining growth-stage-specific tissue-K sufficiency ranges that diagnose deficiency before irrecoverable yield loss occurs. This research aimed to i) quantify corn grain yield and yield component responses to K fertilization across a wide range of STK levels; ii) determine the frequency and magnitude of agronomically and economically meaningful yield responses …

Identifying Muscle Health Deficits Among Older Adults With And Without Cognitive Impairment, Ray Guerreros Urbina

Graduate Theses and Dissertations

Age-related declines in skeletal muscle health (SMH) and cognitive function are major contributors to disability, loss of independence, and reduced quality of life among older adults. Emerging evidence suggests that skeletal muscle and cognitive health may be interconnected through shared physiological mechanisms; however, the relationships between specific aspects of SMH and cognitive performance remain unclear. Therefore, the purpose of this study was to examine the relationships between SMH and cognitive performance among older adults and to determine whether SMH differs between cognitively healthy and cognitively impaired individuals after accounting for age and physical activity. A cross-sectional analysis was conducted using …