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Phylogenetic Relationships And Species Delimitation Of Bunchgrass Lizards Of The Genus Sceloporus From Mexico With The Description Of A New Species, Tristan Charran, Jesús A. Loc-Barragan, Rafael Alejandro Calzada-Arciniega, Liz A. Alfaro-Juantorena, Raúl Cueva Del Castillo, Christopher Blair, Víctor H. Jiménez-Arcos Apr 2025

Phylogenetic Relationships And Species Delimitation Of Bunchgrass Lizards Of The Genus Sceloporus From Mexico With The Description Of A New Species, Tristan Charran, Jesús A. Loc-Barragan, Rafael Alejandro Calzada-Arciniega, Liz A. Alfaro-Juantorena, Raúl Cueva Del Castillo, Christopher Blair, Víctor H. Jiménez-Arcos

Publications and Research

Molecular data continue to serve as an invaluable tool to assess species limits and patterns of cryptic diversity, particularly in areas harboring high levels of biodiversity. The Sceloporus scalaris group, known as bunchgrass lizards, contains 13 described and one undescribed species distributed throughout high elevation biotas of Mexico. However, recent studies suggest that diversity in the group may be substantially underestimated. We collect new sequence data from four independent loci to determine the evolutionary distinctiveness and phylogenetic relationships of an isolated population of bunchgrass lizard in the Sierra San Juan (SSJ) in the Mexican state of Nayarit. Concatenation and coalescent-based …


Dissecting The Contribution Of Stmn2 To Als Pathogenesis, Kelsey Krus Apr 2025

Dissecting The Contribution Of Stmn2 To Als Pathogenesis, Kelsey Krus

Arts & Sciences Graduate Student Theses and Dissertations

TDP-43 is required for splicing of Stathmin-2 (STMN2) transcript, so STMN2 is reduced in most ALS patients. TDP-43 does not regulate STMN2 in mice as it does in humans. Thus, mouse models of ALS do not reflect patient loss of STMN2. To test the hypothesis that a reduction in STMN2 contributes to ALS pathogenesis, we generated STMN2 knockout mice. Constitutive STMN2 loss induces an early sensory and motor neuropathy with disrupted motor behavior and dramatic distal neuromuscular junction (NMJ) denervation. This NMJ pathology occurs in fast-fatigable motor units, which are the most vulnerable in ALS. In contrast, motoneurons and axons …


Carrier Analysis Of Alc Lipid Nanoparticles With Lung Cancer Drug, Noah Sparks, Lei Xu, Hu Yang Apr 2025

Carrier Analysis Of Alc Lipid Nanoparticles With Lung Cancer Drug, Noah Sparks, Lei Xu, Hu Yang

Miners Solving for Tomorrow Research Conference

No abstract provided.


Discovering Localization Of Fun19 Orf In Yeast, Megan Percy, Galayna Baur, Katie Shannon Apr 2025

Discovering Localization Of Fun19 Orf In Yeast, Megan Percy, Galayna Baur, Katie Shannon

Miners Solving for Tomorrow Research Conference

No abstract provided.


Cytokinesis & Dbf2, Katharine Gray, Katie Shannon Apr 2025

Cytokinesis & Dbf2, Katharine Gray, Katie Shannon

Miners Solving for Tomorrow Research Conference

No abstract provided.


The Effects Of Preventing Dephosphorylation Of Iqg1 On Cytokinesis, Jenna L. Mueller, Katie Shannon Apr 2025

The Effects Of Preventing Dephosphorylation Of Iqg1 On Cytokinesis, Jenna L. Mueller, Katie Shannon

Miners Solving for Tomorrow Research Conference

No abstract provided.


Effects Of Ally Confrontation On Target Outcomes, Sophie Firle, Gemma Flores-Olivas Apr 2025

Effects Of Ally Confrontation On Target Outcomes, Sophie Firle, Gemma Flores-Olivas

Miners Solving for Tomorrow Research Conference

No abstract provided.


Characterization Of An Iqg1 Phosphorylation Mutant, Lindsay Scheider, Alexis Ham, Katie Shannon Apr 2025

Characterization Of An Iqg1 Phosphorylation Mutant, Lindsay Scheider, Alexis Ham, Katie Shannon

Miners Solving for Tomorrow Research Conference

No abstract provided.


What's That Sound?: Characterizing Chemical Signals In Bradyrhizobium Japonicum Strains, Sophia Nicolette Militante Apr 2025

What's That Sound?: Characterizing Chemical Signals In Bradyrhizobium Japonicum Strains, Sophia Nicolette Militante

Miners Solving for Tomorrow Research Conference

No abstract provided.


The Role Of Vibration Amplitude In The Escape-Hatching Response Of Red-Eyed Treefrog Embryos, Julie Jung, Michael S. Caldwell, Gregrory Mcdaniel, Karen Warkentin Apr 2025

The Role Of Vibration Amplitude In The Escape-Hatching Response Of Red-Eyed Treefrog Embryos, Julie Jung, Michael S. Caldwell, Gregrory Mcdaniel, Karen Warkentin

Biology Faculty Publications

Red-eyed treefrogs hatch early when attacked by snake or wasp egg predators. They use vibrations generated by attacks to identify these threats but other, harmless environmental disturbances also produce strong vibrations within egg clutches. This study examines the complex ways embryos use vibrations amplitude information to ensure they hatch only when a real threat is present.


Elucidating The Antibiofilm Characteristics Of A Carbon Infiltrated Carbon Nanotube Surface And A Copper-Coated Carbon Infiltrated Carbon Nanotube Surface, Lucy Christena Bowden Apr 2025

Elucidating The Antibiofilm Characteristics Of A Carbon Infiltrated Carbon Nanotube Surface And A Copper-Coated Carbon Infiltrated Carbon Nanotube Surface, Lucy Christena Bowden

Theses and Dissertations

Post-surgical implant-associated infections cause considerable patient morbidity and mortality. These infections are often caused by biofilm-forming bacteria such as Staphylococcus aureus and Pseudomonas aeruginosa. Bacterial biofilms are resistant to immune clearance and are a reservoir of antibiotic resistance. Implant materials that resist bacterial colonization may be able to improve patient outcomes. Carbon infiltrated carbon nanotubes (CICNT) are a potential surface modification for medical implants. The work presented in this dissertation focuses on characterizing the antibiofilm effect of the CICNT surface, better understanding its mechanism of action, and characterizing the enhanced antibiofilm effect of a copper-coated CICNT surface. S. aureus biofilms …


Notable Hesperiidae Collected By Kilian Roever In Arizona, Usa, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin Apr 2025

Notable Hesperiidae Collected By Kilian Roever In Arizona, Usa, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

Genomic analysis of Hesperiidae specimens collected by Kilian Roever in Arizona, USA, and deposited in the McGuire Center for Lepidoptera and Biodiversity (Florida Museum of Natural History, Gainesville, Florida, USA) confirms several published state species records, reveals that Cecropterus (Murgaria) markwalkeri Grishin, 2023, Telegonus (Telegonus) misitra (Plötz, 1881), and Epargyreus cruza Evans, 1952 have been found in Arizona with sequenced specimens representing first confirmed USA records of these three species, and allows us to discover new taxa Cecropterus (Murgaria) roeveri Grishin, sp. n. and Lerema (Lerema) ochrius occidus Grishin, ssp. n. This …


Chronic Viral Mimicry Induction Following P53 Loss Promotes Immune Evasion, Charles A Ishak, Sajid A Marhon, Naïri Tchrakian, Anjelica Hodgson, Helen Loo Yau, Isabela M Gonzaga, Melanie Peralta, Ilinca M Lungu, Stephanie Gomez, Sheng-Ben Liang, Shu Yi Shen, Raymond Chen, Jocelyn Chen, Biji Chatterjee, Kevin N Wanniarachchi, Junwoo Lee, Nicholas Zehrbach, Amir Hosseini, Parinaz Mehdipour, Siyu Sun, Alexander Solovyov, Ilias Ettayebi, Kyle E Francis, Aobo He, Taiyi Wu, Shengrui Feng, Tiago Da Silva Medina, Felipe Campos De Almeida, Jane Bayani, Jason Li, Spencer Macdonald, Yadong Wang, Sarah S Garcia, Elisa Arthofer, Noor Diab, Aneil Srivastava, Paul Tran Austin, Peter J B Sabatini, Benjamin D Greenbaum, Catherine A O'Brien, Trevor G Shepherd, Ming Sound Tsao, Katherine B Chiappinelli, Amit M Oza, Blaise A Clarke, Robert Rottapel, Stephanie Lheureux, Daniel D De Carvalho Apr 2025

Chronic Viral Mimicry Induction Following P53 Loss Promotes Immune Evasion, Charles A Ishak, Sajid A Marhon, Naïri Tchrakian, Anjelica Hodgson, Helen Loo Yau, Isabela M Gonzaga, Melanie Peralta, Ilinca M Lungu, Stephanie Gomez, Sheng-Ben Liang, Shu Yi Shen, Raymond Chen, Jocelyn Chen, Biji Chatterjee, Kevin N Wanniarachchi, Junwoo Lee, Nicholas Zehrbach, Amir Hosseini, Parinaz Mehdipour, Siyu Sun, Alexander Solovyov, Ilias Ettayebi, Kyle E Francis, Aobo He, Taiyi Wu, Shengrui Feng, Tiago Da Silva Medina, Felipe Campos De Almeida, Jane Bayani, Jason Li, Spencer Macdonald, Yadong Wang, Sarah S Garcia, Elisa Arthofer, Noor Diab, Aneil Srivastava, Paul Tran Austin, Peter J B Sabatini, Benjamin D Greenbaum, Catherine A O'Brien, Trevor G Shepherd, Ming Sound Tsao, Katherine B Chiappinelli, Amit M Oza, Blaise A Clarke, Robert Rottapel, Stephanie Lheureux, Daniel D De Carvalho

Faculty, Staff and Student Publications

Epigenetic therapies facilitate transcription of immunogenic repetitive elements that cull cancer cells through ‘viral mimicry’ responses. Paradoxically, cancer-initiating events also facilitate transcription of repetitive elements. Contributions of repetitive element transcription towards cancer initiation, and the mechanisms by which cancer cells evade lethal viral mimicry responses during tumor initiation remain poorly understood. In this report, we characterize premalignant lesions of the fallopian tube along with syngeneic epithelial ovarian cancer models to explore the earliest events of tumorigenesis following loss of the p53 tumor suppressor protein. We report that p53 loss permits transcription of immunogenic repetitive elements and chronic viral mimicry activation …


Computational Sensitivity Evaluation Of Ultrasound Neuromodulation Resolution To Brain Tissue Sound Speed With Robust Beamforming, Boqiang Fan, Wayne Goodman, Sameer A Sheth, Richard R Bouchard, Behnaam Aazhang Apr 2025

Computational Sensitivity Evaluation Of Ultrasound Neuromodulation Resolution To Brain Tissue Sound Speed With Robust Beamforming, Boqiang Fan, Wayne Goodman, Sameer A Sheth, Richard R Bouchard, Behnaam Aazhang

Faculty, Staff and Student Publications

Low-intensity focused ultrasound (LIFU) neuromodulation requires precise targeting and high resolution enabled by phased array transducers and beamforming. However, focusing optimization usually relies on phantom measurements or simulations with inaccurate acoustic properties to degrade neuromodulation resolution. Therefore, this work analyzes the sensitivity of neuromodulation resolution, measured by off-target activation area (OTAA), to brain tissue sound speed. A Robust Optimal Resolution (ROR) beamforming method is proposed to minimize the worst-case OTAA with restricted sound speed inaccuracy and propagation information estimated with deviated sound speed. The propagation estimation model utilizes equivalent source method (ESM) to map sound field between different acoustic parameter …


Identifiability And Model Selection Frameworks For Models Of High-Grade Glioma Response To Chemoradiation, Khushi C Hiremath, Kenan Atakishi, Ernesto A B F Lima, Maguy Farhat, Bikash Panthi, Holly Langshaw, Mihir D Shanker, Wasif Talpur, Sara Thrower, Jodi Goldman, Caroline Chung, Thomas E Yankeelov, David A Hormuth Ii Apr 2025

Identifiability And Model Selection Frameworks For Models Of High-Grade Glioma Response To Chemoradiation, Khushi C Hiremath, Kenan Atakishi, Ernesto A B F Lima, Maguy Farhat, Bikash Panthi, Holly Langshaw, Mihir D Shanker, Wasif Talpur, Sara Thrower, Jodi Goldman, Caroline Chung, Thomas E Yankeelov, David A Hormuth Ii

Faculty, Staff and Student Publications

We have developed a family of biology-based mathematical models of high-grade glioma (HGG), capturing the key features of tumour growth and response to chemoradiation. We now seek to quantify the accuracy of parameter estimation and determine, when given a virtual patient cohort, which model was used to generate the tumours. In this way, we systematically test both the parameter and model identifiability. Virtual patients are generated from unique growth parameters whose growth dynamics are determined by the model family. We then assessed the ability to recover model parameters and select the model used to generate the tumour. We then evaluated …


Bone-Induced Her2 Promotes Secondary Metastasis In Hr+/Her2- Breast Cancer, Rahat Alam, Anna Reva, David G Edwards, Bree M Lege, Laura S Munoz-Arcos, Carolina Reduzzi, Swarnima Singh, Xiaoxin Hao, Yi-Hsuan Wu, Zeru Tian, Laura M Natalee, Gargi Damle, Deniz Demircioglu, Yixian Wang, Ling Wu, Elisabetta Molteni, Dan Hasson, Bora Lim, Zbigniew Gugala, Jerry E Chipuk, Julie E Lang, Joseph A Sparano, Chonghui Cheng, Massimo Cristofanilli, Han Xiao, Xiang H-F Zhang, Igor L Bado Apr 2025

Bone-Induced Her2 Promotes Secondary Metastasis In Hr+/Her2- Breast Cancer, Rahat Alam, Anna Reva, David G Edwards, Bree M Lege, Laura S Munoz-Arcos, Carolina Reduzzi, Swarnima Singh, Xiaoxin Hao, Yi-Hsuan Wu, Zeru Tian, Laura M Natalee, Gargi Damle, Deniz Demircioglu, Yixian Wang, Ling Wu, Elisabetta Molteni, Dan Hasson, Bora Lim, Zbigniew Gugala, Jerry E Chipuk, Julie E Lang, Joseph A Sparano, Chonghui Cheng, Massimo Cristofanilli, Han Xiao, Xiang H-F Zhang, Igor L Bado

Faculty, Staff and Students Publications

Bone metastases can disseminate to secondary sites and promote breast cancer progression creating additional clinical challenges. The mechanisms contributing to secondary metastasis are barely understood. Here, we evaluate the prediction power of Her2-expressing (Her2E) circulating tumor cells (CTCs) after analyzing over 13,000 CTCs from a cohort of 137 metastatic breast cancer (MBC) patients with initial HR+/Her2− status and employ preclinical models of bone metastasis (BM) to validate the role of Her2E CTCs in multi-organ metastases. While Her2 expression was higher in patients with bone metastasis, experimental analyses revealed that Her2E CTCs derived from bone lesions were more dependent on Her2 …


Metabolic Transitions In Embryos Of Artemia Franciscana: Regulation And Consequences For Oxidative Stress, Daniel Anthony Arabie Apr 2025

Metabolic Transitions In Embryos Of Artemia Franciscana: Regulation And Consequences For Oxidative Stress, Daniel Anthony Arabie

LSU Doctoral Dissertations

Embryos of Artemia franciscana survive harsh conditions in diapause and anoxia-induced quiescence for years by undergoing deep metabolic transitions. I investigated the relationship between phosphorylation of pyruvate dehydrogenase (PDH) and carbon flux to the tricarboxylic acid (TCA) cycle during metabolic depression. The difference in catalytic activity of the PDH complex (PDC) in maximally phosphorylated and dephosphorylated samples was 16.5-fold. Western blot analysis confirmed the changes in phosphorylation of PDH. Analysis of PDH expression in diapause and post-diapause embryos via phospho-PDH showed no significant differences. Investigation of post-diapause embryos under anoxia showed that phosphorylation of PDH decreased and activated the enzyme. …


The First Record Of Alpiscorpius Idaeus (Yağmur & Tropea, 2017), Comb. N. From The Lesvos Island, Greece (Scorpiones: Euscorpiidae), Ersen A. Yağmur, Özgün Sipahioğlu Apr 2025

The First Record Of Alpiscorpius Idaeus (Yağmur & Tropea, 2017), Comb. N. From The Lesvos Island, Greece (Scorpiones: Euscorpiidae), Ersen A. Yağmur, Özgün Sipahioğlu

Euscorpius

The scorpion species Euscorpius idaeus Yağmur & Tropea, 2017, previously known from Mount Kazdağı in the Balıkesir and Çanakkale Provinces of Turkey, is reported for the first time from the Lesvos Island, Greece. In this study, it is transferred to the genus Alpiscorpius Gantenbein et al., 1999. Detailed illustrations of Alpiscorpius idaeus (Yağmur & Tropea, 2017), comb. n. from the Lesvos Island population are provided.


Inactivation Of E. Faecium Nrrl B-2354 In Whole Black Pepper By Fluidization With Hydrogen Peroxide Vapor, Daniela Segura Apr 2025

Inactivation Of E. Faecium Nrrl B-2354 In Whole Black Pepper By Fluidization With Hydrogen Peroxide Vapor, Daniela Segura

Department of Food Science and Technology: Master of Science with Project Option

This study evaluated Enterococcus faecium NRRL B-2354 as a surrogate for Salmonella inactivation in black peppercorns treated with hydrogen peroxide (HP) vapor via fluidization. The selected parameter for dwell temperature was 60ºC for 60 minutes. The reduction of both Salmonella and E. faecium, along with changes in water activity, color, and residual hydrogen peroxide, were measured before, immediately after treatment and at 24 and 48 hours post-treatment. Results showed that E. faecium exhibited a significantly greater reduction (4.63 ± 0.55 log CFU/g) compared to Salmonella (2.94 ± 0.16 log CFU/g) (p < 0.05), making E. faecium unsuitable as …


Evaluating The Effects Of Nf1 Mimetic Peptides On Cell Viability And Downstream Signaling Pathways - Continued Research, Grant L. Davis, Matthew C T Hartman, Jian Liu, Hui Lui, Deeann Wallis Apr 2025

Evaluating The Effects Of Nf1 Mimetic Peptides On Cell Viability And Downstream Signaling Pathways - Continued Research, Grant L. Davis, Matthew C T Hartman, Jian Liu, Hui Lui, Deeann Wallis

Expo Student Presentations

2025 Spring Expo Poster Presentation

Combining Checkpoint Therapy And Il-6 Receptor Inhibition In Non-Small Cell Lung Cancer, Sruti Sivan, Joel L. Berry, Aakash Desai, James M. Donahue, Jessy S. Deshane, Kayla F. Goliwas Apr 2025

Combining Checkpoint Therapy And Il-6 Receptor Inhibition In Non-Small Cell Lung Cancer, Sruti Sivan, Joel L. Berry, Aakash Desai, James M. Donahue, Jessy S. Deshane, Kayla F. Goliwas

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences


Rapid Serial Visual Task Assessment Performance In Response To Training In A Central Vision Loss Model, Hrinmai Manikandan Apr 2025

Rapid Serial Visual Task Assessment Performance In Response To Training In A Central Vision Loss Model, Hrinmai Manikandan

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences
  • Health Sciences & Health Professions


Comparing Extenders For Cryopreservation Of Sperm From The Sea Urchin, Lytechinus Variegatus, Gus Roveri, Katie Gibbs Apr 2025

Comparing Extenders For Cryopreservation Of Sperm From The Sea Urchin, Lytechinus Variegatus, Gus Roveri, Katie Gibbs

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences


The Role Of Moonlighting Proteins In Life Through Viewing A Synthetic Mycoplasma Species, Anthony Wheeler, James Daubenspeck, Prescott Atkinson Apr 2025

The Role Of Moonlighting Proteins In Life Through Viewing A Synthetic Mycoplasma Species, Anthony Wheeler, James Daubenspeck, Prescott Atkinson

Expo Student Presentations

2025 Spring Expo Oral Presentation

  • Biological & Life Sciences
  • Works in Progress


Reducing The Flash-Lag Effect Through Visual Rehearsal: Implications For Visual Training In Athletes, Matthew Streitman, Mark Bolding Apr 2025

Reducing The Flash-Lag Effect Through Visual Rehearsal: Implications For Visual Training In Athletes, Matthew Streitman, Mark Bolding

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences


Age Related Variations In Blood Vessel Vascularity And Collagen Deposition In Mice Ovarian Tumors, Khushi Sureja, Asha Kumari, Mehri Monavarian, Liz Quientero-Macias, Karthikeyan Mythreye Apr 2025

Age Related Variations In Blood Vessel Vascularity And Collagen Deposition In Mice Ovarian Tumors, Khushi Sureja, Asha Kumari, Mehri Monavarian, Liz Quientero-Macias, Karthikeyan Mythreye

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences


Impact Of O-Glcnacylation Elevation On Mitophagy In Astrocytes Within The Dentate Gyrus, Eric Rohwer, Joshua Kramer, John C. Chatham, Martin E. Young, Victor Darley-Usmar, Jianhu Zhang Apr 2025

Impact Of O-Glcnacylation Elevation On Mitophagy In Astrocytes Within The Dentate Gyrus, Eric Rohwer, Joshua Kramer, John C. Chatham, Martin E. Young, Victor Darley-Usmar, Jianhu Zhang

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences
  • Works in Progress


Serine/Glycine Pathway In Skeletal Muscle Regeneration In Duchenne Muscular Dystrophy, Dhanya Vadlapati, Ryan S. Dannemiller, Matt Alexander, Anna E. Thalacker-Mercer Apr 2025

Serine/Glycine Pathway In Skeletal Muscle Regeneration In Duchenne Muscular Dystrophy, Dhanya Vadlapati, Ryan S. Dannemiller, Matt Alexander, Anna E. Thalacker-Mercer

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences


Stress-Induced Neural Activity In The Pvt And Its Role In Binge Eating Behavior, Julia Tucker, Sierra Miller, Lauren Assaf, Sofia Beas Apr 2025

Stress-Induced Neural Activity In The Pvt And Its Role In Binge Eating Behavior, Julia Tucker, Sierra Miller, Lauren Assaf, Sofia Beas

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences


Structural Basis For Hiv-1 Gag Assembly And Ma Maturation, Bao Pham, Eric Freed, Ruba H. Ghanam, Theo Hines, Jamil Saad Apr 2025

Structural Basis For Hiv-1 Gag Assembly And Ma Maturation, Bao Pham, Eric Freed, Ruba H. Ghanam, Theo Hines, Jamil Saad

Expo Student Presentations

2025 Spring Expo Poster Presentation

  • Biological & Life Sciences