Digital Commons Network^™

Perianth Evolution And Implications For Generic Delimitation In The Eucalypts (Myrtaceae), Including The Description Of The New Genus, Blakella, Michael D. Crisp, Bui Q. Minh, Bokyung Choi, Robert D. Edwards, James Hereward, Carsten Kulheim, Yen Po Lin, Karen Meusemann, Andrew H. Thornhill, Alicia Toon, Lyn G. Cook

Michigan Tech Publications

Eucalypts (Myrtaceae tribe Eucalypteae) are currently placed in seven genera. Traditionally, Eucalyptus was defined by its operculum, but when phylogenies placed Angophora, with free sepals and petals, as sister to the operculate bloodwood eucalypts, the latter were segregated into a new genus, Corymbia. Yet, generic delimitation in the tribe Eucalypteae remains uncertain. Here, we address these problems using phylogenetic analysis with the largest molecular data set to date. We captured 101 low-copy nuclear exons from 392 samples representing 266 species. Our phylogenetic analysis used maximum likelihood (IQtree) and multispecies coalescent (Astral). At two nodes critical to generic delimitation, we tested …

The Future Of Clovers In Forage Systems And As Cover Crops, J. H. Bouton, John R. Caradus

IGC Proceedings (1977-2023)

Clovers (Trifolium spp.) are the most widely used genera of legumes in forage systems, although only a limited number of the hundreds of perennial and annual species are commercially available. The number of varieties available within each of the main commercial species can be high and demonstrates past breeding achievements. Success relates to any clover’s ability to persist in mixtures with other forage species, across a range of soil types, management systems, and climates, while providing animal nutrition and biologically fixed nitrogen benefits. Uses range from traditional pasture mixtures with grasses to inclusion in multi-species mixtures, and as cover …

Modelling Leucaena Biomass Under Rainfed Production Systems Of Semiarid Regions, M. J. D. Cândido, J. L. G. Santos, A. C. R. Cavalcante, S. R. Maranhão, M. A. Santos, J. M. Osorio Leyton

IGC Proceedings (1977-2023)

The climatic variability of semiarid regions is the main source of uncertainties associated with forage and animal production, indicating a need for tools that accurately estimate forage production in order to construct a forage budgeting plan for livestock. This study simulated the biomass of Leucaena (Leucaena leucocephala) using the PHYGROW model in four locations located in Brazilian Semiarid. The work was carried out based on field data collected from 2019 to 2021. After sowing in 2018, leucaena was harvested when it reached 200 cm and to a target residual height of 70 cm. The biomass (fresh matter) was …

An Empirical Investigation Of Online Grocery Shopping Behaviors Based On Different Generations, Jung-Im Seo

Faculty Publications

The Coronavirus 19 (COVID-19) pandemic has significantly impacted on consumers’ grocery shopping habits and lifestyles. Online grocery shopping is one of the promising ways to have little contact as well as increase convenience. For this reason, the sales and revenues of online grocery shopping have been dramatically increasing during the pandemic. The purpose of this study to explore online grocery shopping behaviors of different generations and their shopping intentions toward online grocery shopping during and after the pandemic. Data were collected from Amazon Mechanical Turk (MTurk) and Southeast region in U.S.A with convenience sample. All Generations know that online grocery …

A New Species From Türkiye, Centaurea Turhanii (Cardueae, Asteraceae), Tuna Uysal, Meryem Bozkurt, Ergi̇n Hamzaoğlu

Turkish Journal of Botany

In this article, a new cornflower, Centaurea turhanii Uysal & Hamzaoğlu (Asteraceae) from Türkiye was described and reported. Morphological, karyological, and molecular analyses were used to reveal the taxonomic status of the new species with the species thought to be related to taxa. A modified determination key was submitted and its ecology and phenology were given.

Turtle Species And Ecology Drive Carapace Microbiome Diversity In Three Seasonally Interconnected Wetland Habitats, Matthew Parks, Jun Sheng Lee, Kassandra Camua, Ethan Hollender

Biological Sciences Faculty Publications and Presentations

Different species of freshwater turtles exhibit primary behaviours ranging from aerial basking to benthic bottom-walking, cycle between wet and dry conditions at different time intervals, and undertake short-distance overland movements between aquatic habitats. These behaviours in turn may impact the accumulation of microbes on external shell surfaces of turtles and provide novel niches for differentiation of microbial communities. We assessed microbial diversity using 16S and 18S rRNA metabarcoding on carapace surfaces of six species of freshwater turtles residing in three adjacent and seasonally interconnected wetland habitats in southeast Oklahoma (United States). Communities were highly diverse, with nearly 4200 prokaryotic and …

Toward Standardization, Harmonization, And Integration Of Social Determinants Of Health Data: A Texas Clinical And Translational Science Award Institutions Collaboration, Catherine K Craven, Linda Highfield, Mujeeb Basit, Elmer V Bernstam, Byeong Yeob Choi, Robert L Ferrer, Jonathan A Gelfond, Sandi L Pruitt, Vaishnavi Kannan, Paula K Shireman, Heidi Spratt, Kayla J Torres Morales, Chen-Pin Wang, Zhan Wang, Meredith N Zozus, Edward C Sankary, Susanne Schmidt

Faculty, Staff and Student Publications

INTRODUCTION: The focus on social determinants of health (SDOH) and their impact on health outcomes is evident in U.S. federal actions by Centers for Medicare & Medicaid Services and Office of National Coordinator for Health Information Technology. The disproportionate impact of COVID-19 on minorities and communities of color heightened awareness of health inequities and the need for more robust SDOH data collection. Four Clinical and Translational Science Award (CTSA) hubs comprising the Texas Regional CTSA Consortium (TRCC) undertook an inventory to understand what contextual-level SDOH datasets are offered centrally and which individual-level SDOH are collected in structured fields in each …

Gene Flow And Isolation In The Arid Nearctic Revealed By Genomic Analyses Of Desert Spiny Lizards, Carlos J. Pavón-Vázquez, Qaantah Rana, Keaka Farleigh, Erika Crispo, Mimi Zeng, Jeevanie Liliah, Daniel Mulcahy, Alfredo Ascanio, Tereza Jezkova, Adam D. Leaché, Tomas Flouri, Ziheng Yang, Christopher Blair

Publications and Research

The opposing forces of gene flow and isolation are two major processes shaping genetic diversity. Understanding how these vary across space and time is necessary to identify the environmental features that promote diversification. The detection of considerable geographic structure in taxa from the arid Nearctic has prompted research into the drivers of isolation in the region. Several geographic features have been proposed as barriers to gene flow, including the Colorado River, Western Continental Divide, and a hypothetical Mid-Peninsular Seaway in Baja California. However, recent studies suggest that the role of barriers in genetic differentiation may have been overestimated when compared …

Coral Cover Percentage And Health Condition In Tioman Island Marine Protected Area, Pahang, Malaysia, Nur Addawiah Mohamad Rodzi, Mohamed Fahmy Yusof, Zaidi Che Cob

Turkish Journal of Zoology

Continuous evaluation and monitoring of coral percentage cover and health status is critical for enhancing coral reef resilience management. The present study aimed to determine the coverage and coral status at important sites of Tioman Island Marine Park, which include Renggis Island, Tiong Point and Tekek. Surveillance video recording and in situ observation were carried out using the Coral Video Transect (CVT) method, which were analyzed using the Coral Point Count with Excel extension (CPCe) software. The overall health status for the study area was considered as “fair” with 41.61% ± 4.46% of mean live coral coverage. Among the stations …

Experiences Of Family Communication And Cascade Genetic Testing For Hereditary Cancer In Medically Underserved Populations-A Qualitative Study, Erica M Bednar, J Alejandro Rauh-Hain, Jose J Garcia, Norma De Aguinaga, Mary Anne Powell, Sylvia L Peral, Roni Nitecki, Kirsten Jorgensen, Natasha L Rudy, Karen H Lu, Charles A Leath, Isabel C Scarinci

Faculty, Staff and Student Publications

UNLABELLED: We sought to explore the intrafamilial communication and cascade genetic testing (CGT) experiences of patients with hereditary cancer from diverse, medically underserved populations and their relatives. Participants included patients receiving oncology care at an urban, safety net hospital in Texas or comprehensive cancer center in Alabama and their first-degree relatives. In-depth semi-structured qualitative interviews were completed wherein patients shared their experiences with genetic counseling (GC), genetic testing (GT), and communicating their results to relatives. Relatives shared their experiences receiving information from the patient and considering CGT. Interviews were transcribed, coded, and themes were identified. Of 25 participating patients, most …

Impact Of Opioid-Free Analgesia On Pain Severity And Patient Satisfaction After Discharge From Surgery: Multispecialty, Prospective Cohort Study In 25 Countries, Tasman Collaborative

Faculty, Staff and Student Publications

BACKGROUND: Balancing opioid stewardship and the need for adequate analgesia following discharge after surgery is challenging. This study aimed to compare the outcomes for patients discharged with opioid versus opioid-free analgesia after common surgical procedures.

METHODS: This international, multicentre, prospective cohort study collected data from patients undergoing common acute and elective general surgical, urological, gynaecological, and orthopaedic procedures. The primary outcomes were patient-reported time in severe pain measured on a numerical analogue scale from 0 to 100% and patient-reported satisfaction with pain relief during the first week following discharge. Data were collected by in-hospital chart review and patient telephone interview …

An Evolutionary Perspective On Complex Neuropsychiatric Disease, Jon M Mcclellan, Anthony W Zoghbi, Joseph D Buxbaum, Carolina Cappi, James J Crowley, Jonathan Flint, Dorothy E Grice, Suleyman Gulsuner, Conrad Iyegbe, Sanjeev Jain, Po-Hsiu Kuo, Maria Claudia Lattig, Maria Rita Passos-Bueno, Meera Purushottam, Dan J Stein, Anna B Sunshine, Ezra S Susser, Christopher A Walsh, Olivia Wootton, Mary-Claire King

Faculty, Staff and Students Publications

The forces of evolution-mutation, selection, migration, and genetic drift-shape the genetic architecture of human traits, including the genetic architecture of complex neuropsychiatric illnesses. Studying these illnesses in populations that are diverse in genetic ancestry, historical demography, and cultural history can reveal how evolutionary forces have guided adaptation over time and place. A fundamental truth of shared human biology is that an allele responsible for a disease in anyone, anywhere, reveals a gene critical to the normal biology underlying that condition in everyone, everywhere. Understanding the genetic causes of neuropsychiatric disease in the widest possible range of human populations thus yields …

The Long-Term Effects Of Prescribed Fire On Floral Abundance And Bumble Bee Abundance In Mixed-Oak Forests Of Southeastern Ohio, Moses Shafer

Theses, Dissertations and Capstones

Pollinators are declining due to climate change and habitat loss driven by agriculture and urbanization. In fire-adapted ecosystems, fire promotes the biodiversity of plants by creating space, reducing competition, and increasing light and nutrient availability. However, little is known regarding the effects of fire on floral abundance of plants used by Bombus. The overall goal of this project was to assess the long-term effects of fire on floral abundance and Bombus abundance. Our specific questions were: (1) How does fire frequency influence floral abundance?, (2) How does fire frequency influence floral abundance of species specifically utilized by bumble bees?, …

An Automated On-The-Go Unloading System Reduces Harvest Operator Stress Relative To Manual Operation, Travis A. Burgers, Kusha Kamarei, Mukund Vora, Matthew Horne

Mechanical Engineering Faculty Publications

On-the-go unloading improves harvest operational efficiency, but it requires skilled labor because it is challenging and stressful to balance numerous concurrent tasks. Harvest automation reduces workload, stress, and fatigue. The objective of this study was to determine if using a commercially available, automated on-the-go unloading system (Raven Cart Automation TM , RCA, Raven Industries) would reduce operator stress com- pared to manual operation. Nine grain cart tractor operators and six combine operators participated in this study. Operators performed their typical harvest operation, except to alternate on-the-go unloading using RCA or operating manually. Skin conductance (elec- trodermal activity) was measured with …

Be Careful What You Wish For: An Overreliance On Telemedicine Could Harm Health Equity, Chinelo Diké-Minor

Annals of Health Law and Life Sciences

No abstract provided.

Species Distribution Modelling Using Bioclimatic Variables On Critically Endangered Endemic Species (Macrocephalon Maleo) In Sulawesi, Septianto Aldiansyah, Khalil Abdul Wahid

ASEAN Journal on Science and Technology for Development

The island of Sulawesi isolates migratory fauna from Asia and Australia and creates animal combinations such as the Maleo (Macrocephalon Maleo). The Maleo population is experiencing a downward trend due to habitat fragmentation, deforestation and threats by humans. This study aims to model the potential distribution of Maleo using several famous current and future models as a result of climate change throughout the island of Sulawesi, not only in its natural habitat, but beyond its natural habitat. Bioclimatic variables and in situ attendance data were used in this study. The method used is Maximum Entropy by evaluating the GLM, SVM …

Ms Environmental Biology Capstone Project, Reilly Miller

Regis University Student Publications (comprehensive collection)

Habitat loss due to deforestation is a primary threat to global biodiversity. Clearing tropical rainforests for agriculture leads to forest fragmentation. Forest fragments contain fewer large trees and provide lower food availability for primates compared to continuous forests. Mantled howler monkeys inhabit the increasingly fragmented rainforests of Central and South America and may need to alter their activity and spatial cohesion to mitigate competition and preserve energy in fragments where there is lower quality food. We compared howler monkey activity and spatial cohesion across a small forest fragment (La Suerte Biological Research Station, LSBRS) and a large, continuous forest (La …

The Friendliest Bradyrhizobia - The Spectrum Of Partner Quality Amongst Soybean's Symbiont, Adam Zwawi, Katy Heath, Amanda Griffin

MICRO-CCS student projects

No abstract provided.

Environmental Biology Masters Capstone, Antonio Gonzalez-Pita

Regis University Student Publications (comprehensive collection)

Human wildlife interactions (HWI) pose a complex challenge for wildlife managers. Human encroachment into wildlife habitat and the growing number of outdoor recreationists are increasing the frequency of contact and conflict, especially in regions such as the Front Range of Colorado. Geographic information systems (GIS), which use a combination of remote sensing and environmental survey data, allow for predictive spatial analyses of where human wildlife interactions are likely to occur. I used publicly reported observations of moose to create spatial predictive maps in a species distribution model framework. Slope and elevation were shown to be the strongest predictors of HWI, …

Site-Specific Space Use And Resource Selection By Black Vultures (Coragyps Atratus) In The Southeastern Usa, Betsy Evans, John S. Humphrey, Eric A. Tillman, Michael L. Avery, Bryan M. Kluever

United States Department of Agriculture Wildlife Services: Staff Publications

North American populations of Black Vultures Coragyps atratus have increased and expanded their distribution in the southern and eastern USA. In conjunction with these patterns has been a rise in human–vulture conflicts. To improve our understanding of space use patterns and better inform management, we evaluated the movements of Black Vultures (n = 23) in the southeastern USA using a long-term GPS tracking database. Our specific objectives were to: (1) quantify home-range sizes in relation to season and geographical study location and (2) examine within-home-range resource selection to identify landscape and anthropogenic factors influencing roost and diurnal space use. …

Characterizing Feral Swine Movement Across The Contiguous United States Using Neural Networks And Genetic Data, Rachael M. Giglio, Courtney F. Bowden, Ryan K. Brook, Antoinette J. Piaggio, Timothy J. Smyser

United States Department of Agriculture Wildlife Services: Staff Publications

Globalization has led to the frequent movement of species out of their native habitat. Some of these species become highly invasive and capable of profoundly altering invaded ecosystems. Feral swine (Sus scrofa × domesticus) are recognized as being among the most destructive invasive species, with populations established on all continents except Antarctica. Within the United States (US), feral swine are responsible for extensive crop damage, the destruction of native ecosystems, and the spread of disease. Purposeful human-mediated movement of feral swine has contributed to their rapid range expansion over the past 30 years. Patterns of deliberate introduction of …

Bayesian Integrated Species Distribution Models For Hierarchical Resource Selection By A Soaring Bird, Ryo Ogawa, Guiming Wang, L. Wes Burger, Bronson Strickland, J. Brian Davis, Fred L. Cunningham

United States Department of Agriculture Wildlife Services: Staff Publications

Migratory birds exhibit seasonal geographic range (hereafter, range) dynamics during the annual cycle. Few studies have examined how migratory birds select their habitats for range occupancy at the species level and space use at the individual level simultaneously. We hypothesized that environmental variables directly related to fitness components would affect the range occupancy probabilities of migrants, whereas environment variables related to movements and flights would affect the space use intensities of migrants. We built Bayesian integrated species distribution models (ISDMs) to evaluate the effects of climate conditions, wind conditions, and landcover compositions on the seasonal range dynamics of American white …

Proceedings Of The 51st Annual Meeting, Southern Soybean Disease Workers (March 6-7, 2024, Pensacola Beach, Florida), Ian Small, Kiersten A. Wise, Travis R. Faske, Danise Beadle, Paul Patrick Price Iii, Tom W. Allen

Southern Soybean Disease Workers: Conference Proceedings

Success in Extension (moderator: Kiersten Wise)

Institutional currency: What is important at your university? Loren Giesler

Success (and challenges) in extension in the Mid-West, Daren Mueller

Success in extension in the Mid-Atlantic, Alyssa Koehler

Success (and failures) in xxtension in the Southeast, Ed Sikora

Success in extension in the Mid-South, Travis Faske

Student Competition (moderator: Ian Small)

Hiding in plain sight: Disentangling the biology of Cercospora species associated with Cercospora leaf blight of soybean, Ernesto da Silva, J. Searight, J. Richards, P. Price, and V. Doyle

Using spore traps to decipher the epidemiology of Cercospora leaf blight in the mid-south, …

Exploring Long-Term Patterns: Black Bass Tournament Fishery And Population Trends In West Virginia's Navigable Rivers, Alex J. Benecke

Graduate Theses, Dissertations, and Problem Reports (ETD)

Black bass Micropterus spp. are popular sport fish in West Virginia’s navigable rivers. In recent years, anglers have expressed concerns about a potential decline in fishery quality. To investigate these claims, we evaluated whether fishery quality has declined compared to earlier periods and whether population trends correspond to angler catch rates. Specifically, we aimed to (1) examine changes in species catch over time and during key periods, such as tournament and spawning seasons; (2) describe the distribution of black bass species across pools and habitat types; and (3) assess the outcomes of previous stocking efforts. To address these objectives, we …

Dietary Folate Regulates Organismal Growth And Longevity, Aiman Shahab

Wayne State University Dissertations

Folate (Vitamin B9) is an essential cofactor in one-carbon transfer reactions. It is involved in multiple critical processes including DNA synthesis, DNA methylation, protein synthesis and antioxidant defense mechanisms. Inadequate intake and availability of folate is a known risk factor for several diseases. The effect of folate deficiency in causing adverse health outcome is well documented. Recently, excess folate exposure has been associated with deleterious effects on health in humans and animal models. However, the underlying mechanisms involved in mediating such effects are poorly understood, requiring extensive investigations. This work was conducted to understand the effect of excess folate on …

Temporal Distribution Of Potential Waterborne Pathogens In Sequiota Spring, William J. Durstock

Graduate Theses/Dissertations

Waterborne pathogens from human fecal matter pose a significant health risk in karst environments, where domestic wastewater can easily be transferred to the shallow groundwater system via old, leaky septic tanks and damaged sewer lines. This study monitored fecal indicator bacteria (FIB) and potential pathogens in Sequiota Spring located in the karst region of southwest Missouri, using Microbial Source Tracking (MST) and Illumina DNA sequencing of bacterial 16S rRNA genes. MST identified high levels of human fecal indicator bacteria (HFIB) (up to 110,000 cells/L) in July 2020. By June 2022, HFIB levels had dropped significantly (55-fold reduction) after the City …

Regional And Landscape Scale Examination And Attribution Of Vegetation Changes To Social-Environmental System Drivers In Kazakhstan, Venkatesh Kolluru

Dissertations and Theses

Kazakhstan (KZ) experienced widespread changes in ecosystem structure and function. The country is a climate and land cover/use change “hotspot” owing to political reforms, intensified grazing, and extreme climatic events. Despite their importance, there is a lack of consensus about vegetation changes, trends, and drivers in KZ. Addressing this knowledge gap is crucial for effectively managing and restoring grassland ecosystems. However, a pressing challenge is discerning anthropogenic-driven vegetation changes from climate variability and decomposing the responses to the complex human-environmental forcings. Motivated by these challenges, I employed statistical and machine learning algorithms to detect and attribute vegetation changes to social-environmental …

Thematic Mapping Of Apidae Holdings Within The University Of Arkansas Arthropod Museum, Baylie L. Day, Ashley P.G. Dowling, Austin Jones

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Museum biological collections store species data that can be utilized in research on biodiversity, environmental change, invasive species, public health, and disease. The University of Arkansas Arthropod Museum, which began in 1905, houses over 750,000 specimens and has not yet been digitized. Making data publicly accessible via the internet makes the data available to the entire scientific community. The goal of this project was to create a digital resource to allow greater access to the University of Arkansas Arthropod Museum holdings. To do so, data from Bombus (bumble bee) and Xylocopa (carpenter bee) specimens were entered into a database in …

A Vascular Flora Of The Southern Inyo Mountains, Inyo County, California, Maria J. Jesus

Aliso: A Journal of Systematic and Floristic Botany

The Inyo Mountains in Inyo County, California, are an arid mountain range located between the eastern Sierra Nevada and Death Valley National Park. The study site is ca. 433 km² (167 sq mi), ranging in elevation from 549 to 2955 m (1800 to 9694 ft), and comprises the southern extent of the Inyo Mountains where the Great Basin Desert and Mojave Desert bioregions meet. This area had been poorly represented by botanical collections despite an abundance of distinctive biogeographic features and high diversity in rare and endemic plant species. The objectives of this study were to complete a specimen-based, …

Pedestrianization Al- Azhar Street As A Method To Preserve The Urban Fabric Of The Historic Cairo, Ahmed Mohammed Emam Hammad

Mansoura Engineering Journal

The public urban open space is the container that contain human activities, expressing their vitality and distinctive identity. It facilitates various functions, such as providing accessibility to buildings, natural lighting, ventilation, and creating an urban environment (social, urban, and economic). Therefore, it is considered one of the most important components of the urban fabric of any region. Its importance and value increase in heritage and historical areas, where it is regarded as a tangible heritage no less significant than the valuable buildings found in those areas.

Hence, it should receive popular and official attention over time, and its character and …