Digital Commons Network^™

Above And Belowground Biomass Of A Multidecadal Restored Tallgrass Prairie Chronosequence And Its Influence On Soil Carbon Dynamics, Adam John Bauer

Graduate Research Theses & Dissertations

Evidence supports the idea that tallgrass prairie restoration has the potential to sequester carbon, but the influences of site age and quality on restored tallgrass prairie carbon dynamics are not well known. This dissertation characterizes a multidecadal tallgrass prairie chronosequence and evaluates the influence of both restoration quality and time since restoration on biomass and soil carbon dynamics using both remotely sensed and field data collected from Nachusa Grasslands tallgrass prairie restorations. It also expands on the traditional aspatial analyses using geographically weighted data to examine the spatiotemporal variation in environmental variables that influence restored tall grass prairie carbon dynamics. …

“Fixing” Settler Capitalism: Un/Sustainability In The Former Fort Ord, Clare M. Beer, Sara Salazar Hughes

Urban and Environmental Studies Faculty Works

California's former Fort Ord Army Base is located on the unceded Indigenous territory of the Ohlone Costanoan Esselen Nation. After seven decades as a training ground for foreign wars, the decommissioning of the base triggered an economic, demographic, and cultural crisis for greater Monterey. The solution to this crisis, the Fort Ord Base Reuse Plan, promised sustainable development in the form of local environmental protection, public higher education, and economic growth. We argue that the Fort Ord Base Reuse Plan illustrates a settler sustainability fix, which the state deploys to secure settler capitalist futurity on the Monterey Peninsula at the …

Ecological Interactions Of Large Mammals In Luangwa, Zambia, Jahzara Osborne, Amelia Villaseñor

2025 Research Poster Competition

"The connection between mammalian behavior in national parks and human-driven environmental change is tenuous. National parks are often considered the last vestiges of natural space, yet they are created and maintained by humans. South Luangwa National Park (SLNP) within the southern East African Rift is a microcosm of this global conundrum and is also a region where stable isotope data is sparce. Understanding the mammalian diets of mammals in the SLNP via carbon and oxygen stable isotopes in teeth will provide a means of understanding variation in one aspect of mammal behavior that may be affected by changing animal-human relationships. …

Characterization Of Multispecies Microbial Communities At Beef And Pork Processing Plants And Their Impact On Pathogen Stress Tolerance, Rong Wang, Sapna Chitlapilly Dass, Vignesh Palanisamy, You Zhou, Tatum Katz, Joseph M. Bosilevac

Nebraska Center for Biotechnology: Faculty and Staff Publications

Escherichia coli O157:H7 and Salmonella enterica are major foodborne pathogens. Biofilm formation may potentially contribute to product contamination by these pathogens at meat processing facilities. Further, pathogen stress tolerance may vary significantly due to the interactions with the multispecies microbial community at meat plants, which may be affected by processing activity, animal species, and the local selective pressure caused by sanitization practices.

We characterized natural microorganisms collected from floor drains at various areas at three beef plants and two pork plants and analyzed their impact on pathogen sanitizer tolerance.

The pathogen strains were able to integrate efficiently into the multispecies …

Thermokarst Can Stimulate Tall Shrub Productivity And Plant-Soil Feedbacks In The Low-Arctic Tundra, Claire O'Brien

Theses and Dissertations (Comprehensive)

Warming temperatures are exacerbating permafrost thaw disturbances in the Arctic. Permafrost thaw disturbances are facilitating tall, deciduous shrub expansion. However, potential productivity differences between shrubs that colonize disturbed areas and those in undisturbed tundra remain understudied. More productive shrubs optimize for fast growth over leaf longevity, meaning they may produce more abundant and higher quality litter which could accelerate decomposition rates and lead to faster nutrient cycling. Faster nutrient cycling could create a positive feedback loop between shrubs and soil, maintaining greater ecosystem productivity. I measured in situ soil characteristics and physiological and structural shrub functional traits for green alder …

Edge Effects Impact Blue Carbon Dynamics Across Coastal Ecotones In A Tropical Seascape, Erik S. Yando, Jahson B. Alemu I, Kiah Eng Lim, Taylor M. Sloey, Michiel Van Breugel, Natasha Bhatia, Daniel A. Friess

Biological Sciences Faculty Publications

Coastal wetlands are important for their ability to regulate global climate through the sequestration and long-term storage of carbon. Accurate quantification of ecosystem-specific carbon dynamics (including sequestration, storage, and fluxes) is needed to develop accurate carbon budgets that inform climate change mitigation. Most work to quantify carbon dynamics either use subsampling in core habitats or benefit transfers to upscale values. While these approaches are valuable, our understanding of carbon dynamics across ecosystem transitions and overall heterogeneity remains a critical gap in coastal ecosystems as boundaries are not always clear. In this study, we established transects across both mangrove and seagrass …

Operational Risk Evaluation Of Oil Tankers Via Multivariate Gaidai Reliability Framework Incorporating Memory Effects, Oleg Gaidai, Shicheng He, Jinlu Sheng, Yan Zhu, Alaa Elsayed, Mahmoud El-Wazery

Journal of Marine Science and Technology–Taiwan

The retreat of Arctic Sea ice may exert a major impact on economy，potentially transforming the nature of commerce between Asia, Europe, and the Americas. Projections indicate a 40% reduction in transit distance and a 30% decrease in voyage time between Europe and northwest Asia compared to traditional routes such as the Suez Canal. However, even during summer navigation, fragmented floating ice persists, generating stochastic ice loads on vessel bows and hulls through complex ship-to-ice interaction. For structural design, statistical extrapolation methods are required to accurately assess excessive areal bow/hull stresses. This study proposes a novel multi-modal structural damage risk assessment …

In-Situ And Laboratory Sound Velocities Of Unconsolidated Sediments In The Western South Korea Plateau Of The East Sea, Kiju Park, Gil Young Kim, Yuri Kim, Bo Yeon Yi, Nyeon Keon Kang, Gwang Soo Lee

Journal of Marine Science and Technology–Taiwan

The in-situ velocity of unconsolidated shelf sediments in the western South Korea Plateau of the East Sea was directly measured using the Korea Institute of Geoscience and Mineral Resources (KIGAM) Seafloor Acoustic Probe. Physical properties, including laboratory velocity, were also measured for core samples collected from the same location. The laboratory measurements were conducted at a temperature of 23℃ and under atmospheric pressure. Owing to the in-situ temperature and pressure (0.5–1.5℃ and 100–180 atm, respectively) at the sampling site, the laboratory velocity was adjusted to the in-situ conditions. In addition, a comparison with a theoretical prediction model (Biot-Stoll model) was …

Hydrographic Influences On Seasonal Variations In Zooplankton Communities Of Taiwan Bank (Southern Taiwan Strait), Bor-Shyr Chen, Frank Paolo Jay B. Albarico, Mark Ariel D. Malto, Aiza D. Gabriel, Chiu-Wen Chen, Cheng-Di Dong

Journal of Marine Science and Technology–Taiwan

Understanding the factors that control ocean productivity is crucial in fisheries management. Taiwan Bank, located between the Taiwan Strait and the South China Sea, is a highly productive ecosystem due to upwelling events. The total zooplankton community (holozooplankton and merozooplankton), diversity, seasonal changes, and environmental drivers remain unexplored despite its productivity. This study evaluates the seasonal and vertical environmental dynamics in the Taiwan Bank and their impacts on the zooplankton community structure. We collected zooplankton and basic water parameters in March, July, and September 2017 at 5, 25, and 50 meters. We recorded significant seasonal changes in zooplankton composition and …

Adaptive Evolution Shapes The Transmissibility Of West Nile Virus In New York State, Sean M. Bialosuknia

Electronic Theses & Dissertations (2024 - present)

Arthropod-borne viruses (arboviruses), which are maintained in nature in complex transmission cycles involving hematophagic invertebrates and their vertebrate hosts, are the cause of a significant and expanding global health burden. Defining arbovirus-host interactions is necessary if we are to understand the adaptive and epidemiological potential of arboviruses. The results presented with West Nile virus (WNV Flaviviridae: Orthoflavivirus), are a compilation of such studies. WNV is the most prevalent arboviral pathogen in the U.S. and the most geographically distributed arbovirus in the world. Despite the evolutionary potential of these RNA viruses, WNV and other arboviruses have experienced only limited …

Understanding Trends In Zostera Research, Stressors, And Response Variables, Hannah R. Lyford, Emma Guerrini Romano, Shayna A. Sura, Sarah Joy Bittick

Biology Faculty Works

Background. Seagrass meadows are ecologically significant habitats that are globally threatened. Thus, there is increased interest in conservation of seagrasses as they face widespread decline. Biotic and abiotic factors that influence seagrass can be classified as stressors, such as rising temperature and eutrophication. Our study met an imminent need to consolidate data from previous studies to discern knowledge gaps and identify trends in studies, stressors, species, and geographic origination of research for the genus Zostera. For our systematic review, the objectives were to (A) qualitatively assess and summarize the current state of literature focused on seagrass species within the Zostera …

Climate Change-Induced Shifts In Mediterranean Fungal Fruiting Phenology And Productivity, Rachel Demay

Theses and Dissertations

We used a 29-year dataset of mushroom fruiting from the Pinar Grande forest in northern Spain to investigate the effects of climate change on the phenology, productivity, and diversity of mycorrhizal and saprotrophic mushrooms. We investigated the long-term trends in fruiting season length, yield (by count, total weight, and average weight), and genus richness. Additionally, we identified associations between monthly temperature and monthly precipitation with these fungal responses across functional groups: mycorrhizal, saprotrophic, litter-decaying saprotrophic, and wood-decaying saprotrophic mushrooms, and the economically-important edible genera Boletus and Lactarius. We found that autumnal season length in the Pinar Grande has shortened over …

Scopolamine-Induced Modulation Of Serotonin And Dopamine Transporters Activity: Behavioral And Molecular Insights Into Rapid Antidepressant Action, Deepak Karunakaran

Theses and Dissertations

Major depressive disorder (MDD) affects over 350 million individuals worldwide and is characterized by profound dysregulation of serotonin (5-HT) and dopamine (DA) systems that govern mood, reward processing, and motivation. The serotonin transporter (SERT) and dopamine transporter (DAT), both dynamically regulated through phosphorylation, serve as critical determinants of synaptic monoamine signaling. Despite decades of therapeutic development, current antidepressants require 4-6 weeks to achieve efficacy, and approximately one-third to half of patients develop treatment-resistant depression. The emergence of rapid-acting antidepressants like ketamine represents a paradigmatic shift, demonstrating symptom relief within hours; however, ketamine's therapeutic potential remains constrained by abuse liability, dissociative …

Geology, Paleoecology And Vertebrate Biostratigraphy Of The Hell Creek Formation, Carter County, Montana, Usa, Joshua Collin Mathews

Graduate Research Theses & Dissertations

The Hell Creek Formation of the Northern Great Plains records one of the greatest mass extinction events in Earth’s history, bringing to a close the reign of the dinosaurs at the end of the Cretaceous period. This rock unit comprises one of the most studied geological formations in the world and is one of the few locations on the planet that preserve terrestrial deposits containing ejecta from the bolide impact that slammed into the Yucatan Peninsula 66 million years ago. This profound event in the geologic record has led to numerous studies of paleobiotas, climate change, ecosystem recovery dynamics, and …

Demographic Response Of Breeding Grassland Birds To Keystone Effects Of Black-Tailed Prairie Dogs, Richard Andrew Dreelin

Graduate Research Theses & Dissertations

Grassland birds are the most rapidly declining group of birds in North America due to a host of historical and recent changes to the Great Plains (Rosenberg et al., 2019; Bernath-Plaisted et al., 2023). Grassland birds evolved in a mosaic of heterogeneous habitats created by disturbance from keystone species and Indigenous peoples, and the suppression of disturbance by European settlement has resulted in more homogenous habitat and population declines in grassland birds (Knopf, 1994; Samson & Knopf, 1996; Vickery, Peter D. et al., 1998). Restoring the historical disturbance patterns and habitat heterogeneity forms the basis of management activities for grassland …

Remote Sensing - Based Mapping And Analysis Of Winter Cover Crop Adoption For Sustainable Agriculture, Minnehaha County, Belinda Buechler

Electronic Theses and Dissertations

Winter cover crops planted by farmers such as cereal rye, crimson clover, radishes, hairy vetch, and winter wheat are used to conserve and protect the soil during winter. These crops offer numerous benefits such as improving soil health, reducing erosion, fixing nitrogen, increasing carbon sequestration, and weed suppression. Over time, winter cover cropping has been recognized as a sustainable agricultural practice and has gained attention from Federal and State conservation programs, farmers, and non-governmental organizations. Due to their vital benefits, agencies such as the United States Department of Agriculture (USDA), Natural Resources Conversation Services (NRCS) have partnered with cost-share programs …

Bridging The Gap Between Plot-Level And Landscape-Scale Analysis For Wildfire Risk Assessment, Vanessa Leigh Niemczyk

Graduate Student Theses, Dissertations, & Professional Papers

Remote sensing technology has advanced greatly over the past couple of decades proving its ability to aid in wildfire risk assessment and improve our understanding of forest structure and fuel inventory across the landscape. While some aerial and satellite sensors perform better than others, they all have a common weakness, their reduced ability to capture understory fuels with high detail. Terrestrial laser scanning is an emerging solution due to its understory perspective. This research leverages the beneficial aspects of both terrestrial laser scanning and various aerial- or satellite-based remote sensing platforms (aerial laser scanning, digital aerial photogrammetry, and Sentinel-2) to …

Ineligible Partners: Tribal Nations And Cooperative Federalism In The Historical Development Of National Forest Law And Policy, James H. Baker

Graduate Student Theses, Dissertations, & Professional Papers

Lands within the National Forest System (NFS), like all federal public lands, are rooted in Aboriginal Title and were once exclusively inhabited by Indigenous peoples and communities. Through the process of treaty-making, the federal government amassed millions of acres of ceded Tribal lands, many of which are now managed by federal public land agencies, including 194 million acres managed by the U.S. Forest Service (USFS). Several Tribes reserved various use and property rights on these lands that are protected by the U.S. Constitution’s Treaty and Supremacy Clauses. The federal government also has an overarching trust obligation to Tribes – a …

Spatial Variation In Sexual Size Dimorphism And Mating Associations In The Color Polymorphic Eastern Red-Backed Salamander (Plethodon Cinereus), Maggie M. Hantak, Olivia L. Brooks, Kyle M. Brooks, Carl D. Anthony, Cari-Ann M. Hickerson, Kelly A. Williams, Shawn R. Kuchta

2025 Faculty Bibliography

Sexual selection due to mate preference for certain traits can maintain phenotypic diversity within populations and species. In taxa with discrete phenotypes, such as color polymorphic species, assortative mating may lead to disruptive selection and sympatric divergence, yet how such interactions vary over species' ranges remains poorly understood. To address this shortcoming, we examined spatial patterns of sexual size dimorphism and presumptive male–female mating pairs based on body size and coloration in the color polymorphic Eastern Red-backed Salamander, Plethodon cinereus. This species exhibits two common color morphs, striped and unstriped, that also differ in other elements of their biology, including …

The Nesting Ecology Of Southern Two-Lined Salamanders (Eurycea Cirrigera) In Urban Streams, Leah T. Rittenburg, Emma G. Downing, Todd Pierson

Faculty Articles

Urbanization alters many aspects of stream ecosystems, and its effects upon wildlife will likely increase as more watersheds become developed. This may be particularly true for species with complex life histories, which could be vulnerable in different life stages. Eurycea cirrigera (Green) (Southern Two-lined Salamanders) are common members of many stream communities in the southeastern United States, and they prefer to nest in cobble with little sedimentation—a microhabitat that is threatened by stream degradation. We collected data on the nesting ecology of this amphibian species in urban streams in Atlanta, Georgia, to evaluate microhabitat availability, nest-site selection, and the influence …

Weighted Family History Density Of Substance Use: Influence On Participant Substance Use Onset, Escalation, And Duration, Carleigh A. Litteral

Theses and Dissertations--Psychology

Substance use disorders impose a staggering toll on the United States (U.S.), straining healthcare systems, destabilizing communities, and profoundly impacting both individuals and families. Approximately one in six Americans aged 12 and older had a past-year substance use disorder in 2022 (Key Substance Use, 2022), and nearly one-third of adults experience a substance use disorder in their lifetime (Wu, 2010), contributing to an economic burden exceeding $400 billion annually (National Drug Threat Assessment, 2011). Family history of substance use disorders is a key predictor of vulnerability, with individuals who have affected relatives being 2–8 times more …

Analyzing The Population Structure Of The Rhizobia Associated With Astragalus Lentiginosus, Joshua Adam Melnick

Dissertations

Legumes are an incredibly diverse and agriculturally important family of plants. They have a special relationship with symbiotic bacteria known as rhizobia which fix nitrogen into ammonia within nodules on their roots. Astragalus is the largest plant genus on Earth, and the species Astragalus lentiginosus is extraordinarily diverse, consisting of approximately 40 varieties. However, the rhizobia of A. lentiginosus have never been studied. In this study, root nodules were extracted from 17 varieties of A. lentiginosus to obtain rhizobial strains and metagenomes. A. lentiginosus primarily associates with rhizobia from the genera Mesorhizobium and Allomesorhizobium. There was little evidence of horizontal …

Improved Survival And Decreased Cancer Deaths In Young Adults With Cancer After Passage Of The Affordable Care Act Dependent Coverage Expansion, Michael Roth, Clark R Andersen, Amy Berkman, Stuart Siegel, Branko Cuglievan, J Andrew Livingston, Michelle Hildebrandt, Jaime Estrada, Archie Bleyer

Faculty, Staff and Student Publications

Background: The Patient Protection and Affordable Care Act (ACA) allowed Americans aged 19-25 years to remain on their parents' health insurance plans until age 26 years (the Dependent Care Expansion [DCE]). Have those with cancer diagnoses benefited?

Methods: The ACE DCE 7-year age range of 19-25 years was compared for changes in cancer survival and mortality before and after enactment of the ACA with groups that were younger and older (in 7-year age spans: ages 12-18 and 26-32 years, respectively). Cancer death data for the entire United States were obtained from the Centers for Disease Control and Prevention, and relative …

Dose Planning And Radiation Optimization For Thoracic Conventional, Twice Daily, And Stereotactic Radiation Therapy: A Delphi Consensus From A National Survey Of Practitioners, Julius Weng, Jeff Ryckman, Matthew S Katz, Hina Saeed, Christopher Estes, Issam El Naqa, Amy Moreno, Sue S Yom

Faculty, Staff and Student Publications

Purpose: We sent surveys to a large number of radiation oncologists with active thoracic cancer practices and applied the Delphi method over 3 rounds to generate consensus dose-volume histogram metrics. We used these results to create consensus-based organs-at-risk dose constraints and target goal templates for practical implementation.

Methods and materials: In this institutional review board-approved study, data were collected using REDCap electronic data capture on a secure server. Radiation oncologists identified from the Accreditation Council for Graduate Medical Education-accredited departments' websites were asked to confirm their self-identification as thoracic radiation oncologists and nominate other respondents. All invitees were asked to …

Earth Observations Reveal Impacts Of Climate Variability On Maize Cropping Systems In Sub-Saharan Africa, Adomas Liepa, Michael Thiel, Hannes Taubenböck, Doris Klein, Ingolf Steffan-Dewenter, Marcell K. Peters, Sarah Schönbrodt-Stitt, Insa Otte, Tobias Landmann, Zeyaur R. Khan, Michael Ochieng Obondo, Frank Chidawanyika, Emily A. Martin, Tobias Ullmann

All Peer-Reviewed Publications

In Kenya, climate variability and change threaten smallholder, rainfed farms, with crop failures, yield reductions, and pest infestations. Efficient agroecological strategies, such as Push-Pull intercropping, offer documented benefits including pest control, improved soil fertility, and water conservation compared to traditional maize monocropping. To date, no studies exist comparing traditional maize monocropping and Push-Pull intercropping using earth observation tools over several growing seasons in East Africa. Our research addresses this by harmonizing Landsat 7, 8, 9 with Sentinel-2 remote sensing time series from 2016 to 2023. Phenological metrics of 15 growing seasons are extracted based on a threshold method using the …

The Role Of Information And Communication Technologies-Based Extension In Agriculture: Application, Opportunities And Challenges, Kelvin Mulungu, Menale Kassie, Maurice Tschopp

All Peer-Reviewed Publications

Limited access to information about new technologies is a major barrier to agricultural productivity. To bridge this information gap, agricultural extension services increasingly use Information and Communication Technologies (ICTs) to provide timely and actionable information to farmers. This systematic review analyses evidence from 49 studies examining the impact of ICT interventions including mobile apps, SMS messaging, educational videos, and voice calling services on awareness, agricultural practices adoption, yields, and income. The review reveals that 76% of studies reported increased adoption of good agricultural practices, 60% demonstrated improved awareness, 74% indicated higher yields, and 68% observed enhanced incomes. Cereals, particularly maize, …

Exploring Dynamics And Effective Strategies For Tidal Flood Risk Reduction In Indonesia's Coastal Cities, Satria Yudha Adhitama, Diana Puspitasari, Lucia Sandra Budiman, Azis Musthofa

ASEAN Journal on Science and Technology for Development

Indonesia’s coastal regions have distinct charateristics. However, nearly all of these coastal regions are vulnerable to tidal floods. The purpose of this study is to determine the features of coastal regions in Indonesia that have been damaged by tidal floods, as well as the actions implemented to mitigate disaster risk. Thus study takes a qualitiative method with explanatory analysis. The Island Spatial Planning is used to classify Indonesia’s archipelagic regions.An urban area vulnerable to tidal flood was selected from each archipelagic region. The characteristics of coastal regions affected by tidal flood were identified by the tidal flood characteristics, coastal physiography. …

A Scoping Review Of Population Diversity In The Common Genomic Aberrations Of Clear Cell Renal Cell Carcinoma, Sean S. Kumar, Ninad Khandekar, Komal Dani, Saina R. Bhatt, Vinay Duddalwar, Anishka D' Souza

Department of Medicine Faculty Publications

Introduction: Previous literature has shown that clear cell renal cell carcinoma (ccRCC) is becoming a more prevalent diagnosis and that the incidence and mortality differ both regionally and racially. While the molecular profiles for ccRCC are studied regionally through biopsy and sequencing techniques, the genomic landscape and ccRCC diversity data are not well studied. We conducted a review of the known genomic data on 6 of the most clinically relevant DNA biomarkers in ccRCC: von Hippel-Lindau (vHL), Polybromo-1 (PBRM1), Breast Cancer Gene 1-Associated Protein 1 (BAP1), Histone-Lysine N-Methyltransferase Domain-Containing 2 (SETD2), Mammalian Target of Rapamycin (mTOR), and Lysine-Specific Demethylase 5C …

Tree Crown Economics Of Broadleaf Deciduous Forests, Yiting Fan

Graduate Theses, Dissertations, and Problem Reports (ETD)

Tree crown architecture, a critical determinant of forest ecosystem processes such as photosynthesis, evapotranspiration, and spectral reflectance, is shaped by adaptive trade-offs in resource use and environmental responses. However, significant gaps remain in our understanding of how these traits vary across species, environmental gradients, and temporal scales. This dissertation addresses these gaps by employing remote sensing data across three interconnected studies. Together, these studies advance tree crown economic theory, highlighting how crown traits mediate trade-offs between light capture and water-use efficiency and how these traits influence forest responses to global change. Collectively, this dissertation offer insights for improving models that …

Genomic Differences And Parentage In West Virginia's Reintroduced Elk (Cervus Canadensis), Adam A.V. Cook

Graduate Theses, Dissertations, and Problem Reports (ETD)

Elk (Cervus canadensis) reintroductions have been common in the 20th and 21st centuries, yet 40% have failed to establish self-sustaining elk populations due to a lack of post-reintroduction demographic monitoring. Elk were reintroduced to West Virginia in 2016 following more than a century of absence after the species was extirpated in 1875. Elk were translocated to West Virginia from Land Between the Lakes National Recreation Area (LBL) in eastern Kentucky and from Arizona. The two groups of elk differ in their subspecies, physiology, reintroduction history, connectivity, and habitat. Reintroductions create genetic risks such as the founder effect and …